ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22b01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR407590.7| Zebrafish DNA sequence from clone CH211-153N15 in linkage group 2, complete sequence Length = 176623 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacacaaac 110 ||||||||||||||||||||||| Sbjct: 27969 atatatacagtatatacacaaac 27991
>gb|AC146552.16| Medicago truncatula clone mth2-9d1, complete sequence Length = 113088 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 175 attaaagaaacaagtgaaagtga 197 ||||||||||||||||||||||| Sbjct: 72681 attaaagaaacaagtgaaagtga 72703
>gb|AC174929.1| Mus musculus BAC clone CH25-367I5 from chromosome 3, complete sequence Length = 90189 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 114 tgcatattgatctgaaatctcca 136 ||||||||||||||||||||||| Sbjct: 33490 tgcatattgatctgaaatctcca 33512
>gb|AC105905.10| Mus musculus chromosome 7, clone RP24-79I18, complete sequence Length = 215285 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 245 gactaccatatagtgagaaagaaaaaa 271 ||||||||||||| ||||||||||||| Sbjct: 40861 gactaccatatagagagaaagaaaaaa 40887
>emb|AL359542.13| Human DNA sequence from clone RP6-190D15 on chromosome Xq25-26.1 Contains the 3' end of the ZDHHC9 gene for zinc finger, DHHC domain containing 9 (CGI-89, ZNF379), complete sequence Length = 28858 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 aaaataatatattaaagaaaca 186 |||||||||||||||||||||| Sbjct: 17382 aaaataatatattaaagaaaca 17403
>emb|AL121771.17|HSJ548G19 Human DNA sequence from clone RP4-548G19 on chromosome 20 Contains the 5' end of the ZFP64 gene for zinc finger protein 64 homolog (mouse) and a CpG island, complete sequence Length = 61579 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 163 taaaaataatatattaaagaaa 184 |||||||||||||||||||||| Sbjct: 23223 taaaaataatatattaaagaaa 23244
>emb|CR855397.9| Zebrafish DNA sequence from clone CH73-77E20 in linkage group 18, complete sequence Length = 104077 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 tatatacagtatatacacaaac 110 |||||||||||||||||||||| Sbjct: 60178 tatatacagtatatacacaaac 60157
>emb|BX572645.26| Zebrafish DNA sequence from clone CH211-197M2 in linkage group 11, complete sequence Length = 112739 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 152 taatatacaactaaaaataatatatt 177 |||| ||||||||||||||||||||| Sbjct: 71940 taatttacaactaaaaataatatatt 71965
>emb|CR384085.5| Zebrafish DNA sequence from clone CH211-267K7 in linkage group 5, complete sequence Length = 140947 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 152 taatatacaactaaaaataatatatt 177 |||| ||||||||||||||||||||| Sbjct: 99186 taatttacaactaaaaataatatatt 99211
>dbj|AK174738.1| Ciona intestinalis cDNA, clone:ciht010i10, full insert sequence Length = 545 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 ctataatatacaactaaaaata 170 |||||||||||||||||||||| Sbjct: 464 ctataatatacaactaaaaata 443
>emb|BX470181.7| Zebrafish DNA sequence from clone CH211-91P22 in linkage group 18, complete sequence Length = 186084 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 tatatacagtatatacacaaac 110 |||||||||||||||||||||| Sbjct: 18895 tatatacagtatatacacaaac 18916
>dbj|AK130089.1| Homo sapiens cDNA FLJ26579 fis, clone LNF06863 Length = 1815 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 165 aaaataatatattaaagaaaca 186 |||||||||||||||||||||| Sbjct: 575 aaaataatatattaaagaaaca 554
>emb|CR293524.10| Zebrafish DNA sequence from clone DKEY-57M7 in linkage group 18, complete sequence Length = 190196 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 tatatacagtatatacacaaac 110 |||||||||||||||||||||| Sbjct: 4838 tatatacagtatatacacaaac 4817
>emb|BX005474.6| Zebrafish DNA sequence from clone CH211-141E22 in linkage group 18, complete sequence Length = 106095 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 tatatacagtatatacacaaac 110 |||||||||||||||||||||| Sbjct: 62194 tatatacagtatatacacaaac 62173
>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence Length = 99758 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 151 ataatatacaactaaaaataatatat 176 |||||||| ||||||||||||||||| Sbjct: 87767 ataatatataactaaaaataatatat 87742
>gb|AY692421.1| Arenaria tomentosa trnT-trnL intergenic spacer, partial sequence; chloroplast Length = 557 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 164 aaaaataatatattaaagaaacaagt 189 ||||||||||||||||||||| |||| Sbjct: 448 aaaaataatatattaaagaaaaaagt 473
>gb|AC134402.9| Mus musculus chromosome 5, clone RP24-301D19, complete sequence Length = 199834 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 aagtgaatcaaaaagaaaatt 212 ||||||||||||||||||||| Sbjct: 129546 aagtgaatcaaaaagaaaatt 129566
>gb|BC097207.1| Danio rerio zgc:114157, mRNA (cDNA clone MGC:114157 IMAGE:7426774), complete cds Length = 899 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 36 aaacaaccgttcttataaaaatgta 60 |||||||| |||||||||||||||| Sbjct: 552 aaacaacctttcttataaaaatgta 528
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 gagaaagaaaaaatgctagca 279 ||||||||||||||||||||| Sbjct: 4449014 gagaaagaaaaaatgctagca 4448994
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacacaa 108 ||||||||||||||||||||| Sbjct: 4035591 atatatacagtatatacacaa 4035611
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacacaa 108 ||||||||||||||||||||| Sbjct: 4047308 atatatacagtatatacacaa 4047328
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacacaa 108 ||||||||||||||||||||| Sbjct: 4047681 atatatacagtatatacacaa 4047701
>ref|NM_001030157.1| Danio rerio zgc:114157 (zgc:114157), mRNA Length = 899 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 36 aaacaaccgttcttataaaaatgta 60 |||||||| |||||||||||||||| Sbjct: 552 aaacaacctttcttataaaaatgta 528
>emb|CR626875.10| Zebrafish DNA sequence from clone DKEY-31J4 in linkage group 15, complete sequence Length = 212742 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 tacaactaaaaataatatatt 177 ||||||||||||||||||||| Sbjct: 55613 tacaactaaaaataatatatt 55593
>gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, complete sequence Length = 187058 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 aagtgaatcaaaaagaaaatt 212 ||||||||||||||||||||| Sbjct: 128609 aagtgaatcaaaaagaaaatt 128589
>emb|AL109741.19|HSDJ575N6 Human DNA sequence from clone RP4-575N6 on chromosome 1p21.1-21.3 Contains a novel gene, the EDG1 gene for endothelial differentiation sphingolipid G-protein-coupled receptor 1, a ribosomal protein S20 (RPS20) pseudogene, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene and the 5' end of a novel gene, complete sequence Length = 132438 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 attgatctgaaatctccatgc 139 ||||||||||||||||||||| Sbjct: 58141 attgatctgaaatctccatgc 58161
>gb|AC110597.7| Homo sapiens chromosome 18, clone CTD-2541J13, complete sequence Length = 180310 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 aactaaaaataatatattaaa 180 ||||||||||||||||||||| Sbjct: 39917 aactaaaaataatatattaaa 39937
>gb|AC117510.3| Homo sapiens 3 BAC CTD-2053J20 (CalTech Human BAC Library D) complete sequence Length = 110909 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 tacaactaaaaataatatattaaag 181 ||||||| ||||||||||||||||| Sbjct: 3740 tacaactcaaaataatatattaaag 3764
>emb|BX470259.9| Zebrafish DNA sequence from clone CH211-225N18 in linkage group 15, complete sequence Length = 188687 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 agatatatacagtatatacacaaac 110 ||||| ||||||||||||||||||| Sbjct: 447 agatacatacagtatatacacaaac 471
>gb|AC098848.7| Homo sapiens chromosome 18, clone RP11-839G9, complete sequence Length = 189315 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 aaagaaaattcccttatccaa 223 ||||||||||||||||||||| Sbjct: 155269 aaagaaaattcccttatccaa 155249
>emb|BX927398.6| Zebrafish DNA sequence from clone DKEY-270E21 in linkage group 22, complete sequence Length = 77521 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 taaaaataatatattaaagaaacaa 187 ||||||||||||||||||| ||||| Sbjct: 5509 taaaaataatatattaaaggaacaa 5485
>gb|AC091042.6| Homo sapiens chromosome 18, clone RP11-563H6, complete sequence Length = 149173 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 aactaaaaataatatattaaa 180 ||||||||||||||||||||| Sbjct: 11568 aactaaaaataatatattaaa 11548
>gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, complete sequence Length = 172123 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 aaaaataatatattaaagaaa 184 ||||||||||||||||||||| Sbjct: 72189 aaaaataatatattaaagaaa 72209
>gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence Length = 189732 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 aaaaataatatattaaagaaa 184 ||||||||||||||||||||| Sbjct: 152475 aaaaataatatattaaagaaa 152495
>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5, complete sequence Length = 160041 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 tacaactaaaaataatatatt 177 ||||||||||||||||||||| Sbjct: 112311 tacaactaaaaataatatatt 112291
>gb|AC055725.22| Homo sapiens 3 BAC RP11-470E12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169089 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 ttaaagaaacaagtgaaagtgaatc 200 ||||||||| ||||||||||||||| Sbjct: 153709 ttaaagaaaaaagtgaaagtgaatc 153685
>emb|AL935065.7| Zebrafish DNA sequence from clone CH211-69I14 in linkage group 5, complete sequence Length = 167740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 tacaactaaaaataatatatt 177 ||||||||||||||||||||| Sbjct: 145542 tacaactaaaaataatatatt 145562
>emb|AL954145.13| Zebrafish DNA sequence from clone CH211-284E20 in linkage group 22, complete sequence Length = 160871 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 taatatacaactaaaaataatatat 176 |||| |||||||||||||||||||| Sbjct: 67381 taatttacaactaaaaataatatat 67405
>emb|BX901950.7| Zebrafish DNA sequence from clone DKEY-111C4 in linkage group 6, complete sequence Length = 146043 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 tacaactaaaaataatatatt 177 ||||||||||||||||||||| Sbjct: 124377 tacaactaaaaataatatatt 124397
>emb|AL161753.4|CNS01RHI Human chromosome 14 DNA sequence BAC R-26L16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 164826 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 aataatatattaaagaaacaa 187 ||||||||||||||||||||| Sbjct: 131652 aataatatattaaagaaacaa 131672
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacacaa 108 ||||||||||||||||||||| Sbjct: 4047181 atatatacagtatatacacaa 4047201
>emb|AL359333.6|CNS05TET Human chromosome 14 DNA sequence BAC R-478J3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 151719 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 aataatatattaaagaaacaa 187 ||||||||||||||||||||| Sbjct: 141662 aataatatattaaagaaacaa 141642
>gb|AC167537.7| Mus musculus chromosome 8, clone RP23-99B10, complete sequence Length = 201791 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 atatattaaagaaacaagtgaaag 194 ||||||||||||||| |||||||| Sbjct: 106867 atatattaaagaaactagtgaaag 106844
>gb|DQ215520.1| Taeniopygia guttata clone 0061P0027A10 stromal cell derived factor receptor 1-like mRNA, complete sequence Length = 1486 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aaagatatatacagtatata 103 |||||||||||||||||||| Sbjct: 823 aaagatatatacagtatata 842
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 232295 atatatacagtatatacaca 232314
>gb|AC134443.3| Mus musculus BAC clone RP24-107B13 from chromosome 8, complete sequence Length = 182604 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 atatattaaagaaacaagtgaaag 194 ||||||||||||||| |||||||| Sbjct: 161482 atatattaaagaaactagtgaaag 161505
>gb|BC008767.2| Homo sapiens acyl-Coenzyme A oxidase 1, palmitoyl, transcript variant 1, mRNA (cDNA clone MGC:1198 IMAGE:3051501), complete cds Length = 3464 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aaaaatgctagcatgaatag 286 |||||||||||||||||||| Sbjct: 2872 aaaaatgctagcatgaatag 2853
>gb|AY310402.1| Pichia pastoris phosphatidylinositol 3-kinase gene, complete cds Length = 2904 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 tttcagacaccaatagaaga 335 |||||||||||||||||||| Sbjct: 1614 tttcagacaccaatagaaga 1595
>ref|XM_709884.1| Candida albicans SC5314 hypothetical protein (CaO19.11039), mRNA Length = 768 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aaaaataatatattaaagaa 183 |||||||||||||||||||| Sbjct: 271 aaaaataatatattaaagaa 290
>ref|XM_709822.1| Candida albicans SC5314 karyopherin/transportin (CaO19.3556), mRNA Length = 2847 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 aaaaataatatattaaagaa 183 |||||||||||||||||||| Sbjct: 271 aaaaataatatattaaagaa 290
>gb|AC148914.1| Pan troglodytes fosmid clone CH1251-3937G7 from Y, complete sequence Length = 34934 Score = 40.1 bits (20), Expect = 5.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 76 gaatttggaaagatatatacagtatatacaca 107 ||||||||||| ||||||||||||||||||| Sbjct: 1799 gaatttggaaat-tatatacagtatatacaca 1829
>gb|AC160564.2| Pan troglodytes BAC clone CH251-542C24 from chromosome 5, complete sequence Length = 177047 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 aaaataatatattaaagaaa 184 |||||||||||||||||||| Sbjct: 170261 aaaataatatattaaagaaa 170242
>gb|AC098683.18| Mus musculus strain 129/Sv clone ct7-128f23 map 5, complete sequence Length = 112727 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 4848 atatatacagtatatacaca 4829
>gb|AC149595.2| Xenopus tropicalis clone ISB-166A19, complete sequence Length = 87377 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 54024 atatatacagtatatacaca 54005 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 53983 atatatacagtatatacaca 53964
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tattaaagaaacaagtgaaa 193 |||||||||||||||||||| Sbjct: 34138365 tattaaagaaacaagtgaaa 34138384
>gb|AC145793.2| Xenopus tropicalis clone CH216-157F1, complete sequence Length = 143148 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 70728 atatatacagtatatacaca 70747
>gb|AC115293.5| Mus musculus BAC clone RP23-92N2 from chromosome 5, complete sequence Length = 239951 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 70567 atatatacagtatatacaca 70586
>gb|AC124196.4| Mus musculus BAC clone RP23-296L12 from chromosome 13, complete sequence Length = 193553 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 161806 atatatacagtatatacaca 161787
>emb|AL032634.2|CEY39G8C Caenorhabditis elegans YAC Y39G8C, complete sequence Length = 40053 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 ccaaaaatgataattttcag 321 |||||||||||||||||||| Sbjct: 8187 ccaaaaatgataattttcag 8206
>gb|AC131712.3| Mus musculus BAC clone RP23-193A5 from 17, complete sequence Length = 218758 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 atatattaaagaaacaagtg 190 |||||||||||||||||||| Sbjct: 117482 atatattaaagaaacaagtg 117463
>emb|BX470264.22| Zebrafish DNA sequence from clone CH211-252F13 in linkage group 7, complete sequence Length = 168673 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 90146 atatatacagtatatacaca 90127
>gb|AC115825.11| Mus musculus chromosome 9, clone RP23-444E13, complete sequence Length = 192100 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 tacatgaatgactcacaaaacaac 42 ||||||||||||||| |||||||| Sbjct: 156457 tacatgaatgactcaaaaaacaac 156480
>ref|XM_675060.1| Plasmodium berghei strain ANKA hypothetical protein (PB000029.01.0) partial mRNA Length = 3144 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 taaaaataatatattaaagaaaca 186 |||||||| ||||||||||||||| Sbjct: 1242 taaaaatagtatattaaagaaaca 1265
>gb|AC087289.9| Homo sapiens chromosome 17, clone RP11-552F3, complete sequence Length = 203765 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aaaaatgctagcatgaatag 286 |||||||||||||||||||| Sbjct: 7238 aaaaatgctagcatgaatag 7219
>ref|XM_659946.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.50504) partial mRNA Length = 753 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tattaaagaaacaagtgaaa 193 |||||||||||||||||||| Sbjct: 690 tattaaagaaacaagtgaaa 709
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 4089815 atatatacagtatatacaca 4089834
>gb|AC142296.1| Pan troglodytes BAC clone RP43-97L1 from Y, complete sequence Length = 158231 Score = 40.1 bits (20), Expect = 5.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 76 gaatttggaaagatatatacagtatatacaca 107 ||||||||||| ||||||||||||||||||| Sbjct: 25885 gaatttggaaat-tatatacagtatatacaca 25855
>gb|AC098684.13| Mus musculus strain 129/Sv clone ct7-391l15 map 5, complete sequence Length = 150686 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 98075 atatatacagtatatacaca 98056
>gb|AC163681.3| Mus musculus BAC clone RP24-113I15 from chromosome 14, complete sequence Length = 192183 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 46 tcttataaaaatgtatggtaaggcaaga 73 |||||||||||||||||| | ||||||| Sbjct: 134792 tcttataaaaatgtatggcatggcaaga 134819
>emb|BX470253.2| Human DNA sequence from clone RP11-653A5 on chromosome 1 Contains the 3' end of the gene for cardiac ankyrin repeat kinase (CARK), the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 75492 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 caaaaatgataattttcaga 322 |||||||||||||||||||| Sbjct: 65982 caaaaatgataattttcaga 65963
>emb|AL731550.11| Human DNA sequence from clone RP11-94H3 on chromosome 10 Contains the 5' end of a novel gene, the 3' end of the MBL2 gene for mannose-binding lectin (protein C) 2 soluble (opsonic defect) and a CpG island, complete sequence Length = 102532 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tatagtgagaaagaaaaaat 272 |||||||||||||||||||| Sbjct: 30961 tatagtgagaaagaaaaaat 30980
>emb|CR388032.9| Zebrafish DNA sequence from clone DKEY-22L9 in linkage group 23, complete sequence Length = 271754 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tacaactaaaaataatatat 176 |||||||||||||||||||| Sbjct: 182712 tacaactaaaaataatatat 182693
>emb|CR354557.9| Zebrafish DNA sequence from clone DKEY-34I7 in linkage group 23, complete sequence Length = 127420 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aaagatatatacagtatata 103 |||||||||||||||||||| Sbjct: 41340 aaagatatatacagtatata 41321
>emb|CR858463.1| Pongo pygmaeus mRNA; cDNA DKFZp468K0611 (from clone DKFZp468K0611) Length = 2975 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aaaaatgctagcatgaatag 286 |||||||||||||||||||| Sbjct: 2614 aaaaatgctagcatgaatag 2595
>emb|BX537380.1|HSM805675 Homo sapiens mRNA; cDNA DKFZp686L1882 (from clone DKFZp686L1882); complete cds Length = 2990 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aaaaatgctagcatgaatag 286 |||||||||||||||||||| Sbjct: 2602 aaaaatgctagcatgaatag 2583
>emb|CR847531.7| Zebrafish DNA sequence from clone CH211-145N14 in linkage group 21, complete sequence Length = 150363 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 91756 atatatacagtatatacaca 91775
>emb|CR394542.5| Zebrafish DNA sequence from clone DKEY-91I10 in linkage group 9, complete sequence Length = 193811 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 33799 atatatacagtatatacaca 33818
>gb|AC105933.2| Homo sapiens chromosome 3 clone RP11-454I5, complete sequence Length = 175370 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 atatacaactaaaaataatatatt 177 |||||||| ||||||||||||||| Sbjct: 105029 atatacaattaaaaataatatatt 105006
>emb|AL671863.6| Mouse DNA sequence from clone RP23-88N4 on chromosome 11, complete sequence Length = 108660 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 agactaccatatagtgagaa 263 |||||||||||||||||||| Sbjct: 94459 agactaccatatagtgagaa 94478
>gb|AC129803.3| Homo sapiens 3 BAC RP11-15N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185721 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ataatatacaactaaaaata 170 |||||||||||||||||||| Sbjct: 78619 ataatatacaactaaaaata 78600
>gb|BC044605.1| Homo sapiens cDNA clone IMAGE:4824267 Length = 2234 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caaaaatgataattttcaga 322 |||||||||||||||||||| Sbjct: 163 caaaaatgataattttcaga 182
>emb|BX927282.4| Zebrafish DNA sequence from clone DKEY-49O11 in linkage group 5, complete sequence Length = 204699 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 atattaaagaaacaagtgaa 192 |||||||||||||||||||| Sbjct: 36346 atattaaagaaacaagtgaa 36365
>gb|AC107015.6| Homo sapiens 3 BAC RP11-124D9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156277 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 aaaaataatatattaaagaaacaa 187 |||||||| ||||||||||||||| Sbjct: 95385 aaaaataaaatattaaagaaacaa 95408
>gb|AC107311.8| Homo sapiens 3 BAC RP11-576M8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192233 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 157 tacaactaaaaataatatattaaagaaa 184 ||||||| | |||||||||||||||||| Sbjct: 160348 tacaactgagaataatatattaaagaaa 160321
>gb|AC108750.3| Homo sapiens 3 BAC RP11-249L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155484 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tacaactaaaaataatatattaaa 180 ||||||| |||||||||||||||| Sbjct: 22248 tacaactcaaaataatatattaaa 22225
>dbj|BS000589.1| Pan troglodytes chromosome Y clone:PTB-234J08, complete sequence Length = 179633 Score = 40.1 bits (20), Expect = 5.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 76 gaatttggaaagatatatacagtatatacaca 107 ||||||||||| ||||||||||||||||||| Sbjct: 142654 gaatttggaaat-tatatacagtatatacaca 142624
>dbj|BS000569.1| Pan troglodytes chromosome Y clone:PTFY-001L05, complete sequences Length = 39366 Score = 40.1 bits (20), Expect = 5.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 76 gaatttggaaagatatatacagtatatacaca 107 ||||||||||| ||||||||||||||||||| Sbjct: 27885 gaatttggaaat-tatatacagtatatacaca 27855
>dbj|BS000665.1| Pan troglodytes chromosome Y clone:PTB-114E01, complete sequences Length = 178566 Score = 40.1 bits (20), Expect = 5.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 76 gaatttggaaagatatatacagtatatacaca 107 ||||||||||| ||||||||||||||||||| Sbjct: 25429 gaatttggaaat-tatatacagtatatacaca 25399
>gb|AC117401.3| Homo sapiens 3 BAC RP11-521J5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 197360 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 aatatattaaagaaacaagtgaaa 193 ||||||||||||||| |||||||| Sbjct: 38952 aatatattaaagaaaaaagtgaaa 38975
>emb|CR749349.1| Homo sapiens mRNA; cDNA DKFZp781L0319 (from clone DKFZp781L0319) Length = 5099 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caaaaatgataattttcaga 322 |||||||||||||||||||| Sbjct: 3026 caaaaatgataattttcaga 3045
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 5.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 76 gaatttggaaagatatatacagtatatacaca 107 ||||||||||| ||||||||||||||||||| Sbjct: 20445243 gaatttggaaat-tatatacagtatatacaca 20445273
>emb|BX664752.20| Zebrafish DNA sequence from clone DKEYP-111E5 in linkage group 6, complete sequence Length = 156503 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tacaactaaaaataatatat 176 |||||||||||||||||||| Sbjct: 121341 tacaactaaaaataatatat 121360
>emb|CR603405.1| full-length cDNA clone CS0DI057YL24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1076 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aaaaatgctagcatgaatag 286 |||||||||||||||||||| Sbjct: 503 aaaaatgctagcatgaatag 484
>gb|AC107058.4| Homo sapiens BAC clone RP11-633G11 from 4, complete sequence Length = 126135 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 aagtgaatcaaaaagaaaat 211 |||||||||||||||||||| Sbjct: 45350 aagtgaatcaaaaagaaaat 45369
>gb|AC016644.9| Homo sapiens chromosome 5 clone RP11-52M14, complete sequence Length = 157751 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aaagtgaatcaaaaagaaaa 210 |||||||||||||||||||| Sbjct: 127097 aaagtgaatcaaaaagaaaa 127116
>gb|AC090079.6| Homo sapiens chromosome 17, clone CTD-2535P7, complete sequence Length = 200477 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tacatgaatgactcacaaaa 38 |||||||||||||||||||| Sbjct: 117439 tacatgaatgactcacaaaa 117420
>gb|AC018522.7| Homo sapiens chromosome 18, clone RP11-7N19, complete sequence Length = 169578 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 21817 atatatacagtatatacaca 21798
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cacaatacatgatacacagtgcta 406 ||||||||||||||| |||||||| Sbjct: 1492439 cacaatacatgatacccagtgcta 1492462
>gb|AC109315.3| Homo sapiens chromosome 18, clone RP11-267C16, complete sequence Length = 157966 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 90963 atatatacagtatatacaca 90982
>gb|AC023277.5| Homo sapiens BAC clone RP11-438E5 from 4, complete sequence Length = 163257 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 aaagatatatacagtatatacaca 107 ||||||||||||| |||||||||| Sbjct: 58891 aaagatatatacattatatacaca 58868
>gb|AC018362.8| Homo sapiens chromosome 15 clone RP11-265N6 map 15q15, complete sequence Length = 182288 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ccatatagtgagaaagaaaa 269 |||||||||||||||||||| Sbjct: 25409 ccatatagtgagaaagaaaa 25390
>gb|AC148317.3| Pan troglodytes BAC clone CH251-519K22 from chromosome 7, complete sequence Length = 154065 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 2393 atatatacagtatatacaca 2412
>gb|AC008937.7| Homo sapiens chromosome 5 clone CTD-2310F14, complete sequence Length = 171480 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aaagtgaatcaaaaagaaaa 210 |||||||||||||||||||| Sbjct: 86036 aaagtgaatcaaaaagaaaa 86055
>emb|BX936429.8| Zebrafish DNA sequence from clone DKEY-224E22 in linkage group 18, complete sequence Length = 158832 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 42261 atatatacagtatatacaca 42280
>gb|AC090614.5| Homo sapiens chromosome 17, clone RP11-577I13, complete sequence Length = 230956 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tacatgaatgactcacaaaa 38 |||||||||||||||||||| Sbjct: 78699 tacatgaatgactcacaaaa 78680
>emb|BX664716.19| Zebrafish DNA sequence from clone DKEY-3D4 in linkage group 9, complete sequence Length = 198430 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 131652 atatatacagtatatacaca 131671
>emb|BX511250.8| Zebrafish DNA sequence from clone CH211-57K11 in linkage group 16, complete sequence Length = 189081 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tacaactaaaaataatatat 176 |||||||||||||||||||| Sbjct: 62004 tacaactaaaaataatatat 62023
>emb|BX322541.12| Zebrafish DNA sequence from clone DKEY-78P10 in linkage group 5, complete sequence Length = 227940 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tatacagtatatacacaaac 110 |||||||||||||||||||| Sbjct: 36436 tatacagtatatacacaaac 36455
>emb|BX005462.10| Zebrafish DNA sequence from clone CH211-158D24 in linkage group 8, complete sequence Length = 175315 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 116247 atatatacagtatatacaca 116266
>emb|BX469891.9| Zebrafish DNA sequence from clone CH211-226B21 in linkage group 2, complete sequence Length = 175261 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 116298 atatatacagtatatacaca 116279
>emb|BX294435.5| Zebrafish DNA sequence from clone DKEYP-32G6 in linkage group 25, complete sequence Length = 128861 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 atcacaatacatgatacaca 400 |||||||||||||||||||| Sbjct: 42272 atcacaatacatgatacaca 42291
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tattaaagaaacaagtgaaa 193 |||||||||||||||||||| Sbjct: 34228837 tattaaagaaacaagtgaaa 34228856
>emb|BX005074.10| Zebrafish DNA sequence from clone CH211-146J7 in linkage group 8, complete sequence Length = 153989 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 47134 atatatacagtatatacaca 47115
>gb|AC020910.7| Homo sapiens chromosome 19 clone CTD-2553L13, complete sequence Length = 203201 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 caaaaatgataattttcaga 322 |||||||||||||||||||| Sbjct: 93411 caaaaatgataattttcaga 93392
>gb|AC151722.2| Pan troglodytes BAC clone CH251-580N2 from chromosome y, complete sequence Length = 182549 Score = 40.1 bits (20), Expect = 5.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 76 gaatttggaaagatatatacagtatatacaca 107 ||||||||||| ||||||||||||||||||| Sbjct: 111915 gaatttggaaat-tatatacagtatatacaca 111885
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tattaaagaaacaagtgaaa 193 |||||||||||||||||||| Sbjct: 102177 tattaaagaaacaagtgaaa 102196
>gb|AC156029.2| Mus musculus BAC clone RP23-42O8 from chromosome 5, complete sequence Length = 235471 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 78578 atatatacagtatatacaca 78559
>gb|AC040980.14| Homo sapiens chromosome 17, clone RP11-685I11, complete sequence Length = 139484 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aaaaatgctagcatgaatag 286 |||||||||||||||||||| Sbjct: 127370 aaaaatgctagcatgaatag 127351
>emb|BX276105.6| Zebrafish DNA sequence from clone CH211-194G2 in linkage group 1, complete sequence Length = 209486 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tacaactaaaaataatatat 176 |||||||||||||||||||| Sbjct: 199282 tacaactaaaaataatatat 199263
>emb|BX119902.4| Zebrafish DNA sequence from clone CH211-137I24 in linkage group 5, complete sequence Length = 170241 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 agatatatacagtatataca 105 |||||||||||||||||||| Sbjct: 23102 agatatatacagtatataca 23083
>gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome 9, complete sequence Length = 167400 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 tacatgaatgactcacaaaacaac 42 ||||||||||||||| |||||||| Sbjct: 126 tacatgaatgactcaaaaaacaac 149
>emb|BX537313.5| Zebrafish DNA sequence from clone CH211-235E18 in linkage group 2, complete sequence Length = 196642 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 107821 atatatacagtatatacaca 107840
>emb|BX005004.12| Zebrafish DNA sequence from clone DKEY-11L18, complete sequence Length = 216131 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 20632 atatatacagtatatacaca 20613
>emb|BX842667.2| Mouse DNA sequence from clone RP24-319D9 on chromosome 11, complete sequence Length = 92969 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 attaaagaaacaagtgaaagtgaa 198 |||||||||| ||||||||||||| Sbjct: 75684 attaaagaaaaaagtgaaagtgaa 75707
>emb|BX294006.4| Zebrafish DNA sequence from clone CH211-145M1 in linkage group 8, complete sequence Length = 171051 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 acaaaaggctaacattaaag 376 |||||||||||||||||||| Sbjct: 57190 acaaaaggctaacattaaag 57209
>emb|AJ292226.1|GLA292226 Garlic latent virus complete genomic RNA, isolate YH1 Length = 8363 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 acaaaacaaccgttcttataaaaa 56 ||||||||| |||||||||||||| Sbjct: 2877 acaaaacaatcgttcttataaaaa 2854
>dbj|AB005246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUP24 Length = 77999 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 attaaagaaacaagtgaaag 194 |||||||||||||||||||| Sbjct: 3578 attaaagaaacaagtgaaag 3559
>gb|AC149875.2| Xenopus tropicalis clone CH216-151P11, complete sequence Length = 155394 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aaagatatatacagtatata 103 |||||||||||||||||||| Sbjct: 18504 aaagatatatacagtatata 18485
>emb|CR936413.5| Zebrafish DNA sequence from clone CH73-108E16 in linkage group 22, complete sequence Length = 35390 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 1550 atatatacagtatatacaca 1531
>emb|BX927243.9| Zebrafish DNA sequence from clone DKEY-21E2 in linkage group 22, complete sequence Length = 227003 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 226553 atatatacagtatatacaca 226534
>emb|BX294130.5| Zebrafish DNA sequence from clone DKEY-263O22 in linkage group 19, complete sequence Length = 205973 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 115338 atatatacagtatatacaca 115319
>emb|BX255939.3| Zebrafish DNA sequence from clone DKEY-5G7 in linkage group 20, complete sequence Length = 168897 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 11627 atatatacagtatatacaca 11608
>dbj|AP005718.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-415G10, complete sequence Length = 186104 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 47731 atatatacagtatatacaca 47712
>gb|AC163725.4| Pan troglodytes BAC clone CH251-612A20 from chromosome unknown, complete sequence Length = 179999 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aaagtgaatcaaaaagaaaa 210 |||||||||||||||||||| Sbjct: 90547 aaagtgaatcaaaaagaaaa 90566
>emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in linkage group 11, complete sequence Length = 220631 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 216378 atatatacagtatatacaca 216359
>dbj|AP001770.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-27I22, complete sequence Length = 73589 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 21044 atatatacagtatatacaca 21025
>dbj|AP000838.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-21A6, complete sequence Length = 109666 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 94848 atatatacagtatatacaca 94829
>emb|BX005103.4| Zebrafish DNA sequence from clone CH211-149O7 in linkage group 25, complete sequence Length = 150295 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 atcacaatacatgatacaca 400 |||||||||||||||||||| Sbjct: 95281 atcacaatacatgatacaca 95262
>gb|AC174450.2| Mus musculus BAC clone RP23-116E13 from chromosome 13, complete sequence Length = 200641 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 196155 atatatacagtatatacaca 196174
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 4172471 atatatacagtatatacaca 4172490
>ref|NM_001002912.3| Homo sapiens chromosome 1 open reading frame 173 (C1orf173), mRNA Length = 7165 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caaaaatgataattttcaga 322 |||||||||||||||||||| Sbjct: 5103 caaaaatgataattttcaga 5122
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 3996032 atatatacagtatatacaca 3996051
>emb|BX470255.18| Zebrafish DNA sequence from clone DKEY-76A14 in linkage group 1, complete sequence Length = 203708 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 atatacagtatatacacaaa 109 |||||||||||||||||||| Sbjct: 93653 atatacagtatatacacaaa 93634
>ref|NM_007292.4| Homo sapiens acyl-Coenzyme A oxidase 1, palmitoyl (ACOX1), transcript variant 2, mRNA Length = 7514 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aaaaatgctagcatgaatag 286 |||||||||||||||||||| Sbjct: 2872 aaaaatgctagcatgaatag 2853
>ref|NM_004035.5| Homo sapiens acyl-Coenzyme A oxidase 1, palmitoyl (ACOX1), transcript variant 1, mRNA Length = 7514 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aaaaatgctagcatgaatag 286 |||||||||||||||||||| Sbjct: 2872 aaaaatgctagcatgaatag 2853
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 attcccttatccaatgacac 229 |||||||||||||||||||| Sbjct: 7213067 attcccttatccaatgacac 7213048
>gb|AF034788.1|AF034788 Methanococcus maripaludis formate hydrogenlyase subunit 7 (fhl7) gene, complete cds Length = 1512 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 catatagtgagaaagaaaaaatgc 274 ||||| |||||||||||||||||| Sbjct: 733 catatcgtgagaaagaaaaaatgc 710
>emb|AL805960.10| Mouse DNA sequence from clone RP23-20P17 on chromosome X, complete sequence Length = 172780 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 actaaaaataatatattaaa 180 |||||||||||||||||||| Sbjct: 75060 actaaaaataatatattaaa 75041
>gb|U82828.1|HSU82828 Homo sapiens ataxia telangiectasia (ATM) gene, complete cds Length = 184490 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 159476 atatatacagtatatacaca 159457
>gb|AC001642.1|HSAC001642 Human Chromosome 11 cosmid cSRL7f12, complete sequence Length = 38528 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 atatatacagtatatacaca 107 |||||||||||||||||||| Sbjct: 33192 atatatacagtatatacaca 33173
>dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP13-259F12, complete sequence Length = 167444 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ccaaaaatgataattttcag 321 |||||||||||||||||||| Sbjct: 77719 ccaaaaatgataattttcag 77700
>dbj|AP006689.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT27F14, TM0387, complete sequence Length = 96031 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 tgaatcaaaaagaaaattccctta 218 ||||||||||||||||||| |||| Sbjct: 29083 tgaatcaaaaagaaaattctctta 29106
>emb|AL772189.7| Zebrafish DNA sequence from clone CH211-135B6 in linkage group 17, complete sequence Length = 183958 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tacaactaaaaataatatat 176 |||||||||||||||||||| Sbjct: 146342 tacaactaaaaataatatat 146323
>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X, complete sequence Length = 179534 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 atagtgagaaagaaaaaatg 273 |||||||||||||||||||| Sbjct: 88344 atagtgagaaagaaaaaatg 88363
>gb|AC168046.7| Mus musculus chromosome 8, clone RP24-335A7, complete sequence Length = 160659 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 atatattaaagaaacaagtgaaag 194 ||||||||||||||| |||||||| Sbjct: 14745 atatattaaagaaactagtgaaag 14722
>emb|AL833250.1|HSM804563 Homo sapiens mRNA; cDNA DKFZp761G1720 (from clone DKFZp761G1720) Length = 2473 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caaaaatgataattttcaga 322 |||||||||||||||||||| Sbjct: 411 caaaaatgataattttcaga 430
>emb|AL834414.1|HSM805498 Homo sapiens mRNA; cDNA DKFZp547I048 (from clone DKFZp547I048) Length = 4362 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caaaaatgataattttcaga 322 |||||||||||||||||||| Sbjct: 2170 caaaaatgataattttcaga 2189 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,624,545 Number of Sequences: 3902068 Number of extensions: 6624545 Number of successful extensions: 154559 Number of sequences better than 10.0: 157 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 153468 Number of HSP's gapped (non-prelim): 1098 length of query: 423 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 401 effective length of database: 17,147,199,772 effective search space: 6876027108572 effective search space used: 6876027108572 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
