| Clone Name | rbags22b24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017257.1| Zea mays clone EL01N0308D08.c mRNA sequence Length = 718 Score = 349 bits (176), Expect = 7e-93 Identities = 347/400 (86%), Gaps = 3/400 (0%) Strand = Plus / Minus Query: 168 acaagacaccatcaccagtccaagcccctgaaaaactgtgtcacacgaggcccatcacac 227 |||||||||||||||||||||||||| |||||||| |||||| | ||||||||||||||| Sbjct: 492 acaagacaccatcaccagtccaagcctctgaaaaa-tgtgtcgc-cgaggcccatcacac 435 Query: 228 tgaaaggtctt-gataaatcatatgagaagcttctcgatggcatccttgagactctggat 286 |||||| |||| | ||||||| |||||||||||||| || | |||||||||| ||| || Sbjct: 434 tgaaagatcttaggtaaatcagatgagaagcttctcaatcgagtccttgagaccctgtat 375 Query: 287 cggctgcttcagttggctaccctcattgctggtcactgaacaagcaatgaccggcctagt 346 | | || ||||| |||||||||||||||||||||||||| ||||||||||| || || || Sbjct: 374 ctgttgtttcagctggctaccctcattgctggtcactgagcaagcaatgacgggtcttgt 315 Query: 347 cactccacaagcacgcccaagggcttgctttgaagggacaaagacatacggcacattctt 406 ||| ||||||||||| ||||| ||||| || || || ||||| ||||| || || ||||| Sbjct: 314 cacaccacaagcacggccaagagcttgtttcgatggaacaaatacatatgggacgttctt 255 Query: 407 gtcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgccat 466 ||||| || | ||| ||||||||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 254 atcctcggctaacaaggggaggtggagcaggatctcgagaggctccgtgtccgccgccat 195 Query: 467 caccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctcccttctt 526 ||| |||||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 194 cacaacgaactccgatatccccctattcagggttttcgtcgcttcgttcgctcccttctt 135 Query: 527 gagctgcttgtagttggcggcctgctggacgatgtcgagg 566 ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 134 gagctgcttgtagttggcggcctgctggatgatatcgagg 95
>gb|BT018105.1| Zea mays clone EL01N0553D01.c mRNA sequence Length = 791 Score = 301 bits (152), Expect = 1e-78 Identities = 341/400 (85%), Gaps = 3/400 (0%) Strand = Plus / Minus Query: 168 acaagacaccatcaccagtccaagcccctgaaaaactgtgtcacacgaggcccatcacac 227 |||||||||||||||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 611 acaagacaccatcaccagtccaagcctctgaaaaaa-gtgtcgct-gaggcccatcacac 554 Query: 228 tgaaaggtctt-gataaatcatatgagaagcttctcgatggcatccttgagactctggat 286 ||||||||||| | | |||| |||||||||||||| |||| |||||||||| ||| || Sbjct: 553 tgaaaggtcttcggcagatcagatgagaagcttctcaatggagtccttgagaccctgtat 494 Query: 287 cggctgcttcagttggctaccctcattgctggtcactgaacaagcaatgaccggcctagt 346 | | | ||||| |||||||||||||| ||||||||||| |||||||| ||||| || || Sbjct: 493 ctgtagtttcagctggctaccctcattactggtcactgagcaagcaataaccggtcttgt 434 Query: 347 cactccacaagcacgcccaagggcttgctttgaagggacaaagacatacggcacattctt 406 ||| ||||||||||| ||||| |||||||| || || ||||| ||||| ||||| ||||| Sbjct: 433 cacaccacaagcacggccaagagcttgcttcgatggaacaaacacatatggcacgttctt 374 Query: 407 gtcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgccat 466 ||||| || | ||| ||||||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 373 atcctcagctaacaaggggaggtggagcaggatctcgagaggctctgtgtccgccgccat 314 Query: 467 caccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctcccttctt 526 ||| || ||||||||||| ||||| || || ||||| |||||||| || ||||||||||| Sbjct: 313 cactacaaactccgatatgcccctattcagggtcttcgtcgcttcattcgctcccttctt 254 Query: 527 gagctgcttgtagttggcggcctgctggacgatgtcgagg 566 ||||| |||||||||||||||||||||| ||| |||||| Sbjct: 253 aagctgtttgtagttggcggcctgctggatgatatcgagg 214
>gb|AY103642.1| Zea mays PCO105720 mRNA sequence Length = 1169 Score = 301 bits (152), Expect = 1e-78 Identities = 341/400 (85%), Gaps = 3/400 (0%) Strand = Plus / Minus Query: 168 acaagacaccatcaccagtccaagcccctgaaaaactgtgtcacacgaggcccatcacac 227 |||||||||||||||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 601 acaagacaccatcaccagtccaagcctctgaaaaaa-gtgtcg-atgaggcccatcacac 544 Query: 228 tgaaaggtctt-gataaatcatatgagaagcttctcgatggcatccttgagactctggat 286 ||||||||||| | | |||| |||||||||||||| |||| |||||||||| ||| || Sbjct: 543 tgaaaggtcttcggcagatcagatgagaagcttctcaatggagtccttgagaccctgtat 484 Query: 287 cggctgcttcagttggctaccctcattgctggtcactgaacaagcaatgaccggcctagt 346 | | | ||||| |||||||||||||| ||||||||||| |||||||| ||||| || || Sbjct: 483 ctgtagtttcagctggctaccctcattactggtcactgagcaagcaataaccggtcttgt 424 Query: 347 cactccacaagcacgcccaagggcttgctttgaagggacaaagacatacggcacattctt 406 ||| ||||||||||| ||||| |||||||| || || ||||| ||||| ||||| ||||| Sbjct: 423 cacaccacaagcacggccaagagcttgcttcgatggaacaaacacatatggcacgttctt 364 Query: 407 gtcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgccat 466 ||||| || | ||| ||||||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 363 atcctcagctaacaaggggaggtggagcaggatctcgagaggctctgtgtccgccgccat 304 Query: 467 caccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctcccttctt 526 ||| || ||||||||||| ||||| || || ||||| |||||||| || ||||||||||| Sbjct: 303 cactacaaactccgatatgcccctattcagggtcttcgtcgcttcattcgctcccttctt 244 Query: 527 gagctgcttgtagttggcggcctgctggacgatgtcgagg 566 ||||| |||||||||||||||||||||| ||| |||||| Sbjct: 243 aagctgtttgtagttggcggcctgctggatgatatcgagg 204
>ref|NM_194676.1| Oryza sativa (japonica cultivar-group) putative ribosomal protein L7Ae-like (OSJNBa0056A20.5), mRNA Length = 381 Score = 214 bits (108), Expect = 3e-52 Identities = 210/244 (86%) Strand = Plus / Minus Query: 307 cctcattgctggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaa 366 |||||||||||||||| || || || || || ||||| ||||| ||||| ||||| || | Sbjct: 319 cctcattgctggtcaccgagcaggcgatcacgggcctcgtcaccccacatgcacggccga 260 Query: 367 gggcttgctttgaagggacaaagacatacggcacattcttgtcctccgcgagcaacggga 426 | ||||||||||| ||||||||||| || ||||||||||||||||| ||||| | || | Sbjct: 259 gagcttgctttgatgggacaaagacgtatggcacattcttgtcctcggcgaggaggggaa 200 Query: 427 ggtggaggaggatttcgagcggctccgtgtcagctgccatcaccacgaactccgatattc 486 ||||||| ||||| ||||| ||||| | ||| || ||||||||||||||||||| || | Sbjct: 199 ggtggagaaggatctcgaggggctcggcgtcggccgccatcaccacgaactccgcgatcc 140 Query: 487 ccctgttgagagtcttggtcgcttcgttggctcccttcttgagctgcttgtagttggcgg 546 | |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139 ctctgttgagcgtcttcgtcgcttcgttggcgcccttcttgagctgcttgtagttggcgg 80 Query: 547 cctg 550 |||| Sbjct: 79 cctg 76
>dbj|AK121991.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109K13, full insert sequence Length = 675 Score = 214 bits (108), Expect = 3e-52 Identities = 210/244 (86%) Strand = Plus / Minus Query: 307 cctcattgctggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaa 366 |||||||||||||||| || || || || || ||||| ||||| ||||| ||||| || | Sbjct: 390 cctcattgctggtcaccgagcaggcgatcacgggcctcgtcaccccacatgcacggccga 331 Query: 367 gggcttgctttgaagggacaaagacatacggcacattcttgtcctccgcgagcaacggga 426 | ||||||||||| ||||||||||| || ||||||||||||||||| ||||| | || | Sbjct: 330 gagcttgctttgatgggacaaagacgtatggcacattcttgtcctcggcgaggaggggaa 271 Query: 427 ggtggaggaggatttcgagcggctccgtgtcagctgccatcaccacgaactccgatattc 486 ||||||| ||||| ||||| ||||| | ||| || ||||||||||||||||||| || | Sbjct: 270 ggtggagaaggatctcgaggggctcggcgtcggccgccatcaccacgaactccgcgatcc 211 Query: 487 ccctgttgagagtcttggtcgcttcgttggctcccttcttgagctgcttgtagttggcgg 546 | |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 210 ctctgttgagcgtcttcgtcgcttcgttggcgcccttcttgagctgcttgtagttggcgg 151 Query: 547 cctg 550 |||| Sbjct: 150 cctg 147
>gb|AY389676.1| Hyacinthus orientalis ribosomal protein L7 (RPL7) mRNA, complete cds Length = 675 Score = 155 bits (78), Expect = 2e-34 Identities = 165/194 (85%) Strand = Plus / Minus Query: 363 ccaagggcttgctttgaagggacaaagacatacggcacattcttgtcctccgcgagcaac 422 ||||| ||||| || ||||| ||||||||||| ||||||||||||||||| || |||| Sbjct: 303 ccaagtgcttgtttggaaggaacaaagacatagggcacattcttgtcctcagcaagcaga 244 Query: 423 gggaggtggaggaggatttcgagcggctccgtgtcagctgccatcaccacgaactccgat 482 || ||||| || || |||||||| ||||| | ||| || |||||||| || |||||||| Sbjct: 243 ggaaggtgaagaagaatttcgaggggctcagcgtccgcagccatcacaacaaactccgag 184 Query: 483 attcccctgttgagagtcttggtcgcttcgttggctcccttcttgagctgcttgtagttg 542 ||||||||||| |||||||| |||||||| || || ||||| |||||||||||||| ||| Sbjct: 183 attcccctgttcagagtcttagtcgcttcattagcaccctttttgagctgcttgtaattg 124 Query: 543 gcggcctgctggac 556 || ||||||||||| Sbjct: 123 gccgcctgctggac 110
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 139 bits (70), Expect = 1e-29 Identities = 104/114 (91%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 161 ctagcagacaagacaccatcaccagtccaagcccctgaaaaactgtgtcacac-gaggcc 219 |||||| | |||||||||||||||||||||||| ||||||||||||||| | | |||||| Sbjct: 7447561 ctagcaaataagacaccatcaccagtccaagcctctgaaaaactgtgtcgctctgaggcc 7447502 Query: 220 catcacactgaaaggtcttgataaatcatatgagaagcttctcgatggcatcct 273 |||||||||||||||||||| ||||||| ||||| ||||||||||| ||||||| Sbjct: 7447501 catcacactgaaaggtcttggtaaatcaaatgaggagcttctcgatagcatcct 7447448 Score = 123 bits (62), Expect = 8e-25 Identities = 94/102 (92%), Gaps = 2/102 (1%) Strand = Plus / Minus Query: 508 cttcgttggctcccttcttgagctgcttgtagttggcggcctgctggacgatgtcgaggg 567 |||||||||| |||||||||||||||||||| |||| |||||||||||||| ||||| || Sbjct: 7446242 cttcgttggcccccttcttgagctgcttgtaattggaggcctgctggacgaggtcga-gg 7446184 Query: 568 atcgttatcgtcagcttgcgcgtccgccagcgggtaggcctt 609 || || ||||||||| |||||||||||||||||||||||||| Sbjct: 7446183 atggtcatcgtcagc-tgcgcgtccgccagcgggtaggcctt 7446143 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 408 tcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgccatc 467 ||||||||||||| ||||||||||| ||||| ||||||||||||||||| || |||||| Sbjct: 7446432 tcctccgcgagcagggggaggtggagaaggatctcgagcggctccgtgtcggccgccatc 7446373 Query: 468 accacgaactccgatattcccctgttgagagtcttggtcgct 509 ||||||||||| ||||| |||||||| || ||||| |||||| Sbjct: 7446372 accacgaactctgatatacccctgttcagggtcttcgtcgct 7446331 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 271 ccttgagactctggatcggctgcttcagttggctaccctcattgctggtcactgaacaag 330 |||||||| |||| ||||| |||||| || || ||||| ||||||||||||||||||| Sbjct: 7447353 ccttgagattctgtatcggtgtcttcagctgactgccctcgttgctggtcactgaacaag 7447294 Query: 331 caatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaagggacaaaga 390 ||||||| || ||||| || ||||| || || |||||||||||||| ||||||||||| | Sbjct: 7447293 caatgacaggtctagtaacgccacatgcgcggccaagggcttgcttcgaagggacaaaaa 7447234 Query: 391 cata 394 |||| Sbjct: 7447233 cata 7447230
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 139 bits (70), Expect = 1e-29 Identities = 104/114 (91%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 161 ctagcagacaagacaccatcaccagtccaagcccctgaaaaactgtgtcacac-gaggcc 219 |||||| | |||||||||||||||||||||||| ||||||||||||||| | | |||||| Sbjct: 86116 ctagcaaataagacaccatcaccagtccaagcctctgaaaaactgtgtcgctctgaggcc 86057 Query: 220 catcacactgaaaggtcttgataaatcatatgagaagcttctcgatggcatcct 273 |||||||||||||||||||| ||||||| ||||| ||||||||||| ||||||| Sbjct: 86056 catcacactgaaaggtcttggtaaatcaaatgaggagcttctcgatagcatcct 86003 Score = 123 bits (62), Expect = 8e-25 Identities = 94/102 (92%), Gaps = 2/102 (1%) Strand = Plus / Minus Query: 508 cttcgttggctcccttcttgagctgcttgtagttggcggcctgctggacgatgtcgaggg 567 |||||||||| |||||||||||||||||||| |||| |||||||||||||| ||||| || Sbjct: 84797 cttcgttggcccccttcttgagctgcttgtaattggaggcctgctggacgaggtcga-gg 84739 Query: 568 atcgttatcgtcagcttgcgcgtccgccagcgggtaggcctt 609 || || ||||||||| |||||||||||||||||||||||||| Sbjct: 84738 atggtcatcgtcagc-tgcgcgtccgccagcgggtaggcctt 84698 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 408 tcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgccatc 467 ||||||||||||| ||||||||||| ||||| ||||||||||||||||| || |||||| Sbjct: 84987 tcctccgcgagcagggggaggtggagaaggatctcgagcggctccgtgtcggccgccatc 84928 Query: 468 accacgaactccgatattcccctgttgagagtcttggtcgct 509 ||||||||||| ||||| |||||||| || ||||| |||||| Sbjct: 84927 accacgaactctgatatacccctgttcagggtcttcgtcgct 84886 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 271 ccttgagactctggatcggctgcttcagttggctaccctcattgctggtcactgaacaag 330 |||||||| |||| ||||| |||||| || || ||||| ||||||||||||||||||| Sbjct: 85908 ccttgagattctgtatcggtgtcttcagctgactgccctcgttgctggtcactgaacaag 85849 Query: 331 caatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaagggacaaaga 390 ||||||| || ||||| || ||||| || || |||||||||||||| ||||||||||| | Sbjct: 85848 caatgacaggtctagtaacgccacatgcgcggccaagggcttgcttcgaagggacaaaaa 85789 Query: 391 cata 394 |||| Sbjct: 85788 cata 85785
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 139 bits (70), Expect = 1e-29 Identities = 104/114 (91%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 161 ctagcagacaagacaccatcaccagtccaagcccctgaaaaactgtgtcacac-gaggcc 219 |||||| | |||||||||||||||||||||||| ||||||||||||||| | | |||||| Sbjct: 7445396 ctagcaaataagacaccatcaccagtccaagcctctgaaaaactgtgtcgctctgaggcc 7445337 Query: 220 catcacactgaaaggtcttgataaatcatatgagaagcttctcgatggcatcct 273 |||||||||||||||||||| ||||||| ||||| ||||||||||| ||||||| Sbjct: 7445336 catcacactgaaaggtcttggtaaatcaaatgaggagcttctcgatagcatcct 7445283 Score = 123 bits (62), Expect = 8e-25 Identities = 94/102 (92%), Gaps = 2/102 (1%) Strand = Plus / Minus Query: 508 cttcgttggctcccttcttgagctgcttgtagttggcggcctgctggacgatgtcgaggg 567 |||||||||| |||||||||||||||||||| |||| |||||||||||||| ||||| || Sbjct: 7444077 cttcgttggcccccttcttgagctgcttgtaattggaggcctgctggacgaggtcga-gg 7444019 Query: 568 atcgttatcgtcagcttgcgcgtccgccagcgggtaggcctt 609 || || ||||||||| |||||||||||||||||||||||||| Sbjct: 7444018 atggtcatcgtcagc-tgcgcgtccgccagcgggtaggcctt 7443978 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 408 tcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgccatc 467 ||||||||||||| ||||||||||| ||||| ||||||||||||||||| || |||||| Sbjct: 7444267 tcctccgcgagcagggggaggtggagaaggatctcgagcggctccgtgtcggccgccatc 7444208 Query: 468 accacgaactccgatattcccctgttgagagtcttggtcgct 509 ||||||||||| ||||| |||||||| || ||||| |||||| Sbjct: 7444207 accacgaactctgatatacccctgttcagggtcttcgtcgct 7444166 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 271 ccttgagactctggatcggctgcttcagttggctaccctcattgctggtcactgaacaag 330 |||||||| |||| ||||| |||||| || || ||||| ||||||||||||||||||| Sbjct: 7445188 ccttgagattctgtatcggtgtcttcagctgactgccctcgttgctggtcactgaacaag 7445129 Query: 331 caatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaagggacaaaga 390 ||||||| || ||||| || ||||| || || |||||||||||||| ||||||||||| | Sbjct: 7445128 caatgacaggtctagtaacgccacatgcgcggccaagggcttgcttcgaagggacaaaaa 7445069 Query: 391 cata 394 |||| Sbjct: 7445068 cata 7445065
>gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b06, complete sequence Length = 112592 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 271 ccttgagactctggatcggctgcttcagttggctaccctcattgctggtcactgaacaag 330 ||||||||| ||| ||| | || ||||| |||||||||||||||||||||||||| |||| Sbjct: 111956 ccttgagaccctgtatctgttgtttcagctggctaccctcattgctggtcactgagcaag 112015 Query: 331 caatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaagggacaaaga 390 ||||||||||||| ||||| |||||||| || ||||| ||||| ||||| || ||||| | Sbjct: 112016 caatgaccggccttgtcaccccacaagctcggccaagagcttgttttgatggaacaaata 112075 Query: 391 catacggcacattct 405 |||| ||||| |||| Sbjct: 112076 catatggcacgttct 112090 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/96 (90%), Gaps = 3/96 (3%) Strand = Plus / Plus Query: 168 acaagacaccatcaccagtccaagcccctgaaaaactgtgtcacacgaggcccatcacac 227 |||||||||||||||||||||||||| ||||||| |||||| | |||||||||||||| Sbjct: 111693 acaagacaccatcaccagtccaagcctctgaaaat-tgtgtccct-gaggcccatcacac 111750 Query: 228 tgaaaggtctt-gataaatcatatgagaagcttctc 262 ||||||||||| | ||||||| |||||||||||||| Sbjct: 111751 tgaaaggtcttcggtaaatcagatgagaagcttctc 111786
>emb|Z49911.1|CEM28 Caenorhabditis elegans Cosmid M28, complete sequence Length = 40265 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 483 attcccctgttgagagtcttggtcgcttcgttggctcccttcttgagctgcttgtagtt 541 ||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 38927 attcctctgttgagagtcttggtggcctcgttggctcccttcttgagctgtttgtagtt 38985
>ref|NM_063899.3| Caenorhabditis elegans M28.5 (M28.5) mRNA, complete cds Length = 531 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 483 attcccctgttgagagtcttggtcgcttcgttggctcccttcttgagctgcttgtagtt 541 ||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 161 attcctctgttgagagtcttggtggcctcgttggctcccttcttgagctgtttgtagtt 103
>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0056A20, complete sequence Length = 151163 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 307 cctcattgctggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaa 366 |||||||||||||||| || || || || || ||||| ||||| ||||| ||||| || | Sbjct: 29362 cctcattgctggtcaccgagcaggcgatcacgggcctcgtcaccccacatgcacggccga 29303 Query: 367 gggcttgctttgaagggacaaagacatacggcacattct 405 | ||||||||||| ||||||||||| || |||||||||| Sbjct: 29302 gagcttgctttgatgggacaaagacgtatggcacattct 29264 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 508 cttcgttggctcccttcttgagctgcttgtagttggcggcctg 550 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 28332 cttcgttggcgcccttcttgagctgcttgtagttggcggcctg 28290 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 404 cttgtcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgc 463 ||||||||| ||||| | || |||||||| ||||| ||||| ||||| | ||| || || Sbjct: 28523 cttgtcctcggcgaggaggggaaggtggagaaggatctcgaggggctcggcgtcggccgc 28464 Query: 464 catcaccacgaactccgatattcccctgttgagagtcttggtcgct 509 ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 28463 catcaccacgaactccgcgatccctctgttgagcgtcttcgtcgct 28418
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 307 cctcattgctggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaa 366 |||||||||||||||| || || || || || ||||| ||||| ||||| ||||| || | Sbjct: 1510789 cctcattgctggtcaccgagcaggcgatcacgggcctcgtcaccccacatgcacggccga 1510730 Query: 367 gggcttgctttgaagggacaaagacatacggcacattct 405 | ||||||||||| ||||||||||| || |||||||||| Sbjct: 1510729 gagcttgctttgatgggacaaagacgtatggcacattct 1510691 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 508 cttcgttggctcccttcttgagctgcttgtagttggcggcctg 550 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1509759 cttcgttggcgcccttcttgagctgcttgtagttggcggcctg 1509717 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 404 cttgtcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgc 463 ||||||||| ||||| | || |||||||| ||||| ||||| ||||| | ||| || || Sbjct: 1509950 cttgtcctcggcgaggaggggaaggtggagaaggatctcgaggggctcggcgtcggccgc 1509891 Query: 464 catcaccacgaactccgatattcccctgttgagagtcttggtcgct 509 ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 1509890 catcaccacgaactccgcgatccctctgttgagcgtcttcgtcgct 1509845
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 307 cctcattgctggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaa 366 |||||||||||||||| || || || || || ||||| ||||| ||||| ||||| || | Sbjct: 123543 cctcattgctggtcaccgagcaggcgatcacgggcctcgtcaccccacatgcacggccga 123484 Query: 367 gggcttgctttgaagggacaaagacatacggcacattct 405 | ||||||||||| ||||||||||| || |||||||||| Sbjct: 123483 gagcttgctttgatgggacaaagacgtatggcacattct 123445 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 508 cttcgttggctcccttcttgagctgcttgtagttggcggcctg 550 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122513 cttcgttggcgcccttcttgagctgcttgtagttggcggcctg 122471 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 404 cttgtcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgc 463 ||||||||| ||||| | || |||||||| ||||| ||||| ||||| | ||| || || Sbjct: 122704 cttgtcctcggcgaggaggggaaggtggagaaggatctcgaggggctcggcgtcggccgc 122645 Query: 464 catcaccacgaactccgatattcccctgttgagagtcttggtcgct 509 ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 122644 catcaccacgaactccgcgatccctctgttgagcgtcttcgtcgct 122599
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 307 cctcattgctggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaa 366 |||||||||||||||| || || || || || ||||| ||||| ||||| ||||| || | Sbjct: 1510789 cctcattgctggtcaccgagcaggcgatcacgggcctcgtcaccccacatgcacggccga 1510730 Query: 367 gggcttgctttgaagggacaaagacatacggcacattct 405 | ||||||||||| ||||||||||| || |||||||||| Sbjct: 1510729 gagcttgctttgatgggacaaagacgtatggcacattct 1510691 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 508 cttcgttggctcccttcttgagctgcttgtagttggcggcctg 550 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1509759 cttcgttggcgcccttcttgagctgcttgtagttggcggcctg 1509717 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 404 cttgtcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgc 463 ||||||||| ||||| | || |||||||| ||||| ||||| ||||| | ||| || || Sbjct: 1509950 cttgtcctcggcgaggaggggaaggtggagaaggatctcgaggggctcggcgtcggccgc 1509891 Query: 464 catcaccacgaactccgatattcccctgttgagagtcttggtcgct 509 ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 1509890 catcaccacgaactccgcgatccctctgttgagcgtcttcgtcgct 1509845
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 307 cctcattgctggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaa 366 |||||||||||||||| || || || || || ||||| ||||| ||||| ||||| || | Sbjct: 1510786 cctcattgctggtcaccgagcaggcgatcacgggcctcgtcaccccacatgcacggccga 1510727 Query: 367 gggcttgctttgaagggacaaagacatacggcacattct 405 | ||||||||||| ||||||||||| || |||||||||| Sbjct: 1510726 gagcttgctttgatgggacaaagacgtatggcacattct 1510688 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 508 cttcgttggctcccttcttgagctgcttgtagttggcggcctg 550 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1509756 cttcgttggcgcccttcttgagctgcttgtagttggcggcctg 1509714 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 404 cttgtcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtgtcagctgc 463 ||||||||| ||||| | || |||||||| ||||| ||||| ||||| | ||| || || Sbjct: 1509947 cttgtcctcggcgaggaggggaaggtggagaaggatctcgaggggctcggcgtcggccgc 1509888 Query: 464 catcaccacgaactccgatattcccctgttgagagtcttggtcgct 509 ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 1509887 catcaccacgaactccgcgatccctctgttgagcgtcttcgtcgct 1509842
>ref|XM_531713.2| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC474484), mRNA Length = 1414 Score = 67.9 bits (34), Expect = 4e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 324 gaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaaggg 383 ||||| |||||||| ||||| | ||| ||||| || ||||| ||||| ||||| || | Sbjct: 373 gaacaggcaatgacaggcctggacaccccacaggcccgcccgagggcctgcttggagcgc 314 Query: 384 acaaagacatacggcacattcttgtcctccgcgagcaacgggaggtggaggaggatttcg 443 ||||| || || ||||| ||||| || || |||| ||| ||||| |||| |||||| Sbjct: 313 acaaacacgtagggcacgttcttatcttcacacagcagcggaaggtgcaggatgatttcc 254 Query: 444 agcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttg 503 || ||||| | ||| || |||||||| | |||||| || || || |||||||| || ||| Sbjct: 253 agaggctcagcgtctgcagccatcacgatgaactcagagatgcctctgttgagggttttg 194 Query: 504 gtcgcttcgttggctcccttcttgagctgcttgtagtt 541 || |||||||||||||| ||| |||||||||||||| Sbjct: 193 gtggcttcgttggctcctttccgaagctgcttgtagtt 156
>ref|XM_571849.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 596 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 498 gtcttggtcgcttcgttggctcccttcttgagctgcttgta 538 |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 236 gtcttggtggcttcgttggcacccttcttgagctgcttgta 196
>ref|NM_122023.2| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT5G20160 transcript variant AT5G20160.1 mRNA, complete cds Length = 719 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 321 actgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaa 380 ||||||||||| || || || |||||||| ||||| || | || | ||||||||||||| Sbjct: 404 actgaacaagcgataacaggtctagtcacaccacaggctcttcccaaggcttgctttgaa 345 Query: 381 gggacaaagacatacggcacattcttgtcctc 412 || ||||||||||| || |||||||| ||||| Sbjct: 344 ggcacaaagacataaggaacattcttatcctc 313 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 495 agagtcttggtcgcttcgttggctcccttcttgagctgcttgtagtt 541 |||||||| || ||||| || || ||||||||||||||||||||||| Sbjct: 230 agagtcttcgtagcttcattagcacccttcttgagctgcttgtagtt 184
>ref|NM_180525.1| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT5G20160 transcript variant AT5G20160.2 mRNA, complete cds Length = 815 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 321 actgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaa 380 ||||||||||| || || || |||||||| ||||| || | || | ||||||||||||| Sbjct: 500 actgaacaagcgataacaggtctagtcacaccacaggctcttcccaaggcttgctttgaa 441 Query: 381 gggacaaagacatacggcacattcttgtcctc 412 || ||||||||||| || |||||||| ||||| Sbjct: 440 ggcacaaagacataaggaacattcttatcctc 409 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 519 cccttcttgagctgcttgtagtt 541 ||||||||||||||||||||||| Sbjct: 206 cccttcttgagctgcttgtagtt 184
>gb|AY094018.1| Arabidopsis thaliana AT5g20160/F5O24_50 mRNA, complete cds Length = 387 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 321 actgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaa 380 ||||||||||| || || || |||||||| ||||| || | || | ||||||||||||| Sbjct: 311 actgaacaagcgataacaggtctagtcacaccacaggctcttcccaaggcttgctttgaa 252 Query: 381 gggacaaagacatacggcacattcttgtcctc 412 || ||||||||||| || |||||||| ||||| Sbjct: 251 ggcacaaagacataaggaacattcttatcctc 220 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 495 agagtcttggtcgcttcgttggctcccttcttgagctgcttgtagtt 541 |||||||| || ||||| || || ||||||||||||||||||||||| Sbjct: 137 agagtcttcgtagcttcattagcacccttcttgagctgcttgtagtt 91
>gb|AY048213.1| Arabidopsis thaliana AT5g20160/F5O24_50 mRNA, complete cds Length = 716 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 321 actgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaa 380 ||||||||||| || || || |||||||| ||||| || | || | ||||||||||||| Sbjct: 404 actgaacaagcgataacaggtctagtcacaccacaggctcttcccaaggcttgctttgaa 345 Query: 381 gggacaaagacatacggcacattcttgtcctc 412 || ||||||||||| || |||||||| ||||| Sbjct: 344 ggcacaaagacataaggaacattcttatcctc 313 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 495 agagtcttggtcgcttcgttggctcccttcttgagctgcttgtagtt 541 |||||||| || ||||| || || ||||||||||||||||||||||| Sbjct: 230 agagtcttcgtagcttcattagcacccttcttgagctgcttgtagtt 184
>gb|AY086996.1| Arabidopsis thaliana clone 30288 mRNA, complete sequence Length = 726 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 321 actgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaa 380 ||||||||||| || || || |||||||| ||||| || | || | ||||||||||||| Sbjct: 404 actgaacaagcgataacaggtctagtcacaccacaggctcttcccaaggcttgctttgaa 345 Query: 381 gggacaaagacatacggcacattcttgtcctc 412 || ||||||||||| || |||||||| ||||| Sbjct: 344 ggcacaaagacataaggaacattcttatcctc 313 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 495 agagtcttggtcgcttcgttggctcccttcttgagctgcttgtagtt 541 |||||||| || ||||| || || ||||||||||||||||||||||| Sbjct: 230 agagtcttcgtagcttcattagcacccttcttgagctgcttgtagtt 184
>ref|NM_200312.1| Danio rerio zgc:56066 (zgc:56066), mRNA Length = 1751 Score = 60.0 bits (30), Expect = 9e-06 Identities = 135/170 (79%) Strand = Plus / Minus Query: 384 acaaagacatacggcacattcttgtcctccgcgagcaacgggaggtggaggaggatttcg 443 ||||| |||||||| || ||||||||||| |||| ||| || || |||| ||| || Sbjct: 402 acaaacacatacgggacgttcttgtcctcgcacagcagcggcagatgcaggatgatctcc 343 Query: 444 agcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttg 503 |||||||| | ||| || |||||||| | |||||| || ||||||| ||| || || || Sbjct: 342 agcggctctgcgtcggccgccatcacgatgaactctgagattccccggttcagggtttta 283 Query: 504 gtcgcttcgttggctcccttcttgagctgcttgtagttggcggcctgctg 553 || ||||||||||| || ||| | ||||| ||||| ||||| |||||||| Sbjct: 282 gtggcttcgttggcccctttcctcagctgtttgtaattggctgcctgctg 233
>ref|XM_757414.1| Ustilago maydis 521 hypothetical protein (UM06360.1) partial mRNA Length = 381 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 491 gttgagagtcttggtcgcttcgttggctcccttcttgagctgcttgtagt 540 |||||| |||||||| || ||||| || |||||||||||||||||||||| Sbjct: 135 gttgagcgtcttggtggcctcgttagcacccttcttgagctgcttgtagt 86 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 378 gaagggacaaagacatacggcacattcttgtcctc 412 |||||||||||||| || ||||| ||||||||||| Sbjct: 248 gaagggacaaagacgtaaggcacgttcttgtcctc 214
>ref|XM_505832.1| Yarrowia lipolytica CLIB122, YALI0F24497g predicted mRNA Length = 381 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 491 gttgagagtcttggtcgcttcgttggctcccttcttgagctg 532 |||||| |||||||| || ||||||||||||||||||||||| Sbjct: 135 gttgagggtcttggtggcctcgttggctcccttcttgagctg 94
>gb|BC050495.1| Danio rerio zgc:56066, mRNA (cDNA clone MGC:56066 IMAGE:3820656), complete cds Length = 1751 Score = 60.0 bits (30), Expect = 9e-06 Identities = 135/170 (79%) Strand = Plus / Minus Query: 384 acaaagacatacggcacattcttgtcctccgcgagcaacgggaggtggaggaggatttcg 443 ||||| |||||||| || ||||||||||| |||| ||| || || |||| ||| || Sbjct: 402 acaaacacatacgggacgttcttgtcctcgcacagcagcggcagatgcaggatgatctcc 343 Query: 444 agcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttg 503 |||||||| | ||| || |||||||| | |||||| || ||||||| ||| || || || Sbjct: 342 agcggctctgcgtcggccgccatcacgatgaactctgagattccccggttcagggtttta 283 Query: 504 gtcgcttcgttggctcccttcttgagctgcttgtagttggcggcctgctg 553 || ||||||||||| || ||| | ||||| ||||| ||||| |||||||| Sbjct: 282 gtggcttcgttggcccctttcctcagctgtttgtaattggctgcctgctg 233
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 491 gttgagagtcttggtcgcttcgttggctcccttcttgagctg 532 |||||| |||||||| || ||||||||||||||||||||||| Sbjct: 3187548 gttgagggtcttggtggcctcgttggctcccttcttgagctg 3187507
>ref|XM_744631.1| Aspergillus fumigatus Af293 snRNP and snoRNP protein Snu13 (Afu2g05950) partial mRNA Length = 381 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 492 ttgagagtcttggtcgcttcgttggctcccttcttgagctg 532 |||||||||||||| || |||||||| |||||||||||||| Sbjct: 134 ttgagagtcttggtagcctcgttggcacccttcttgagctg 94
>dbj|AB226025.1| Aspergillus oryzae cDNA, contig sequence: AoEST2881 Length = 703 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 492 ttgagagtcttggtcgcttcgttggctcccttcttgagctg 532 ||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 207 ttgagtgtcttggtcgcttcgtttgctcccttcttcagctg 167
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 492 ttgagagtcttggtcgcttcgttggctcccttcttgagctg 532 ||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 1888685 ttgagtgtcttggtcgcttcgtttgctcccttcttcagctg 1888725
>gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 Length = 101458 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 321 actgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaa 380 ||||||||||| || || || |||||||| ||||| || | || | ||||||||||||| Sbjct: 8653 actgaacaagcgataacaggtctagtcacaccacaggctcttcccaaggcttgctttgaa 8712 Query: 381 gggacaaagacatacggcacattct 405 || ||||||||||| || ||||||| Sbjct: 8713 ggcacaaagacataaggaacattct 8737 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 519 cccttcttgagctgcttgtagtt 541 ||||||||||||||||||||||| Sbjct: 9273 cccttcttgagctgcttgtagtt 9295
>ref|NM_118364.1| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT4G22380 mRNA, complete cds Length = 387 Score = 56.0 bits (28), Expect = 1e-04 Identities = 175/224 (78%) Strand = Plus / Minus Query: 318 gtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgcttt 377 ||||||||||||||||| || || || || |||||||| || | || | ||||| || Sbjct: 314 gtcactgaacaagcaataacaggtcttgttactccacatgctcttcccaatgcttgtttc 255 Query: 378 gaagggacaaagacatacggcacattcttgtcctccgcgagcaacgggaggtggaggagg 437 ||||| ||||| ||||| ||||||||||| || || || ||||| || || || || || Sbjct: 254 gaaggtacaaacacatatggcacattcttatcttcggcaagcaaaggaagatgaagaaga 195 Query: 438 atttcgagcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgaga 497 || || || || || | ||||| ||||| || |||||||| || ||||| | ||| | Sbjct: 194 atctcaagtggttcagcatcagcagccataacaacgaactcagagattccacggttcaat 135 Query: 498 gtcttggtcgcttcgttggctcccttcttgagctgcttgtagtt 541 || ||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 134 gttttggtagcttcattagctcccttcttaagctgcttgtagtt 91
>gb|BT024580.1| Arabidopsis thaliana At4g22380 mRNA, complete cds Length = 387 Score = 56.0 bits (28), Expect = 1e-04 Identities = 175/224 (78%) Strand = Plus / Minus Query: 318 gtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgcttt 377 ||||||||||||||||| || || || || |||||||| || | || | ||||| || Sbjct: 314 gtcactgaacaagcaataacaggtcttgttactccacatgctcttcccaatgcttgtttc 255 Query: 378 gaagggacaaagacatacggcacattcttgtcctccgcgagcaacgggaggtggaggagg 437 ||||| ||||| ||||| ||||||||||| || || || ||||| || || || || || Sbjct: 254 gaaggtacaaacacatatggcacattcttatcttcggcaagcaaaggaagatgaagaaga 195 Query: 438 atttcgagcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgaga 497 || || || || || | ||||| ||||| || |||||||| || ||||| | ||| | Sbjct: 194 atctcaagtggttcagcatcagcagccataacaacgaactcagagattccacggttcaat 135 Query: 498 gtcttggtcgcttcgttggctcccttcttgagctgcttgtagtt 541 || ||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 134 gttttggtagcttcattagctcccttcttaagctgcttgtagtt 91
>gb|AY086674.1| Arabidopsis thaliana clone 2673 mRNA, complete sequence Length = 624 Score = 56.0 bits (28), Expect = 1e-04 Identities = 175/224 (78%) Strand = Plus / Minus Query: 318 gtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgcttt 377 ||||||||||||||||| || || || || |||||||| || | || | ||||| || Sbjct: 392 gtcactgaacaagcaataacaggtcttgttactccacatgctcttcccaatgcttgtttc 333 Query: 378 gaagggacaaagacatacggcacattcttgtcctccgcgagcaacgggaggtggaggagg 437 ||||| ||||| ||||| ||||||||||| || || || ||||| || || || || || Sbjct: 332 gaaggtacaaacacatatggcacattcttatcttcggcaagcaaaggaagatgaagaaga 273 Query: 438 atttcgagcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgaga 497 || || || || || | ||||| ||||| || |||||||| || ||||| | ||| | Sbjct: 272 atctcaagtggttcagcatcagcagccataacaacgaactcagagattccacggttcaat 213 Query: 498 gtcttggtcgcttcgttggctcccttcttgagctgcttgtagtt 541 || ||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 212 gttttggtagcttcattagctcccttcttaagctgcttgtagtt 169
>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence Length = 215980 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 84768 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 84709 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 84708 cctttccgaagctgcttgtagtt 84686
>ref|XM_509501.1| PREDICTED: Pan troglodytes similar to checkpoint with forkhead and ring finger domains (LOC452391), mRNA Length = 1923 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 447 ggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttggtc 506 ||||| ||||| || |||||||| | |||||| || || |||||||| || || ||||| Sbjct: 179 ggctcggtgtctgcagccatcacgatgaactcagagatgcccctgttaagggttttggtg 238 Query: 507 gcttcgttggctcccttcttgagctgcttgtagtt 541 || |||||||||| |||| |||||||||||||| Sbjct: 239 gcctcgttggctcttttctgaagctgcttgtagtt 273
>ref|XM_956324.1| Neurospora crassa OR74A probable 13 kD U4/U6.U5 snRNP associate protein [MIPS] (NCU01331.1) partial mRNA Length = 387 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 500 cttggtcgcttcgttggctcccttcttgagctgcttgtagttggcggcctgctggacgat 559 |||||| || |||||||| |||||||||||||| |||||| | ||||||||||||| Sbjct: 132 cttggtggcctcgttggcacccttcttgagctgtctgtagtggctggcctgctggacgca 73 Query: 560 gtcgagg 566 ||||||| Sbjct: 72 gtcgagg 66
>ref|XM_326823.1| Neurospora crassa OR74A probable 13 kD U4/U6.U5 snRNP associate protein [MIPS] (NCU01331.1) partial mRNA Length = 387 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 500 cttggtcgcttcgttggctcccttcttgagctgcttgtagttggcggcctgctggacgat 559 |||||| || |||||||| |||||||||||||| |||||| | ||||||||||||| Sbjct: 132 cttggtggcctcgttggcacccttcttgagctgtctgtagtggctggcctgctggacgca 73 Query: 560 gtcgagg 566 ||||||| Sbjct: 72 gtcgagg 66
>ref|NM_011482.3| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) (Nhp2l1), mRNA Length = 1259 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 284 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 225 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 224 cctttccgaagctgcttgtagtt 202
>ref|XM_992454.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC434401), mRNA Length = 1274 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 283 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 224 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 223 cctttccgaagctgcttgtagtt 201
>ref|XM_486217.4| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC434401), mRNA Length = 1274 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 283 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 224 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 223 cctttccgaagctgcttgtagtt 201
>gb|BC046579.1| Xenopus laevis NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:53430 IMAGE:5571836), complete cds Length = 812 Score = 54.0 bits (27), Expect = 6e-04 Identities = 168/215 (78%) Strand = Plus / Minus Query: 324 gaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaaggg 383 ||||||| ||| || ||||||| ||||||||||| | ||||| || ||||| ||| | Sbjct: 393 gaacaagaaatcactggcctagagactccacaagctcttccaagtgcctgcttggaacgc 334 Query: 384 acaaagacatacggcacattcttgtcctccgcgagcaacgggaggtggaggaggatttcg 443 ||||| ||||| || || ||||||||||| || | ||||||||| || | ||| || Sbjct: 333 acaaacacataggggacgttcttgtcctcacataggagcgggaggtgtagaatgatctcc 274 Query: 444 agcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttg 503 || || || | ||||||||||| || | |||||| ||||| || ||||| || ||||| Sbjct: 273 agaggttctgcatcagctgccatgactatgaactcagatatgcctctgtttagggtcttt 214 Query: 504 gtcgcttcgttggctcccttcttgagctgcttgta 538 || ||||||||||| ||||| |||||||||||| Sbjct: 213 gtagcttcgttggcacccttgcggagctgcttgta 179
>gb|BC083315.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:101925 IMAGE:5714819), complete cds Length = 1201 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 204 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 145 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 144 cctttccgaagctgcttgtagtt 122
>gb|BC054450.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:62619 IMAGE:6491298), complete cds Length = 1218 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 228 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 169 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 168 cctttccgaagctgcttgtagtt 146
>gb|BC026755.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:25294 IMAGE:3154066), complete cds Length = 1226 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 228 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 169 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 168 cctttccgaagctgcttgtagtt 146
>gb|BC058493.1| Rattus norvegicus similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27), mRNA (cDNA clone MGC:72932 IMAGE:6887059), complete cds Length = 635 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 287 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 228 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 227 cctttccgaagctgcttgtagtt 205
>emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cosmid contig 12F11 Length = 74317 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 500 cttggtcgcttcgttggctcccttcttgagctgcttgtagttggcggcctgctggacgat 559 |||||| || |||||||| |||||||||||||| |||||| | ||||||||||||| Sbjct: 35066 cttggtggcctcgttggcacccttcttgagctgtctgtagtggctggcctgctggacgca 35125 Query: 560 gtcgagg 566 ||||||| Sbjct: 35126 gtcgagg 35132
>dbj|AK134943.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430523H23 product:sperm specific antigen 1, full insert sequence Length = 1763 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 220 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 161 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 160 cctttccgaagctgcttgtagtt 138
>dbj|AK145391.1| Mus musculus morula whole body morula cDNA, RIKEN full-length enriched library, clone:I0C0032L12 product:sperm specific antigen 1, full insert sequence Length = 1259 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 284 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 225 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 224 cctttccgaagctgcttgtagtt 202
>dbj|AK145608.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0021G14 product:sperm specific antigen 1, full insert sequence Length = 1244 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 264 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 205 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 204 cctttccgaagctgcttgtagtt 182
>dbj|AK168930.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920065L05 product:sperm specific antigen 1, full insert sequence Length = 1210 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 235 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 176 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 175 cctttccgaagctgcttgtagtt 153
>dbj|AK168808.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920056H18 product:NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27) homolog [Homo sapiens], full insert sequence Length = 836 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 252 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 193 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 192 cctttccgaagctgcttgtagtt 170
>dbj|AK169103.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920080B21 product:sperm specific antigen 1, full insert sequence Length = 1247 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 266 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 207 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 206 cctttccgaagctgcttgtagtt 184
>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228481 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || ||||||||||| ||| | ||||| ||||| Sbjct: 83437 gctgccatcacaatgaactcagagatgcctctgttgagagttttgctggcttcactggct 83378 Query: 519 cccttcttgagctgcttgtagtt 541 || |||| |||||||||||||| Sbjct: 83377 cctttctgaagctgcttgtagtt 83355
>gb|AC156559.3| Mus musculus BAC clone RP24-421K17 from chromosome 13, complete sequence Length = 151183 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 |||||| |||| | |||||| || || || ||||||||||| ||||| ||||| |||||| Sbjct: 65709 gctgccttcacaatgaactcagagatgcctctgttgagagttttggtggcttcattggct 65768 Query: 519 cccttcttgagctgcttgtagtt 541 || |||| |||| ||||||||| Sbjct: 65769 cctttctgaagcttcttgtagtt 65791
>dbj|AK004489.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1190005A22 product:sperm specific antigen 1, full insert sequence Length = 1210 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 230 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 171 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 170 cctttccgaagctgcttgtagtt 148
>gb|AC127070.10| Homo sapiens 12 BAC RP11-46H11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181012 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 447 ggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttggtc 506 ||||| ||||| || |||||||| | |||||| || || |||||||| || || ||||| Sbjct: 49648 ggctcggtgtctgcagccatcacgatgaactcagagatgcccctgttaagggttttggtg 49707 Query: 507 gcttcgttggctcccttcttgagctgcttgtagtt 541 || |||||||||| |||| |||||||||||||| Sbjct: 49708 gcctcgttggctcttttctgaagctgcttgtagtt 49742
>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete sequence Length = 228508 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 209844 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 209785 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 209784 cctttccgaagctgcttgtagtt 209762
>ref|NM_212515.1| Rattus norvegicus similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27) (MGC72932), mRNA Length = 635 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 287 gctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggct 228 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 227 cctttccgaagctgcttgtagtt 205
>gb|BC061279.1| Xenopus tropicalis hypothetical protein MGC75724, mRNA (cDNA clone MGC:75724 IMAGE:5380980), complete cds Length = 848 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 316 tggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgct 375 |||| |||| ||||||||| || ||||||| ||||||||||| | ||||| ||||||| Sbjct: 421 tggtgactgcacaagcaatcactggcctagagactccacaagctcttccaagtgcttgct 362 Query: 376 ttgaagggacaaagacatacggcacattcttgtc 409 | || | ||||| ||||| || ||||||||||| Sbjct: 361 tggagcgcacaaacacataggggacattcttgtc 328
>gb|BC066453.1| Danio rerio zgc:56066, mRNA (cDNA clone MGC:77417 IMAGE:6970302), complete cds Length = 1786 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 444 agcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttg 503 |||||||| | ||| || |||||||| | |||||| || ||||||| ||| || || || Sbjct: 334 agcggctctgcgtcggccgccatcacgatgaactctgagattccccggttcagggtttta 275 Query: 504 gtcgcttcgttggctcccttcttgagctgcttgtagttggcggcctgctg 553 || ||||||||||| || ||| | ||||| ||||| ||||| |||||||| Sbjct: 274 gtggcttcgttggcccctttcctcagctgtttgtaattggctgcctgctg 225
>ref|XM_365765.1| Magnaporthe grisea 70-15 hypothetical protein (MG02467.4) partial mRNA Length = 381 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 495 agagtcttggtcgcttcgttggctcccttcttgagctg 532 ||||||||||| || ||||||||||||||||| ||||| Sbjct: 131 agagtcttggtagcctcgttggctcccttcttcagctg 94
>ref|XM_860169.1| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1), transcript variant 2 (LOC609886), mRNA Length = 1394 Score = 52.0 bits (26), Expect = 0.002 Identities = 170/218 (77%) Strand = Plus / Minus Query: 324 gaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaaggg 383 ||||| |||||||| ||||| | ||| ||||| || ||||| ||||| ||||| || | Sbjct: 350 gaacaggcaatgacaggcctggacaccccacaggcccgcccgagggcctgcttggagcgc 291 Query: 384 acaaagacatacggcacattcttgtcctccgcgagcaacgggaggtggaggaggatttcg 443 ||||| || || ||||| ||||| || || |||| ||| ||||| |||| |||||| Sbjct: 290 acaaacacgtagggcacgttcttatcttcacacagcagcggaaggtgcaggatgatttcc 231 Query: 444 agcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttg 503 || |||| | ||| || |||||||| | |||||| || || || |||||||| || || Sbjct: 230 agaggcttagcgtctgcagccatcacgatgaactcagagatgcctctgttgagggtttta 171 Query: 504 gtcgcttcgttggctcccttcttgagctgcttgtagtt 541 || |||||||||||||| ||| |||||||||||||| Sbjct: 170 gtggcttcgttggctcctttccgaagctgcttgtagtt 133
>ref|XM_847115.1| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1), transcript variant 1 (LOC609886), mRNA Length = 735 Score = 52.0 bits (26), Expect = 0.002 Identities = 170/218 (77%) Strand = Plus / Minus Query: 324 gaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaaggg 383 ||||| |||||||| ||||| | ||| ||||| || ||||| ||||| ||||| || | Sbjct: 322 gaacaggcaatgacaggcctggacaccccacaggcccgcccgagggcctgcttggagcgc 263 Query: 384 acaaagacatacggcacattcttgtcctccgcgagcaacgggaggtggaggaggatttcg 443 ||||| || || ||||| ||||| || || |||| ||| ||||| |||| |||||| Sbjct: 262 acaaacacgtagggcacgttcttatcttcacacagcagcggaaggtgcaggatgatttcc 203 Query: 444 agcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttg 503 || |||| | ||| || |||||||| | |||||| || || || |||||||| || || Sbjct: 202 agaggcttagcgtctgcagccatcacgatgaactcagagatgcctctgttgagggtttta 143 Query: 504 gtcgcttcgttggctcccttcttgagctgcttgtagtt 541 || |||||||||||||| ||| |||||||||||||| Sbjct: 142 gtggcttcgttggctcctttccgaagctgcttgtagtt 105
>ref|XR_004088.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC636276), mRNA Length = 1155 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 460 ctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctc 519 |||||||||| | |||||| || || || |||||||| || ||||| ||||| ||||||| Sbjct: 172 ctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggctc 113 Query: 520 ccttcttgagctgcttgtagtt 541 | ||| |||||||||||||| Sbjct: 112 ctttccgaagctgcttgtagtt 91
>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57 Length = 199577 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 456 tcagctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttg 515 ||||| ||||| || |||||||| || ||||| | ||| | || ||||| ||||| || Sbjct: 49454 tcagcagccataacaacgaactcagagattccacggttcaatgttttggtagcttcatta 49513 Query: 516 gctcccttcttgagctgcttgtagtt 541 ||||||||||| |||||||||||||| Sbjct: 49514 gctcccttcttaagctgcttgtagtt 49539 Score = 40.1 bits (20), Expect = 8.7 Identities = 71/88 (80%) Strand = Plus / Plus Query: 318 gtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgcttt 377 ||||||||||||||||| || || || || |||||||| || | || | ||||| || Sbjct: 48821 gtcactgaacaagcaataacaggtcttgttactccacatgctcttcccaatgcttgtttc 48880 Query: 378 gaagggacaaagacatacggcacattct 405 ||||| ||||| ||||| |||||||||| Sbjct: 48881 gaaggtacaaacacatatggcacattct 48908
>emb|AL033545.2|ATF7K2 Arabidopsis thaliana DNA chromosome 4, BAC clone F7K2 (ESSA project) Length = 106702 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 456 tcagctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttg 515 ||||| ||||| || |||||||| || ||||| | ||| | || ||||| ||||| || Sbjct: 646 tcagcagccataacaacgaactcagagattccacggttcaatgttttggtagcttcatta 705 Query: 516 gctcccttcttgagctgcttgtagtt 541 ||||||||||| |||||||||||||| Sbjct: 706 gctcccttcttaagctgcttgtagtt 731 Score = 40.1 bits (20), Expect = 8.7 Identities = 71/88 (80%) Strand = Plus / Plus Query: 318 gtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgcttt 377 ||||||||||||||||| || || || || |||||||| || | || | ||||| || Sbjct: 13 gtcactgaacaagcaataacaggtcttgttactccacatgctcttcccaatgcttgtttc 72 Query: 378 gaagggacaaagacatacggcacattct 405 ||||| ||||| ||||| |||||||||| Sbjct: 73 gaaggtacaaacacatatggcacattct 100
>ref|XM_697178.1| PREDICTED: Danio rerio hypothetical protein LOC554671 (LOC554671), mRNA Length = 1702 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 444 agcggctccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttg 503 |||||||| | ||| || |||||||| | |||||| || ||||||| ||| || || || Sbjct: 332 agcggctctgcgtcggccgccatcacgatgaactctgagattccccggttcagggtttta 273 Query: 504 gtcgcttcgttggctcccttcttgagctgcttgtagttggcggcctgctg 553 || ||||||||||| || ||| | ||||| ||||| ||||| |||||||| Sbjct: 272 gtggcttcgttggcccctttcctcagctgtttgtaattggctgcctgctg 223
>ref|NM_203663.1| Xenopus tropicalis hypothetical protein MGC75724 (MGC75724), mRNA Length = 848 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 316 tggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgct 375 |||| |||| ||||||||| || ||||||| ||||||||||| | ||||| ||||||| Sbjct: 421 tggtgactgcacaagcaatcactggcctagagactccacaagctcttccaagtgcttgct 362 Query: 376 ttgaagggacaaagacatacggcacattcttgtc 409 | || | ||||| ||||| || ||||||||||| Sbjct: 361 tggagcgcacaaacacataggggacattcttgtc 328
>emb|CR760372.2| Xenopus tropicalis finished cDNA, clone TNeu005n20 Length = 789 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 316 tggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgct 375 |||| |||| ||||||||| || ||||||| ||||||||||| | ||||| ||||||| Sbjct: 377 tggtgactgcacaagcaatcactggcctagagactccacaagctcttccaagtgcttgct 318 Query: 376 ttgaagggacaaagacatacggcacattcttgtc 409 | || | ||||| ||||| || ||||||||||| Sbjct: 317 tggagcgcacaaacacataggggacattcttgtc 284
>emb|CR761482.2| Xenopus tropicalis finished cDNA, clone TGas123b15 Length = 808 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 316 tggtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgct 375 |||| |||| ||||||||| || ||||||| ||||||||||| | ||||| ||||||| Sbjct: 377 tggtgactgcacaagcaatcactggcctagagactccacaagctcttccaagtgcttgct 318 Query: 376 ttgaagggacaaagacatacggcacattcttgtc 409 | || | ||||| ||||| || ||||||||||| Sbjct: 317 tggagcgcacaaacacataggggacattcttgtc 284
>emb|AL929165.9| Mouse DNA sequence from clone RP23-446D4 on chromosome 2, complete sequence Length = 181326 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 460 ctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctc 519 |||||||||| | |||||| || || || |||||||| || ||||| ||||| ||||||| Sbjct: 39855 ctgccatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggctc 39914 Query: 520 ccttcttgagctgcttgtagtt 541 | ||| |||||||||||||| Sbjct: 39915 ctttccgaagctgcttgtagtt 39936
>ref|NM_117330.2| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT4G12600 mRNA, complete cds Length = 754 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 ccaagggcttgctttgaagggacaaagacatacggcacattctt 406 ||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 363 ccaagggcttgtttcgatggcacaaacacatacggcacattctt 320
>gb|AF361618.1| Arabidopsis thaliana AT4g12600/T1P17_190 mRNA, complete cds Length = 679 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 ccaagggcttgctttgaagggacaaagacatacggcacattctt 406 ||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 339 ccaagggcttgtttcgatggcacaaacacatacggcacattctt 296
>gb|AY055095.1| Arabidopsis thaliana AT4g12600/T1P17_190 mRNA, complete cds Length = 387 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 ccaagggcttgctttgaagggacaaagacatacggcacattctt 406 ||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 269 ccaagggcttgtttcgatggcacaaacacatacggcacattctt 226
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 495 agagtcttggtcgcttcgttggctcccttctt 526 |||||||||||||| |||||||| |||||||| Sbjct: 497967 agagtcttggtcgcctcgttggcacccttctt 497936
>gb|AY087261.1| Arabidopsis thaliana clone 33381 mRNA, complete sequence Length = 715 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 ccaagggcttgctttgaagggacaaagacatacggcacattctt 406 ||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 363 ccaagggcttgtttcgatggcacaaacacatacggcacattctt 320
>ref|NM_210145.1| Eremothecium gossypii AEL070Wp (AEL070W), mRNA Length = 384 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 495 agagtcttggtcgcttcgttggctcccttctt 526 |||||||||||||| |||||||| |||||||| Sbjct: 134 agagtcttggtcgcctcgttggcacccttctt 103
>ref|XM_924350.2| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1, transcript variant 2 (LOC637555), mRNA Length = 1274 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | ||||| || || || |||||||| || ||||| ||||| |||||| Sbjct: 282 gctgccatcacaattaactcagagatgcctctgttgagggttttggtggcttcattggct 223 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 222 cctttccgaagctgcttgtagtt 200
>ref|XR_004053.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC672066), mRNA Length = 836 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||| | || ||||| ||||| |||||| Sbjct: 173 gctgccatcacaatgaactcagagatgcctctgttgggggttttggtggcttcattggct 114 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 113 cctttccgaagctgcttgtagtt 91
>ref|XM_001003565.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC667539), mRNA Length = 897 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||| | || ||||| ||||| |||||| Sbjct: 173 gctgccatcacaatgaactcagagatgcctctgttgggggttttggtggcttcattggct 114 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 113 cctttccgaagctgcttgtagtt 91
>ref|XM_910204.2| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC633304), mRNA Length = 897 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||| | || ||||| ||||| |||||| Sbjct: 173 gctgccatcacaatgaactcagagatgcctctgttgggggttttggtggcttcattggct 114 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 113 cctttccgaagctgcttgtagtt 91
>ref|XM_799370.1| Trypanosoma cruzi strain CL Brener ribosomal protein S6 (Tc00.1047053509943.30) partial mRNA Length = 381 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 378 gaagggacaaagacatacggcacattcttgtcctc 412 ||||| ||||| ||||||||||| ||||||||||| Sbjct: 251 gaaggcacaaaaacatacggcacgttcttgtcctc 217
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||| | || ||||| ||||| |||||| Sbjct: 64064 gctgccatcacaatgaactcagagatgcctctgttgggggttttggtggcttcattggct 64005 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 64004 cctttccgaagctgcttgtagtt 63982
>ref|XM_815179.1| Trypanosoma cruzi strain CL Brener ribosomal protein S6 (Tc00.1047053508277.120) partial mRNA Length = 381 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 378 gaagggacaaagacatacggcacattcttgtcctc 412 ||||| ||||| ||||||||||| ||||||||||| Sbjct: 251 gaaggcacaaaaacatacggcacgttcttgtcctc 217
>ref|XM_970157.1| PREDICTED: Tribolium castaneum similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC664143), mRNA Length = 405 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 327 caagcaatgaccggcctagtcactccacaagcacgcccaagggcttgctttgaagggaca 386 ||||||||||||| ||| | || |||||||| ||||| || || || || || |||| Sbjct: 323 caagcaatgaccgaccttgagacgccacaagcgcgccccagtgcctgtttcgagcggacg 264 Query: 387 aagacatacggcacattcttgtc 409 || |||||||||||||||||||| Sbjct: 263 aaaacatacggcacattcttgtc 241
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34 Length = 196107 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 363 ccaagggcttgctttgaagggacaaagacatacggcacattct 405 ||||||||||| || || || ||||| |||||||||||||||| Sbjct: 126217 ccaagggcttgtttcgatggcacaaacacatacggcacattct 126175
>emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BAC clone T1P17 (ESSA project) Length = 137519 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 363 ccaagggcttgctttgaagggacaaagacatacggcacattct 405 ||||||||||| || || || ||||| |||||||||||||||| Sbjct: 121685 ccaagggcttgtttcgatggcacaaacacatacggcacattct 121643
>ref|XM_345321.2| PREDICTED: Rattus norvegicus similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC365987), mRNA Length = 543 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || | || |||||||| || ||||| ||||| |||||| Sbjct: 380 gctgccatcacaatgaactcagagacacctctgttgagggttttggtggcttcattggct 321 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 320 cctttccgaagctgcttgtagtt 298
>emb|BX284624.4| Mouse DNA sequence from clone RP23-299A2 on chromosome 2, complete sequence Length = 209836 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 459 gctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggct 518 ||||||||||| | |||||| || || || |||||| | || ||||| ||||| |||||| Sbjct: 188827 gctgccatcacaatgaactcagagatgcctctgttgggggttttggtggcttcattggct 188886 Query: 519 cccttcttgagctgcttgtagtt 541 || ||| |||||||||||||| Sbjct: 188887 cctttccgaagctgcttgtagtt 188909
>ref|XM_515161.1| PREDICTED: Pan troglodytes similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC458869), mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.56 Identities = 115/146 (78%) Strand = Plus / Minus Query: 396 ggcacattcttgtcctccgcgagcaacgggaggtggaggaggatttcgagcggctccgtg 455 |||||||||||||| || |||| ||||||||| || | ||| || || ||||| | | Sbjct: 629 ggcacattcttgtcttcacacagcagcgggaggtgcagaatgatctccagtggctcggcg 570 Query: 456 tcagctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttg 515 || || |||||||| | |||||| || || ||||||||||| || ||||| || || ||| Sbjct: 569 tctgcagccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattg 510 Query: 516 gctcccttcttgagctgcttgtagtt 541 ||||| ||| |||||||| ||||| Sbjct: 509 gctcctttccgaagctgcttatagtt 484
>gb|DQ214255.1| Taeniopygia guttata clone 0061P0016A06 NHP2 non-histone chromosome protein 2-like 1-like mRNA, complete sequence Length = 1118 Score = 44.1 bits (22), Expect = 0.56 Identities = 124/158 (78%) Strand = Plus / Minus Query: 366 agggcttgctttgaagggacaaagacatacggcacattcttgtcctccgcgagcaacggg 425 ||||||||||| || | ||||| ||||| || || ||||||||||| ||| | ||| Sbjct: 296 agggcttgcttggagcgcacaaacacatagggtacgttcttgtcctcgcagagaagaggg 237 Query: 426 aggtggaggaggatttcgagcggctccgtgtcagctgccatcaccacgaactccgatatt 485 ||||| |||| ||| || | ||||||| || ||||||||||| | |||||| | ||| Sbjct: 236 aggtgcaggatgatctccaagggctccgcatctgctgccatcacaatgaactctgctatc 177 Query: 486 cccctgttgagagtcttggtcgcttcgttggctccctt 523 || ||||| || || ||||| ||||| ||||||||||| Sbjct: 176 cctctgttcagtgttttggtggcttcattggctccctt 139
>ref|XM_001005500.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC626361), mRNA Length = 1229 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Minus Query: 460 ctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctc 519 |||| ||||| | |||||| || || || |||||||| || ||||| ||||| ||||||| Sbjct: 237 ctgctatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggctc 178 Query: 520 ccttcttgagctgcttgtagtt 541 | ||| |||||||||||||| Sbjct: 177 ctttccgaagctgcttgtagtt 156
>ref|XM_904370.2| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC630757), mRNA Length = 1228 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Minus Query: 460 ctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctc 519 |||| ||||| | |||||| || || || |||||||| || ||||| ||||| ||||||| Sbjct: 237 ctgctatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggctc 178 Query: 520 ccttcttgagctgcttgtagtt 541 | ||| |||||||||||||| Sbjct: 177 ctttccgaagctgcttgtagtt 156
>ref|XM_973339.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC630757), mRNA Length = 1228 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Minus Query: 460 ctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctc 519 |||| ||||| | |||||| || || || |||||||| || ||||| ||||| ||||||| Sbjct: 237 ctgctatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggctc 178 Query: 520 ccttcttgagctgcttgtagtt 541 | ||| |||||||||||||| Sbjct: 177 ctttccgaagctgcttgtagtt 156
>gb|AC124909.3| Equus caballus clone CH241-91H15, complete sequence Length = 171421 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 cataacagtcttgcaaaatata 141 |||||||||||||||||||||| Sbjct: 32531 cataacagtcttgcaaaatata 32552
>ref|XM_317299.2| Anopheles gambiae str. PEST ENSANGP00000010500 (ENSANGG00000008011), partial mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.56 Identities = 79/98 (80%) Strand = Plus / Minus Query: 384 acaaagacatacggcacattcttgtcctccgcgagcaacgggaggtggaggaggatttcg 443 ||||| || |||||||||||||||||||| |||| ||| || || || | ||||||| Sbjct: 245 acaaacacgtacggcacattcttgtcctcgcacagcagcggaagatgcagaatgatttcg 186 Query: 444 agcggctccgtgtcagctgccatcaccacgaactccga 481 | |||||||| || || |||||||| | ||||||||| Sbjct: 185 atcggctccgcatccgccgccatcacgatgaactccga 148 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 agctgcttgtagttggcggcctgctgga 555 ||||||||||||||| | |||||||||| Sbjct: 101 agctgcttgtagttgaccgcctgctgga 74
>emb|CR556713.11| Zebrafish DNA sequence from clone DKEY-28O14 in linkage group 11, complete sequence Length = 229692 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 195 ctgaaaaactgtgtcacacgag 216 |||||||||||||||||||||| Sbjct: 101736 ctgaaaaactgtgtcacacgag 101757
>emb|CT030166.8| Mouse DNA sequence from clone RP23-320I11 on chromosome 13, complete sequence Length = 222942 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Minus Query: 460 ctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctc 519 |||| ||||| | |||||| || || || |||||||| || ||||| ||||| ||||||| Sbjct: 176812 ctgctatcacaatgaactcagagatgcctctgttgagggttttggtggcttcattggctc 176753 Query: 520 ccttcttgagctgcttgtagtt 541 | ||| |||||||||||||| Sbjct: 176752 ctttccgaagctgcttgtagtt 176731
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 cataacagtcttgcaaaatata 141 |||||||||||||||||||||| Sbjct: 1045999 cataacagtcttgcaaaatata 1046020
>ref|XM_416225.1| PREDICTED: Gallus gallus similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC417986), mRNA Length = 782 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| | |||||| | ||| || || ||||| |||||||||||||| Sbjct: 233 gccatcacgatgaactctgctattcctcggttcagtgttttggtggcttcgttggctcct 174 Query: 522 ttcttgagctgcttgtagttg 542 || ||||||||||||||| Sbjct: 173 ttgcgtagctgcttgtagttg 153
>ref|XM_976843.1| PREDICTED: Mus musculus hypothetical LOC544888 (LOC544888), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 tgtcagctgccatcaccacga 474 ||||||||||||||||||||| Sbjct: 191 tgtcagctgccatcaccacga 171
>ref|XM_909635.2| PREDICTED: Mus musculus hypothetical LOC544888 (LOC544888), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 tgtcagctgccatcaccacga 474 ||||||||||||||||||||| Sbjct: 191 tgtcagctgccatcaccacga 171
>ref|XM_619025.3| PREDICTED: Mus musculus hypothetical LOC544888 (LOC544888), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 tgtcagctgccatcaccacga 474 ||||||||||||||||||||| Sbjct: 191 tgtcagctgccatcaccacga 171
>gb|DQ014842.1| Uncultured bacterium clone M1_d03_3 16S ribosomal RNA gene, partial sequence Length = 1341 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 ggcggcctgctggacgatgtc 562 ||||||||||||||||||||| Sbjct: 693 ggcggcctgctggacgatgtc 713
>emb|AL135751.1|SPAC607 S.pombe chromosome I cosmid c607 Length = 19559 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 384 acaaagacatacggcacattcttgtcctc 412 ||||| ||||| ||||||||||||||||| Sbjct: 3083 acaaaaacataaggcacattcttgtcctc 3111
>emb|BX950527.2| Gallus gallus finished cDNA, clone ChEST568g13 Length = 801 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| | |||||| | ||| || || ||||| |||||||||||||| Sbjct: 252 gccatcacgatgaactctgctattcctcggttcagtgttttggtggcttcgttggctcct 193 Query: 522 ttcttgagctgcttgtagttg 542 || ||||||||||||||| Sbjct: 192 ttgcgtagctgcttgtagttg 172
>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence Length = 202807 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 tgtcagctgccatcaccacga 474 ||||||||||||||||||||| Sbjct: 126668 tgtcagctgccatcaccacga 126648
>ref|NM_001019023.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC607.03c), partial mRNA Length = 378 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 384 acaaagacatacggcacattcttgtcctc 412 ||||| ||||| ||||||||||||||||| Sbjct: 239 acaaaaacataaggcacattcttgtcctc 211
>emb|BX934076.2| Gallus gallus finished cDNA, clone ChEST55d24 Length = 1170 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| | |||||| | ||| || || ||||| |||||||||||||| Sbjct: 267 gccatcacgatgaactctgctattcctcggttcagtgttttggtggcttcgttggctcct 208 Query: 522 ttcttgagctgcttgtagttg 542 || ||||||||||||||| Sbjct: 207 ttgcgtagctgcttgtagttg 187
>emb|BX932329.2| Gallus gallus finished cDNA, clone ChEST359i7 Length = 818 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| | |||||| | ||| || || ||||| |||||||||||||| Sbjct: 341 gccatcacgatgaactctgctattcctcggttcagtgttttggtggcttcgttggctcct 282 Query: 522 ttcttgagctgcttgtagttg 542 || ||||||||||||||| Sbjct: 281 ttgcgtagctgcttgtagttg 261
>emb|BX931143.2| Gallus gallus finished cDNA, clone ChEST203b22 Length = 723 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| | |||||| | ||| || || ||||| |||||||||||||| Sbjct: 246 gccatcacgatgaactctgctattcctcggttcagtgttttggtggcttcgttggctcct 187 Query: 522 ttcttgagctgcttgtagttg 542 || ||||||||||||||| Sbjct: 186 ttgcgtagctgcttgtagttg 166
>emb|CR352576.1| Gallus gallus finished cDNA, clone ChEST831m24 Length = 727 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| | |||||| | ||| || || ||||| |||||||||||||| Sbjct: 250 gccatcacgatgaactctgctattcctcggttcagtgttttggtggcttcgttggctcct 191 Query: 522 ttcttgagctgcttgtagttg 542 || ||||||||||||||| Sbjct: 190 ttgcgtagctgcttgtagttg 170
>gb|AY950656.1| Acanthamoeba castellanii snu13p-like mRNA, complete cds Length = 619 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 528 agctgcttgtagttggcggcctgctggac 556 |||||||||||||||| ||||||||||| Sbjct: 227 agctgcttgtagttggtcgcctgctggac 199
>emb|BX936171.1| Gallus gallus finished cDNA, clone ChEST145m8 Length = 1144 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| | |||||| | ||| || || ||||| |||||||||||||| Sbjct: 241 gccatcacgatgaactctgctattcctcggttcagtgttttggtggcttcgttggctcct 182 Query: 522 ttcttgagctgcttgtagttg 542 || ||||||||||||||| Sbjct: 181 ttgcgtagctgcttgtagttg 161
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ttggcggcctgctggacgatgtcga 564 ||||||||||||||| ||||||||| Sbjct: 1971230 ttggcggcctgctgggcgatgtcga 1971206
>gb|AF087136.1|AF087136 Schizosaccharomyces pombe SNU13 snRNP subunit homolog (snu13) gene, complete cds Length = 725 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 384 acaaagacatacggcacattcttgtcctc 412 ||||| ||||| ||||||||||||||||| Sbjct: 442 acaaaaacataaggcacattcttgtcctc 414
>gb|U95114.1|MMU95114 Mus musculus fertilization antigen-1 mRNA, complete cds Length = 642 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 489 ctgttgagagtcttggtcgcttcgttggctcccttcttgagctgcttgtagtt 541 |||||||| || ||||| ||||| |||||||| ||| |||||||||||||| Sbjct: 224 ctgttgagggttttggtggcttcattggctcctttccgaagctgcttgtagtt 172
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 cccttcttgagctgcttgta 538 |||||||||||||||||||| Sbjct: 435028 cccttcttgagctgcttgta 435047
>gb|AE013216.1| Thermoanaerobacter tengcongensis MB4, section 243 of 244 of the complete genome Length = 10099 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 aagatggcagacataatggcagca 111 ||||||||||||||||| |||||| Sbjct: 588 aagatggcagacataattgcagca 611
>ref|XM_389646.1| Gibberella zeae PH-1 chromosome 4 predicted protein (FG09470.1) partial mRNA Length = 1089 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 gcttctcgatggcatccttgagac 279 |||||| ||||||||||||||||| Sbjct: 34 gcttcttgatggcatccttgagac 11
>gb|AC147031.2| Pan troglodytes BAC clone RP43-98M7 from 7, complete sequence Length = 175794 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ggagaaaattcaactgccat 49 |||||||||||||||||||| Sbjct: 138572 ggagaaaattcaactgccat 138553
>ref|XM_848546.1| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC610953), mRNA Length = 397 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 489 ctgttgagagtcttggtcgcttcgttggctcc 520 |||||||| || ||||| |||||||||||||| Sbjct: 152 ctgttgagggttttggtggcttcgttggctcc 121
>gb|AC004911.1| Homo sapiens PAC clone RP5-870F17 from 7, complete sequence Length = 155382 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atggcagcatgatttaacat 122 |||||||||||||||||||| Sbjct: 151798 atggcagcatgatttaacat 151779
>emb|AL353661.41| Human DNA sequence from clone RP3-445O1 on chromosome 6, complete sequence Length = 61334 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ttctcgatggcatccttgag 277 |||||||||||||||||||| Sbjct: 15632 ttctcgatggcatccttgag 15613
>emb|AL031847.17|HS120G22 Human DNA sequence from clone RP1-120G22 on chromosome 1p36.21-36.33 Contains the 5' end of the CHD5 gene for chromodomain helicase DNA binding protein 5, the RPL22 gene for ribosomal protein L22, eight novel genes, the ICMT gene for isoprenylcysteine carboxyl methyltransferase, possible ortholog of rodent transcription factor HES-3, the 3' end of the gene for brain acyl-CoA hydrolase (BACH) and seven CpG islands, complete sequence Length = 166518 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 594 ccagcgggtaggcctttggg 613 |||||||||||||||||||| Sbjct: 28969 ccagcgggtaggcctttggg 28988
>emb|CR541725.1| Homo sapiens full open reading frame cDNA clone RZPDo834A1029D for gene NHP2L1, NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae); complete cds, incl. stopcodon Length = 387 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 170 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 111 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 110 ttccgaagctgcttatagtt 91
>gb|AY991238.1| Uncultured bacterium clone C13_O06 16S ribosomal RNA gene, partial sequence Length = 1283 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gttggcggcctgctggacga 558 |||||||||||||||||||| Sbjct: 654 gttggcggcctgctggacga 673
>emb|AL021712.2|ATT10I14 Arabidopsis thaliana DNA chromosome 4, BAC clone T10I14 (ESSA project) Length = 82891 Score = 40.1 bits (20), Expect = 8.7 Identities = 71/88 (80%) Strand = Plus / Plus Query: 318 gtcactgaacaagcaatgaccggcctagtcactccacaagcacgcccaagggcttgcttt 377 ||||||||||||||||| || || || || |||||||| || | || | ||||| || Sbjct: 82726 gtcactgaacaagcaataacaggtcttgttactccacatgctcttcccaatgcttgtttc 82785 Query: 378 gaagggacaaagacatacggcacattct 405 ||||| ||||| ||||| |||||||||| Sbjct: 82786 gaaggtacaaacacatatggcacattct 82813
>emb|AJ292371.1|EMU292371 Echinococcus multilocularis mRNA for putative high mobility group-like nuclear protein 2 (hmg2 gene) Length = 483 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 495 agagtcttggtcgcttcgttggctcccttcttgagctgcttgta 538 |||| |||||| || || ||||| ||||| |||||||||||||| Sbjct: 167 agagccttggtagcctcattggcaccctttttgagctgcttgta 124
>gb|BC095439.1| Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), transcript variant 1, mRNA (cDNA clone MGC:111142 IMAGE:30719732), complete cds Length = 1499 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 252 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 193 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 192 ttccgaagctgcttatagtt 173
>gb|AC069079.11| Homo sapiens chromosome 10 clone RP11-539E19, complete sequence Length = 216006 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tatagctgaaaaacataaaa 157 |||||||||||||||||||| Sbjct: 154314 tatagctgaaaaacataaaa 154333
>gb|AC099063.2| Homo sapiens chromosome 1 clone RP4-620F22, complete sequence Length = 110724 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 gatattcccctgttgagagt 499 |||||||||||||||||||| Sbjct: 13547 gatattcccctgttgagagt 13566
>ref|NM_005008.2| Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) (NHP2L1), transcript variant 1, mRNA Length = 1601 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 364 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 305 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 304 ttccgaagctgcttatagtt 285
>ref|NM_001003796.1| Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) (NHP2L1), transcript variant 2, mRNA Length = 1520 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 283 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 224 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 223 ttccgaagctgcttatagtt 204
>emb|CR623311.1| full-length cDNA clone CS0DE011YM23 of Placenta of Homo sapiens (human) Length = 1382 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 173 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 114 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 113 ttccgaagctgcttatagtt 94
>emb|CR623174.1| full-length cDNA clone CS0DA009YE02 of Neuroblastoma of Homo sapiens (human) Length = 1092 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 208 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 149 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 148 ttccgaagctgcttatagtt 129
>emb|CR616994.1| full-length cDNA clone CS0DK010YK23 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1366 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 211 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 152 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 151 ttccgaagctgcttatagtt 132
>emb|CR616990.1| full-length cDNA clone CS0DH007YI19 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1413 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 202 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 143 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 142 ttccgaagctgcttatagtt 123
>emb|CR614137.1| full-length cDNA clone CS0DJ005YB10 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1353 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 173 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 114 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 113 ttccgaagctgcttatagtt 94
>emb|CR613725.1| full-length cDNA clone CS0DC017YM06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1459 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 251 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 192 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 191 ttccgaagctgcttatagtt 172
>emb|CR612873.1| full-length cDNA clone CS0DC024YJ07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1659 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 476 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 417 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 416 ttccgaagctgcttatagtt 397
>emb|CR605954.1| full-length cDNA clone CS0DC024YA08 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1626 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 442 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 383 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 382 ttccgaagctgcttatagtt 363
>emb|CR602484.1| full-length cDNA clone CS0DJ008YG20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1481 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 267 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 208 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 207 ttccgaagctgcttatagtt 188
>emb|CR600974.1| full-length cDNA clone CS0DB009YP18 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1358 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 162 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 103 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 102 ttccgaagctgcttatagtt 83
>emb|CR600000.1| full-length cDNA clone CS0DJ012YD12 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 991 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 248 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 189 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 188 ttccgaagctgcttatagtt 169
>emb|CR595064.1| full-length cDNA clone CS0DN001YL05 of Adult brain of Homo sapiens (human) Length = 1349 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 173 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 114 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 113 ttccgaagctgcttatagtt 94
>emb|CR593477.1| full-length cDNA clone CS0DC025YF02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1424 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 270 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 211 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 210 ttccgaagctgcttatagtt 191
>emb|CR593383.1| full-length cDNA clone CS0DK007YN07 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1449 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 261 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 202 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 201 ttccgaagctgcttatagtt 182
>emb|CR593004.1| full-length cDNA clone CS0DC023YC02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1659 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 476 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 417 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 416 ttccgaagctgcttatagtt 397
>emb|CR591470.1| full-length cDNA clone CS0DB003YC24 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1630 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 434 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 375 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 374 ttccgaagctgcttatagtt 355
>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence Length = 142656 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tatagctgaaaaacataaaa 157 |||||||||||||||||||| Sbjct: 53447 tatagctgaaaaacataaaa 53466
>ref|NM_079975.2| Drosophila melanogaster hoi-polloi CG3949-RA (hoip), mRNA Length = 570 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 492 ttgagagtcttggtcgcttcgttggctccctt 523 ||||| |||||||| || |||||||||||||| Sbjct: 238 ttgagggtcttggtggcctcgttggctccctt 207
>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence Length = 154939 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tatagctgaaaaacataaaa 157 |||||||||||||||||||| Sbjct: 4433 tatagctgaaaaacataaaa 4452
>dbj|AB169618.1| Macaca fascicularis brain cDNA, clone: QtrA-11204, similar to human NHP2 non-histone chromosome protein 2-like 1 (S.cerevisiae) (NHP2L1), mRNA, RefSeq: NM_005008.1 Length = 1534 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 277 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 218 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 217 ttccgaagctgcttatagtt 198
>gb|BC103317.2| Bos taurus cDNA clone MGC:129115 IMAGE:8122031, complete cds Length = 1438 Score = 40.1 bits (20), Expect = 8.7 Identities = 119/152 (78%) Strand = Plus / Minus Query: 390 acatacggcacattcttgtcctccgcgagcaacgggaggtggaggaggatttcgagcggc 449 ||||| ||||| ||||||||||| |||| ||||||||| |||| ||| || | ||| Sbjct: 300 acatagggcacgttcttgtcctcacacagcagcgggaggtgcaggatgatctccaagggc 241 Query: 450 tccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgct 509 |||| || || |||||||| | |||||| || || || |||||||| || ||||| || Sbjct: 240 tccgcatctgcggccatcacaatgaactcagagatgcctctgttgagggttttggtggcc 181 Query: 510 tcgttggctcccttcttgagctgcttgtagtt 541 || |||||||| || |||||||||||||| Sbjct: 180 tcattggctccttttcgaagctgcttgtagtt 149
>ref|NM_001026666.1| Caenorhabditis elegans Glucose-6-Phosphate Isomerase family member (gpi-1) (gpi-1) mRNA, complete cds Length = 1708 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tatgagaagcttctcgatgg 267 |||||||||||||||||||| Sbjct: 923 tatgagaagcttctcgatgg 942
>ref|NM_001026667.1| Caenorhabditis elegans Glucose-6-Phosphate Isomerase family member (gpi-1) (gpi-1) mRNA, complete cds Length = 1914 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tatgagaagcttctcgatgg 267 |||||||||||||||||||| Sbjct: 976 tatgagaagcttctcgatgg 995
>emb|AL115549.1|CNS01CHX Botrytis cinerea strain T4 cDNA library Length = 636 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 491 gttgagagtcttggtcgcttcgttggctcccttctt 526 |||||| |||||||| | ||||||||||||||||| Sbjct: 223 gttgagggtcttggtggtctcgttggctcccttctt 188
>gb|AF129858.1|AF129858 Zea mays CENPCB protein (CenpcB) mRNA, partial cds Length = 1495 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 tcccttcttgagctgcttgt 537 |||||||||||||||||||| Sbjct: 912 tcccttcttgagctgcttgt 893
>gb|AC007291.24|AC007291 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR02I05, complete sequence Length = 176075 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 492 ttgagagtcttggtcgcttcgttggctccctt 523 ||||| |||||||| || |||||||||||||| Sbjct: 120131 ttgagggtcttggtggcctcgttggctccctt 120162
>gb|BC019282.2| Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone IMAGE:2823291), partial cds Length = 1408 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 171 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 112 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 111 ttccgaagctgcttatagtt 92
>gb|AF208396.1|AF208396 Drosophila melanogaster Hoi-polloi (hoip) mRNA, complete cds Length = 566 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 492 ttgagagtcttggtcgcttcgttggctccctt 523 ||||| |||||||| || |||||||||||||| Sbjct: 222 ttgagggtcttggtggcctcgttggctccctt 191
>gb|AF175919.1|AF175919 Drosophila melanogaster hoip[k07104] P element insertion region Length = 394 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 492 ttgagagtcttggtcgcttcgttggctccctt 523 ||||| |||||||| || |||||||||||||| Sbjct: 253 ttgagggtcttggtggcctcgttggctccctt 222
>gb|BT003523.1| Drosophila melanogaster RE22964 full insert cDNA Length = 3782 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 492 ttgagagtcttggtcgcttcgttggctccctt 523 ||||| |||||||| || |||||||||||||| Sbjct: 238 ttgagggtcttggtggcctcgttggctccctt 207
>ref|XM_234480.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA A830059I20 (predicted) (LOC299265), mRNA Length = 1213 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tgtcagctgccatcaccacg 473 |||||||||||||||||||| Sbjct: 346 tgtcagctgccatcaccacg 327
>gb|AY893533.1| Synthetic construct Homo sapiens clone FLH130980.01X NHP2 non-histone chromosome protein 2-like 1 (NHP2L1) mRNA, complete cds Length = 387 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 170 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 111 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 110 ttccgaagctgcttatagtt 91
>emb|AL357614.5|HS367B10 Homo sapiens chromosome 9 BAC RP11-367B10, complete sequence Length = 182378 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ttgcaaaatatagctgaaaa 149 |||||||||||||||||||| Sbjct: 127144 ttgcaaaatatagctgaaaa 127125
>gb|AF155235.1|AF155235 Homo sapiens 15.5 kD RNA binding protein mRNA, complete cds Length = 596 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 246 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 187 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 186 ttccgaagctgcttatagtt 167
>gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR24A22, complete sequence Length = 183007 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 492 ttgagagtcttggtcgcttcgttggctccctt 523 ||||| |||||||| || |||||||||||||| Sbjct: 3984 ttgagggtcttggtggcctcgttggctccctt 4015
>emb|CR456531.1| Homo sapiens NHP2L1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.NHP2L1) Length = 630 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 199 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 140 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 139 ttccgaagctgcttatagtt 120
>emb|AL110500.1|CEY87G2A Caenorhabditis elegans YAC Y87G2A, complete sequence Length = 123091 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tatgagaagcttctcgatgg 267 |||||||||||||||||||| Sbjct: 88178 tatgagaagcttctcgatgg 88197
>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete sequence Length = 271507 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 492 ttgagagtcttggtcgcttcgttggctccctt 523 ||||| |||||||| || |||||||||||||| Sbjct: 262721 ttgagggtcttggtggcctcgttggctccctt 262690
>gb|AF091076.1|AF091076 Homo sapiens clone 557 OTK27 mRNA, complete cds Length = 554 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 185 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 126 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 125 ttccgaagctgcttatagtt 106
>gb|AY609481.1| Sus scrofa clone Clu_13005.scr.msk.p1.Contig3, mRNA sequence Length = 1436 Score = 40.1 bits (20), Expect = 8.7 Identities = 119/152 (78%) Strand = Plus / Minus Query: 390 acatacggcacattcttgtcctccgcgagcaacgggaggtggaggaggatttcgagcggc 449 ||||| ||||| ||||||||||| |||| |||||||| |||| || || || ||| Sbjct: 326 acatagggcacgttcttgtcctcacacagcagtgggaggtgcaggataatctccaggggc 267 Query: 450 tccgtgtcagctgccatcaccacgaactccgatattcccctgttgagagtcttggtcgct 509 |||| ||| || |||||||| | |||||| || || || |||||||| || ||||| || Sbjct: 266 tccgcgtctgcagccatcacaatgaactcagagatgcctctgttgagggttttggtggcc 207 Query: 510 tcgttggctcccttcttgagctgcttgtagtt 541 || |||||||| || |||||||||||||| Sbjct: 206 tcattggctccttttcgaagctgcttgtagtt 175
>gb|AC136008.5| Mus musculus BAC clone RP24-68J1 from 6, complete sequence Length = 181220 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 cctagtcactccacaagcac 360 |||||||||||||||||||| Sbjct: 141123 cctagtcactccacaagcac 141104
>gb|BC005358.1| Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:12461 IMAGE:3681386), complete cds Length = 589 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 221 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 162 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 161 ttccgaagctgcttatagtt 142
>dbj|AP006388.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39K18, TM0252d, complete sequence Length = 35261 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 447 ggctccgtgtcagctgccatcaccacgaactc 478 ||||| ||||| ||||||||||| |||||||| Sbjct: 29057 ggctcagtgtctgctgccatcacaacgaactc 29088
>dbj|AB036925.1| Citrus unshiu Cit-VATP B-1 gene for vacuolar H+-ATPase B subunit, partial cds Length = 2644 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 aaagacctagcagacaagacacca 178 |||||||| ||||||||||||||| Sbjct: 686 aaagacctggcagacaagacacca 663
>dbj|D50420.1| Homo sapiens mRNA for OTK27, complete cds Length = 1475 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 462 gccatcaccacgaactccgatattcccctgttgagagtcttggtcgcttcgttggctccc 521 |||||||| | |||||| || || ||||||||||| || ||||| || || |||||||| Sbjct: 264 gccatcacgatgaactcagagatgcccctgttgagggttttggtggcctcattggctcct 205 Query: 522 ttcttgagctgcttgtagtt 541 ||| |||||||| ||||| Sbjct: 204 ttccgaagctgcttatagtt 185 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,330,641 Number of Sequences: 3902068 Number of extensions: 5330641 Number of successful extensions: 107585 Number of sequences better than 10.0: 182 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 106931 Number of HSP's gapped (non-prelim): 632 length of query: 640 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 617 effective length of database: 17,143,297,704 effective search space: 10577414683368 effective search space used: 10577414683368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)