>FX4L4_HUMAN (Q8WXT5) Forkhead box protein D4-like 4 (Forkhead box protein D4B)|
           (Myeloid factor-gamma)
          Length = 416

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = -1

Query: 395 LRTTCSDARGSTSAHPSTGAGTCSSLPSATCCGCRPPSLLWQ 270
           LR  C   RG+T+   S     C   P   CC C PP LL Q
Sbjct: 341 LRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLLGQ 382

>C1QR1_MOUSE (O89103) Complement component C1q receptor precursor (Complement|
           component 1, q subcomponent, receptor 1) (C1qRp)
           (C1qR(p)) (C1q/MBL/SPA receptor) (CD93 antigen) (Cell
           surface antigen AA4) (Lymphocyte antigen 68)
          Length = 644

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -1

Query: 416 PGLPAAELRTTCSDARGSTSAHPSTGAGTCSSLPSATCCGCRPPS 282
           PG    +   TC+ +R   S++P TG G C S+P +    CR PS
Sbjct: 286 PGFRLLDDLVTCA-SRNPCSSNPCTGGGMCHSVPLSENYTCRCPS 329

>SSPN_HUMAN (Q14714) Sarcospan (K-ras oncogene-associated protein)|
           (Kirsten-ras-associated protein)
          Length = 243

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
 Frame = -1

Query: 380 SDARGSTSAHPSTGAGT---CSSLPSATCCGCRPPSLL 276
           +DA G     P  G G    C      TCCGCR P LL
Sbjct: 19  ADAAGPDDMEPKKGTGAPKECGEEEPRTCCGCRFPLLL 56

>HEM1_DEIRA (Q9RRE5) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 350

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
 Frame = +1

Query: 265 RRCHSKLGGRQ-PQQVAEGKLLQVPAPVLGWALVLPRASLQVVRSSAAGRPGQGMW-EDR 438
           R    KLGGR  P +     L +V   +   A      + Q VR + AGRPG+ M+  D 
Sbjct: 216 RALAEKLGGRACPAEELSAALPEVDVVIASSAAPHYVVTAQNVREALAGRPGRAMFLIDI 275

Query: 439 HHKRLLEEQIGAFAGCSRKLHMQDKQPVVRKQPPIAALMLQKSQAKLQD 585
              R+L+ +I +  G +   ++ D   VV++        L +++A +++
Sbjct: 276 SVPRILDPEIASVPG-AHLYNLDDLTAVVQRNMQSRRAALPQAEAIIRE 323

>UL87_HCMVA (P16730) Protein UL87|
          Length = 941

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = -1

Query: 365 STSAHPSTGAGTCSSLPSATCCGCRPPSLLWQRRHVLLISRLVLSTHGHVYLRSC 201
           S++A P+T AG   SLP       R P+    RR+V +ISRL+ + +G  + + C
Sbjct: 434 SSTALPTTSAGHKLSLP-------RDPAADRVRRYVCIISRLMYARYGERWRKHC 481

>MD1L1_MOUSE (Q9WTX8) Mitotic spindle assembly checkpoint protein MAD1 (Mitotic|
           arrest deficient-like protein 1) (MAD1-like 1)
          Length = 717

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
 Frame = +1

Query: 355 ALVLPRASLQVVRSSAAGRPGQGMWEDRHHKRLLEEQIGAFA----GCSRKLHMQDKQPV 522
           A V+     +++R     R  + + E+  H R ++E  G       G  RKL  Q+K   
Sbjct: 239 AAVVKSMKSELMRMPRMERELKRLHEENTHLREMKETNGLLTEELEGLQRKLSRQEKM-- 296

Query: 523 VRKQPPIAALMLQKSQ--AKLQDYEHLDQ 603
              Q  +  L L+K +  AKLQ +E+LDQ
Sbjct: 297 ---QEALVDLELEKEKLLAKLQSWENLDQ 322

>SSPN_RABIT (P82352) Sarcospan|
          Length = 238

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = -1

Query: 377 DARGSTSAHPSTGAGTCSSL---PSATCCGCRPPSLL 276
           DA G     P  GAGT        + TCCGCR P LL
Sbjct: 15  DAAGPDDPGPKKGAGTREQRGEEEAQTCCGCRFPLLL 51

>PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)|
          Length = 1004

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -3

Query: 540 GGLLTHNRLLILHMELTTTASKCPNLLLKQPLMVPILPHTLPRPTRS-RATHNLQRCPWQ 364
           GGL  H   +I+  E  T  S CP   L   + VP LP ++P    S   T  LQR   Q
Sbjct: 591 GGLQNHTVGIIVKTENATGPSSCPQRSL---VPVPSLPPSIPSSCASIENTSTLQRKTVQ 647

Query: 363 HQCPP 349
            Q  P
Sbjct: 648 SQIGP 652

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
 Frame = -1

Query: 413 GLPAAELRTTCSDARGSTSAHPSTGAGTCSSLPSA---TCC----GCRPPSLLW 273
           G P    RT+C+ + G+ +A   T A TC+S PSA   +CC     C  P+  W
Sbjct: 177 GAPLCSYRTSCAGSCGARTA--PTPAPTCAS-PSAAASSCCRRRRACSSPTTAW 227

>LGT_AZOBR (Q8KSV0) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 268

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 316 GKLLQVPAPVLGWALVLPRASLQVVR 393
           G+L   PAP + WA+V PR  LQV R
Sbjct: 148 GELYGRPAPDVSWAVVFPRDPLQVPR 173

>NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 precursor (Notch|
           4) [Contains: Transforming protein Int-3; Notch 4
           extracellular truncation; Notch 4 intracellular domain]
          Length = 1964

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 407 PAAELRTTCSDARGSTSAHPSTGAGTCSSLPSATCCGCRP 288
           PA  +  TCS+   +  + P    G+CS  P    C C P
Sbjct: 715 PAGYMGLTCSEEVTACHSGPCLNGGSCSIRPEGYSCTCLP 754

>MD1L1_CRIGR (Q80YF0) Mitotic spindle assembly checkpoint protein MAD1 (Mitotic|
           arrest deficient-like protein 1) (MAD1-like 1)
          Length = 717

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
 Frame = +1

Query: 355 ALVLPRASLQVVRSSAAGRPGQGMWEDRHHKRLLEEQIGAFA----GCSRKLHMQDKQPV 522
           A V+     +++R     R  + + E+  H R ++E  G       G  RKL  Q+K   
Sbjct: 239 AAVVKNMKSELLRLPRMERELKRLREENTHLREMKETNGLLTEELEGLQRKLGRQEKM-- 296

Query: 523 VRKQPPIAALMLQKSQ--AKLQDYEHLDQ 603
              Q  +  L L+K +  AKLQ +E LDQ
Sbjct: 297 ---QEALVDLELEKEKLLAKLQSWEKLDQ 322

>THYG_BOVIN (P01267) Thyroglobulin precursor|
          Length = 2769

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
 Frame = +1

Query: 85  GSRNPGLPSLA---CCCQKTCLPMQT-ITQGFTSYVDAFRDGRQ-------LRRYTCPCV 231
           GSR PG P+     C  QK  + + + I    TSY+   +D          LRR  C CV
Sbjct: 82  GSRQPGRPAACLSFCQLQKQQILLSSYINSTATSYLPQCQDSGDYSPVQCDLRRRQCWCV 141

Query: 232 DNTNLEISST 261
           D   +E+  T
Sbjct: 142 DAEGMEVYGT 151

>GRN_HUMAN (P28799) Granulins precursor (Proepithelin) (PEPI) [Contains:|
           Acrogranin; Paragranulin; Granulin-1 (Granulin G);
           Granulin-2 (Granulin F); Granulin-3 (Granulin B);
           Granulin-4 (Granulin A); Granulin-5 (Granulin C);
           Granulin-6 (Granulin D); Granul
          Length = 593

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 21/78 (26%), Positives = 29/78 (37%)
 Frame = -1

Query: 533 CLRTTGCLSCIWSLRLQPANAPIXXXXXXXXXXXSHIPCPGLPAAELRTTCSDARGSTSA 354
           C+  TG       L  Q  N  +             + CP     + R+ C D  GST  
Sbjct: 178 CITPTGTHPLAKKLPAQRTNRAVALSSS--------VMCP-----DARSRCPD--GSTCC 222

Query: 353 HPSTGAGTCSSLPSATCC 300
              +G   C  +P+ATCC
Sbjct: 223 ELPSGKYGCCPMPNATCC 240

>C1QR1_RAT (Q9ET61) Complement component C1q receptor precursor (Complement|
           component 1, q subcomponent, receptor 1) (C1qRp)
           (C1qR(p)) (C1q/MBL/SPA receptor) (CD93 antigen) (Cell
           surface antigen AA4)
          Length = 643

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -1

Query: 416 PGLPAAELRTTCSDARGSTSAHPSTGAGTCSSLPSATCCGCRPP 285
           PG    +   TC+ +R   S++P TG G C S+P +    C  P
Sbjct: 286 PGFRLLDDLVTCA-SRNPCSSNPCTGGGMCHSVPLSENYTCHCP 328

>LCE2D_HUMAN (Q5TA82) Late cornified envelope protein 2D (Late envelope protein|
           12) (Small proline-rich-like epidermal differentiation
           complex protein 1A)
          Length = 110

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -1

Query: 419 CPGLPAAELRTTCSDARGSTSAHPSTGAGTCSSLPSATCCGCRPPSLLWQRRH 261
           CP   +  + + C  + GS    PS+G G CSS     C     P L  +RRH
Sbjct: 36  CPAPCSPAVSSCCGPSSGSCCG-PSSG-GCCSSGGGGCCLSHHRPRLFHRRRH 86

>CD97_MOUSE (Q9Z0M6) CD97 antigen precursor|
          Length = 818

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = -1

Query: 422 PCPGLPAAELRTTCSDA-RGSTSAHPSTGAGTCSSLPSATCCGCRP 288
           P PG P   + T C D    S+  H    +  C +   +  C CRP
Sbjct: 199 PVPGSPNGPVSTVCEDVDECSSGQHQCHNSTVCKNTVGSYKCHCRP 244

>NOTC1_HUMAN (P46531) Neurogenic locus notch homolog protein 1 precursor (Notch 1)|
            (hN1) (Translocation-associated notch protein TAN-1)
            [Contains: Notch 1 extracellular truncation; Notch 1
            intracellular domain]
          Length = 2556

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 383  CSDARGSTSAHPSTGAGTCSSLPSATCCGC 294
            CS+      +HP    GTC  LP+   C C
Sbjct: 1181 CSEEIDECLSHPCQNGGTCLDLPNTYKCSC 1210


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,760,889
Number of Sequences: 219361
Number of extensions: 1673143
Number of successful extensions: 5712
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5710
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)