| Clone Name | rbags21n06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CAH2_CHLRE (P24258) Carbonic anhydrase 2 precursor (EC 4.2.1.1) ... | 32 | 1.7 | 2 | RL12_HALVO (P41197) 50S ribosomal protein L12P ('A' type) | 30 | 6.6 | 3 | CBX4_HUMAN (O00257) Chromobox protein homolog 4 (Polycomb 2 homo... | 30 | 8.6 |
|---|
>CAH2_CHLRE (P24258) Carbonic anhydrase 2 precursor (EC 4.2.1.1) (Carbonate| dehydratase 2) (CA2) [Contains: Carbonic anhydrase 2 large chain; Carbonic anhydrase 2 small chain] Length = 380 Score = 32.0 bits (71), Expect = 1.7 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = +2 Query: 359 HHRHPYRRLLHNHLH 403 HH H +RRLLHNH H Sbjct: 310 HHHHHHRRLLHNHAH 324
>RL12_HALVO (P41197) 50S ribosomal protein L12P ('A' type)|
Length = 113
Score = 30.0 bits (66), Expect = 6.6
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -2
Query: 485 KQMIKEKKIIDVLLSAETAEAQFFLF*GGDDYAEVVYRDDDDEMDSTEMRGSGIGEAMGG 306
K ++ + +D+ + ETA A GG EV DDDDE D+ E G+ G
Sbjct: 39 KALVAALEDVDIEEAIETAAAAPAPAAGGSAGGEVEAADDDDEEDAEEEAADEGGDDDGD 98
Query: 305 DE 300
D+
Sbjct: 99 DD 100
>CBX4_HUMAN (O00257) Chromobox protein homolog 4 (Polycomb 2 homolog) (Pc2)| (hPc2) Length = 558 Score = 29.6 bits (65), Expect = 8.6 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +2 Query: 353 PSHHRHPYRRLLHNHLHPRKEKIELQLS 436 PSHH HP+ H+H H + L LS Sbjct: 378 PSHHPHPHPHHHHHHHHHHHHAVGLNLS 405 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,707,450 Number of Sequences: 219361 Number of extensions: 1386497 Number of successful extensions: 4521 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4305 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4499 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)