ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags21n06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC146300.4| Mus musculus BAC clone RP23-38L11 from 3, complete sequence Length = 261825 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 66 ttccacaagaacacacacacagac 89 |||||||||||||||||||||||| Sbjct: 130374 ttccacaagaacacacacacagac 130397
>ref|XM_322828.1| Neurospora crassa OR74A hypothetical protein (NCU03571.1) partial mRNA Length = 2769 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 458 tgatcttcttctccttgatcatttgcttctt 488 ||||||||||||||||||| || |||||||| Sbjct: 1039 tgatcttcttctccttgatgatgtgcttctt 1009
>ref|XM_950917.1| Neurospora crassa OR74A hypothetical protein (NCU03571.1) partial mRNA Length = 2769 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 458 tgatcttcttctccttgatcatttgcttctt 488 ||||||||||||||||||| || |||||||| Sbjct: 1039 tgatcttcttctccttgatgatgtgcttctt 1009
>emb|BX284746.1|NCB23I4 Neurospora crassa DNA linkage group II BAC contig B23I4 Length = 71047 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 458 tgatcttcttctccttgatcatttgcttctt 488 ||||||||||||||||||| || |||||||| Sbjct: 51292 tgatcttcttctccttgatgatgtgcttctt 51322
>gb|AC161229.10| Mus musculus chromosome 7, clone RP24-88J19, complete sequence Length = 189105 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 553 tttcttttctatgtatgaatactttcaaag 582 ||||||||||| ||||||| |||||||||| Sbjct: 65153 tttcttttctaggtatgaaaactttcaaag 65124
>gb|AY573571.1| Populus tremula x Populus tremuloides cellulose synthase (CesA1) mRNA, complete cds Length = 3472 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 460 atcttcttctccttgatcattt 481 |||||||||||||||||||||| Sbjct: 698 atcttcttctccttgatcattt 677
>gb|AC044873.13| Homo sapiens chromosome 18, clone RP11-715C4, complete sequence Length = 179454 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 aaaagaaaaaattgagcttcag 430 |||||||||||||||||||||| Sbjct: 41267 aaaagaaaaaattgagcttcag 41288
>gb|AC016839.12| Homo sapiens chromosome 18, clone RP11-399L5, complete sequence Length = 152689 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 211 tcctcatcatcaaactcctcttcttc 236 |||||||||||||| ||||||||||| Sbjct: 92489 tcctcatcatcaaaatcctcttcttc 92464
>dbj|AK125010.1| Homo sapiens cDNA FLJ43020 fis, clone BRTHA2018504 Length = 3396 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 553 tttcttttctatgtatgaatactttcaaag 582 ||||||||||| ||||||| |||||||||| Sbjct: 3306 tttcttttctaggtatgaaaactttcaaag 3335
>emb|CR592099.1| full-length cDNA clone CS0DC026YC15 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1694 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 553 tttcttttctatgtatgaatactttcaaag 582 ||||||||||| ||||||| |||||||||| Sbjct: 1628 tttcttttctaggtatgaaaactttcaaag 1657
>ref|NM_075592.2| Caenorhabditis elegans MoLTing defective family member (mlt-11) (mlt-11) mRNA, complete cds Length = 6853 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 211 tcctcatcatcaaactcctcttcttcagaatcaa 244 ||||||||||| |||||||||||| |||||||| Sbjct: 4340 tcctcatcatcgtactcctcttcttgagaatcaa 4307
>gb|AC007879.4| Homo sapiens BAC clone RP11-309L6 from 2, complete sequence Length = 158841 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 acaaatcaaaaaggggaaattc 68 |||||||||||||||||||||| Sbjct: 46875 acaaatcaaaaaggggaaattc 46854
>gb|AF081534.1|AF081534 Populus x canescens cellulose synthase (cel1) mRNA, complete cds Length = 3395 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 460 atcttcttctccttgatcattt 481 |||||||||||||||||||||| Sbjct: 614 atcttcttctccttgatcattt 593
>emb|AJ324497.1|HSA324497 Homo sapiens genomic sequence surrounding NotI site, clone NR1-MA9C Length = 623 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 aaaagaaaaaattgagcttcag 430 |||||||||||||||||||||| Sbjct: 180 aaaagaaaaaattgagcttcag 201
>emb|Z92815.1|CEW01F3 Caenorhabditis elegans Cosmid W01F3, complete sequence Length = 32797 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 211 tcctcatcatcaaactcctcttcttcagaatcaa 244 ||||||||||| |||||||||||| |||||||| Sbjct: 26050 tcctcatcatcgtactcctcttcttgagaatcaa 26017
>dbj|AP001148.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-762L8, complete sequences Length = 169340 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 553 tttcttttctatgtatgaatactttcaaag 582 ||||||||||| ||||||| |||||||||| Sbjct: 54426 tttcttttctaggtatgaaaactttcaaag 54455
>emb|X54171.1|HSNG26 H.sapiens NG2-6 DNA Length = 6221 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 211 tcctcatcatcaaactcctcttcttc 236 |||||||||||||| ||||||||||| Sbjct: 5136 tcctcatcatcaaaatcctcttcttc 5111
>emb|AJ343088.1|HSA343088 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XF21RS Length = 949 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 aaaagaaaaaattgagcttcag 430 |||||||||||||||||||||| Sbjct: 180 aaaagaaaaaattgagcttcag 201
>emb|AJ343854.1|HSA343854 Homo sapiens genomic sequence surrounding NotI site, clone NL4-DB1R Length = 761 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 aaaagaaaaaattgagcttcag 430 |||||||||||||||||||||| Sbjct: 180 aaaagaaaaaattgagcttcag 201
>emb|AJ343763.1|HSA343763 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XF20R Length = 696 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 aaaagaaaaaattgagcttcag 430 |||||||||||||||||||||| Sbjct: 180 aaaagaaaaaattgagcttcag 201
>emb|AJ343758.1|HSA343758 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XK3R Length = 684 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 aaaagaaaaaattgagcttcag 430 |||||||||||||||||||||| Sbjct: 180 aaaagaaaaaattgagcttcag 201
>gb|AC165077.3| Mus musculus BAC clone RP24-369J8 from chromosome 7, complete sequence Length = 179228 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 553 tttcttttctatgtatgaatactttcaaag 582 ||||||||||| ||||||| |||||||||| Sbjct: 176057 tttcttttctaggtatgaaaactttcaaag 176028
>ref|XM_632924.1| Dictyostelium discoideum helicase (DDB0191460), partial mRNA Length = 4164 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 atcaaattcttcttcttcata 260 ||||||||||||||||||||| Sbjct: 1284 atcaaattcttcttcttcata 1264
>ref|XM_520142.1| PREDICTED: Pan troglodytes similar to Acidic leucine-rich nuclear phosphoprotein 32 family member B (PHAPI2 protein) (Silver-stainable protein SSP29) (Acidic protein rich in leucines) (LOC464605), mRNA Length = 995 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 776 tcatcaaactcctcttcttca 756
>gb|AF067054.1| Sus scrofa microsatellite Li3 sequence Length = 362 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 aggggaaattccacaagaacacacacaca 86 |||||||||| ||||| |||||||||||| Sbjct: 244 aggggaaattacacaacaacacacacaca 216
>gb|BC013003.2| Homo sapiens acidic (leucine-rich) nuclear phosphoprotein 32 family, member B, mRNA (cDNA clone MGC:3861 IMAGE:3010189), complete cds Length = 1026 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 756 tcatcaaactcctcttcttca 736
>gb|AC134546.4| Mus musculus BAC clone RP24-471H17 from chromosome 18, complete sequence Length = 208921 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 cacaagaacacacacacagac 89 ||||||||||||||||||||| Sbjct: 8863 cacaagaacacacacacagac 8843
>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7 Length = 684973 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttccacaagaacacacacaca 86 ||||||||||||||||||||| Sbjct: 157507 ttccacaagaacacacacaca 157487
>ref|XM_535878.2| PREDICTED: Canis familiaris similar to RIO kinase 1 isoform 1 (LOC478713), mRNA Length = 1893 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 208 tcctcctcatcatcaaactcctcttcttc 236 |||||||| |||||| ||||||||||||| Sbjct: 386 tcctcctcctcatcatactcctcttcttc 358
>gb|AC138452.10| Medicago truncatula clone mth2-17p11, complete sequence Length = 127710 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 575 tttcaaaggtactccaatttctttc 599 ||||||||| ||||||||||||||| Sbjct: 13118 tttcaaaggcactccaatttctttc 13094
>gb|AC147430.9| Medicago truncatula clone mth2-71e6, complete sequence Length = 125478 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 575 tttcaaaggtactccaatttctttc 599 ||||||||| ||||||||||||||| Sbjct: 94733 tttcaaaggcactccaatttctttc 94709
>gb|BC072005.1| Homo sapiens cDNA clone IMAGE:3356831, **** WARNING: chimeric clone **** Length = 1650 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 1039 tcatcaaactcctcttcttca 1019
>gb|BC008762.1| Homo sapiens mRNA similar to RIKEN cDNA 0610033L19 gene (cDNA clone IMAGE:3349806) Length = 3768 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 3188 tcatcaaactcctcttcttca 3168
>gb|AY330169.1| Cyprinus carpio nucleolin gene, complete cds Length = 8850 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 207 ctcctcctcatcatcaaactcctcttcttcaga 239 |||||||||||||||| |||||||||||||| Sbjct: 2755 ctcctcctcatcatcatcatcctcttcttcaga 2723
>ref|NM_006401.1| Homo sapiens acidic (leucine-rich) nuclear phosphoprotein 32 family, member B (ANP32B), mRNA Length = 1475 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 785 tcatcaaactcctcttcttca 765
>emb|AL441985.9| Human DNA sequence from clone RP11-417D4 on chromosome X Contains a pseudogene similar to part of ubiquitin-conjugating enzyme E2, complete sequence Length = 185969 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aaatgcatctcctcctcatca 219 ||||||||||||||||||||| Sbjct: 113869 aaatgcatctcctcctcatca 113889
>gb|AY330168.1| Cyprinus carpio nucleolin 3 mRNA, complete cds Length = 2595 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 207 ctcctcctcatcatcaaactcctcttcttcaga 239 |||||||||||||||| |||||||||||||| Sbjct: 633 ctcctcctcatcatcatcatcctcttcttcaga 601
>gb|AY330167.1| Cyprinus carpio nucleolin 2 mRNA, complete cds Length = 2619 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 207 ctcctcctcatcatcaaactcctcttcttcaga 239 |||||||||||||||| |||||||||||||| Sbjct: 633 ctcctcctcatcatcatcatcctcttcttcaga 601
>emb|AL354726.17| Human DNA sequence from clone RP11-535C21 on chromosome 9 Contains 5' end of HEMGN gene for hemogen, the ANP32B gene for acidic (leucine-rich) nuclear phosphoprotein 32 family, member B and a CpG island, complete sequence Length = 82316 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 70816 tcatcaaactcctcttcttca 70796
>gb|AY077975.1| Phyllospadix torreyi tRNA-Lys (trnK) gene, intron; chloroplast gene for chloroplast product Length = 467 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 atctccaccctagaaaagaaaaaat 420 |||||||| |||||||||||||||| Sbjct: 362 atctccactctagaaaagaaaaaat 338
>emb|AL646055.10| Mouse DNA sequence from clone RP23-382C18 on chromosome 11 Contains a aldo-keto reductase family 1 member B3 (aldose reductase) (Akr1b3) pseudogene, the gene for a novel protein similar to human methionine adenosyltransferase II beta (MAT2B), the Hmmr gene for hyaluronan mediated motility receptor (RHAMM), the gene for a novel protein (D11Ertd603e), the Ccng1 gene for cyclin G1 and three CpG islands, complete sequence Length = 193551 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cataatgacaaagacatacaa 119 ||||||||||||||||||||| Sbjct: 27774 cataatgacaaagacatacaa 27794
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 ctcctcttcttcagaatcaaa 245 ||||||||||||||||||||| Sbjct: 839 ctcctcttcttcagaatcaaa 819
>gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O11, complete sequence Length = 70347 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 caaattcttcttcttcataaagttg 266 |||||||||||| |||||||||||| Sbjct: 55016 caaattcttcttattcataaagttg 54992
>emb|CR616535.1| full-length cDNA clone CS0DI034YC12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1297 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 754 tcatcaaactcctcttcttca 734
>emb|CR595726.1| full-length cDNA clone CS0DJ012YF08 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1082 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 552 tcatcaaactcctcttcttca 532
>ref|XM_625985.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_210), partial mRNA Length = 3258 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 208 tcctcctcatcatcaaactcctcttcttc 236 ||||||||||||||| |||||||||||| Sbjct: 358 tcctcctcatcatcatcctcctcttcttc 386
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 accataattcttgagtttaat 510 ||||||||||||||||||||| Sbjct: 9349320 accataattcttgagtttaat 9349340
>gb|AY939844.1| Cyanophage P-SSM2, complete genome Length = 252401 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 463 ttcttctccttgatcatttgcttct 487 |||||| |||||||||||||||||| Sbjct: 132082 ttcttcaccttgatcatttgcttct 132058
>gb|AC009981.6|AC009981 Drosophila melanogaster, chromosome 3R, region 97C-97D, BAC clone BACR24O14, complete sequence Length = 170356 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cacaagaacacacacacagac 89 ||||||||||||||||||||| Sbjct: 994 cacaagaacacacacacagac 1014
>gb|AC008215.5|AC008215 Drosophila melanogaster, chromosome 3R, region 97C-97C, BAC clone BACR08N03, complete sequence Length = 165439 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cacaagaacacacacacagac 89 ||||||||||||||||||||| Sbjct: 137712 cacaagaacacacacacagac 137732
>dbj|AK223454.1| Homo sapiens mRNA for acidic (leucine-rich) nuclear phosphoprotein 32 family, member B variant, clone: FCC114H04 Length = 1098 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 791 tcatcaaactcctcttcttca 771
>gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculentum Clone T62O11, complete sequence Length = 70497 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 caaattcttcttcttcataaagttg 266 |||||||||||| |||||||||||| Sbjct: 55016 caaattcttcttattcataaagttg 54992
>gb|AC011661.5|AC011661 Genomic sequence for Arabidopsis thaliana BAC T23J18 from chromosome I, complete sequence Length = 84797 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 caagagagttgagatgttctg 541 ||||||||||||||||||||| Sbjct: 52593 caagagagttgagatgttctg 52573
>gb|AC068338.14| Homo sapiens chromosome 15, clone RP11-817O13, complete sequence Length = 174192 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 53804 tcatcaaactcctcttcttca 53784
>gb|AC105137.17| Homo sapiens chromosome 15, clone CTD-2562G15, complete sequence Length = 178059 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 18572 tcatcaaactcctcttcttca 18592
>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011J03 Length = 176461 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 accataattcttgagtttaat 510 ||||||||||||||||||||| Sbjct: 109574 accataattcttgagtttaat 109594
>gb|U70439.1|HSU70439 Human silver-stainable protein SSP29 mRNA, complete cds Length = 1475 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 785 tcatcaaactcctcttcttca 765
>emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on chromosome 14, complete sequence Length = 170436 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 tagtcattctcatcctctaaa 201 ||||||||||||||||||||| Sbjct: 16900 tagtcattctcatcctctaaa 16880
>gb|AE003757.2| Drosophila melanogaster chromosome 3R, section 95 of 118 of the complete sequence Length = 191834 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cacaagaacacacacacagac 89 ||||||||||||||||||||| Sbjct: 146243 cacaagaacacacacacagac 146263
>dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-23I22, complete sequence Length = 152472 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 acaaagacatacaagataaag 126 ||||||||||||||||||||| Sbjct: 98399 acaaagacatacaagataaag 98419
>emb|BX000344.15| Mouse DNA sequence from clone RP24-88L6 on chromosome 2, complete sequence Length = 118767 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttccacaagaacacacacaca 86 ||||||||||||||||||||| Sbjct: 3508 ttccacaagaacacacacaca 3488
>gb|BC019658.1| Homo sapiens acidic (leucine-rich) nuclear phosphoprotein 32 family, member B, mRNA (cDNA clone MGC:25053 IMAGE:4478860), complete cds Length = 1371 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 763 tcatcaaactcctcttcttca 743
>emb|CT485774.1| Xenopus tropicalis finished cDNA, clone TNeu136g19 Length = 776 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 atccatctcatcatcgtcatc 371 ||||||||||||||||||||| Sbjct: 353 atccatctcatcatcgtcatc 333
>gb|U66059.1| Human germline T-cell receptor beta chain Dopamine-beta-hydroxylase-like, TRY1, TRY2, TRY3, TCRBV27S1P, TCRBV22S1A2N1T, TCRBV9S1A1T, TCRBV7S1A1N2T, TCRBV5S1A1T, TCRBV13S3, TCRBV6S7P, TCRBV7S3A2T, TCRBV13S2A1T, TCRBV9S2A2PT, TCRBV7S2A1N4T, TCRBV13S9/13S2A1T, TCRBV6S5A1N1, TCRBV30S1P, TCRBV31S1, TCRBV13S5, TCRBV6S1A1N1, TCRBV32S1P, TCRBV5S5P, TCRBV1S1A1N1, TCRBV12S2A1T, TCRBV21S1, TCRBV8S4P, TCRBV12S3, TCRBV21S3A2N2T, TCRBV8S5P, TCRBV13S1 genes from bases 1 to 267156 (section 1 of 3) Length = 267156 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttccacaagaacacacacaca 86 ||||||||||||||||||||| Sbjct: 157507 ttccacaagaacacacacaca 157487
>emb|AL807814.5| Mouse DNA sequence from clone RP23-392I19 on chromosome X, complete sequence Length = 173965 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ccacaagaacacacacacaga 88 ||||||||||||||||||||| Sbjct: 72383 ccacaagaacacacacacaga 72403
>emb|Y07570.1|HSPHAPI2B H.sapiens mRNA for PHAPI2b protein Length = 1293 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 759 tcatcaaactcctcttcttca 739
>emb|Y07569.1|HSPHAPI2A H.sapiens mRNA for PHAPI2a protein Length = 1011 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 630 tcatcaaactcctcttcttca 610
>emb|Y07969.1|HSAPRIL H.sapiens mRNA for APRIL protein Length = 1371 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcatcaaactcctcttcttca 237 ||||||||||||||||||||| Sbjct: 799 tcatcaaactcctcttcttca 779
>ref|NM_118526.2| Arabidopsis thaliana ATP binding / ATPase/ metalloendopeptidase/ metallopeptidase/ nucleoside-triphosphatase/ nucleotide binding AT4G23940 mRNA, complete cds Length = 2968 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 tcaaactcctcttcttcaga 239 |||||||||||||||||||| Sbjct: 509 tcaaactcctcttcttcaga 490
>gb|AY374485.1| Tetraodon nigroviridis class I helical cytokine receptor member 13 (CRFA13) mRNA, complete cds Length = 2390 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 tcaaactcctcttcttcaga 239 |||||||||||||||||||| Sbjct: 1292 tcaaactcctcttcttcaga 1273
>ref|XM_632391.1| Dictyostelium discoideum hypothetical protein (DDB0187208), partial mRNA Length = 3333 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atcaaattcttcttcttcat 259 |||||||||||||||||||| Sbjct: 1701 atcaaattcttcttcttcat 1682
>ref|XM_634957.1| Dictyostelium discoideum hypothetical protein (DDB0204757), partial mRNA Length = 672 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 cagaatcaaattcttcttcttcat 259 ||||||||| |||||||||||||| Sbjct: 64 cagaatcaagttcttcttcttcat 41
>ref|XM_630357.1| Dictyostelium discoideum hypothetical protein (DDB0189208), partial mRNA Length = 2892 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atcaaattcttcttcttcat 259 |||||||||||||||||||| Sbjct: 2886 atcaaattcttcttcttcat 2867
>ref|XM_518273.1| PREDICTED: Pan troglodytes similar to Geminin (LOC462477), mRNA Length = 2136 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 2042 tcttcttcagaatcaaattc 2023
>ref|XM_468628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4962 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 cctagaaaagaaaaaattga 423 |||||||||||||||||||| Sbjct: 3733 cctagaaaagaaaaaattga 3752
>gb|AC109201.12| Mus musculus chromosome 15, clone RP23-18P10, complete sequence Length = 213493 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 gtctcacaaatcaaaaaggggaaa 65 |||||||||| ||||||||||||| Sbjct: 140443 gtctcacaaaacaaaaaggggaaa 140466
>gb|AC170164.1| Homo sapiens chromosome 2 clone WI2-3444K5, complete sequence Length = 40088 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 34380 tttgtagagtcggtgcttca 34361
>gb|AC154279.2| Mus musculus BAC clone RP24-271E12 from chromosome 17, complete sequence Length = 173729 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tccacaagaacacacacaca 86 |||||||||||||||||||| Sbjct: 58964 tccacaagaacacacacaca 58983
>gb|AF016417.1| Caenorhabditis elegans cosmid F17A9, complete sequence Length = 20960 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 aaattcttcttcttcataaa 262 |||||||||||||||||||| Sbjct: 12245 aaattcttcttcttcataaa 12226
>gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, complete sequence Length = 171061 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tctctgtactatccatctca 360 |||||||||||||||||||| Sbjct: 29503 tctctgtactatccatctca 29522
>gb|AC132134.2| Mus musculus BAC clone RP23-267P6 from chromosome 5, complete sequence Length = 227078 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tccacaagaacacacacaca 86 |||||||||||||||||||| Sbjct: 136837 tccacaagaacacacacaca 136856
>gb|AC134332.2| Mus musculus BAC clone RP24-385N13 from chromosome 1, complete sequence Length = 124525 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 acaagagagttgagatgttc 539 |||||||||||||||||||| Sbjct: 106668 acaagagagttgagatgttc 106687
>ref|XM_654747.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2235.2), mRNA Length = 738 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ccatctcatcatcgtcatcc 372 |||||||||||||||||||| Sbjct: 634 ccatctcatcatcgtcatcc 615
>gb|AC159707.2| Mus musculus chromosome 1, clone RP24-176K12, complete sequence Length = 79081 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 acaagagagttgagatgttc 539 |||||||||||||||||||| Sbjct: 41694 acaagagagttgagatgttc 41675
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 cctagaaaagaaaaaattga 423 |||||||||||||||||||| Sbjct: 16721178 cctagaaaagaaaaaattga 16721197 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 ctcacttatcaatatagtcattct 190 ||||||||||||||| |||||||| Sbjct: 1746939 ctcacttatcaatatcgtcattct 1746962
>ref|XM_994119.1| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC624165), mRNA Length = 1171 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 226 tcctcttcttcagaatcaaattcttcttcttc 257 |||||||||||| ||||| |||||||||||| Sbjct: 649 tcctcttcttcaaaatcatcttcttcttcttc 618
>ref|XM_907784.2| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC633387), mRNA Length = 736 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 226 tcctcttcttcagaatcaaattcttcttcttc 257 |||||||||||| ||||| |||||||||||| Sbjct: 649 tcctcttcttcaaaatcatcttcttcttcttc 618
>ref|XM_890841.2| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38), transcript variant 1 (LOC624165), mRNA Length = 1171 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 226 tcctcttcttcagaatcaaattcttcttcttc 257 |||||||||||| ||||| |||||||||||| Sbjct: 649 tcctcttcttcaaaatcatcttcttcttcttc 618
>gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 map q32, complete sequence Length = 137003 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ctctccaatgccacttcctc 337 |||||||||||||||||||| Sbjct: 89653 ctctccaatgccacttcctc 89672
>ref|XM_752282.1| Ustilago maydis 521 hypothetical protein (UM01228.1) partial mRNA Length = 2007 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 207 ctcctcctcatcatcaaactcctcttct 234 ||||||||||||| ||||||| |||||| Sbjct: 126 ctcctcctcatcaccaaactcttcttct 99
>emb|AJ893357.1| Phytophthora infestans, clone PI-BAC-49P21 Length = 137298 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ttcttcttcttcataaagtt 265 |||||||||||||||||||| Sbjct: 19598 ttcttcttcttcataaagtt 19579
>ref|XM_390260.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10084.1) partial mRNA Length = 12666 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 atgacaaagacatacaagat 122 |||||||||||||||||||| Sbjct: 6137 atgacaaagacatacaagat 6156
>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15, complete sequence Length = 179357 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ctcttcttcagaatcaaatt 247 |||||||||||||||||||| Sbjct: 163623 ctcttcttcagaatcaaatt 163642
>gb|AC129016.4| Mus musculus BAC clone RP24-389J11 from chromosome 10, complete sequence Length = 160180 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 226 tcctcttcttcagaatcaaattcttcttcttc 257 |||||||||||| ||||| |||||||||||| Sbjct: 69606 tcctcttcttcaaaatcatcttcttcttcttc 69637
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atcaaattcttcttcttcat 259 |||||||||||||||||||| Sbjct: 108421 atcaaattcttcttcttcat 108402 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atcaaattcttcttcttcat 259 |||||||||||||||||||| Sbjct: 108397 atcaaattcttcttcttcat 108378
>gb|AC138342.11| Mus musculus chromosome 12, clone RP23-37C23, complete sequence Length = 208939 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 31 ttggaagacttgtctcacaaatcaaaaa 58 ||||||||||||||||| ||| |||||| Sbjct: 7509 ttggaagacttgtctcaaaaaacaaaaa 7536
>gb|AC121572.2| Mus musculus BAC clone RP23-234P16 from 5, complete sequence Length = 136697 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tccacaagaacacacacaca 86 |||||||||||||||||||| Sbjct: 6491 tccacaagaacacacacaca 6510
>gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genomic sequence, complete sequence Length = 129167 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 cctagaaaagaaaaaattga 423 |||||||||||||||||||| Sbjct: 71971 cctagaaaagaaaaaattga 71990
>gb|BC020061.1| Mus musculus geminin, mRNA (cDNA clone MGC:28184 IMAGE:3988065), complete cds Length = 1145 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 811 tcttcttcagaatcaaattc 792
>emb|AL133264.10| Human DNA sequence from clone RP3-369A17 on chromosome 6p22.1-22.3 Contains the 5' end of gene FLJ12619 (DKFZP564G182), a sigma 1 subunit adaptor-related protein complex 3 (AP3S1) (CLAPS3,Sigma3A) pseudogene and gene geminin (LOC51053). Contains 3 CpG islands, complete sequence Length = 83820 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 71776 tcttcttcagaatcaaattc 71757
>emb|AL080285.6|HSJ344J20 Human DNA sequence from clone RP3-344J20 on chromosome 6q16.1-16.3 Contains an arginase, type II (ARG2) pseudogene and a peroxiredoxin 2 (thiol-specific antioxidant 1, natural killer-enhancing factor B, thioredoxin-dependent peroxide reductase 1, thiol-specific antioxidant 1, natural killer-enhancing factor)(PRDX2)(PRP, TSA, NKEFB, TDPX1) pseudogene, complete sequence Length = 170803 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 attctcacaaccatcctttg 650 |||||||||||||||||||| Sbjct: 143934 attctcacaaccatcctttg 143953
>ref|XM_784155.1| PREDICTED: Strongylocentrotus purpuratus similar to TBP-associated factor 2 (LOC584290), partial mRNA Length = 2790 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 actatccatctcatcatcgtcatc 371 ||||||||| |||||||||||||| Sbjct: 2790 actatccatatcatcatcgtcatc 2767
>ref|XM_788328.1| PREDICTED: Strongylocentrotus purpuratus similar to TBP-associated factor 2 (LOC588654), mRNA Length = 837 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 actatccatctcatcatcgtcatc 371 ||||||||| |||||||||||||| Sbjct: 294 actatccatatcatcatcgtcatc 271
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60 Length = 196677 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 tcaaactcctcttcttcaga 239 |||||||||||||||||||| Sbjct: 97001 tcaaactcctcttcttcaga 96982
>emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A16 (ESSA project) Length = 89826 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 tcaaactcctcttcttcaga 239 |||||||||||||||||||| Sbjct: 47095 tcaaactcctcttcttcaga 47076
>gb|BC005389.1| Homo sapiens geminin, DNA replication inhibitor, mRNA (cDNA clone MGC:12517 IMAGE:3996265), complete cds Length = 1224 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 850 tcttcttcagaatcaaattc 831
>gb|BC005185.1| Homo sapiens geminin, DNA replication inhibitor, mRNA (cDNA clone MGC:12176 IMAGE:4101771), complete cds Length = 1223 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 798 tcttcttcagaatcaaattc 779
>emb|AL589699.4| Mouse DNA sequence from clone RP23-92G13 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to KIAA0386, five novel genes, the Gmnn gene for geminin, gene PNAS-27, the Ttrap gene for Traf and Tnf receptor associated protein, the gene for a novel protein similar to KIAA0319, the gene for the ortholog of human and rat aldehyde dehydrogenase 5A1 (succinate-semialdehyde dehydrogenase) (ALDH5A1) (SSADH), the 5' end of the Gpld1 gene for glycosylphosphatidylinositol specific phospholipase D1 and four CpG islands, complete sequence Length = 256608 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 46804 tcttcttcagaatcaaattc 46823
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 caggccggagaacttgaggt 620 |||||||||||||||||||| Sbjct: 186890 caggccggagaacttgaggt 186871
>emb|CR617635.1| full-length cDNA clone CS0DB008YL04 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1045 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 721 tcttcttcagaatcaaattc 702
>emb|CR615209.1| full-length cDNA clone CS0DA004YB24 of Neuroblastoma of Homo sapiens (human) Length = 1114 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 803 tcttcttcagaatcaaattc 784
>emb|CR609155.1| full-length cDNA clone CS0DC011YL12 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1215 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 853 tcttcttcagaatcaaattc 834
>emb|CR597438.1| full-length cDNA clone CS0DJ005YA24 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1211 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 860 tcttcttcagaatcaaattc 841
>dbj|AK021685.1| Homo sapiens cDNA FLJ11623 fis, clone HEMBA1004168, highly similar to Homo sapiens geminin mRNA Length = 1133 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 743 tcttcttcagaatcaaattc 724
>gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1004C08, complete sequence Length = 133090 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 ctcacttatcaatatagtcattct 190 ||||||||||||||| |||||||| Sbjct: 87423 ctcacttatcaatatcgtcattct 87400
>dbj|AP002086.1| Agrobacterium rhizogenes plasmid pRi1724 DNA, complete sequence Length = 217594 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 tctatgtatgaatactttca 579 |||||||||||||||||||| Sbjct: 27014 tctatgtatgaatactttca 26995
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ccatctcatcatcgtcatcc 372 |||||||||||||||||||| Sbjct: 620243 ccatctcatcatcgtcatcc 620262
>gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 map ve016, complete sequence Length = 69817 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcctcttcttcagaatcaaa 245 |||||||||||||||||||| Sbjct: 24303 tcctcttcttcagaatcaaa 24322
>dbj|AK131959.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410141J22 product:geminin, full insert sequence Length = 949 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 633 tcttcttcagaatcaaattc 614
>gb|AC139035.12| Mus musculus chromosome 5, clone RP23-348E9, complete sequence Length = 237627 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atcaaattcttcttcttcat 259 |||||||||||||||||||| Sbjct: 86912 atcaaattcttcttcttcat 86893
>gb|AC010647.5| Homo sapiens chromosome 19 clone LLNLR-279F8, complete sequence Length = 40102 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 458 tgatcttcttctccttgatcattt 481 ||||||| |||||||||||||||| Sbjct: 30695 tgatctttttctccttgatcattt 30718
>ref|XM_702308.1| PREDICTED: Danio rerio similar to zinc finger protein 483, transcript variant 2 (LOC557033), mRNA Length = 1567 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 tcatcatcaaactcctcttcttca 237 |||||||||||||| ||||||||| Sbjct: 446 tcatcatcaaactcatcttcttca 423
>ref|NM_015895.3| Homo sapiens geminin, DNA replication inhibitor (GMNN), mRNA Length = 1215 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 870 tcttcttcagaatcaaattc 851
>gb|AC154636.2| Mus musculus BAC clone RP23-302E1 from chromosome 12, complete sequence Length = 179631 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 31 ttggaagacttgtctcacaaatcaaaaa 58 ||||||||||||||||| ||| |||||| Sbjct: 159794 ttggaagacttgtctcaaaaaacaaaaa 159821
>gb|AC138177.12| Mus musculus chromosome 15, clone RP23-32P19, complete sequence Length = 180896 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 acacacacacagacggttca 95 |||||||||||||||||||| Sbjct: 84461 acacacacacagacggttca 84480
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcattctcatcctctaaatg 203 |||||||||||||||||||| Sbjct: 8798305 tcattctcatcctctaaatg 8798286
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 cctagaaaagaaaaaattga 423 |||||||||||||||||||| Sbjct: 16714811 cctagaaaagaaaaaattga 16714830 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 ctcacttatcaatatagtcattct 190 ||||||||||||||| |||||||| Sbjct: 1746937 ctcacttatcaatatcgtcattct 1746960
>gb|AC129028.3| Homo sapiens 12 BAC RP11-351M14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 50983 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 550 ctatttcttttctatgtatgaata 573 |||||||||||||||| ||||||| Sbjct: 47690 ctatttcttttctatgcatgaata 47667
>emb|AL662961.3|OSJN00164 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028M15, complete sequence Length = 187330 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcattctcatcctctaaatg 203 |||||||||||||||||||| Sbjct: 140844 tcattctcatcctctaaatg 140825
>gb|AC113052.10| Mus musculus chromosome 5, clone RP23-250D22, complete sequence Length = 193698 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 tccacaagaacacacacaca 86 |||||||||||||||||||| Sbjct: 8118 tccacaagaacacacacaca 8099
>dbj|AK222992.1| Homo sapiens mRNA for geminin variant, clone: HSI10825 Length = 977 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 534 tcttcttcagaatcaaattc 515
>dbj|AB006689.1| Agrobacterium rhizogenes plasmid pRi1724 rolA, rolB, rolC gene, partial and complete cds Length = 10844 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 tctatgtatgaatactttca 579 |||||||||||||||||||| Sbjct: 10682 tctatgtatgaatactttca 10663
>gb|AC019185.8| Homo sapiens BAC clone RP11-299P7 from 2, complete sequence Length = 172349 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 gcctatttcttttctatgta 567 |||||||||||||||||||| Sbjct: 170458 gcctatttcttttctatgta 170477
>gb|AC008279.3| Homo sapiens BAC clone RP11-427F22 from 2, complete sequence Length = 157258 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tccatctcatcatcgtcatc 371 |||||||||||||||||||| Sbjct: 39103 tccatctcatcatcgtcatc 39084
>gb|AC110080.2| Homo sapiens BAC clone RP11-421K23 from 2, complete sequence Length = 172465 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 171694 tttgtagagtcggtgcttca 171675
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 aaaaggggaaattccacaag 74 |||||||||||||||||||| Sbjct: 1577297 aaaaggggaaattccacaag 1577316
>gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191463 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 tccacaagaacacacacaca 86 |||||||||||||||||||| Sbjct: 142353 tccacaagaacacacacaca 142334
>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221267 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 226 tcctcttcttcagaatcaaattcttcttcttc 257 |||||||||||| ||||| |||||||||||| Sbjct: 218008 tcctcttcttcaaaatcatcttcttcttcttc 218039
>gb|AC108832.10| Mus musculus chromosome 7, clone RP23-242J3, complete sequence Length = 185083 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tctctgtactatccatctca 360 |||||||||||||||||||| Sbjct: 155038 tctctgtactatccatctca 155057
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 aaaagaaaaaattgagcttc 428 |||||||||||||||||||| Sbjct: 189850 aaaagaaaaaattgagcttc 189869
>gb|AF068780.1|AF068780 Mus musculus geminin mRNA, complete cds Length = 1123 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 806 tcttcttcagaatcaaattc 787
>gb|AF067855.1|AF067855 Homo sapiens geminin mRNA, complete cds Length = 961 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 561 tcttcttcagaatcaaattc 542
>gb|BC084429.1| Xenopus laevis hypothetical LOC495278, mRNA (cDNA clone MGC:86433 IMAGE:7011977), complete cds Length = 1976 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gcatctcctcctcatcatca 222 |||||||||||||||||||| Sbjct: 1817 gcatctcctcctcatcatca 1798
>emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 in linkage group 5, complete sequence Length = 142918 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 tcatcatcaaactcctcttcttca 237 |||||||||||||| ||||||||| Sbjct: 71577 tcatcatcaaactcatcttcttca 71600
>emb|BX469914.4| Mouse DNA sequence from clone RP23-217J7 on chromosome X, complete sequence Length = 30886 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 tccaccctagaaaagaaaaa 418 |||||||||||||||||||| Sbjct: 18476 tccaccctagaaaagaaaaa 18457
>emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1, COMPLETE SEQUENCE Length = 122965 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcctcttcttcagaatcaaa 245 |||||||||||||||||||| Sbjct: 110000 tcctcttcttcagaatcaaa 109981
>gb|AC004049.1|AC004049 Homo sapiens chromosome 4 clone B203C23 map 4q25, complete sequence Length = 173766 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 caaatcaaaaaggggaaatt 67 |||||||||||||||||||| Sbjct: 35283 caaatcaaaaaggggaaatt 35302
>ref|NM_020567.1| Mus musculus geminin (Gmnn), mRNA Length = 1123 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tcttcttcagaatcaaattc 248 |||||||||||||||||||| Sbjct: 806 tcttcttcagaatcaaattc 787
>ref|NG_000834.1| Homo sapiens immunoglobulin kappa locus, proximal V-cluster and J-C cluster (IGK-proximal) on chromosome 2 Length = 515442 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 11720 tttgtagagtcggtgcttca 11739
>ref|NG_000833.1| Homo sapiens immunoglobulin kappa locus, distal duplicated V-cluster (IGK-distal) on chromosome 2 Length = 407661 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 396329 tttgtagagtcggtgcttca 396310
>dbj|AP004944.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43B20, TM0117a, complete sequence Length = 33359 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ctcctcatcatcaaactcctcttc 233 |||| ||||||||||||||||||| Sbjct: 7393 ctccgcatcatcaaactcctcttc 7370
>emb|AL808120.9| Mouse DNA sequence from clone RP23-418E2 on chromosome X, complete sequence Length = 148328 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 ttcttttctatgtatgaata 573 |||||||||||||||||||| Sbjct: 36938 ttcttttctatgtatgaata 36957
>emb|X59317.1|HSIGKLV3A H.sapiens gene for Ig kappa light chain variable region "V3a" Length = 1372 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 457 tttgtagagtcggtgcttca 476
>emb|X59314.1|HSIGKL011 H.sapiens gene for Ig kappa light chain variable region "011" Length = 2196 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 1830 tttgtagagtcggtgcttca 1849
>emb|X59311.1|HSIGKLC01 H.sapiens gene for Ig kappa light chain variable region "01" Length = 1470 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 1087 tttgtagagtcggtgcttca 1106
>gb|AY130758.1| Caenorhabditis elegans titin locus, complete sequence Length = 126899 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 aaattcttcttcttcataaa 262 |||||||||||||||||||| Sbjct: 114655 aaattcttcttcttcataaa 114674
>gb|AC163629.5| Mus musculus BAC clone RP24-542G7 from chromosome 17, complete sequence Length = 198902 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 tccacaagaacacacacaca 86 |||||||||||||||||||| Sbjct: 32315 tccacaagaacacacacaca 32296
>gb|L16977.1|PETGLUDECA Petunia hybrida glutamate decarboxylase (gad) mRNA, complete cds Length = 1785 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 aaaggtactccaatttcttt 598 |||||||||||||||||||| Sbjct: 1195 aaaggtactccaatttcttt 1176
>gb|L16797.1|PETGADX Petunia hybrida glutamate decarboxylase (gad) mRNA, complete cds Length = 1785 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 aaaggtactccaatttcttt 598 |||||||||||||||||||| Sbjct: 1195 aaaggtactccaatttcttt 1176
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 tcaaactcctcttcttcaga 239 |||||||||||||||||||| Sbjct: 115610 tcaaactcctcttcttcaga 115629
>dbj|AP001247.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:lambda316 Length = 16950 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 11333 tttgtagagtcggtgcttca 11352
>dbj|AP001239.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos850 Length = 34747 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 3628 tttgtagagtcggtgcttca 3647
>dbj|AP001225.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos217 Length = 12248 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 11720 tttgtagagtcggtgcttca 11739
>dbj|AP001221.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos151 Length = 38672 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 tttgtagagtcggtgcttca 666 |||||||||||||||||||| Sbjct: 2259 tttgtagagtcggtgcttca 2278 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 20,895,655 Number of Sequences: 3902068 Number of extensions: 20895655 Number of successful extensions: 292087 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 291124 Number of HSP's gapped (non-prelim): 963 length of query: 669 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 646 effective length of database: 17,143,297,704 effective search space: 11074570316784 effective search space used: 11074570316784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
