Clone Information

BLAST Search Result

Clone Name	rbags22c02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	YIPL_SOLTU (P59234) Protein yippee-like	67	2e-11
2	YIPL3_ARATH (Q9C777) Protein yippee-like At3g11230	58	1e-08
3	YIPL1_ARATH (Q9SR97) Protein yippee-like At3g08990	56	3e-08
4	YIPL6_ARATH (Q9FN32) Protein yippee-like At5g53940	49	5e-06
5	YIPL4_ARATH (Q9LY56) Protein yippee-like At3g55890	48	1e-05
6	YIPL5_ARATH (Q9T096) Protein yippee-like At4g27740	47	3e-05
7	YIPL_ORYSA (Q8S5M8) Protein yippee-like OJ1003C07.11	46	4e-05
8	YPL1_CAEEL (Q9U3G6) Protein yippee-like F37A8.5	44	1e-04
9	YPEL1_MOUSE (Q9ESC7) Protein yippee-like 1 (DGL-1) (Mdgl-1)	44	1e-04
10	YPEL1_HUMAN (O60688) Protein yippee-like 1	44	1e-04
11	YPEL1_COTJA (Q9DG42) Protein yippee-like 1 (DGL-1) (Qdgl-1)	44	1e-04
12	YPEL1_CERAE (Q65Z59) Protein yippee-like 1	44	1e-04
13	YPEL6_MOUSE (Q9D0U3) Protein yippee-like 6	44	2e-04
14	YPEL3_MOUSE (P61237) Protein yippee-like 3	44	2e-04
15	YPEL3_HUMAN (P61236) Protein yippee-like 3	44	2e-04
16	YPEL3_CERAE (Q65Z57) Protein yippee-like 3	44	2e-04
17	YPEL4_RAT (Q5XID5) Protein yippee-like 4	44	2e-04
18	YPEL4_MOUSE (Q65Z93) Protein yippee-like 4	44	2e-04
19	YPEL4_HUMAN (Q96NS1) Protein yippee-like 4	44	2e-04
20	YPEL4_CERAE (Q65Z56) Protein yippee-like 4	44	2e-04
21	YPEL2_PONPY (Q5RDN9) Protein yippee-like 2	43	3e-04
22	YPEL2_MOUSE (Q65Z95) Protein yippee-like 2	43	3e-04
23	YPEL2_HUMAN (Q96QA6) Protein yippee-like 2	43	3e-04
24	YPEL2_CERAE (Q65Z58) Protein yippee-like 2	43	3e-04
25	YPL1_DROME (Q9W2X7) Protein yippee-like CG15309	42	5e-04
26	YIPP_DROME (Q9XZF0) Protein yippee	42	5e-04
27	YPEL5_PONPY (Q5RDU7) Protein yippee-like 5	40	0.003
28	YPEL5_MOUSE (P62700) Protein yippee-like 5	40	0.003
29	YPEL5_HUMAN (P62699) Protein yippee-like 5	40	0.003
30	YPEL5_CERAE (Q65Z55) Protein yippee-like 5	40	0.003
31	MOH1_YEAST (P38191) Protein yippee-like MOH1	40	0.003
32	YIPL_SCHPO (Q9URW3) Protein yippee-like PJ691.02	40	0.003
33	RUMA_PSE14 (Q48FH7) 23S rRNA (uracil-5-)-methyltransferase rumA ...	33	0.23
34	NETR_MOUSE (O08762) Neurotrypsin precursor (EC 3.4.21.-) (Motops...	32	0.51
35	YPL2_CAEEL (O44440) Protein yippee-like B0546.4	32	0.67
36	CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-...	31	1.5
37	TILS_NEPOL (Q9T390) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR...	30	1.9
38	Y2124_MYCBO (P64944) Hypothetical protein Mb2124c	30	2.5
39	Y2097_MYCTU (P64943) Hypothetical protein Rv2097c/MT2158	30	2.5
40	Y1328_MYCLE (P54077) Hypothetical protein ML1328	30	2.5
41	CCAP_MANSE (Q8WRC7) Cardioactive peptide precursor (CCAP) (Crust...	29	4.3
42	5E5_RAT (Q63003) 5E5 antigen	29	4.3
43	RHAA_ECO57 (P58506) L-rhamnose isomerase (EC 5.3.1.14)	29	4.3
44	RUMA_PSEU2 (Q4ZQ44) 23S rRNA (uracil-5-)-methyltransferase rumA ...	29	4.3
45	ACHA2_HUMAN (Q15822) Neuronal acetylcholine receptor protein, al...	29	4.3
46	VN53_ROTS1 (P15687) Nonstructural RNA-binding protein 53 (NS53) ...	29	4.3
47	LMO6_HUMAN (O43900) LIM domain only protein 6 (Triple LIM domain...	29	4.3
48	VSX1_HUMAN (Q9NZR4) Visual system homeobox 1 (Transcription fact...	29	5.7
49	STK39_MOUSE (Q9Z1W9) STE20/SPS1-related proline-alanine-rich pro...	29	5.7
50	VN53_ROTSP (P35425) Nonstructural RNA-binding protein 53 (NS53) ...	29	5.7
51	ATG1_COLLN (P87248) Serine/threonine-protein kinase ATG1 (EC 2.7...	29	5.7
52	PYRG_HUMAN (P17812) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga...	28	7.4
53	CTND1_HUMAN (O60716) Catenin delta-1 (p120 catenin) (p120(ctn)) ...	28	7.4
54	PRT2_SCOSC (P83265) Sperm protamine alpha isoform 2 (Scombrine a...	28	7.4
55	PRT1_SCOSC (P83264) Sperm protamine alpha isoform 1 (Scombrine a...	28	7.4
56	RHAA_SALTI (Q8Z2V3) L-rhamnose isomerase (EC 5.3.1.14)	28	7.4
57	RHAA_ECOLI (P32170) L-rhamnose isomerase (EC 5.3.1.14)	28	7.4
58	PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate p...	28	7.4
59	UPPS_COXBU (Q83BV5) Undecaprenyl pyrophosphate synthetase (EC 2....	28	7.4
60	CP191_CARAU (P79690) Cytochrome P450 19 type 1 (EC 1.14.14.1) (B...	28	7.4
61	RHAA_SALPA (Q5PKG4) L-rhamnose isomerase (EC 5.3.1.14)	28	9.7
62	GLPK_YEAST (P32190) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol ...	28	9.7

>YIPL_SOLTU (P59234) Protein yippee-like|
          Length = 129

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 31/61 (50%), Positives = 39/61 (63%)
 Frame = -1

Query: 434 VACGAILGWKYVSAFEKDQRYKEGKFILERCKIHSGGGGPPDRIQLWAEHDARISSSEDD 255
           V CG+I+GWKY +A EK Q+YKEGK +LER KI       PD    WA HD  ++ S+ D
Sbjct: 73  VCCGSIVGWKYETAHEKSQKYKEGKSVLERFKITG-----PDGSHYWASHDTHVAGSDAD 127

Query: 254 D 252
           D
Sbjct: 128 D 128

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>YIPL3_ARATH (Q9C777) Protein yippee-like At3g11230|
          Length = 129

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 27/61 (44%), Positives = 35/61 (57%)
 Frame = -1

Query: 434 VACGAILGWKYVSAFEKDQRYKEGKFILERCKIHSGGGGPPDRIQLWAEHDARISSSEDD 255
           V CG+ +GWKY  AFEK+Q+YKEGK +LER K+       PD    W   +     S+ D
Sbjct: 73  VKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWG-----PDGNNYWVAQEVEAGDSDTD 127

Query: 254 D 252
           D
Sbjct: 128 D 128

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>YIPL1_ARATH (Q9SR97) Protein yippee-like At3g08990|
          Length = 128

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = -1

Query: 434 VACGAILGWKYVSAFEKDQRYKEGKFILERCKIHSGGGGPPDRIQ 300
           V+CG+++GWKY  A++K Q+YKEGKFILER K+    GG  D  Q
Sbjct: 73  VSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGYDMNQ 117

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>YIPL6_ARATH (Q9FN32) Protein yippee-like At5g53940|
          Length = 129

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILERCKI 336
           CG  +GWKY SA EK Q+YKEGKF+LER +I
Sbjct: 75  CGQNVGWKYESAHEKAQKYKEGKFVLERGRI 105

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>YIPL4_ARATH (Q9LY56) Protein yippee-like At3g55890|
          Length = 121

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 25/51 (49%), Positives = 31/51 (60%)
 Frame = -1

Query: 434 VACGAILGWKYVSAFEKDQRYKEGKFILERCKIHSGGGGPPDRIQLWAEHD 282
           V CG+ +GWKY  A EK Q+YKEGK +LE  KI     GP D   L ++ D
Sbjct: 73  VGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKI----SGPHDSNDLVSDGD 119

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>YIPL5_ARATH (Q9T096) Protein yippee-like At4g27740|
          Length = 148

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 20/33 (60%), Positives = 23/33 (69%)
 Frame = -1

Query: 434 VACGAILGWKYVSAFEKDQRYKEGKFILERCKI 336
           V C   LGWKY  A+E  Q+YKEGKFI E+ KI
Sbjct: 111 VDCNEPLGWKYERAYETSQKYKEGKFIFEKAKI 143

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>YIPL_ORYSA (Q8S5M8) Protein yippee-like OJ1003C07.11|
          Length = 119

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 17/31 (54%), Positives = 25/31 (80%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILERCKI 336
           C  ILGW+Y  A+E+ ++YKEGKFILE+ ++
Sbjct: 84  CQQILGWRYEKAYEESEKYKEGKFILEKARM 114

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>YPL1_CAEEL (Q9U3G6) Protein yippee-like F37A8.5|
          Length = 137

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGKFI+E
Sbjct: 95  CKTTLGWKYEHAFESSQKYKEGKFIIE 121

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>YPEL1_MOUSE (Q9ESC7) Protein yippee-like 1 (DGL-1) (Mdgl-1)|
          Length = 118

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGKFI+E
Sbjct: 82  CKTTLGWKYEHAFESSQKYKEGKFIIE 108

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>YPEL1_HUMAN (O60688) Protein yippee-like 1|
          Length = 119

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGKFI+E
Sbjct: 82  CKTTLGWKYEHAFESSQKYKEGKFIIE 108

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>YPEL1_COTJA (Q9DG42) Protein yippee-like 1 (DGL-1) (Qdgl-1)|
          Length = 119

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGKFI+E
Sbjct: 82  CKTTLGWKYEHAFESSQKYKEGKFIIE 108

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>YPEL1_CERAE (Q65Z59) Protein yippee-like 1|
          Length = 119

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGKFI+E
Sbjct: 82  CKTTLGWKYEHAFESSQKYKEGKFIIE 108

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>YPEL6_MOUSE (Q9D0U3) Protein yippee-like 6|
          Length = 119

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 82  CKTTLGWKYEQAFESSQKYKEGKYIIE 108

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>YPEL3_MOUSE (P61237) Protein yippee-like 3|
          Length = 119

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 82  CKTTLGWKYEQAFESSQKYKEGKYIIE 108

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>YPEL3_HUMAN (P61236) Protein yippee-like 3|
          Length = 119

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 82  CKTTLGWKYEQAFESSQKYKEGKYIIE 108

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>YPEL3_CERAE (Q65Z57) Protein yippee-like 3|
          Length = 119

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 82  CKTTLGWKYEQAFESSQKYKEGKYIIE 108

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>YPEL4_RAT (Q5XID5) Protein yippee-like 4|
          Length = 127

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -1

Query: 431 ACGAILGWKYVSAFEKDQRYKEGKFILE 348
           +C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 89  SCKTTLGWKYEQAFETSQKYKEGKYIIE 116

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>YPEL4_MOUSE (Q65Z93) Protein yippee-like 4|
          Length = 127

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -1

Query: 431 ACGAILGWKYVSAFEKDQRYKEGKFILE 348
           +C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 89  SCKTTLGWKYEQAFETSQKYKEGKYIIE 116

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>YPEL4_HUMAN (Q96NS1) Protein yippee-like 4|
          Length = 127

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -1

Query: 431 ACGAILGWKYVSAFEKDQRYKEGKFILE 348
           +C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 89  SCKTTLGWKYEQAFETSQKYKEGKYIIE 116

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>YPEL4_CERAE (Q65Z56) Protein yippee-like 4|
          Length = 127

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -1

Query: 431 ACGAILGWKYVSAFEKDQRYKEGKFILE 348
           +C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 89  SCKTTLGWKYEQAFETSQKYKEGKYIIE 116

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>YPEL2_PONPY (Q5RDN9) Protein yippee-like 2|
          Length = 119

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 82  CKTTLGWKYEHAFESSQKYKEGKYIIE 108

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>YPEL2_MOUSE (Q65Z95) Protein yippee-like 2|
          Length = 119

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 82  CKTTLGWKYEHAFESSQKYKEGKYIIE 108

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>YPEL2_HUMAN (Q96QA6) Protein yippee-like 2|
          Length = 119

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 82  CKTTLGWKYEHAFESSQKYKEGKYIIE 108

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>YPEL2_CERAE (Q65Z58) Protein yippee-like 2|
          Length = 119

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  AFE  Q+YKEGK+I+E
Sbjct: 82  CKTTLGWKYEHAFESSQKYKEGKYIIE 108

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>YPL1_DROME (Q9W2X7) Protein yippee-like CG15309|
          Length = 114

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   LGWKY  A+E  Q+YKEGKFI+E
Sbjct: 77  CKTPLGWKYEHAYESSQKYKEGKFIIE 103

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>YIPP_DROME (Q9XZF0) Protein yippee|
          Length = 121

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 20/40 (50%), Positives = 24/40 (60%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILERCKIHSGGGGPPD 309
           CGA LGW Y  A E+ Q+YKEG+ ILE   I    G P +
Sbjct: 76  CGAKLGWMYEFATEESQKYKEGRVILEYALITEAEGFPSE 115

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>YPEL5_PONPY (Q5RDU7) Protein yippee-like 5|
          Length = 121

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILERCKIHSGGG 321
           C + LGW Y  A E  QRYKEG+ ILER  +    G
Sbjct: 76  CNSKLGWIYEFATEDSQRYKEGRVILERALVRESEG 111

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>YPEL5_MOUSE (P62700) Protein yippee-like 5|
          Length = 121

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILERCKIHSGGG 321
           C + LGW Y  A E  QRYKEG+ ILER  +    G
Sbjct: 76  CNSKLGWIYEFATEDSQRYKEGRVILERALVRESEG 111

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>YPEL5_HUMAN (P62699) Protein yippee-like 5|
          Length = 121

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILERCKIHSGGG 321
           C + LGW Y  A E  QRYKEG+ ILER  +    G
Sbjct: 76  CNSKLGWIYEFATEDSQRYKEGRVILERALVRESEG 111

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>YPEL5_CERAE (Q65Z55) Protein yippee-like 5|
          Length = 121

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILERCKIHSGGG 321
           C + LGW Y  A E  QRYKEG+ ILER  +    G
Sbjct: 76  CNSKLGWIYEFATEDSQRYKEGRVILERALVRESEG 111

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>MOH1_YEAST (P38191) Protein yippee-like MOH1|
          Length = 138

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   +GWKY+ +   DQ+YKEGKFILE
Sbjct: 104 CKRNVGWKYLQSSNDDQQYKEGKFILE 130

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>YIPL_SCHPO (Q9URW3) Protein yippee-like PJ691.02|
          Length = 131

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 14/27 (51%), Positives = 21/27 (77%)
 Frame = -1

Query: 428 CGAILGWKYVSAFEKDQRYKEGKFILE 348
           C   +GWKYVS++E  Q++K+G +ILE
Sbjct: 75  CHTYIGWKYVSSYEPSQKFKDGHYILE 101

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>RUMA_PSE14 (Q48FH7) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)|
           (23S rRNA(M-5-U1939)-methyltransferase)
          Length = 451

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +1

Query: 226 VLQGHTAPWSSSSLELMRASCSAHS---WMRSGGPPPP 330
           VL  HTAP + + L L++A CS H    W+   G P P
Sbjct: 219 VLLRHTAPLAEADLALLQAFCSKHGAQLWLHGEGEPQP 256

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>NETR_MOUSE (O08762) Neurotrypsin precursor (EC 3.4.21.-) (Motopsin)|
           (Brain-specific serine protease 3) (BSSP-3)
          Length = 761

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 339 DPLGRRRPSRPHPAVGRARRSHKLQRGRRPGR 244
           DP+ R    RPHP+  R++ +H L   RRP R
Sbjct: 22  DPVSRSPLHRPHPSPPRSQHAHYLPSSRRPPR 53

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>YPL2_CAEEL (O44440) Protein yippee-like B0546.4|
          Length = 161

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -1

Query: 434 VACGAILGWKYVSAFEKDQRYKEGKFILERCKIHSGGGGPPD 309
           V C   LGW Y  A  + Q YKE + I+E        G   D
Sbjct: 75  VTCNQKLGWMYEMAVSESQTYKETQVIIENANFEKIAGAIKD 116

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>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)|
           (Chromatin assembly factor I p150 subunit) (CAF-I 150
           kDa subunit) (CAF-Ip150)
          Length = 938

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 302 GCGREGRLRPSGSCTSRG*TCPPYTSGPSQTQRR 403
           GCG  GR   S  C+ R  +CP  TSGP    R+
Sbjct: 171 GCGGAGRRGDSQECSPR--SCPELTSGPRMCPRK 202

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>TILS_NEPOL (Q9T390) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 367

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +1

Query: 250 WSSSSLELMRAS-CSAHSWMRSGGPPPPEWILHLSRMNLPSLYLWSFSNAETYF 408
           W SS  +L+    C  + W+  GG   P  I H    +L S  LW F N    F
Sbjct: 269 WESSYYDLICTQICQQYEWIGDGGVRFPWRIFHSIPTSLHSRILWIFLNRALVF 322

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>Y2124_MYCBO (P64944) Hypothetical protein Mb2124c|
          Length = 452

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 13  GGHTFLYVHTNDDNRSDSYGCTDNR*ISRHGSWSR 117
           GG  +L+ + N D+  +SYGC +N  I R G +SR
Sbjct: 103 GGDIYLFKN-NTDSAGNSYGCHENYLIVRAGEFSR 136

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>Y2097_MYCTU (P64943) Hypothetical protein Rv2097c/MT2158|
          Length = 452

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 13  GGHTFLYVHTNDDNRSDSYGCTDNR*ISRHGSWSR 117
           GG  +L+ + N D+  +SYGC +N  I R G +SR
Sbjct: 103 GGDIYLFKN-NTDSAGNSYGCHENYLIVRAGEFSR 136

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>Y1328_MYCLE (P54077) Hypothetical protein ML1328|
          Length = 452

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 13  GGHTFLYVHTNDDNRSDSYGCTDNR*ISRHGSWSR 117
           GG  +L+ + N D+  +SYGC +N  I R G +SR
Sbjct: 103 GGDIYLFKN-NTDSAGNSYGCHENYLIVRAGEFSR 136

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>CCAP_MANSE (Q8WRC7) Cardioactive peptide precursor (CCAP) (Crustacean|
           cardioactive peptide) (Cardioacceleratory peptide 2a)
          Length = 125

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +2

Query: 176 YLQSCHVC-LPNQLDPALSCKVTRRPGRRPRWSLCERRARPTAGCGREGRLRPSG 337
           YL  C+   +P   DP LS ++   P +RP    C        GCGR+    P G
Sbjct: 16  YLDCCYAASIPRNFDPRLSEEIVMAPKKRP---FC----NAFTGCGRKRSQGPPG 63

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>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/51 (41%), Positives = 25/51 (49%)
 Frame = +2

Query: 215 DPALSCKVTRRPGRRPRWSLCERRARPTAGCGREGRLRPSGSCTSRG*TCP 367
           DP  S   +RRP RRPR  L  +R  P A   +E  LR + SC   G   P
Sbjct: 744 DPGASRPGSRRPARRPRGELTPQRPSPFA--PQEEGLR-AESCVDDGAIAP 791

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>RHAA_ECO57 (P58506) L-rhamnose isomerase (EC 5.3.1.14)|
          Length = 419

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 191 DMTVNITSVNQRRSLPWQCK-PCSCSLDQEPCLLIYLLSVQPYESDRLS 48
           D T  +  + +++SLPWQ      C     P    +L SV+ YE + LS
Sbjct: 368 DYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSEWLESVRAYEKETLS 416

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>RUMA_PSEU2 (Q4ZQ44) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)|
           (23S rRNA(M-5-U1939)-methyltransferase)
          Length = 451

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = +1

Query: 226 VLQGHTAPWSSSSLELMRASCSAHS---WMRSGGPPPP 330
           VL  HTA    + L L++A CS H    W+   G P P
Sbjct: 219 VLLRHTASLVEADLALLQAFCSRHGAQLWLHGEGEPQP 256

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>ACHA2_HUMAN (Q15822) Neuronal acetylcholine receptor protein, alpha-2 subunit|
           precursor
          Length = 529

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 301 WMRSGGPPPPEWILHLSRMNLPSLYLWSFSNAE 399
           W+    PPPP  + H  R+ L   Y W  SN +
Sbjct: 377 WLLMNRPPPPVELCHPLRLKLSPSYHWLESNVD 409

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>VN53_ROTS1 (P15687) Nonstructural RNA-binding protein 53 (NS53) (NCVP2)|
          Length = 495

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
 Frame = -1

Query: 152 SLPWQCKPC----SCSLDQEPCLLIYLLSVQPYESDRLSSFVCTYKNVCP 15
           SLP  CK C     C LD EP LL       P   D+L   +  Y  + P
Sbjct: 58  SLPHVCKWCVQNRRCFLDNEPHLLKLRTVKHPITKDKLQCIIDLYNIIFP 107

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>LMO6_HUMAN (O43900) LIM domain only protein 6 (Triple LIM domain protein 6)|
          Length = 615

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = -3

Query: 336 PLGRRRPSRPHPAVGRARR----SHKLQRGRRPGRRVTLQDNAGS 214
           P  RRRP  P P     RR    +H     R P RR   Q +AGS
Sbjct: 494 PAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCDAGS 538

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>VSX1_HUMAN (Q9NZR4) Visual system homeobox 1 (Transcription factor VSX1)|
           (Retinal inner nuclear layer homeobox protein)
           (Homeodomain protein RINX)
          Length = 365

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -3

Query: 354 PREVQDPLGRRRPSRPHPAVGRARRSHKLQRGRRPGRRVTLQDNAGSS*LGRQ 196
           P    +P     PSRP PA+GR +RS  +       +     D   S  LG++
Sbjct: 110 PPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLGKR 162

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>STK39_MOUSE (Q9Z1W9) STE20/SPS1-related proline-alanine-rich protein kinase (EC|
           2.7.11.1) (Ste-20-related kinase)
           (Serine/threonine-protein kinase 39)
          Length = 556

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -1

Query: 407 KYVSAFEKDQRYKEGKFILERCKIHSGGGGPPDRIQLWAEHDARISSSEDDD 252
           K  ++ EK +R KE     E  +I    GG P++IQ  + HD++   + ++D
Sbjct: 409 KAAASQEKSRRVKE-----ENSEISVNAGGIPEQIQSLSVHDSQAQPNANED 455

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>VN53_ROTSP (P35425) Nonstructural RNA-binding protein 53 (NS53) (NCVP2)|
          Length = 495

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
 Frame = -1

Query: 152 SLPWQCKPC----SCSLDQEPCLLIYLLSVQPYESDRLSSFVCTYKNVCP 15
           SLP  CK C     C LD EP LL       P   D+L   +  Y  + P
Sbjct: 58  SLPHVCKWCVQNRRCFLDNEPHLLKLQQLKHPITKDKLQCIIDLYNIIFP 107

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>ATG1_COLLN (P87248) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)|
           (Autophagy-related protein 1) (Colletotrichum
           lindemuthianum kinase 1)
          Length = 675

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 351 REVQDPLGRRRPSRPHPAVGRARRSHKL 268
           RE+ + LG RRP  P P+     R H+L
Sbjct: 402 REIGEGLGIRRPPMPQPSTSAPSRPHRL 429

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>PYRG_HUMAN (P17812) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 591

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = -3

Query: 357 HPREVQDPLGRRRPSRPH-----PAVGRARRSHKLQRGRRPGRRVTLQDNAGSS 211
           HP  +  P+   +PS P+      +VGR   SH LQ+G R   R T  D +GSS
Sbjct: 526 HPEFLSRPI---KPSPPYFGLLLASVGRL--SHYLQKGCRLSPRDTYSDRSGSS 574

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>CTND1_HUMAN (O60716) Catenin delta-1 (p120 catenin) (p120(ctn))|
           (Cadherin-associated Src substrate) (CAS) (p120(cas))
          Length = 968

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 277 RASCSAHSWMRSGGPPPPEW 336
           R S ++   +R GGPPPP W
Sbjct: 344 RGSLASLDSLRKGGPPPPNW 363

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>PRT2_SCOSC (P83265) Sperm protamine alpha isoform 2 (Scombrine alpha-2)|
          Length = 34

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = -3

Query: 336 PLGRRRPSRPHPAVGRARRSHKLQRGRRPGRR 241
           P  RRR SRP     RARRS  ++R RR  RR
Sbjct: 1   PRRRRRASRPIRRRRRARRSTAVRRRRRVVRR 32

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>PRT1_SCOSC (P83264) Sperm protamine alpha isoform 1 (Scombrine alpha-1)|
          Length = 34

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = -3

Query: 336 PLGRRRPSRPHPAVGRARRSHKLQRGRRPGRR 241
           P  RRR SRP     RARRS  ++R RR  RR
Sbjct: 1   PRRRRRASRPVRRRRRARRSTAVRRRRRVVRR 32

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>RHAA_SALTI (Q8Z2V3) L-rhamnose isomerase (EC 5.3.1.14)|
          Length = 419

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 191 DMTVNITSVNQRRSLPWQCK-PCSCSLDQEPCLLIYLLSVQPYESDRLS 48
           D T  +  + +++SLPWQ      C     P    +L SV+ YE + LS
Sbjct: 368 DYTARLAMLEEQKSLPWQAVWEMYCQRHDTPAGSQWLDSVRTYEKEILS 416

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>RHAA_ECOLI (P32170) L-rhamnose isomerase (EC 5.3.1.14)|
          Length = 419

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 191 DMTVNITSVNQRRSLPWQCK-PCSCSLDQEPCLLIYLLSVQPYESDRLS 48
           D T  +  + +++SLPWQ      C     P    +L SV+ YE + LS
Sbjct: 368 DYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSEWLESVRAYEKEILS 416

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>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core|
            protein precursor (HSPG) (Perlecan) (PLC)
          Length = 4391

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = +1

Query: 289  SAHS---WMRSGGPPPPEWILHLSRMNLPSL 372
            SAH+   W R GG  PP   +H SR+ LP +
Sbjct: 2077 SAHAQVTWYRRGGSLPPHTQVHGSRLRLPQV 2107

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>UPPS_COXBU (Q83BV5) Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) (UPP|
           synthetase) (Di-trans,poly-cis-decaprenylcistransferase)
           (Undecaprenyl diphosphate synthase) (UDS)
          Length = 237

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/53 (32%), Positives = 21/53 (39%)
 Frame = +1

Query: 268 ELMRASCSAHSWMRSGGPPPPEWILHLSRMNLPSLYLWSFSNAETYFQPRMAP 426
           ELM A    +    S  P P   I       L +  LW F+  E YF P + P
Sbjct: 155 ELMSAELFQNYLCLSDLPEPDLLIRTSGEQRLSNFMLWQFAYTEIYFTPALWP 207

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>CP191_CARAU (P79690) Cytochrome P450 19 type 1 (EC 1.14.14.1) (Brain aromatase)|
           (CYPXIXA1) (Estrogen synthetase) (P-450AROM)
          Length = 510

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 265 LELMRASCSAHSWMRSGGPPPPEWILHLSRMNLPSLYLW 381
           L L+    +A +W    G P P W+L L  +   S +LW
Sbjct: 28  LILLHRIFTAKNWRNQSGVPGPGWLLGLGPIMSYSRFLW 66

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>RHAA_SALPA (Q5PKG4) L-rhamnose isomerase (EC 5.3.1.14)|
          Length = 419

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 191 DMTVNITSVNQRRSLPWQCK-PCSCSLDQEPCLLIYLLSVQPYESDRLS 48
           D T  +  + +++SLPWQ      C     P    +L SV+ YE + LS
Sbjct: 368 DYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSQWLDSVRAYEKEILS 416

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>GLPK_YEAST (P32190) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 709

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -1

Query: 140 QCKPCSCSLDQEPCLLIYLLSVQPYESDRLSSFVCTYKNVC 18
           +C P    ++   CL   LLS+Q   S+R+++ +  YK +C
Sbjct: 154 ECHPQKLLVNVVQCLASSLLSLQTINSERVANGLPPYKVIC 194


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,173,095
Number of Sequences: 219361
Number of extensions: 1346047
Number of successful extensions: 3898
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 3691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3894
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result