>PM34_MOUSE (O70579) Peroxisomal membrane protein PMP34 (34 kDa peroxisomal|
           membrane protein) (Solute carrier family 25 member 17)
          Length = 307

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 17/47 (36%), Positives = 32/47 (68%)
 Frame = -2

Query: 500 MLGXMHAMWXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKISKFTW 360
           +L  +H    + GI G +KGL A++L+ VL++AL+ ++ EK++  T+
Sbjct: 250 VLSLLHQRVKRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATF 296

>PM34_HUMAN (O43808) Peroxisomal membrane protein PMP34 (34 kDa peroxisomal|
           membrane protein) (Solute carrier family 25 member 17)
          Length = 307

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 19/55 (34%), Positives = 38/55 (69%)
 Frame = -2

Query: 500 MLGXMHAMWXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKISKFTWISLLALRR 336
           +L  +H    + GI G +KGL A++L+ VL++AL+ ++ EK++  T+ +++ L+R
Sbjct: 250 ILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATF-TVMGLKR 303

>PM47A_CANBO (P21245) Peroxisomal membrane protein PMP47A|
          Length = 423

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = -2

Query: 512 PPXXMLGXMHAMWXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKI 375
           P   M    + M+ +EG+  F++GL  ++L+ +L++A L   KE++
Sbjct: 325 PIVSMFTLGYGMYKEEGVSSFYRGLSVKLLQSILNAAFLFYFKEEL 370

>PM47B_CANBO (Q00319) Peroxisomal membrane protein PMP47B|
          Length = 419

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 18/59 (30%), Positives = 33/59 (55%)
 Frame = -2

Query: 485 HAMWXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKISKFTWISLLALRRYLFVSRKRI 309
           + M+ +EG+  F++GL  ++L+ +L++A L   KE+        LL L   +  S KR+
Sbjct: 330 YKMYKEEGVSSFYRGLSVKLLQSILNAAFLFYFKEE--------LLILSDAIIKSTKRV 380

>ARG13_NEUCR (Q01356) Amino acid transporter arg-13|
          Length = 363

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -2

Query: 482 AMWXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKISKF 366
           A+W + GI GF++G    +L+   SSA + M+ + + K+
Sbjct: 321 ALWKQAGIKGFYRGCGITVLRSAPSSAFIFMVYDGLKKY 359

>MFTC_MOUSE (Q8BMG8) Mitochondrial folate transporter/carrier (Solute carrier|
           family 25 member 32)
          Length = 316

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -2

Query: 476 WXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKISKFTW 360
           W KEGI GF+KG+   +++   +  +  ++ E +S F +
Sbjct: 270 WRKEGIGGFYKGIAPNLIRVTPACCITFVVYENVSHFLY 308

>MFTC_MACFA (Q95J75) Mitochondrial folate transporter/carrier (Solute carrier|
           family 25 member 32)
          Length = 315

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 476 WXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKISKF 366
           W KEGI GF+KG+   +++   +  +  ++ E +S F
Sbjct: 270 WRKEGIGGFYKGIAPNLIRVTPACCITFVVYENVSHF 306

>MFTC_HUMAN (Q9H2D1) Mitochondrial folate transporter/carrier (Solute carrier|
           family 25 member 32)
          Length = 315

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -2

Query: 476 WXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKISKF 366
           W KEG+ GF+KG+   +++   +  +  ++ E +S F
Sbjct: 270 WRKEGVGGFYKGIAPNLIRVTPACCITFVVYENVSHF 306

>CMC2_CAEEL (Q20799) Probable calcium-binding mitochondrial carrier F55A11.4|
          Length = 588

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -2

Query: 518 SXPPXXMLGXMHAMWXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKI 375
           S  P  M G    +   EG+ GF++G+    LK + + ++  ++ EK+
Sbjct: 479 SPQPDTMFGQFKYILQNEGVTGFYRGITPNFLKVIPAVSISYVVYEKV 526

>SNTG1_MOUSE (Q925E1) Gamma-1-syntrophin (G1SYN) (Syntrophin 4) (SYN4)|
          Length = 517

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 444 RITCSDTKXGSELCITADDKREDFKVHLDLA 352
           R TC +TK G  +C+  D  +E FKV L LA
Sbjct: 4   RTTCEETKTG--VCLLQDGNQEPFKVRLHLA 32

>ALO_KLULA (Q6CSY3) D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) (ALO)|
           (L-galactono-gamma-lactone oxidase)
          Length = 525

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
 Frame = +3

Query: 24  TRMVPELPDHNHITRTTSGQHLFHTVFPF----QVHIRYSELHEKTNEFIQNIPWRSQDD 191
           T +  E+PD+++ T+T++G    +T+ P+      H+RY+ L + TN  +          
Sbjct: 366 TTLPAEIPDYSNRTKTSAGPVFGNTLRPYLDATPRHLRYAPLSDVTNSQLS--------- 416

Query: 192 CVLLHASVLLSFGS 233
            + ++A++   FGS
Sbjct: 417 -LYINATIYRPFGS 429

>YG2O_YEAST (P53257) Putative mitochondrial carrier YGR096W|
          Length = 314

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 479 MWXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKI 375
           +W  EG+PGFFKG  A +    L+++++    E I
Sbjct: 158 IWKLEGLPGFFKGSIASMTTITLTASIMFGTYETI 192

>CCPH_SHV21 (Q01016) Complement control protein homolog precursor (CCPH)|
          Length = 360

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +2

Query: 77  WTTPIPYCISIPSTYQILRATRKNK*IYSEHSMALSGRLCSSACFCSFVIW*YKILKYLW 256
           W+  IP C+ I S    +     N     E +   SGR+C+  C  S     Y I+   +
Sbjct: 257 WSPAIPECMKISSPKGDMPGINSN-----EDNSTPSGRICNGNCTTSMPTQTYTIITARY 311

Query: 257 TIRLVF-SGLTY 289
           T  + F +G TY
Sbjct: 312 TSHIYFPTGKTY 323

>DNC_HUMAN (Q9HC21) Mitochondrial deoxynucleotide carrier (Solute carrier|
           family 25 member 19) (Mitochondrial uncoupling protein
           1)
          Length = 320

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 470 KEGIPGFFKGLHAQILKXVLSSALLLMIKE 381
           KEG  GFFKGL   +LK  LS+  +    E
Sbjct: 275 KEGALGFFKGLSPSLLKAALSTGFMFFSYE 304

>YC55L_SYNY3 (P74126) Ycf55-like protein|
          Length = 562

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/64 (23%), Positives = 30/64 (46%)
 Frame = +1

Query: 31  WYQNYQTTITSPELLLDNTYSILYFHSKYISDTQSYTKKQMNLFRTFHGALRTIVFFCML 210
           WY  +     +P+ + ++ +++LY     I  TQ Y  +Q  L +     LR + +F  +
Sbjct: 447 WYYQFSRYWLNPKQIFESQHTLLYLTPAGIVTTQVYAPRQQELTQ-----LRAVPWFVTI 501

Query: 211 LFFC 222
           +  C
Sbjct: 502 VLEC 505

>MFRN1_BRARE (Q287T7) Mitoferrin-1 (Mitochondrial iron transporter 1) (Solute|
           carrier family 25 member 37) (Protein frascati)
          Length = 332

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = -2

Query: 500 MLGXMHAMWXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKISKF 366
           M+  +  ++   G+P FFKG+ A+++  + S+A+   + E    F
Sbjct: 270 MVNALRTVYRLGGVPAFFKGIQARVIYQMPSTAIAWSVYEFFKYF 314

>DNC_PONPY (Q5NVC1) Mitochondrial deoxynucleotide carrier (Solute carrier|
           family 25 member 19)
          Length = 320

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 470 KEGIPGFFKGLHAQILKXVLSSALL 396
           KEG  GFFKGL   +LK  LS+  +
Sbjct: 275 KEGALGFFKGLSPSLLKAALSTGFM 299

>DNC_MACFA (Q5IS35) Mitochondrial deoxynucleotide carrier (Solute carrier|
           family 25 member 19)
          Length = 320

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 470 KEGIPGFFKGLHAQILKXVLSSALL 396
           KEG  GFFKGL   +LK  LS+  +
Sbjct: 275 KEGALGFFKGLSPSLLKAALSTGFM 299

>SNTG1_HUMAN (Q9NSN8) Gamma-1-syntrophin (G1SYN) (Syntrophin 4) (SYN4)|
          Length = 517

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 444 RITCSDTKXGSELCITADDKREDFKVHLDLA 352
           R  C +TK G  +C+  D  +E FKV L LA
Sbjct: 4   RTACEETKTG--ICLLQDGNQEPFKVRLHLA 32

>ENV_HV1MN (P05877) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 856

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 8/27 (29%)
 Frame = -3

Query: 145 FSCSSEYLIC--------TWNGNTVWN 89
           F+C  E+  C        TWNGN  WN
Sbjct: 379 FNCGGEFFYCNTSPLFNSTWNGNNTWN 405

>CMC3_CAEEL (Q19529) Probable calcium-binding mitochondrial carrier F17E5.2|
          Length = 531

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -2

Query: 518 SXPPXXMLGXMHAMWXKEGIPGFFKGLHAQILKXVLSSALLLMIKEKISK 369
           S  P  M+G    +   EG  G ++G+    +K + + ++  ++ EK+ K
Sbjct: 475 STQPDTMVGQFKHILQTEGFTGLYRGITPNFMKVIPAVSISYVVYEKVRK 524

>FCT_DICD3 (Q47162) Ferrichrysobactin receptor precursor|
          Length = 735

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 84  HLFHTVFPFQVHIRYSELHEK 146
           H F+ VF FQ ++RY++L EK
Sbjct: 323 HSFNDVFSFQQNVRYTQLREK 343


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,041,307
Number of Sequences: 219361
Number of extensions: 1434184
Number of successful extensions: 3676
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3675
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)