| Clone Name | rbags22b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC147596.5| Gallus gallus BAC clone CH261-29A2 from chromosome unknown, complete sequence Length = 190789 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 agctatttttccagtttattag 93 |||||||||||||||||||||| Sbjct: 132225 agctatttttccagtttattag 132204
>gb|AC005704.1| Homo sapiens X BAC GSHB-227L7 (Genome Systems Human BAC Library) complete sequence Length = 99033 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 caacatatctcttattatatg 176 ||||||||||||||||||||| Sbjct: 45801 caacatatctcttattatatg 45821
>ref|NM_010253.2| Mus musculus galanin (Gal), mRNA Length = 716 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tgcggacaatgttgctctca 61 |||||||||||||||||||| Sbjct: 414 tgcggacaatgttgctctca 395
>emb|CR675446.2|CNS0FK58 Tetraodon nigroviridis full-length cDNA Length = 724 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 tactcagcagcacgtcgcaa 196 |||||||||||||||||||| Sbjct: 562 tactcagcagcacgtcgcaa 581
>emb|CR669085.2|CNS0FF8J Tetraodon nigroviridis full-length cDNA Length = 677 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 tactcagcagcacgtcgcaa 196 |||||||||||||||||||| Sbjct: 516 tactcagcagcacgtcgcaa 535
>gb|AC157780.9| Mus musculus chromosome 3, clone RP23-331L5, complete sequence Length = 184569 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 atggctaaacatgccaaaag 131 |||||||||||||||||||| Sbjct: 109010 atggctaaacatgccaaaag 108991
>gb|BC044055.1| Mus musculus galanin, mRNA (cDNA clone MGC:54666 IMAGE:6476459), complete cds Length = 716 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tgcggacaatgttgctctca 61 |||||||||||||||||||| Sbjct: 414 tgcggacaatgttgctctca 395
>dbj|AK133522.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5033417N12 product:galanin, full insert sequence Length = 714 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tgcggacaatgttgctctca 61 |||||||||||||||||||| Sbjct: 430 tgcggacaatgttgctctca 411
>gb|AC060835.7| Homo sapiens BAC clone RP11-785F11 from 4, complete sequence Length = 160624 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aagagaagctatttttccag 85 |||||||||||||||||||| Sbjct: 70608 aagagaagctatttttccag 70627
>gb|AC124627.22| Mus musculus chromosome 19, clone RP23-435K14, complete sequence Length = 228991 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tgcggacaatgttgctctca 61 |||||||||||||||||||| Sbjct: 97423 tgcggacaatgttgctctca 97404
>emb|AL136520.3|CNS01DW9 Human chromosome 14 DNA sequence BAC C-2325K12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171744 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 aagagaagctatttttccag 85 |||||||||||||||||||| Sbjct: 1566 aagagaagctatttttccag 1547
>gb|L38579.1|MUSGALAN05 Mus musculus galanin gene, exon 5 Length = 228 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tgcggacaatgttgctctca 61 |||||||||||||||||||| Sbjct: 153 tgcggacaatgttgctctca 134
>emb|AL626765.22| Mouse DNA sequence from clone RP23-179N14 on chromosome 19, complete sequence Length = 206196 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tgcggacaatgttgctctca 61 |||||||||||||||||||| Sbjct: 193958 tgcggacaatgttgctctca 193977
>emb|Z23069.1|MMGALANMR M.musculus mRNA for galanin Length = 450 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tgcggacaatgttgctctca 61 |||||||||||||||||||| Sbjct: 193 tgcggacaatgttgctctca 174
>emb|AL161804.4|CNS01RHL Human chromosome 14 DNA sequence BAC R-409I10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 151853 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aagagaagctatttttccag 85 |||||||||||||||||||| Sbjct: 25005 aagagaagctatttttccag 25024 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,814,599 Number of Sequences: 3902068 Number of extensions: 1814599 Number of successful extensions: 121415 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121390 Number of HSP's gapped (non-prelim): 25 length of query: 217 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 195 effective length of database: 17,147,199,772 effective search space: 3343703955540 effective search space used: 3343703955540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)