| Clone Name | rbags21m08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Minus Query: 92 gtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaaggcca 151 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 87657 gtcatcttgctctggatttgcctgtgcacatgcacaaggaactccacataggaaaggcca 87598 Query: 152 ccaggtgctttgtcctc 168 |||||||| |||||||| Sbjct: 87597 ccaggtgccttgtcctc 87581 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 233 taagagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaatgca 292 ||||| |||||||| || ||||||||||| | |||||||| || |||| |||| | || Sbjct: 87351 taagaacatctctggcgtcttatttcattaattacttcatttaccttccgtgacagttca 87292 Query: 293 ttatcaaattgctccaa 309 || |||||||||||||| Sbjct: 87291 ttgtcaaattgctccaa 87275 Score = 46.1 bits (23), Expect = 0.12 Identities = 40/46 (86%) Strand = Plus / Minus Query: 381 catttccgacatagataaaaccatcctcgccattntccaataaata 426 ||||||| ||||| || | ||||||||| ||||| ||||||||||| Sbjct: 87050 catttcctacataaattagaccatcctcaccattttccaataaata 87005
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Minus Query: 92 gtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaaggcca 151 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 16347222 gtcatcttgctctggatttgcctgtgcacatgcacaaggaactccacataggaaaggcca 16347163 Query: 152 ccaggtgctttgtcctc 168 |||||||| |||||||| Sbjct: 16347162 ccaggtgccttgtcctc 16347146 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 233 taagagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaatgca 292 ||||| |||||||| || ||||||||||| | |||||||| || |||| |||| | || Sbjct: 16346916 taagaacatctctggcgtcttatttcattaattacttcatttaccttccgtgacagttca 16346857 Query: 293 ttatcaaattgctccaa 309 || |||||||||||||| Sbjct: 16346856 ttgtcaaattgctccaa 16346840 Score = 46.1 bits (23), Expect = 0.12 Identities = 40/46 (86%) Strand = Plus / Minus Query: 381 catttccgacatagataaaaccatcctcgccattntccaataaata 426 ||||||| ||||| || | ||||||||| ||||| ||||||||||| Sbjct: 16346615 catttcctacataaattagaccatcctcaccattttccaataaata 16346570
>dbj|AK058672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H04, full insert sequence Length = 2175 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Minus Query: 92 gtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaaggcca 151 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 1731 gtcatcttgctctggatttgcctgtgcacatgcacaaggaactccacataggaaaggcca 1672 Query: 152 ccaggtgctttgtcctc 168 |||||||| |||||||| Sbjct: 1671 ccaggtgccttgtcctc 1655 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 233 taagagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaatgca 292 ||||| |||||||| || ||||||||||| | |||||||| || |||| |||| | || Sbjct: 1590 taagaacatctctggcgtcttatttcattaattacttcatttaccttccgtgacagttca 1531 Query: 293 ttatcaaattgctccaa 309 || |||||||||||||| Sbjct: 1530 ttgtcaaattgctccaa 1514
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Minus Query: 92 gtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaaggcca 151 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 16437201 gtcatcttgctctggatttgcctgtgcacatgcacaaggaactccacataggaaaggcca 16437142 Query: 152 ccaggtgctttgtcctc 168 |||||||| |||||||| Sbjct: 16437141 ccaggtgccttgtcctc 16437125 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 233 taagagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaatgca 292 ||||| |||||||| || ||||||||||| | |||||||| || |||| |||| | || Sbjct: 16436895 taagaacatctctggcgtcttatttcattaattacttcatttaccttccgtgacagttca 16436836 Query: 293 ttatcaaattgctccaa 309 || |||||||||||||| Sbjct: 16436835 ttgtcaaattgctccaa 16436819 Score = 46.1 bits (23), Expect = 0.12 Identities = 40/46 (86%) Strand = Plus / Minus Query: 381 catttccgacatagataaaaccatcctcgccattntccaataaata 426 ||||||| ||||| || | ||||||||| ||||| ||||||||||| Sbjct: 16436594 catttcctacataaattagaccatcctcaccattttccaataaata 16436549
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 113 bits (57), Expect = 6e-22 Identities = 144/176 (81%) Strand = Plus / Plus Query: 318 gatttggtgcaccagccaaggatgagagaccaaatatttgctccagggnggccgggttca 377 |||||||| | |||||||| ||||| | ||||||||||||||| |||| ||| ||||| | Sbjct: 13860971 gatttggtactccagccaaagatgaaacaccaaatatttgctcaagggtggcagggttta 13861030 Query: 378 ccgcatttccgacatagataaaaccatcctcgccattntccaataaataaatcccatcat 437 | |||||||||||||| | |||||||||||| ||||| ||||| |||||||| ||| || Sbjct: 13861031 ctgcatttccgacataaacaaaaccatcctcaccattttccaacaaataaattccaaaat 13861090 Query: 438 cctgnatatnctcactatngagagnaaggggatnnggaataagggaancctcatca 493 | | ||| |||||||| ||| | |||||| | || ||||||||| | |||||| Sbjct: 13861091 caagcgtattctcactattgagtgtaagggggtttggtataagggaatcatcatca 13861146 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 88 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 147 ||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 13860418 tcaggtcatcttgctttggatttgcctatgaacatgtacaaggaactctacataagaaag 13860477 Query: 148 gccaccaggtgctttgtcctccaccaa 174 |||||||||||| ||||| || ||||| Sbjct: 13860478 gccaccaggtgccttgtcttcgaccaa 13860504 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 236 gagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaatgcatta 295 ||||||||||||||||||||||||||||| |||||||| ||||||||||| | | | ||| Sbjct: 13860731 gagcatctctgtcgccttatttcattcaccacttcatttactttcctggaaagttcgtta 13860790 Query: 296 tcaaattgctccaatgccaac 316 ||| ||||||||||| ||||| Sbjct: 13860791 tcatattgctccaataccaac 13860811
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 113 bits (57), Expect = 6e-22 Identities = 144/176 (81%) Strand = Plus / Plus Query: 318 gatttggtgcaccagccaaggatgagagaccaaatatttgctccagggnggccgggttca 377 |||||||| | |||||||| ||||| | ||||||||||||||| |||| ||| ||||| | Sbjct: 13815251 gatttggtactccagccaaagatgaaacaccaaatatttgctcaagggtggcagggttta 13815310 Query: 378 ccgcatttccgacatagataaaaccatcctcgccattntccaataaataaatcccatcat 437 | |||||||||||||| | |||||||||||| ||||| ||||| |||||||| ||| || Sbjct: 13815311 ctgcatttccgacataaacaaaaccatcctcaccattttccaacaaataaattccaaaat 13815370 Query: 438 cctgnatatnctcactatngagagnaaggggatnnggaataagggaancctcatca 493 | | ||| |||||||| ||| | |||||| | || ||||||||| | |||||| Sbjct: 13815371 caagcgtattctcactattgagtgtaagggggtttggtataagggaatcatcatca 13815426 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 88 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 147 ||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 13814698 tcaggtcatcttgctttggatttgcctatgaacatgtacaaggaactctacataagaaag 13814757 Query: 148 gccaccaggtgctttgtcctccaccaa 174 |||||||||||| ||||| || ||||| Sbjct: 13814758 gccaccaggtgccttgtcttcgaccaa 13814784 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 236 gagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaatgcatta 295 ||||||||||||||||||||||||||||| |||||||| ||||||||||| | | | ||| Sbjct: 13815011 gagcatctctgtcgccttatttcattcaccacttcatttactttcctggaaagttcgtta 13815070 Query: 296 tcaaattgctccaatgccaac 316 ||| ||||||||||| ||||| Sbjct: 13815071 tcatattgctccaataccaac 13815091
>emb|BX667525.2|CNS09SC3 Oryza sativa chromosome 12, . Partial sequence from PAC P0185F07 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 50021 Score = 113 bits (57), Expect = 6e-22 Identities = 144/176 (81%) Strand = Plus / Plus Query: 318 gatttggtgcaccagccaaggatgagagaccaaatatttgctccagggnggccgggttca 377 |||||||| | |||||||| ||||| | ||||||||||||||| |||| ||| ||||| | Sbjct: 29774 gatttggtactccagccaaagatgaaacaccaaatatttgctcaagggtggcagggttta 29833 Query: 378 ccgcatttccgacatagataaaaccatcctcgccattntccaataaataaatcccatcat 437 | |||||||||||||| | |||||||||||| ||||| ||||| |||||||| ||| || Sbjct: 29834 ctgcatttccgacataaacaaaaccatcctcaccattttccaacaaataaattccaaaat 29893 Query: 438 cctgnatatnctcactatngagagnaaggggatnnggaataagggaancctcatca 493 | | ||| |||||||| ||| | |||||| | || ||||||||| | |||||| Sbjct: 29894 caagcgtattctcactattgagtgtaagggggtttggtataagggaatcatcatca 29949 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 88 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 147 ||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 29221 tcaggtcatcttgctttggatttgcctatgaacatgtacaaggaactctacataagaaag 29280 Query: 148 gccaccaggtgctttgtcctccaccaa 174 |||||||||||| ||||| || ||||| Sbjct: 29281 gccaccaggtgccttgtcttcgaccaa 29307 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 236 gagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaatgcatta 295 ||||||||||||||||||||||||||||| |||||||| ||||||||||| | | | ||| Sbjct: 29534 gagcatctctgtcgccttatttcattcaccacttcatttactttcctggaaagttcgtta 29593 Query: 296 tcaaattgctccaatgccaac 316 ||| ||||||||||| ||||| Sbjct: 29594 tcatattgctccaataccaac 29614
>gb|AY107397.1| Zea mays PCO076624 mRNA sequence Length = 2256 Score = 79.8 bits (40), Expect = 9e-12 Identities = 182/231 (78%) Strand = Plus / Minus Query: 229 caagtaagagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaa 288 |||||| ||||| ||||| || ||||||||||| || ||||| || || ||||| || | Sbjct: 1698 caagtatgagcacctctggcgtcttatttcatttacaacttcgttaaccttcctcgagag 1639 Query: 289 tgcattatcaaattgctccaatgccaacagatttggtgcaccagccaaggatgagagacc 348 | | || |||||||||||||| |||||| | |||| ||||||| || |||| ||| Sbjct: 1638 ttcgttgtcaaattgctccaacgccaactgggctggtaatgcagccaaagaagagacacc 1579 Query: 349 aaatatttgctccagggnggccgggttcaccgcatttccgacatagataaaaccatcctc 408 |||||||| ||||||| ||||| || ||| ||||| ||||| || ||||||||||| Sbjct: 1578 gaatatttgttccagggtagccggatttaccatgtttcctacataaattaaaccatcctc 1519 Query: 409 gccattntccaataaataaatcccatcatcctgnatatnctcactatngag 459 ||||| ||||||||||||| ||||| || || | || |||||||| ||| Sbjct: 1518 accattttccaataaataaactccatcctcttgtacattctcactattgag 1468 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 88 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 147 ||||||||||||||| |||||||||||||| ||||| || |||||||| || ||||| | Sbjct: 1839 tcaggtcatcttgctttggatttgcctgtggacatgcacaaggaactcgacgtaggagaa 1780 Query: 148 gccaccaggtgctttgtcctccac 171 | | ||||| || ||||||||||| Sbjct: 1779 gacgccaggcgccttgtcctccac 1756
>gb|BT016644.1| Zea mays clone Contig477 mRNA sequence Length = 1961 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 88 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 147 ||||||||||||||| |||||||||||||| ||||| || |||||||| || ||||| | Sbjct: 1302 tcaggtcatcttgctttggatttgcctgtggacatgcacaaggaactcgacgtaggagaa 1243 Query: 148 gccaccaggtgctttgtcctccac 171 | | ||||| || ||||||||||| Sbjct: 1242 gacgccaggcgccttgtcctccac 1219 Score = 71.9 bits (36), Expect = 2e-09 Identities = 181/231 (78%) Strand = Plus / Minus Query: 229 caagtaagagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaa 288 |||||| ||||| ||||| || ||||||||||| || |||| || || ||||| || | Sbjct: 1161 caagtatgagcacctctggcgtcttatttcatttacaacttggttaaccttcctcgagag 1102 Query: 289 tgcattatcaaattgctccaatgccaacagatttggtgcaccagccaaggatgagagacc 348 | | || |||||||||||||| |||||| | |||| ||||||| || |||| ||| Sbjct: 1101 ttcgttgtcaaattgctccaacgccaactgggctggtaatgcagccaaagaagagacacc 1042 Query: 349 aaatatttgctccagggnggccgggttcaccgcatttccgacatagataaaaccatcctc 408 |||||||| ||||||| ||||| || ||| ||||| ||||| || ||||||||||| Sbjct: 1041 gaatatttgttccagggtagccggatttaccatgtttcctacataaattaaaccatcctc 982 Query: 409 gccattntccaataaataaatcccatcatcctgnatatnctcactatngag 459 ||||| ||||||||||||| ||||| || || | || |||||||| ||| Sbjct: 981 accattttccaataaataaactccatcctcttgtacattctcactattgag 931
>gb|BT016818.1| Zea mays clone Contig651 mRNA sequence Length = 686 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 88 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 147 ||||||||||||||| |||||||||||||| ||||| || |||||||| || ||||| | Sbjct: 377 tcaggtcatcttgctttggatttgcctgtggacatgcacaaggaactcgacgtaggagaa 436 Query: 148 gccaccaggtgctttgtcctccac 171 | | ||||| || ||||||||||| Sbjct: 437 gacgccaggcgccttgtcctccac 460 Score = 48.1 bits (24), Expect = 0.030 Identities = 72/88 (81%) Strand = Plus / Plus Query: 229 caagtaagagcatctctgtcgccttatttcattcacgacttcattcactttcctggacaa 288 |||||| ||||| ||||| || ||||||||||| || ||||| || || ||||| || | Sbjct: 518 caagtatgagcacctctggcgtcttatttcatttacaacttcgttaaccttcctcgagag 577 Query: 289 tgcattatcaaattgctccaatgccaac 316 | | || |||||||||||||| |||||| Sbjct: 578 ttcgttgtcaaattgctccaacgccaac 605
>gb|BT016902.1| Zea mays clone Contig735 mRNA sequence Length = 987 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 88 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 147 ||||||||||||||| ||||| |||||||| ||||| ||||| |||||| | ||||| | Sbjct: 438 tcaggtcatcttgctttggatctgcctgtggacatgcacgagaaactcctcgtaggagaa 497 Query: 148 gccaccaggtgctttgtcctc 168 | | |||||||| |||||||| Sbjct: 498 gacgccaggtgccttgtcctc 518 Score = 48.1 bits (24), Expect = 0.030 Identities = 85/106 (80%) Strand = Plus / Plus Query: 330 cagccaaggatgagagaccaaatatttgctccagggnggccgggttcaccgcatttccga 389 ||||||| || |||| ||| |||||||| ||||||| ||||| || ||| |||||| | Sbjct: 680 cagccaaagaagagacaccgaatatttgttccagggtagccggatttaccatatttccta 739 Query: 390 catagataaaaccatcctcgccattntccaataaataaatcccatc 435 | |||| | ||||||||| || || ||||||||||| | |||||| Sbjct: 740 cgtagactagaccatcctcaccgttttccaataaatagaccccatc 785
>gb|AY105862.1| Zea mays PCO076623 mRNA sequence Length = 924 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 88 tcaggtcatcttgctctggatttgcctgtgaacatgtacgaggaactccacataggaaag 147 ||||||||||||||| ||||| |||||||| ||||| ||||| |||||| | ||||| | Sbjct: 830 tcaggtcatcttgctttggatctgcctgtggacatgcacgagaaactcctcgtaggagaa 771 Query: 148 gccaccaggtgctttgtcctc 168 | | |||||||| |||||||| Sbjct: 770 gacgccaggtgccttgtcctc 750 Score = 46.1 bits (23), Expect = 0.12 Identities = 188/244 (77%) Strand = Plus / Minus Query: 192 ctccagacgggtcgccctttcggcacagtctcagtcncaagtaagagcatctctgtcgcc 251 ||||||| || |||||| ||| ||| ||||||| | |||||| ||||| ||||| |||| Sbjct: 726 ctccagatggttcgccccttctgcatagtctcaacctcaagtatgagcacctctggcgcc 667 Query: 252 ttatttcattcacgacttcattcactttcctggacaatgcattatcaaattgctccaatg 311 | |||||||| || ||||| || | ||||| || | | | || ||||| |||||||||| Sbjct: 666 taatttcatttacaacttcgttaatcttcctcgagagttcgttgtcaaactgctccaatg 607 Query: 312 ccaacagatttggtgcaccagccaaggatgagagaccaaatatttgctccagggnggccg 371 | ||| | |||| ||||||| || |||| ||| |||||||| ||||||| |||| Sbjct: 606 ctaactgggctggtaatgcagccaaagaagagacaccgaatatttgttccagggtagccg 547 Query: 372 ggttcaccgcatttccgacatagataaaaccatcctcgccattntccaataaataaatcc 431 | || ||| ||||| || |||| | ||||||||| || || ||||||||||| | || Sbjct: 546 gatttaccatgtttcctacgtagactagaccatcctcaccgttttccaataaatagaccc 487 Query: 432 catc 435 |||| Sbjct: 486 catc 483
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 382 atttccgacatagataaaaccat 404 ||||||||||||||||||||||| Sbjct: 174199 atttccgacatagataaaaccat 174177
>ref|NM_102680.2| Arabidopsis thaliana AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding / nucleic acid binding AT1G29400 (AML5) transcript variant AT1G29400.1 mRNA, complete cds Length = 2880 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aatctctaccaaccaaaata 71 |||||||||||||||||||| Sbjct: 34 aatctctaccaaccaaaata 15
>ref|NM_179396.1| Arabidopsis thaliana AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5); RNA binding / nucleic acid binding AT1G29400 (AML5) transcript variant AT1G29400.2 mRNA, complete cds Length = 2921 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aatctctaccaaccaaaata 71 |||||||||||||||||||| Sbjct: 78 aatctctaccaaccaaaata 59
>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15, complete sequence Length = 179357 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 atgaagcttcaggtcatcttgctc 103 |||||||||||| ||||||||||| Sbjct: 135763 atgaagcttcagttcatcttgctc 135786
>gb|AC122344.3| Mus musculus BAC clone RP23-364M19 from chromosome 9, complete sequence Length = 209165 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aataaataaatcccatcatc 438 |||||||||||||||||||| Sbjct: 63923 aataaataaatcccatcatc 63904
>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence Length = 221903 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccaaaatatcacaccaatga 83 |||||||||||||||||||| Sbjct: 103131 ccaaaatatcacaccaatga 103112
>gb|AY070368.1| Arabidopsis thaliana putative RNA-binding protein MEI2 (At1g29400) mRNA, complete cds Length = 2927 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aatctctaccaaccaaaata 71 |||||||||||||||||||| Sbjct: 73 aatctctaccaaccaaaata 54
>emb|AL672240.13| Mouse DNA sequence from clone RP23-27I16 on chromosome 11, complete sequence Length = 224603 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ttcattcacgacttcattca 275 |||||||||||||||||||| Sbjct: 105313 ttcattcacgacttcattca 105294
>gb|AY062613.1| Arabidopsis thaliana RNA-binding protein MEI2, putative (F15D2.30) mRNA, complete cds Length = 2856 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aatctctaccaaccaaaata 71 |||||||||||||||||||| Sbjct: 73 aatctctaccaaccaaaata 54
>dbj|AB179423.1| Macaca fascicularis testis cDNA clone: QtsA-19777, similar to human v-raf murine sarcoma viral oncogene homolog B1 (BRAF), mRNA, RefSeq: NM_004333.2 Length = 2849 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 accaggtgctttgtcctcca 170 |||||||||||||||||||| Sbjct: 2314 accaggtgctttgtcctcca 2333
>gb|AC068667.6|AC068667 Arabidopsis thaliana chromosome 1 BAC F15D2 genomic sequence, complete sequence Length = 130653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aatctctaccaaccaaaata 71 |||||||||||||||||||| Sbjct: 36872 aatctctaccaaccaaaata 36891 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,866,328 Number of Sequences: 3902068 Number of extensions: 4866328 Number of successful extensions: 77317 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77187 Number of HSP's gapped (non-prelim): 129 length of query: 542 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 519 effective length of database: 17,143,297,704 effective search space: 8897371508376 effective search space used: 8897371508376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)