ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21m22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACY1_HUMAN (Q03154) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino... 100 2e-21
2ACY1_PIG (P37111) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino-a... 91 1e-18
3DAPE_HAEIN (P44514) Succinyl-diaminopimelate desuccinylase (EC 3... 33 0.37
4LYSK_THET2 (Q8VUS5) Acetyl-lysine deacetylase (EC 3.5.1.-) 31 2.4
5MCA3_CRIGR (P70102) Eukaryotic translation elongation factor 1 e... 30 4.1
6MCA3_MOUSE (Q9D1M4) Eukaryotic translation elongation factor 1 e... 30 5.3
7YKZ8_YEAST (P36114) Protein YKR018C 29 7.0
8CYB_LATCO (Q9MLJ4) Cytochrome b 29 9.1

>ACY1_HUMAN (Q03154) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino-acid|
           amidohydrolase) (ACY-1)
          Length = 408

 Score =  100 bits (250), Expect = 2e-21
 Identities = 45/90 (50%), Positives = 64/90 (71%)
 Frame = -1

Query: 509 PLLTPANASNPWWSVFEQAIISSGGKLAKPEILSSTTDARFVRQMGVPALGFSPMINTPI 330
           P +TP + SNPWW+ F + +        +PEI+ + TD R++R +GVPALGFSPM  TP+
Sbjct: 312 PQVTPTDDSNPWWAAFSR-VCKDMNLTLEPEIMPAATDNRYIRAVGVPALGFSPMNRTPV 370

Query: 329 LLHDHNEFLEDKVFLRGIEVYQHLIRALSS 240
           LLHDH+E L + VFLRG+++Y  L+ AL+S
Sbjct: 371 LLHDHDERLHEAVFLRGVDIYTRLLPALAS 400



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>ACY1_PIG (P37111) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino-acid|
           amidohydrolase) (ACY-1)
          Length = 406

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 45/89 (50%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = -1

Query: 503 LTPANASNPWWSVFEQAIISSGGKLA-KPEILSSTTDARFVRQMGVPALGFSPMINTPIL 327
           +T  + S+PWW+ F    +    KLA + EI  ++TDAR++R  GVPALGFSPM +TP+L
Sbjct: 312 VTSTDDSDPWWAAFSG--VFKDMKLALELEICPASTDARYIRAAGVPALGFSPMNHTPVL 369

Query: 326 LHDHNEFLEDKVFLRGIEVYQHLIRALSS 240
           LHDH+E L + VFLRG+++Y  L+ AL+S
Sbjct: 370 LHDHDERLHEAVFLRGVDIYTQLLSALAS 398



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>DAPE_HAEIN (P44514) Succinyl-diaminopimelate desuccinylase (EC 3.5.1.18)|
           (SDAP)
          Length = 377

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
 Frame = -1

Query: 524 DVTGRPLLT-PANASNPWWSVFEQAIISSGGKLAKPEILSSTTDARFVRQMGVPALGFSP 348
           +++G+P LT P    +   S  E+ I    G   K E    T+D RF+  MG   + F P
Sbjct: 288 NLSGKPFLTKPGKLLDSITSAIEETI----GITPKAETGGGTSDGRFIALMGAEVVEFGP 343

Query: 347 MINTPILLHDHNEFLEDKVFLRGIEVYQHLI 255
           + +T   +H  NE +  +   +  E+Y  ++
Sbjct: 344 LNST---IHKVNECVSVEDLGKCGEIYHKML 371



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>LYSK_THET2 (Q8VUS5) Acetyl-lysine deacetylase (EC 3.5.1.-)|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = -1

Query: 515 GRPLLTPANASNPWWSVFEQAIISSGGKLAKPEILSSTTDARFVR-QMGVPALGFSPMIN 339
           GR +        P    F QAI  +GG+    ++ + T+D   +     VP + + P  +
Sbjct: 264 GREVPYQGPKDTPLTRAFRQAIRKAGGRPVF-KLKTGTSDMNVLAPHWPVPMVAYGPGDS 322

Query: 338 TPILLHDHNEFLEDKVFLRGIEVYQHLIRALS 243
           T  L H   E +E   FL+GIEV +  + AL+
Sbjct: 323 T--LDHTPYEHVEVAEFLKGIEVLRGALEALA 352



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>MCA3_CRIGR (P70102) Eukaryotic translation elongation factor 1 epsilon-1|
           (Multisynthetase complex auxiliary component p18)
           (Elongation factor p18)
          Length = 174

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = -1

Query: 428 AKPEILSSTTDARFVRQMGVPAL-----GFSPMINTPILLHDHNEFLEDKVFLRGIEV 270
           +K  +L ST + + + Q  +        G S   +T  LL D N +LEDKV+L G  +
Sbjct: 56  SKEHLLGSTAEEKALVQQWLEYRITQVDGHSSKEDTHTLLKDLNSYLEDKVYLAGYNI 113



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>MCA3_MOUSE (Q9D1M4) Eukaryotic translation elongation factor 1 epsilon-1|
           (Multisynthetase complex auxiliary component p18)
           (Elongation factor p18)
          Length = 174

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = -1

Query: 428 AKPEILSSTTDARFVRQMGVPAL-----GFSPMINTPILLHDHNEFLEDKVFLRG 279
           +K  +L ST + + + Q  +        G S   +T  LL D N +LEDKV+L G
Sbjct: 56  SKEHLLGSTAEEKAMVQQWLEFRVTRVDGHSSKEDTQTLLKDLNSYLEDKVYLAG 110



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>YKZ8_YEAST (P36114) Protein YKR018C|
          Length = 725

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 19/71 (26%), Positives = 31/71 (43%)
 Frame = -1

Query: 473 WSVFEQAIISSGGKLAKPEILSSTTDARFVRQMGVPALGFSPMINTPILLHDHNEFLEDK 294
           W + E  ++S  G+L +   L  + D   +R   V +L       T I LH ++   ED 
Sbjct: 414 WLLNEARMLSGKGRLEEAVALMDSIDVSKIRMRQVKSLMIFDRAITLIHLHQYDRAAEDI 473

Query: 293 VFLRGIEVYQH 261
           + L  I  + H
Sbjct: 474 LSLLDISDWSH 484



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>CYB_LATCO (Q9MLJ4) Cytochrome b|
          Length = 371

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
 Frame = -1

Query: 509 PLLTPANASNPWWSVFEQAIISS-----GGKLAKPEILSSTTDARFVRQMGVPALGFSPM 345
           PL+TP +    W+ +F   I+ S     GG LA    +   T A F       ++ F P+
Sbjct: 253 PLITPQHIKPEWYFLFAYGILRSIPNKLGGALALTMSIIILTTAPFTHTSYTRSMTFRPL 312

Query: 344 INT 336
             T
Sbjct: 313 AQT 315


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,496,141
Number of Sequences: 219361
Number of extensions: 1609147
Number of successful extensions: 4508
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4505
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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