ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags21n01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X99482.1|HVPAL4 H.vulgare mRNA for phenylalanine ammonia-lyase, pal4 Length = 1344 Score = 492 bits (248), Expect = e-136 Identities = 331/350 (94%), Gaps = 7/350 (2%) Strand = Plus / Minus Query: 3 aatatttatnncacattgtaccccttttaccctacatggtagaagttctactggctacat 62 ||||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||| | Sbjct: 1298 aatatttatcacacattgtaccccttttaacctacatcgtagagattctactggctacct 1239 Query: 63 accactaccaaagcatgcaattgcaatttttggcaacaacccggcagctctataagaaca 122 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1238 accactaccaaagcatgcaattgcaatttttggcaacaacccggcagctctataagacca 1179 Query: 123 atacaaaacatcgacttttaagaatatccaatggaaaaacagtgttatcacttatcagct 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1178 atacaaaacatcgacttttaagaatatccaatggaaaaacagtgttatcacttatcagct 1119 Query: 183 aagaacatctgaaaccttctgaactttgaagcacattatcatctgttcatgttcttgatc 242 ||||||||||||| ||||||||||||||| |||||||||||||||| |||| ||||||| Sbjct: 1118 aagaacatctgaagccttctgaactttgaggcacattatcatctgtccatg-tcttgat- 1061 Query: 243 cttagcagataggcaggggctcaccgttccaaccctt-gagacactcaagcagtgcgtcg 301 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 1060 cttagcagataggcaggggctcaccg-tccaacccttagagacactcaagcagtgcgtcg 1002 Query: 302 -atgtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgc 350 ||||||||||| ||||||||||| ||||||| ||||||||||||||||| Sbjct: 1001 aatgtgcttgcctttgttcatagc-acaaaca-cttgtccacttcttcgc 954
>gb|L11883.1|WHTWALI4A Triticum aestivum phenylalanine ammonia-lyase (wali4) mRNA, 3' end, partial cds Length = 634 Score = 482 bits (243), Expect = e-133 Identities = 348/383 (90%) Strand = Plus / Minus Query: 248 cagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgtgc 307 |||||||| |||||||| |||||||| ||||||||||||| ||||| |||||||||||| Sbjct: 385 cagataggtaggggctcgccgttccactccttgagacactccagcagcgcgtcgatgtgc 326 Query: 308 ttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtcttc 367 ||||||| |||||| ||||| |||||||||||||| |||||||| ||||||| |||||| Sbjct: 325 ttgccctggttcatggcaacgaacaccttgtccacctcttcgccaggagaccgcgtcttc 266 Query: 368 tcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggtatgat 427 || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 265 tccccggtcaagtactctgttccaagctccttgcgcacgaaccggtagagcgggtacgac 206 Query: 428 cggcattcagtgatacggttttgttgtgtggcagtaccgttctccacggcactccgagca 487 || || || | |||||||||||| ||||| ||||| || |||||||||||||| || || Sbjct: 205 cgacaatcggcgatacggttttgctgtgttgcagtgccattctccacggcactgcgggcg 146 Query: 488 gcctcgacctcctttggcaacattgcacgaagctcctgctcgaacatggcaagcttggca 547 ||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 145 gcctcgacctcatttggcaacactgcacggagctcctgctcgaacatggcaagcttggca 86 Query: 548 aacacagacgtctccacgtcgcgctccgcctcgccattggccaaggcgtgctccacaaga 607 ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 85 aacaccgacgtctccacgtcgcgctcggcctcaccattggccaaggcgtgctccacaaga 26 Query: 608 actgcacgcatcttctgcatgag 630 ||||||||||||||||||||||| Sbjct: 25 actgcacgcatcttctgcatgag 3 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 45 aagttctactggctacataccactaccaaagcatgcaattgcaatttttggca 97 ||||||||| |||||| | ||||||||| |||||||||||||| ||||||| Sbjct: 563 aagttctaccggctacccaacactaccaagtcatgcaattgcaatctttggca 511
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 438 bits (221), Expect = e-119 Identities = 365/409 (89%), Gaps = 3/409 (0%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 |||||| |||||||||||| |||||||| ||||||| ||||| ||||| |||||||||| Sbjct: 3105 agcagagaggcaggggctcgccgttccactccttgaggcactccagcagcgcgtcgatgt 3046 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||| | |||||| ||||| |||||||||||||| |||||||| ||||||| |||| Sbjct: 3045 gcttgccttggttcatggcaacgaacaccttgtccacctcttcgccaggagaccgcgtct 2986 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggtatg 425 |||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| | Sbjct: 2985 tctccccggtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggtacg 2926 Query: 426 atcggcattcagtgatacggttttgttgtgtggcagtaccgttctccacggcactccgag 485 | || ||||| | |||||||||||| |||| || || || ||||||||||| || || | Sbjct: 2925 accgacattcggcgatacggttttgctgtgctgcggtgccattctccacggcgcttcggg 2866 Query: 486 cagcctcgacctcctttggcaacattgcacgaagctcctgctcgaacatggcaagcttgg 545 | |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 2865 cggcctcgacctcctttggcaacactgcacggagctcctgctcgaacatggcaagcttgg 2806 Query: 546 caaacacagacgtctccacgt-cgcgctccgcctcgccattggccaaggcgtgctccaca 604 ||||||| |||||||| |||| ||| ||| ||||| ||||||||||||||||||||||| Sbjct: 2805 caaacaccgacgtctcgacgtgcgc-ctcggcctcaccattggccaaggcgtgctccacg 2747 Query: 605 agaactgcacgcatcttctgcatgagtggggtagttggcgctgcagggg 653 |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2746 agaactgcacgcatcttctgcatgag-ggggtagttggcgctgcagggg 2699
>emb|X99725.1|TAPALGEN2 T.aestivum PAL gene, coding region Length = 1419 Score = 426 bits (215), Expect = e-116 Identities = 357/403 (88%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 244 ttagcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgat 303 |||||||| |||||||||||| |||||||| ||||||| ||||||||||| || ||||| Sbjct: 1021 ttagcagagaggcaggggctcgccgttccactccttgaggcactcaagcagcgcatcgat 962 Query: 304 gtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagt 363 ||||||||||| |||||| ||||| |||||||||||||| |||||||| ||||||| || Sbjct: 961 gtgcttgccctggttcatggcaacgaacaccttgtccacctcttcgccaggagaccccgt 902 Query: 364 cttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||||| |||||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 901 cttctctccggtcaagtactccgttccaagctccttgcgcacgaatcggtagagtgggta 842 Query: 424 tgatcggcattcagtgatacggttttgttgtgtggcagtaccgttctccacggcactccg 483 || || ||||| |||||||||||||||| |||||| || ||||||||||| |||| Sbjct: 841 cgaccgacattcgtcaatacggttttgttgtgcggcagtgccattctccacggcgctcct 782 Query: 484 agcagcctcgacctcctttggcaacattgcacgaagctcctgctcgaacatggcaagctt 543 ||||||||||||||||| |||| || ||| ||||||||||||||||| |||||||||| Sbjct: 781 ggcagcctcgacctccttcggcagcactgcccgaagctcctgctcgaatgtggcaagctt 722 Query: 544 ggcaaacacagacgtctccacgtcgcgctccgcctcgccattggccaaggcgtgctccac 603 || ||||| |||||||||||||| ||||| ||||| ||||| |||||||| |||||||| Sbjct: 721 cgcgaacactgacgtctccacgtcacgctcggcctcaccatttgccaaggcatgctccac 662 Query: 604 aagaactgcacgcatcttctgcatgagtggggtagttggcgct 646 |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 661 aagaactgcacgcatcttctgcatgagt-gggtagttggcgct 620 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 45 aagttctactggctacataccactaccaaagcatgcaattgca 87 |||||||||||||||| | ||||||||| |||||||||||| Sbjct: 1195 aagttctactggctacccaacactaccaagtcatgcaattgca 1153
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp) Length = 1670 Score = 420 bits (212), Expect = e-114 Identities = 357/404 (88%), Gaps = 1/404 (0%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 |||||||||||||||||||||| ||||| |||| || |||||||| || |||||||||| Sbjct: 1428 agcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgt 1369 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||| | |||||| ||||| |||||||||||||| ||||| || ||||||| |||| Sbjct: 1368 gcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtct 1309 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggtatg 425 |||| || ||||||||||| |||||||||||||||||||| ||||||||||| ||||| | Sbjct: 1308 tctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggtacg 1249 Query: 426 atcggcattcagtgatacggttttgttgtgtggcagtaccgttctccacggcactccgag 485 | || ||||| | |||||||||||| |||| ||||| || ||||||||||| ||||| | Sbjct: 1248 accgacattcggagatacggttttgctgtgctgcagtgccattctccacggcgctccggg 1189 Query: 486 cagcctcgacctcctttggcaacattgcacgaagctcctgctcgaacatggcaagcttgg 545 | |||||||||||| ||||||||| ||| || ||||||||||||||| |||||||||||| Sbjct: 1188 cggcctcgacctccgttggcaacactgcccggagctcctgctcgaacgtggcaagcttgg 1129 Query: 546 caaacacagacgtctccacgtcgcgctccgcctcgccattggccaaggcgtgctccacaa 605 ||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||| Sbjct: 1128 caaacactgacgtctccacgtcgtgctcggcctcaccattggccaaggcgtgctccacaa 1069 Query: 606 gaactgcacgcatcttctgcatgagtggggtagttggcgctgca 649 |||| |||||||| |||||||||||| ||||||||| ||||||| Sbjct: 1068 gaaccgcacgcattttctgcatgagt-gggtagttgacgctgca 1026
>ref|XM_473196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2145 Score = 163 bits (82), Expect = 9e-37 Identities = 154/178 (86%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||| Sbjct: 2143 agcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgt 2084 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||||| |||||| || || |||||||||| ||| || |||||||| |||| |||| Sbjct: 2083 gcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtct 2024 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||| ||||||||||||||||| || ||||||| ||| || ||||||||||| ||||| Sbjct: 2023 tctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 1966 Score = 79.8 bits (40), Expect = 1e-11 Identities = 113/136 (83%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 518 agctcctgctcgaacatggcaagcttggcaaacacagacgtctccacgtcgcgctccgcc 577 ||||||| ||||||| | || | |||||| ||||| || || || |||| |||||||||| Sbjct: 1871 agctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgcc 1812 Query: 578 tcgccattggccaaggcgtgctccacaagaactgcacgcatcttctgcatgagtggggta 637 ||||| ||||||| |||||||| | || || || |||||||||||||| || ||||| Sbjct: 1811 tcgccgttggccagcgcgtgctcgatgaggacggcgcgcatcttctgcatcag-cgggta 1753 Query: 638 gttggcgctgcagggg 653 |||||||||||||||| Sbjct: 1752 gttggcgctgcagggg 1737
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 163 bits (82), Expect = 9e-37 Identities = 154/178 (86%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||| Sbjct: 118214 agcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgt 118273 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||||| |||||| || || |||||||||| ||| || |||||||| |||| |||| Sbjct: 118274 gcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtct 118333 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||| ||||||||||||||||| || ||||||| ||| || ||||||||||| ||||| Sbjct: 118334 tctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 118391 Score = 79.8 bits (40), Expect = 1e-11 Identities = 113/136 (83%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 518 agctcctgctcgaacatggcaagcttggcaaacacagacgtctccacgtcgcgctccgcc 577 ||||||| ||||||| | || | |||||| ||||| || || || |||| |||||||||| Sbjct: 118486 agctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgcc 118545 Query: 578 tcgccattggccaaggcgtgctccacaagaactgcacgcatcttctgcatgagtggggta 637 ||||| ||||||| |||||||| | || || || |||||||||||||| || ||||| Sbjct: 118546 tcgccgttggccagcgcgtgctcgatgaggacggcgcgcatcttctgcatcag-cgggta 118604 Query: 638 gttggcgctgcagggg 653 |||||||||||||||| Sbjct: 118605 gttggcgctgcagggg 118620 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | ||||||| Sbjct: 98028 agcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatga 98087 Query: 306 gcttgc 311 |||||| Sbjct: 98088 gcttgc 98093
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 163 bits (82), Expect = 9e-37 Identities = 154/178 (86%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||| Sbjct: 25900804 agcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgt 25900863 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||||| |||||| || || |||||||||| ||| || |||||||| |||| |||| Sbjct: 25900864 gcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtct 25900923 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||| ||||||||||||||||| || ||||||| ||| || ||||||||||| ||||| Sbjct: 25900924 tctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 25900981 Score = 79.8 bits (40), Expect = 1e-11 Identities = 113/136 (83%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 518 agctcctgctcgaacatggcaagcttggcaaacacagacgtctccacgtcgcgctccgcc 577 ||||||| ||||||| | || | |||||| ||||| || || || |||| |||||||||| Sbjct: 25901076 agctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgcc 25901135 Query: 578 tcgccattggccaaggcgtgctccacaagaactgcacgcatcttctgcatgagtggggta 637 ||||| ||||||| |||||||| | || || || |||||||||||||| || ||||| Sbjct: 25901136 tcgccgttggccagcgcgtgctcgatgaggacggcgcgcatcttctgcatcag-cgggta 25901194 Query: 638 gttggcgctgcagggg 653 |||||||||||||||| Sbjct: 25901195 gttggcgctgcagggg 25901210 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | ||||||| Sbjct: 25880618 agcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatga 25880677 Query: 306 gcttgc 311 |||||| Sbjct: 25880678 gcttgc 25880683
>dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118I15, full insert sequence Length = 2551 Score = 163 bits (82), Expect = 9e-37 Identities = 154/178 (86%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||| Sbjct: 2268 agcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgt 2209 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||||| |||||| || || |||||||||| ||| || |||||||| |||| |||| Sbjct: 2208 gcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtct 2149 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||| ||||||||||||||||| || ||||||| ||| || ||||||||||| ||||| Sbjct: 2148 tctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 2091 Score = 79.8 bits (40), Expect = 1e-11 Identities = 113/136 (83%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 518 agctcctgctcgaacatggcaagcttggcaaacacagacgtctccacgtcgcgctccgcc 577 ||||||| ||||||| | || | |||||| ||||| || || || |||| |||||||||| Sbjct: 1996 agctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgcc 1937 Query: 578 tcgccattggccaaggcgtgctccacaagaactgcacgcatcttctgcatgagtggggta 637 ||||| ||||||| |||||||| | || || || |||||||||||||| || ||||| Sbjct: 1936 tcgccgttggccagcgcgtgctcgatgaggacggcgcgcatcttctgcatcag-cgggta 1878 Query: 638 gttggcgctgcagggg 653 |||||||||||||||| Sbjct: 1877 gttggcgctgcagggg 1862
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 163 bits (82), Expect = 9e-37 Identities = 154/178 (86%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||| Sbjct: 27066 agcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgt 27125 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||||| |||||| || || |||||||||| ||| || |||||||| |||| |||| Sbjct: 27126 gcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtct 27185 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||| ||||||||||||||||| || ||||||| ||| || ||||||||||| ||||| Sbjct: 27186 tctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 27243 Score = 79.8 bits (40), Expect = 1e-11 Identities = 113/136 (83%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 518 agctcctgctcgaacatggcaagcttggcaaacacagacgtctccacgtcgcgctccgcc 577 ||||||| ||||||| | || | |||||| ||||| || || || |||| |||||||||| Sbjct: 27338 agctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgcc 27397 Query: 578 tcgccattggccaaggcgtgctccacaagaactgcacgcatcttctgcatgagtggggta 637 ||||| ||||||| |||||||| | || || || |||||||||||||| || ||||| Sbjct: 27398 tcgccgttggccagcgcgtgctcgatgaggacggcgcgcatcttctgcatcag-cgggta 27456 Query: 638 gttggcgctgcagggg 653 |||||||||||||||| Sbjct: 27457 gttggcgctgcagggg 27472 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | ||||||| Sbjct: 6880 agcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatga 6939 Query: 306 gcttgc 311 |||||| Sbjct: 6940 gcttgc 6945
>emb|X99483.1|HVPAL6 H.vulgare mRNA for phenylalanine ammonia-lyase, pal6 Length = 1251 Score = 149 bits (75), Expect = 1e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 244 ttagcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgat 303 ||||||||||||||| ||||| || ||||| ||||||| || || ||||| |||||||| Sbjct: 1056 ttagcagataggcagaggctcgccattccactccttgaggcattccagcagcgcgtcgat 997 Query: 304 gtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagt 363 ||||||||||| |||||| |||||||||||||||||||| || || ||||| |||| || Sbjct: 996 gtgcttgccctggttcatggcaacaaacaccttgtccacctcctccccgggtgaccgtgt 937 Query: 364 cttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggta 414 |||||| || ||||||||| | ||||| ||||||| |||||| |||||||| Sbjct: 936 cttctctcctgtcaagtacaccgttcccagctcctcgcgcacgaaccggta 886
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 147 bits (74), Expect = 5e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||| Sbjct: 16320136 agcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgt 16320195 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 |||||||| |||||| || || ||||||||| ||| || |||||||| |||| |||| Sbjct: 16320196 gcttgcccaggttcatggcgacggacaccttgttcacctcctcgccgggcgaccgcgtct 16320255 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||| ||||||||||||||||| || ||||||||||| || |||||||||| ||||| Sbjct: 16320256 tctccccggtcaagtactctgtcccgagctccttgcggacggaccggtagagcgggta 16320313 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 279 tgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacaccttgt 338 |||| ||||| ||||||| || |||||||||| || |||||| || | | |||||||| Sbjct: 20335907 tgaggcactccagcagtgggttgatgtgcttgtgctggttcatggcgatcaccaccttgt 20335848 Query: 339 ccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagctcct 398 |||| || || ||||| |||| |||||||||||||||| |||||| | || ||||||| Sbjct: 20335847 ccacctcctccccgggcgaccgcgtcttctcgccggtcaggtactcggcgccgagctcct 20335788 Query: 399 tgcgcacaaaccggtagagtgggta 423 ||||||| |||| ||| || ||||| Sbjct: 20335787 tgcgcacgaacctgtacagcgggta 20335763 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 563 acgtcgcgctccgcctcgccattggccaaggcgtgctccacaagaactgcacgcatcttc 622 |||| ||||||||||||||| ||||||| |||||||| | || || || ||||||||| Sbjct: 16319885 acgttgcgctccgcctcgccgttggccagcgcgtgctcgatgaggacggcgcgcatcttc 16319826 Query: 623 tgcatgagtggggtagttggcgctgcagggg 653 ||||| || |||||| |||||||||||||| Sbjct: 16319825 tgcatcag-cgggtagctggcgctgcagggg 16319796 Score = 56.0 bits (28), Expect = 2e-04 Identities = 110/136 (80%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 518 agctcctgctcgaacatggcaagcttggcaaacacagacgtctccacgtcgcgctccgcc 577 ||||||| ||||||| | || | |||||| ||||| || || || |||| |||||||||| Sbjct: 16320411 agctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgcc 16320470 Query: 578 tcgccattggccaaggcgtgctccacaagaactgcacgcatcttctgcatgagtggggta 637 ||||| ||||||| ||||||| | || | | |||||||||||||| || ||||| Sbjct: 16320471 tcgccgttggccagcccgtgctcgatgaggatggagcgcatcttctgcatcag-cgggta 16320529 Query: 638 gttggcgctgcagggg 653 |||||||||||||||| Sbjct: 16320530 gttggcgctgcagggg 16320545
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 147 bits (74), Expect = 5e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||| Sbjct: 16273369 agcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgt 16273428 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 |||||||| |||||| || || ||||||||| ||| || |||||||| |||| |||| Sbjct: 16273429 gcttgcccaggttcatggcgacggacaccttgttcacctcctcgccgggcgaccgcgtct 16273488 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||| ||||||||||||||||| || ||||||||||| || |||||||||| ||||| Sbjct: 16273489 tctccccggtcaagtactctgtcccgagctccttgcggacggaccggtagagcgggta 16273546 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 279 tgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacaccttgt 338 |||| ||||| ||||||| || |||||||||| || |||||| || | | |||||||| Sbjct: 20262121 tgaggcactccagcagtgggttgatgtgcttgtgctggttcatggcgatcaccaccttgt 20262062 Query: 339 ccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagctcct 398 |||| || || ||||| |||| |||||||||||||||| |||||| | || ||||||| Sbjct: 20262061 ccacctcctccccgggcgaccgcgtcttctcgccggtcaggtactcggcgccgagctcct 20262002 Query: 399 tgcgcacaaaccggtagagtgggta 423 ||||||| |||| ||| || ||||| Sbjct: 20262001 tgcgcacgaacctgtacagcgggta 20261977 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 563 acgtcgcgctccgcctcgccattggccaaggcgtgctccacaagaactgcacgcatcttc 622 |||| ||||||||||||||| ||||||| |||||||| | || || || ||||||||| Sbjct: 16273118 acgttgcgctccgcctcgccgttggccagcgcgtgctcgatgaggacggcgcgcatcttc 16273059 Query: 623 tgcatgagtggggtagttggcgctgcagggg 653 ||||| || |||||| |||||||||||||| Sbjct: 16273058 tgcatcag-cgggtagctggcgctgcagggg 16273029 Score = 56.0 bits (28), Expect = 2e-04 Identities = 110/136 (80%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 518 agctcctgctcgaacatggcaagcttggcaaacacagacgtctccacgtcgcgctccgcc 577 ||||||| ||||||| | || | |||||| ||||| || || || |||| |||||||||| Sbjct: 16273644 agctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgcc 16273703 Query: 578 tcgccattggccaaggcgtgctccacaagaactgcacgcatcttctgcatgagtggggta 637 ||||| ||||||| ||||||| | || | | |||||||||||||| || ||||| Sbjct: 16273704 tcgccgttggccagcccgtgctcgatgaggatggagcgcatcttctgcatcag-cgggta 16273762 Query: 638 gttggcgctgcagggg 653 |||||||||||||||| Sbjct: 16273763 gttggcgctgcagggg 16273778
>emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC OSJNBb0119N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79613 Score = 147 bits (74), Expect = 5e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||| Sbjct: 67187 agcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgt 67246 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 |||||||| |||||| || || ||||||||| ||| || |||||||| |||| |||| Sbjct: 67247 gcttgcccaggttcatggcgacggacaccttgttcacctcctcgccgggcgaccgcgtct 67306 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||| ||||||||||||||||| || ||||||||||| || |||||||||| ||||| Sbjct: 67307 tctccccggtcaagtactctgtcccgagctccttgcggacggaccggtagagcgggta 67364 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 563 acgtcgcgctccgcctcgccattggccaaggcgtgctccacaagaactgcacgcatcttc 622 |||| ||||||||||||||| ||||||| |||||||| | || || || ||||||||| Sbjct: 66936 acgttgcgctccgcctcgccgttggccagcgcgtgctcgatgaggacggcgcgcatcttc 66877 Query: 623 tgcatgagtggggtagttggcgctgcagggg 653 ||||| || |||||| |||||||||||||| Sbjct: 66876 tgcatcag-cgggtagctggcgctgcagggg 66847 Score = 56.0 bits (28), Expect = 2e-04 Identities = 110/136 (80%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 518 agctcctgctcgaacatggcaagcttggcaaacacagacgtctccacgtcgcgctccgcc 577 ||||||| ||||||| | || | |||||| ||||| || || || |||| |||||||||| Sbjct: 67462 agctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgcc 67521 Query: 578 tcgccattggccaaggcgtgctccacaagaactgcacgcatcttctgcatgagtggggta 637 ||||| ||||||| ||||||| | || | | |||||||||||||| || ||||| Sbjct: 67522 tcgccgttggccagcccgtgctcgatgaggatggagcgcatcttctgcatcag-cgggta 67580 Query: 638 gttggcgctgcagggg 653 |||||||||||||||| Sbjct: 67581 gttggcgctgcagggg 67596
>ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 123 bits (62), Expect = 8e-25 Identities = 164/198 (82%) Strand = Plus / Minus Query: 244 ttagcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgat 303 ||||||||| ||||||||| | |||||||| ||||||||||||||||||| | || || Sbjct: 2142 ttagcagatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaat 2083 Query: 304 gtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagt 363 ||||||||| | ||| || || || | |||||||| || || |||||||| |||| || Sbjct: 2082 gtgcttgccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 2023 Query: 364 cttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||||||||||| | |||| | ||||| ||||||| ||||||||||||||| |||||||| Sbjct: 2022 cttctcgccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggta 1963 Query: 424 tgatcggcattcagtgat 441 || ||||| || ||||| Sbjct: 1962 ggagcggcactcggtgat 1945
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 123 bits (62), Expect = 8e-25 Identities = 164/198 (82%) Strand = Plus / Plus Query: 244 ttagcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgat 303 ||||||||| ||||||||| | |||||||| ||||||||||||||||||| | || || Sbjct: 25011623 ttagcagatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaat 25011682 Query: 304 gtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagt 363 ||||||||| | ||| || || || | |||||||| || || |||||||| |||| || Sbjct: 25011683 gtgcttgccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 25011742 Query: 364 cttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||||||||||| | |||| | ||||| ||||||| ||||||||||||||| |||||||| Sbjct: 25011743 cttctcgccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggta 25011802 Query: 424 tgatcggcattcagtgat 441 || ||||| || ||||| Sbjct: 25011803 ggagcggcactcggtgat 25011820 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | |||||||| Sbjct: 25025220 agcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgt 25025279 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||| | ||| ||||| |||| ||||||| || || ||||| || || | |||| Sbjct: 25025280 gcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgtct 25025339 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagag 417 |||||||||||| ||||| |||||| ||||||| |||||| ||||||||||| Sbjct: 25025340 tctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagag 25025391 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 276 ccttgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacacct 335 ||||||| || || ||||| | |||||||||||||| || ||| || || || | ||||| Sbjct: 25004107 ccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatggcgacgagcacct 25004166 Query: 336 tgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagct 395 ||| || || |||||||| |||| |||||||||||||| | |||||| || || | || Sbjct: 25004167 tgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacct 25004226 Query: 396 ccttgcgcacaaaccggtagagtgggtatgatcggca 432 ||| |||||| ||||||||||| ||||| || ||||| Sbjct: 25004227 cctcgcgcacgaaccggtagagcgggtacgagcggca 25004263 Score = 44.1 bits (22), Expect = 0.59 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Plus Query: 633 gggtagttggcgctgcagggggtcgtcnggcgtaggcg 670 ||||||||||||||||| ||||||||| |||||||||| Sbjct: 25004463 gggtagttggcgctgca-ggggtcgtc-ggcgtaggcg 25004498
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 123 bits (62), Expect = 8e-25 Identities = 164/198 (82%) Strand = Plus / Plus Query: 244 ttagcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgat 303 ||||||||| ||||||||| | |||||||| ||||||||||||||||||| | || || Sbjct: 24611 ttagcagatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaat 24670 Query: 304 gtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagt 363 ||||||||| | ||| || || || | |||||||| || || |||||||| |||| || Sbjct: 24671 gtgcttgccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 24730 Query: 364 cttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggta 423 |||||||||||| | |||| | ||||| ||||||| ||||||||||||||| |||||||| Sbjct: 24731 cttctcgccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggta 24790 Query: 424 tgatcggcattcagtgat 441 || ||||| || ||||| Sbjct: 24791 ggagcggcactcggtgat 24808 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | |||||||| Sbjct: 38208 agcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgt 38267 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||| | ||| ||||| |||| ||||||| || || ||||| || || | |||| Sbjct: 38268 gcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgtct 38327 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagag 417 |||||||||||| ||||| |||||| ||||||| |||||| ||||||||||| Sbjct: 38328 tctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagag 38379 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 276 ccttgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacacct 335 ||||||| || || ||||| | |||||||||||||| || ||| || || || | ||||| Sbjct: 17095 ccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatggcgacgagcacct 17154 Query: 336 tgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagct 395 ||| || || |||||||| |||| |||||||||||||| | |||||| || || | || Sbjct: 17155 tgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacct 17214 Query: 396 ccttgcgcacaaaccggtagagtgggtatgatcggca 432 ||| |||||| ||||||||||| ||||| || ||||| Sbjct: 17215 cctcgcgcacgaaccggtagagcgggtacgagcggca 17251 Score = 44.1 bits (22), Expect = 0.59 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Plus Query: 633 gggtagttggcgctgcagggggtcgtcnggcgtaggcg 670 ||||||||||||||||| ||||||||| |||||||||| Sbjct: 17451 gggtagttggcgctgca-ggggtcgtc-ggcgtaggcg 17486
>ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2407 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | |||||||| Sbjct: 2175 agcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgt 2116 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||| | ||| ||||| |||| ||||||| || || ||||| || || | |||| Sbjct: 2115 gcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgtct 2056 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagag 417 |||||||||||| ||||| |||||| ||||||| |||||| ||||||||||| Sbjct: 2055 tctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagag 2004
>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene Length = 4660 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | |||||||| Sbjct: 4574 agcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgt 4515 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||| | ||| ||||| |||| ||||||| || || ||||| || || | |||| Sbjct: 4514 gcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgtct 4455 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagag 417 |||||||||||| ||||| |||||| ||||||| |||||| ||||||||||| Sbjct: 4454 tctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagag 4403
>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full insert sequence Length = 2406 Score = 111 bits (56), Expect = 3e-21 Identities = 143/172 (83%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | |||||||| Sbjct: 2174 agcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgt 2115 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||| | ||| ||||| |||| ||||||| || || ||||| || || | |||| Sbjct: 2114 gcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgtct 2055 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagag 417 |||||||||||| ||||| |||||| ||||||| |||||| ||||||||||| Sbjct: 2054 tctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagag 2003
>gb|BT018802.1| Zea mays clone EL01N0529D05.d mRNA sequence Length = 1451 Score = 95.6 bits (48), Expect = 2e-16 Identities = 153/188 (81%) Strand = Plus / Minus Query: 254 ggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgtgcttgccc 313 ||||||||| | |||||||| ||||||| ||||| ||||| | |||||||||||||| | Sbjct: 1116 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgc 1057 Query: 314 ttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtcttctcgccg 373 | ||| || || || | |||||||| | || |||||||| ||||| ||| |||||||| Sbjct: 1056 tggttgatggccacgagcaccttgttgagctcctcgccgggggacctggtcctctcgccg 997 Query: 374 gtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggtatgatcggcat 433 |||| |||||| || || | ||||| |||||| |||||||| || ||||| || ||||| Sbjct: 996 gtcaggtactcggtgccgacctcctcgcgcacgaaccggtacagcgggtaggaccggcac 937 Query: 434 tcagtgat 441 |||||||| Sbjct: 936 tcagtgat 929
>gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2139 Score = 89.7 bits (45), Expect = 1e-14 Identities = 138/169 (81%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||||| |||||||| ||||||| ||||||||||| | ||| |||| Sbjct: 2137 agcagatgggcagtggctcgccgttccactccttgaggcactcaagcagcgggtcaatgt 2078 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||||| ||| || || | | |||||||| || || ||||| || |||| |||| Sbjct: 2077 gcttgccctggttgatggcgaggagcaccttgttcagctcctcgcccggcgaccgtgtct 2018 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggta 414 |||||||||| | |||||| || || ||||||| ||| ||||||||||| Sbjct: 2017 tctcgccggtgaggtactccgtcccgagctcctcgcgtacaaaccggta 1969
>ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 85.7 bits (43), Expect = 2e-13 Identities = 151/187 (80%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||| | |||||||| ||||||| ||||| ||||| | |||||||| Sbjct: 2149 agcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgt 2090 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||||| ||| || || || | |||||||| | || |||||||| |||| |||| Sbjct: 2089 gcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtct 2030 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggtatg 425 |||||||||| | ||| | || || ||||||| |||||| ||||||||||| ||||| | Sbjct: 2029 tctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacg 1970 Query: 426 atcggca 432 | ||||| Sbjct: 1969 agcggca 1963
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 85.7 bits (43), Expect = 2e-13 Identities = 151/187 (80%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||| | |||||||| ||||||| ||||| ||||| | |||||||| Sbjct: 122623 agcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgt 122682 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||||| ||| || || || | |||||||| | || |||||||| |||| |||| Sbjct: 122683 gcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtct 122742 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggtatg 425 |||||||||| | ||| | || || ||||||| |||||| ||||||||||| ||||| | Sbjct: 122743 tctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacg 122802 Query: 426 atcggca 432 | ||||| Sbjct: 122803 agcggca 122809
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 85.7 bits (43), Expect = 2e-13 Identities = 151/187 (80%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||| | |||||||| ||||||| ||||| ||||| | |||||||| Sbjct: 65204 agcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgt 65263 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||||| ||| || || || | |||||||| | || |||||||| |||| |||| Sbjct: 65264 gcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtct 65323 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggtatg 425 |||||||||| | ||| | || || ||||||| |||||| ||||||||||| ||||| | Sbjct: 65324 tctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacg 65383 Query: 426 atcggca 432 | ||||| Sbjct: 65384 agcggca 65390
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 85.7 bits (43), Expect = 2e-13 Identities = 151/187 (80%) Strand = Plus / Plus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||| ||| | |||||||| ||||||| ||||| ||||| | |||||||| Sbjct: 20809399 agcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgt 20809458 Query: 306 gcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtct 365 ||||||||| ||| || || || | |||||||| | || |||||||| |||| |||| Sbjct: 20809459 gcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtct 20809518 Query: 366 tctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggtatg 425 |||||||||| | ||| | || || ||||||| |||||| ||||||||||| ||||| | Sbjct: 20809519 tctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacg 20809578 Query: 426 atcggca 432 | ||||| Sbjct: 20809579 agcggca 20809585
>gb|AY005474.1| Triticum aestivum inducible phenylalanine ammonia-lyase mRNA, partial cds Length = 1933 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 254 ggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgtgcttgccc 313 ||||||||||| |||||||| ||||||| ||||| ||||| | |||||||||||||| | Sbjct: 1625 ggcaggggctcgccgttccactccttgaggcactccagcagcgggtcgatgtgcttgcgc 1566 Query: 314 ttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtcttctcgccg 373 | |||||| || || | |||||||| || || || ||||| || | |||||||||||| Sbjct: 1565 tcgttcatggccaccagcaccttgttcagctcctccccgggcgaacgcgtcttctcgccg 1506 Query: 374 gtcaagtactc 384 |||| |||||| Sbjct: 1505 gtcaggtactc 1495 Score = 42.1 bits (21), Expect = 2.3 Identities = 76/93 (81%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 557 gtctccacgtcgcgctccgcctcgccattggccaaggcgtgctccacaagaactgcacgc 616 ||||||| | ||||||| | ||||| ||||||| ||||||||||| || || || ||| Sbjct: 1322 gtctccagggcgcgctcgccgtcgccgttggccagcgcgtgctccaccagcaccgcccgc 1263 Query: 617 atcttctgcatgagtggggtagttggcgctgca 649 | ||||||||| || |||||||||| |||||| Sbjct: 1262 agcttctgcatcag-cgggtagttggggctgca 1231
>gb|AY104679.1| Zea mays PCO142078 mRNA sequence Length = 1864 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Minus Query: 254 ggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgtgcttgccc 313 ||||||||| | |||||||| ||||||| ||||| ||||| | |||||||||||||| | Sbjct: 1562 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgc 1503 Query: 314 ttgttcatagcaacaaacaccttgtccacttcttcgccgggagacctagtcttctcgccg 373 | ||| || || || | |||||||| | || |||||||| ||||| ||| |||||||| Sbjct: 1502 tggttgatggccacgagcaccttgttgagctcctcgccgggggacctggtcctctcgccg 1443 Query: 374 gtcaagtactctgttccaagctccttgcgcacaaaccggtagagtgggtatgatcggca 432 |||| |||||| || || | |||| |||||| |||||||| || ||||| || ||||| Sbjct: 1442 gtcaggtactcggtgccgacgtcctcgcgcacgaaccggtacagcgggtaggaccggca 1384 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 554 gacgtctccacgtcgcgctccgcctcgccattggccaaggcgtgctc 600 ||||| |||||||||||||| || ||||| ||||||| |||||||| Sbjct: 1262 gacgtgtccacgtcgcgctcggcgtcgccgttggccagcgcgtgctc 1216
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 331 caccttgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttcc 390 |||||||||||| || || |||||||||| |||||||||||||||| |||||| | || Sbjct: 110547 caccttgtccacctcctccccgggagaccgcgtcttctcgccggtcaggtactcggcgcc 110488 Query: 391 aagctccttgcgcacaaaccggtagagtgggtatgatcggca 432 |||||||||||||| |||| ||| || ||||| || ||||| Sbjct: 110487 gagctccttgcgcacgaacctgtacagcgggtacgagcggca 110446
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 331 caccttgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttcc 390 |||||||||||| || || |||||||||| |||||||||||||||| |||||| | || Sbjct: 28380615 caccttgtccacctcctccccgggagaccgcgtcttctcgccggtcaggtactcggcgcc 28380556 Query: 391 aagctccttgcgcacaaaccggtagagtgggtatgatcggca 432 |||||||||||||| |||| ||| || ||||| || ||||| Sbjct: 28380555 gagctccttgcgcacgaacctgtacagcgggtacgagcggca 28380514
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 331 caccttgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttcc 390 |||||||||||| || || |||||||||| |||||||||||||||| |||||| | || Sbjct: 28363064 caccttgtccacctcctccccgggagaccgcgtcttctcgccggtcaggtactcggcgcc 28363005 Query: 391 aagctccttgcgcacaaaccggtagagtgggtatgatcggca 432 |||||||||||||| |||| ||| || ||||| || ||||| Sbjct: 28363004 gagctccttgcgcacgaacctgtacagcgggtacgagcggca 28362963
>ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2369 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 276 ccttgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacacct 335 ||||||| || || ||||| | |||||||||||||| || ||| || || || | ||||| Sbjct: 2274 ccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatggcgacgagcacct 2215 Query: 336 tgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagct 395 ||| || || |||||||| |||| |||||||||||||| | |||||| || || | || Sbjct: 2214 tgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacct 2155 Query: 396 ccttgcgcacaaaccggtagagtgggtatgatcggca 432 ||| |||||| ||||||||||| ||||| || ||||| Sbjct: 2154 cctcgcgcacgaaccggtagagcgggtacgagcggca 2118 Score = 44.1 bits (22), Expect = 0.59 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Minus Query: 633 gggtagttggcgctgcagggggtcgtcnggcgtaggcg 670 ||||||||||||||||| ||||||||| |||||||||| Sbjct: 1918 gggtagttggcgctgca-ggggtcgtc-ggcgtaggcg 1883
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 276 ccttgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacacct 335 ||||||| || || ||||| | |||||||||||||| || ||| || || || | ||||| Sbjct: 165390 ccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatggcgacgagcacct 165449 Query: 336 tgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagct 395 ||| || || |||||||| |||| |||||||||||||| | |||||| || || | || Sbjct: 165450 tgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacct 165509 Query: 396 ccttgcgcacaaaccggtagagtgggtatgatcggca 432 ||| |||||| ||||||||||| ||||| || ||||| Sbjct: 165510 cctcgcgcacgaaccggtagagcgggtacgagcggca 165546 Score = 44.1 bits (22), Expect = 0.59 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Plus Query: 633 gggtagttggcgctgcagggggtcgtcnggcgtaggcg 670 ||||||||||||||||| ||||||||| |||||||||| Sbjct: 165746 gggtagttggcgctgca-ggggtcgtc-ggcgtaggcg 165781
>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full insert sequence Length = 2594 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 276 ccttgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacacct 335 ||||||| || || ||||| | |||||||||||||| || ||| || || || | ||||| Sbjct: 2274 ccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatggcgacgagcacct 2215 Query: 336 tgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagct 395 ||| || || |||||||| |||| |||||||||||||| | |||||| || || | || Sbjct: 2214 tgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacct 2155 Query: 396 ccttgcgcacaaaccggtagagtgggtatgatcggca 432 ||| |||||| ||||||||||| ||||| || ||||| Sbjct: 2154 cctcgcgcacgaaccggtagagcgggtacgagcggca 2118 Score = 44.1 bits (22), Expect = 0.59 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Minus Query: 633 gggtagttggcgctgcagggggtcgtcnggcgtaggcg 670 ||||||||||||||||| ||||||||| |||||||||| Sbjct: 1918 gggtagttggcgctgca-ggggtcgtc-ggcgtaggcg 1883
>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) Length = 4843 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 276 ccttgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacacct 335 ||||||| || || ||||| | |||||||||||||| || ||| || || || | ||||| Sbjct: 4703 ccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatggcgacgagcacct 4644 Query: 336 tgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagct 395 ||| || || |||||||| |||| |||||||||||||| | |||||| || || | || Sbjct: 4643 tgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacct 4584 Query: 396 ccttgcgcacaaaccggtagagtgggtatgatcggca 432 ||| |||||| ||||||||||| ||||| || ||||| Sbjct: 4583 cctcgcgcacgaaccggtagagcgggtacgagcggca 4547 Score = 44.1 bits (22), Expect = 0.59 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Minus Query: 633 gggtagttggcgctgcagggggtcgtcnggcgtaggcg 670 ||||||||||||||||| ||||||||| |||||||||| Sbjct: 4347 gggtagttggcgctgca-ggggtcgtc-ggcgtaggcg 4312
>dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F15, full insert sequence Length = 1835 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 276 ccttgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacacct 335 ||||||| || || ||||| | |||||||||||||| || ||| || || || | ||||| Sbjct: 1515 ccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatggcgacgagcacct 1456 Query: 336 tgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagct 395 ||| || || |||||||| |||| |||||||||||||| | |||||| || || | || Sbjct: 1455 tgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacct 1396 Query: 396 ccttgcgcacaaaccggtagagtgggtatgatcggca 432 ||| |||||| ||||||||||| ||||| || ||||| Sbjct: 1395 cctcgcgcacgaaccggtagagcgggtacgagcggca 1359 Score = 44.1 bits (22), Expect = 0.59 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Minus Query: 633 gggtagttggcgctgcagggggtcgtcnggcgtaggcg 670 ||||||||||||||||| ||||||||| |||||||||| Sbjct: 1159 gggtagttggcgctgca-ggggtcgtc-ggcgtaggcg 1124
>dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G01, full insert sequence Length = 1589 Score = 73.8 bits (37), Expect = 7e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 276 ccttgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacacct 335 ||||||| || || ||||| | |||||||||||||| || ||| || || || | ||||| Sbjct: 1231 ccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatggcgacgagcacct 1172 Query: 336 tgtccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagct 395 ||| || || |||||||| |||| |||||||||||||| | |||||| || || | || Sbjct: 1171 tgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtactcggtgccgacct 1112 Query: 396 ccttgcgcacaaaccggtagagtgggtatgatcggca 432 ||| |||||| ||||||||||| ||||| || ||||| Sbjct: 1111 cctcgcgcacgaaccggtagagcgggtacgagcggca 1075 Score = 44.1 bits (22), Expect = 0.59 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Minus Query: 633 gggtagttggcgctgcagggggtcgtcnggcgtaggcg 670 ||||||||||||||||| ||||||||| |||||||||| Sbjct: 875 gggtagttggcgctgca-ggggtcgtc-ggcgtaggcg 840
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 279 tgagacactcaagcagtgcgtcgatgtgcttgcccttgttcatagcaacaaacaccttgt 338 |||| ||||| ||||||| || |||||||||| || |||||| || | | |||||||| Sbjct: 175794 tgaggcactccagcagtgggttgatgtgcttgtgctggttcatggcgatcaccaccttgt 175853 Query: 339 ccacttcttcgccgggagacctagtcttctcgccggtcaagtactctgttccaagctcct 398 |||| || || ||||| |||| |||||||||||||||| |||||| | || ||||||| Sbjct: 175854 ccacctcctccccgggcgaccgcgtcttctcgccggtcaggtactcggcgccgagctcct 175913 Query: 399 tgcgcacaaaccggtagagtgggta 423 ||||||| |||| ||| || ||||| Sbjct: 175914 tgcgcacgaacctgtacagcgggta 175938
>gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12, complete sequence Length = 131944 Score = 61.9 bits (31), Expect = 2e-06 Identities = 101/124 (81%), Gaps = 4/124 (3%) Strand = Plus / Plus Query: 298 gtcgatgtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggaga 357 ||||||||||||||||| |||||| || || |||||||||| ||| || || ||||| || Sbjct: 111851 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 111910 Query: 358 cctag----tcttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggt 413 || | |||||| ||||||||||||||||| | |||||||||| || ||||||| Sbjct: 111911 ccgcgtcgatcttcttcccggtcaagtactctgtcctgagctccttgcagacgaaccggt 111970 Query: 414 agag 417 |||| Sbjct: 111971 agag 111974 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 363 tcttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagag 417 ||||||| || |||||||||||| | || ||||||||||| || ||||||||||| Sbjct: 111394 tcttctccccagtcaagtactctatcccgagctccttgcggacgaaccggtagag 111448
>gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0024A05, complete sequence Length = 82985 Score = 61.9 bits (31), Expect = 2e-06 Identities = 101/124 (81%), Gaps = 4/124 (3%) Strand = Plus / Plus Query: 298 gtcgatgtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggaga 357 ||||||||||||||||| |||||| || || |||||||||| ||| || || ||||| || Sbjct: 6370 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 6429 Query: 358 cctag----tcttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggt 413 || | |||||| ||||||||||||||||| | |||||||||| || ||||||| Sbjct: 6430 ccgcgtcgatcttcttcccggtcaagtactctgtcctgagctccttgcagacgaaccggt 6489 Query: 414 agag 417 |||| Sbjct: 6490 agag 6493 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 363 tcttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagag 417 ||||||| || |||||||||||| | || ||||||||||| || ||||||||||| Sbjct: 5913 tcttctccccagtcaagtactctatcccgagctccttgcggacgaaccggtagag 5967
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 101/124 (81%), Gaps = 4/124 (3%) Strand = Plus / Minus Query: 298 gtcgatgtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggaga 357 ||||||||||||||||| |||||| || || |||||||||| ||| || || ||||| || Sbjct: 12907320 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 12907261 Query: 358 cctag----tcttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggt 413 || | |||||| ||||||||||||||||| | |||||||||| || ||||||| Sbjct: 12907260 ccgcgtcgatcttcttcccggtcaagtactctgtcctgagctccttgcagacgaaccggt 12907201 Query: 414 agag 417 |||| Sbjct: 12907200 agag 12907197 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 363 tcttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagag 417 ||||||| || |||||||||||| | || ||||||||||| || ||||||||||| Sbjct: 12907777 tcttctccccagtcaagtactctatcccgagctccttgcggacgaaccggtagag 12907723 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ttatcagctaagaacatctg 193 |||||||||||||||||||| Sbjct: 391465 ttatcagctaagaacatctg 391446
>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone: B1052H09 Length = 190806 Score = 61.9 bits (31), Expect = 2e-06 Identities = 101/124 (81%), Gaps = 4/124 (3%) Strand = Plus / Minus Query: 298 gtcgatgtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggaga 357 ||||||||||||||||| |||||| || || |||||||||| ||| || || ||||| || Sbjct: 44300 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 44241 Query: 358 cctag----tcttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggt 413 || | |||||| ||||||||||||||||| | |||||||||| || ||||||| Sbjct: 44240 ccgcgtcgatcttcttcccggtcaagtactctgtcctgagctccttgcagacgaaccggt 44181 Query: 414 agag 417 |||| Sbjct: 44180 agag 44177 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 363 tcttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagag 417 ||||||| || |||||||||||| | || ||||||||||| || ||||||||||| Sbjct: 44757 tcttctccccagtcaagtactctatcccgagctccttgcggacgaaccggtagag 44703
>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0061E21 Length = 155085 Score = 61.9 bits (31), Expect = 2e-06 Identities = 101/124 (81%), Gaps = 4/124 (3%) Strand = Plus / Minus Query: 298 gtcgatgtgcttgcccttgttcatagcaacaaacaccttgtccacttcttcgccgggaga 357 ||||||||||||||||| |||||| || || |||||||||| ||| || || ||||| || Sbjct: 107838 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 107779 Query: 358 cctag----tcttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggt 413 || | |||||| ||||||||||||||||| | |||||||||| || ||||||| Sbjct: 107778 ccgcgtcgatcttcttcccggtcaagtactctgtcctgagctccttgcagacgaaccggt 107719 Query: 414 agag 417 |||| Sbjct: 107718 agag 107715 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 363 tcttctcgccggtcaagtactctgttccaagctccttgcgcacaaaccggtagag 417 ||||||| || |||||||||||| | || ||||||||||| || ||||||||||| Sbjct: 108295 tcttctccccagtcaagtactctatcccgagctccttgcggacgaaccggtagag 108241
>ref|XM_473192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | ||||||| Sbjct: 2122 agcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatga 2063 Query: 306 gcttgc 311 |||||| Sbjct: 2062 gcttgc 2057
>gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24080 phenylalanine ammonia-lyase mRNA, complete cds Length = 2016 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | ||||||| Sbjct: 2014 agcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatga 1955 Query: 306 gcttgc 311 |||||| Sbjct: 1954 gcttgc 1949
>dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082J11, full insert sequence Length = 2510 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 246 agcagataggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgt 305 ||||||| ||||||||||| |||||||| ||||||| ||||| |||| | ||||||| Sbjct: 2214 agcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatga 2155 Query: 306 gcttgc 311 |||||| Sbjct: 2154 gcttgc 2149
>gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia-lyase mRNA, complete cds Length = 2353 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 254 ggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgtgcttgccc 313 ||||||||||| |||||||| ||||||| ||||| |||| | ||||||| |||||||| Sbjct: 2097 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgccc 2038 Query: 314 t 314 | Sbjct: 2037 t 2037
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 568 gcgctccgcctcgccattggcca 590 ||||||||||||||||||||||| Sbjct: 36318 gcgctccgcctcgccattggcca 36340
>ref|XM_940865.1| PREDICTED: Homo sapiens hypothetical protein LOC651660 (LOC651660), mRNA Length = 859 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 105 ggcagctctataagaacaatacaaaac 131 ||||||||||||| ||||||||||||| Sbjct: 263 ggcagctctataaaaacaatacaaaac 237
>ref|XM_928006.1| PREDICTED: Homo sapiens hypothetical protein LOC644919 (LOC644919), mRNA Length = 859 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 105 ggcagctctataagaacaatacaaaac 131 ||||||||||||| ||||||||||||| Sbjct: 263 ggcagctctataaaaacaatacaaaac 237
>emb|AL451071.3|CNS07EEZ Human chromosome 14 DNA sequence BAC R-779M2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 200109 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 105 ggcagctctataagaacaatacaaaac 131 ||||||||||||| ||||||||||||| Sbjct: 7962 ggcagctctataaaaacaatacaaaac 7988
>emb|BX248273.1|CNSLT1I85 human full-length cDNA clone CS0DC023YN15 of Neuroblastoma of Homo sapiens (human) Length = 884 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 105 ggcagctctataagaacaatacaaaac 131 ||||||||||||| ||||||||||||| Sbjct: 270 ggcagctctataaaaacaatacaaaac 244
>gb|U61094.1|HSU61094 Human NTera2D1 cell line mRNA containing L1 retroposon, clone P6 Length = 279 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 105 ggcagctctataagaacaatacaaaac 131 ||||||||||||| ||||||||||||| Sbjct: 200 ggcagctctataaaaacaatacaaaac 174
>emb|AL390815.5|CNS06C7U Human chromosome 14 DNA sequence BAC R-129M6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155350 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 105 ggcagctctataagaacaatacaaaac 131 ||||||||||||| ||||||||||||| Sbjct: 49032 ggcagctctataaaaacaatacaaaac 49006
>gb|AC147676.10| Canis Familiaris, clone XX-25H12, complete sequence Length = 203436 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 aagaatatccaatggaaaaaca 163 |||||||||||||||||||||| Sbjct: 160458 aagaatatccaatggaaaaaca 160479
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp) Length = 1831 Score = 44.1 bits (22), Expect = 0.59 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 592 ggcgtgctccacaagaactgcacgcatcttctgcatgagtggggtagttggcgctgca 649 |||||| ||||| || || || |||| ||||||||| |||||| |||||||||||||| Sbjct: 1145 ggcgtggtccacgagcacggcgcgcagcttctgcatcagtggg-tagttggcgctgca 1089 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Minus Query: 254 ggcaggggctcaccgttccaacccttgagacactcaagcagtgcgtcgatgtgcttg 310 ||||||||||| |||||||| ||||||| ||||| |||| | ||||||| ||||| Sbjct: 1483 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 1427
>gb|AC091519.16| Mus musculus strain 129/SvJ chromosome 2 clone mgs1-452h5, complete sequence Length = 229220 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 560 tccacgtcgcgctccgcctcgccat 584 ||||||||| ||||||||||||||| Sbjct: 82098 tccacgtcgggctccgcctcgccat 82122
>ref|XM_391283.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11107.1) partial mRNA Length = 2166 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 494 acctcctttggcaacattgca 514 ||||||||||||||||||||| Sbjct: 1988 acctcctttggcaacattgca 1968
>ref|XM_448902.1| Candida glabrata CBS138, CAGL0L03003g partial mRNA Length = 918 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 caacaaacaccttgtccactt 344 ||||||||||||||||||||| Sbjct: 589 caacaaacaccttgtccactt 569
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 caacaaacaccttgtccactt 344 ||||||||||||||||||||| Sbjct: 348462 caacaaacaccttgtccactt 348442
>emb|AL845258.5| Mouse DNA sequence from clone RP23-315H12 on chromosome 2, complete sequence Length = 164324 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 560 tccacgtcgcgctccgcctcgccat 584 ||||||||| ||||||||||||||| Sbjct: 57783 tccacgtcgggctccgcctcgccat 57759
>gb|AY083607.1| Candida glabrata strain ATCC 2001 GCN3 region, partial sequence Length = 16408 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 caacaaacaccttgtccactt 344 ||||||||||||||||||||| Sbjct: 3986 caacaaacaccttgtccactt 4006
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 562 cacgtcgcgctccgcctcgcc 582 ||||||||||||||||||||| Sbjct: 2485791 cacgtcgcgctccgcctcgcc 2485771
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 aacagtgttatcacttatcag 180 ||||||||||||||||||||| Sbjct: 32731216 aacagtgttatcacttatcag 32731196
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 aacagtgttatcacttatcag 180 ||||||||||||||||||||| Sbjct: 94011 aacagtgttatcacttatcag 93991
>dbj|BS000028.1| Pan troglodytes chromosome 22 clone:PTB-087F19, map 22, complete sequences Length = 223409 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 cttgatccttagcagataggc 256 ||||||||||||||||||||| Sbjct: 152734 cttgatccttagcagataggc 152754
>gb|AF411134.1| Lactuca sativa phenylalanine ammonia-lyase2 mRNA, complete cds Length = 2380 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 384 ctgttccaagctccttgcgcacaaaccggtagagtgggtatgatc 428 ||||||||||||||| | |||||||| ||| | ||||||||||| Sbjct: 2078 ctgttccaagctcctctctcacaaacctgtacaatgggtatgatc 2034
>dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, section 11/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 cttgatccttagcagataggc 256 ||||||||||||||||||||| Sbjct: 249865 cttgatccttagcagataggc 249885
>emb|X99395.1|MMENOGD M.musculus gene encoding endonuclease G Length = 3525 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 560 tccacgtcgcgctccgcctcgccat 584 ||||||||| ||||||||||||||| Sbjct: 725 tccacgtcgggctccgcctcgccat 701
>gb|M84466.1|TOBTPA1A Tobacco phenylalanine ammonialyase (tpa1) gene, complete cds Length = 6976 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 383 tctgttccaagctccttgcgcacaaaccggtagagtgggtatgatcggcattc 435 ||||||||||||||||| | |||||||| ||| | ||| || |||| |||||| Sbjct: 5694 tctgttccaagctcctttctcacaaacctgtacaatggataagatctgcattc 5642
>dbj|AB008200.1| Nicotiana tabacum palB gene for phenylalanine ammonia-lyase, complete cds Length = 6306 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 383 tctgttccaagctccttgcgcacaaaccggtagagtgggtatgatcggcattc 435 ||||||||||||||||| | |||||||| ||| | ||| || |||| |||||| Sbjct: 4994 tctgttccaagctcctttctcacaaacctgtacaatggataagatctgcattc 4942
>dbj|AP000962.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B821P16, LL56-APP region, complete sequence Length = 185300 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 cttgatccttagcagataggc 256 ||||||||||||||||||||| Sbjct: 181409 cttgatccttagcagataggc 181429
>ref|NM_115008.1| Arabidopsis thaliana carbohydrate transporter/ nucleoside transporter/ sugar porter AT3G51490 mRNA, complete cds Length = 2190 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 acctcctttggcaacattgc 513 |||||||||||||||||||| Sbjct: 1481 acctcctttggcaacattgc 1462
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tttttggcaacaacccggca 108 |||||||||||||||||||| Sbjct: 1048011 tttttggcaacaacccggca 1047992
>gb|AC154314.2| Mus musculus BAC clone RP23-347J22 from chromosome 13, complete sequence Length = 189556 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 catggcaagcttggcaaaca 551 |||||||||||||||||||| Sbjct: 103133 catggcaagcttggcaaaca 103114
>gb|AC161050.2| Mus musculus BAC clone RP23-477C12 from chromosome 12, complete sequence Length = 197084 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 caaacaccttgtccacttct 346 |||||||||||||||||||| Sbjct: 172344 caaacaccttgtccacttct 172363
>gb|AC087731.2| Felis catus clone RP86-459O8, complete sequence Length = 125661 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagaatatccaatggaaaaa 161 |||||||||||||||||||| Sbjct: 43420 aagaatatccaatggaaaaa 43401
>gb|AC091094.2| Felis catus clone RP86-317G18, complete sequence Length = 134762 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagaatatccaatggaaaaa 161 |||||||||||||||||||| Sbjct: 74415 aagaatatccaatggaaaaa 74396 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagaatatccaatggaaaaa 161 |||||||||||||||||||| Sbjct: 72403 aagaatatccaatggaaaaa 72384
>gb|AC091382.3| Felis catus clone RP86-264L24, complete sequence Length = 128743 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagaatatccaatggaaaaa 161 |||||||||||||||||||| Sbjct: 28417 aagaatatccaatggaaaaa 28398
>gb|AC089994.2| Felis catus clone RP86-181L4, complete sequence Length = 142512 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagaatatccaatggaaaaa 161 |||||||||||||||||||| Sbjct: 38848 aagaatatccaatggaaaaa 38829
>gb|AC159647.2| Mus musculus BAC clone RP23-66A14 from chromosome 12, complete sequence Length = 213946 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 48 ttctactggctacataccactaccaaag 75 ||||||||||||| | |||||||||||| Sbjct: 46551 ttctactggctacttcccactaccaaag 46578
>emb|AL109920.15|HSDJ335E1 Human DNA sequence from clone RP3-335E1 on chromosome 6q16.2-21 Contains a CpG island, complete sequence Length = 143805 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gttcatagcaacaaacacct 335 |||||||||||||||||||| Sbjct: 17563 gttcatagcaacaaacacct 17582
>gb|AY152833.1| Felis catus clone BAC 244e2 major histocompatiblity complex classical class II region, partial sequence Length = 147595 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagaatatccaatggaaaaa 161 |||||||||||||||||||| Sbjct: 5279 aagaatatccaatggaaaaa 5260
>gb|AY152831.1| Felis catus clone PAC 6B1 major histocompatiblity complex classical class II region, partial sequence Length = 60089 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagaatatccaatggaaaaa 161 |||||||||||||||||||| Sbjct: 29103 aagaatatccaatggaaaaa 29084
>emb|X78269.1|NTPHEAL N.tabacum (Samsun NN) mRNA for phenylalanine ammonia-lyase Length = 2462 Score = 40.1 bits (20), Expect = 9.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 620 ttctgcatgagtggggtagttggcgctgcagg 651 |||||||| |||||| |||||||||||||||| Sbjct: 1884 ttctgcatcagtggg-tagttggcgctgcagg 1854
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 156 gaaaaacagtgttatcacttatcagcta 183 ||||||||| || ||||||||||||||| Sbjct: 2768051 gaaaaacagcgtaatcacttatcagcta 2768078
>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13 Length = 94349 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 acctcctttggcaacattgc 513 |||||||||||||||||||| Sbjct: 51644 acctcctttggcaacattgc 51663
>emb|AJ630363.1| Canis familiaris MHC class II region on chromosome CFA12, partial sequence, BAC clones 224p2 and 282j14, containing DLA-DQA1 gene, DLA-DQB1 gene and DLA-DQB pseudogene Length = 180560 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aagaatatccaatggaaaaa 161 |||||||||||||||||||| Sbjct: 163237 aagaatatccaatggaaaaa 163256
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 ccacgtcgcgctccgcctcg 580 |||||||||||||||||||| Sbjct: 60978 ccacgtcgcgctccgcctcg 60959
>gb|AC025678.7| Homo sapiens chromosome 15, clone RP11-602M11, complete sequence Length = 189533 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcaattgcaatttttggcaa 98 |||||||||||||||||||| Sbjct: 170513 gcaattgcaatttttggcaa 170494
>gb|DQ270924.1| Mustela vison clone V3N9 microsatellite sequence Length = 522 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagaatatccaatggaaaaa 161 |||||||||||||||||||| Sbjct: 202 aagaatatccaatggaaaaa 183
>gb|DP000032.1| Felis catus target 116 genomic scaffold Length = 376810 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aagaatatccaatggaaaaa 161 |||||||||||||||||||| Sbjct: 329271 aagaatatccaatggaaaaa 329290
>gb|AC159622.2| Mus musculus BAC clone RP24-289D12 from chromosome 12, complete sequence Length = 174662 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 caaacaccttgtccacttct 346 |||||||||||||||||||| Sbjct: 107407 caaacaccttgtccacttct 107388
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 tccacgtcgcgctccgcctc 579 |||||||||||||||||||| Sbjct: 4112815 tccacgtcgcgctccgcctc 4112796
>gb|AC009714.17| Homo sapiens chromosome 15, clone RP11-438P7, complete sequence Length = 22979 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcaattgcaatttttggcaa 98 |||||||||||||||||||| Sbjct: 1957 gcaattgcaatttttggcaa 1938
>gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome unknown, complete sequence Length = 239189 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gcagctctataagaacaata 125 |||||||||||||||||||| Sbjct: 75591 gcagctctataagaacaata 75610
>dbj|BS000126.1| Pan troglodytes chromosome 22 clone:PTB-128A24, map 22, complete sequences Length = 207747 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 atgtgcttgcccttgttcatagca 325 |||||||||||| ||||||||||| Sbjct: 61732 atgtgcttgcccatgttcatagca 61755
>emb|BX546504.9| Mouse DNA sequence from clone RP23-78N22 on chromosome X, complete sequence Length = 107447 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gcagctctataagaacaata 125 |||||||||||||||||||| Sbjct: 26728 gcagctctataagaacaata 26747
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ttatcagctaagaacatctg 193 |||||||||||||||||||| Sbjct: 100979 ttatcagctaagaacatctg 100960
>emb|AJ532571.1|ATH532571 Arabidopsis thaliana mRNA for monosaccharide sensing protein 3 (mssp3 gene) Length = 2190 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 acctcctttggcaacattgc 513 |||||||||||||||||||| Sbjct: 1481 acctcctttggcaacattgc 1462
>dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, section 74/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 atgtgcttgcccttgttcatagca 325 |||||||||||| ||||||||||| Sbjct: 224116 atgtgcttgcccatgttcatagca 224139
>emb|AL627205.12| Mouse DNA sequence from clone RP23-41E14 on chromosome 11, complete sequence Length = 223794 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ttatcacttatcagctaaga 186 |||||||||||||||||||| Sbjct: 84776 ttatcacttatcagctaaga 84757
>dbj|AP000159.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 11/16, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 atgtgcttgcccttgttcatagca 325 |||||||||||| ||||||||||| Sbjct: 71533 atgtgcttgcccatgttcatagca 71556
>dbj|AP000018.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 9/13 Length = 100000 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 atgtgcttgcccttgttcatagca 325 |||||||||||| ||||||||||| Sbjct: 5929 atgtgcttgcccatgttcatagca 5952
>dbj|AP001410.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:7A4, LB7T-ERG region, complete sequence Length = 39834 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 atgtgcttgcccttgttcatagca 325 |||||||||||| ||||||||||| Sbjct: 4623 atgtgcttgcccatgttcatagca 4646 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,117,439 Number of Sequences: 3902068 Number of extensions: 5117439 Number of successful extensions: 109646 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 108737 Number of HSP's gapped (non-prelim): 875 length of query: 670 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 647 effective length of database: 17,143,297,704 effective search space: 11091713614488 effective search space used: 11091713614488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
