ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21l24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009548.1| Triticum aestivum clone wr1.pk151.f8:fis, full in... 313 3e-82
2gb|AY104216.1| Zea mays PCO109946 mRNA sequence 206 5e-50
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
4dbj|AK058994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 174 2e-40
6emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220... 174 2e-40
7dbj|AK071066.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 4e-38
8dbj|AK058700.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
9gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 76 1e-10
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 76 1e-10
12gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 46 0.098
13emb|CT025626.11| Mouse DNA sequence from clone RP24-141G14 on ch... 46 0.098
14gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's H... 44 0.39
15gb|AC158534.2| Mus musculus BAC clone RP23-32O6 from chromosome ... 44 0.39
16gb|AC131791.4| Mus musculus BAC clone RP24-462N24 from chromosom... 44 0.39
17gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 42 1.5
18gb|AC159454.1| Trypanosoma brucei chromosome 7 clone RPCI93-6C8,... 42 1.5
19gb|AC159429.1| Trypanosoma brucei chromosome 7 clone RPCI93-28B1... 42 1.5
20emb|AL080314.29|HSDJ60O19 Human DNA sequence from clone RP1-60O1... 42 1.5
21gb|AC122180.9| Mus musculus chromosome 7, clone RP24-296E5, comp... 42 1.5
22gb|AC134536.5| Mus musculus BAC clone RP24-386B19 from 7, comple... 42 1.5
23gb|AC167232.5| Mus musculus BAC RP24-496C19 (Roswell Park Cance... 40 6.0
24gb|AC127348.4| Mus musculus BAC clone RP23-57D10 from chromosome... 40 6.0
25gb|AC160114.2| Mus musculus BAC clone RP24-70J8 from chromosome ... 40 6.0
26gb|AC115294.5| Mus musculus BAC clone RP23-97A19 from chromosome... 40 6.0
27emb|AL590311.5| Human DNA sequence from clone RP11-20F16 on chro... 40 6.0
28emb|AL354682.22| Human DNA sequence from clone RP11-282L14 on ch... 40 6.0
29emb|CR927553.8| Zebrafish DNA sequence from clone DKEY-206P8 in ... 40 6.0
30gb|AC113298.14| Mus musculus chromosome 7, clone RP23-428N8, com... 40 6.0
31dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 6.0
32gb|AC092752.2| Genomic sequence for Mus musculus, clone RP23-51O... 40 6.0
33dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.0
34gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, c... 40 6.0
35dbj|AP004609.1| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.0
36dbj|AP002954.1| Homo sapiens genomic DNA, chromosome 11q, clons:... 40 6.0
37emb|AL772216.15| Mouse DNA sequence from clone RP23-153M22 on ch... 40 6.0
38gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complet... 40 6.0
39gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, compl... 40 6.0
40emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on ch... 40 6.0
41emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chro... 40 6.0 
>gb|BT009548.1| Triticum aestivum clone wr1.pk151.f8:fis, full insert mRNA sequence
          Length = 779

 Score =  313 bits (158), Expect = 3e-82
 Identities = 179/186 (96%)
 Strand = Plus / Minus

                                                                       
Query: 262 ttagatacccttctccagcatcgcgcggacccgggtggggaggccgtacagcctgatgaa 321
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttagatgcccttctccagcatcgcgcggacccgggtggggaggccgtacagcctgatgaa 495

                                                                       
Query: 322 accttcagcatcagcctggtcatatatctccccgttttcgaacgatgagatgtcctccct 381
           ||| ||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 494 accctcagcgtcagcctggtcatagatctccccgttctcgaacgacgagatgtcctccct 435

                                                                       
Query: 382 gtacaggctgtaggggctcttccgggacgcgacggtcaccgagcccttgtacagcttcag 441
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 434 gtacaggctgtaggggctcttccgggacgcgacggtcaccgaccccttgtacagcttcag 375

                 
Query: 442 ggtcac 447
           ||||||
Sbjct: 374 ggtcac 369
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>gb|AY104216.1| Zea mays PCO109946 mRNA sequence
          Length = 1750

 Score =  206 bits (104), Expect = 5e-50
 Identities = 164/184 (89%)
 Strand = Plus / Minus

                                                                        
Query: 264  agatacccttctccagcatcgcgcggacccgggtggggaggccgtacagcctgatgaaac 323
            |||||||||||||||||||||| |||||||| || || |||||||||||||||||||| |
Sbjct: 1538 agatacccttctccagcatcgcccggacccgtgtcggtaggccgtacagcctgatgaacc 1479

                                                                        
Query: 324  cttcagcatcagcctggtcatatatctccccgttttcgaacgatgagatgtcctccctgt 383
            | || || ||||| ||||  || ||||||||||| || ||||| ||||| || |||||||
Sbjct: 1478 cctcggcgtcagcttggttgtagatctccccgttctcaaacgaggagatatcttccctgt 1419

                                                                        
Query: 384  acaggctgtaggggctcttccgggacgcgacggtcaccgagcccttgtacagcttcaggg 443
            |||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||
Sbjct: 1418 acaggctgtaggggctcttccgggacgcgacgttcacggaacccttgtacagcttcaggg 1359

                
Query: 444  tcac 447
            ||||
Sbjct: 1358 tcac 1355
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  174 bits (88), Expect = 2e-40
 Identities = 163/188 (86%)
 Strand = Plus / Minus

                                                                           
Query: 261     cttagatacccttctccagcatcgcgcggacccgggtggggaggccgtacagcctgatga 320
               ||||||| |||||||||||||| || ||||| | ||| ||||| || || ||||||||||
Sbjct: 7433445 cttagatgcccttctccagcattgcccggactctggtagggagaccatatagcctgatga 7433386

                                                                           
Query: 321     aaccttcagcatcagcctggtcatatatctccccgttttcgaacgatgagatgtcctccc 380
               | |||||||||||||||||||  || |||||||| || || || || |||||||| ||||
Sbjct: 7433385 acccttcagcatcagcctggttgtagatctccccattctcaaatgaggagatgtcttccc 7433326

                                                                           
Query: 381     tgtacaggctgtaggggctcttccgggacgcgacggtcaccgagcccttgtacagcttca 440
               ||||||||||||| ||||||||||||||||||||| | || ||||||||||||||||| |
Sbjct: 7433325 tgtacaggctgtatgggctcttccgggacgcgacgtttacggagcccttgtacagcttga 7433266

                       
Query: 441     gggtcacg 448
               | ||||||
Sbjct: 7433265 gagtcacg 7433258
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>dbj|AK058994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F12, full
            insert sequence
          Length = 1290

 Score =  174 bits (88), Expect = 2e-40
 Identities = 163/188 (86%)
 Strand = Plus / Minus

                                                                        
Query: 261  cttagatacccttctccagcatcgcgcggacccgggtggggaggccgtacagcctgatga 320
            ||||||| |||||||||||||| || ||||| | ||| ||||| || || ||||||||||
Sbjct: 1055 cttagatgcccttctccagcattgcccggactctggtagggagaccatatagcctgatga 996

                                                                        
Query: 321  aaccttcagcatcagcctggtcatatatctccccgttttcgaacgatgagatgtcctccc 380
            | |||||||||||||||||||  || |||||||| || || || || |||||||| ||||
Sbjct: 995  acccttcagcatcagcctggttgtagatctccccattctcaaatgaggagatgtcttccc 936

                                                                        
Query: 381  tgtacaggctgtaggggctcttccgggacgcgacggtcaccgagcccttgtacagcttca 440
            ||||||||||||| ||||||||||||||||||||| | || ||||||||||||||||| |
Sbjct: 935  tgtacaggctgtatgggctcttccgggacgcgacgtttacggagcccttgtacagcttga 876

                    
Query: 441  gggtcacg 448
            | ||||||
Sbjct: 875  gagtcacg 868
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  174 bits (88), Expect = 2e-40
 Identities = 163/188 (86%)
 Strand = Plus / Minus

                                                                           
Query: 261     cttagatacccttctccagcatcgcgcggacccgggtggggaggccgtacagcctgatga 320
               ||||||| |||||||||||||| || ||||| | ||| ||||| || || ||||||||||
Sbjct: 7433324 cttagatgcccttctccagcattgcccggactctggtagggagaccatatagcctgatga 7433265

                                                                           
Query: 321     aaccttcagcatcagcctggtcatatatctccccgttttcgaacgatgagatgtcctccc 380
               | |||||||||||||||||||  || |||||||| || || || || |||||||| ||||
Sbjct: 7433264 acccttcagcatcagcctggttgtagatctccccattctcaaatgaggagatgtcttccc 7433205

                                                                           
Query: 381     tgtacaggctgtaggggctcttccgggacgcgacggtcaccgagcccttgtacagcttca 440
               ||||||||||||| ||||||||||||||||||||| | || ||||||||||||||||| |
Sbjct: 7433204 tgtacaggctgtatgggctcttccgggacgcgacgtttacggagcccttgtacagcttga 7433145

                       
Query: 441     gggtcacg 448
               | ||||||
Sbjct: 7433144 gagtcacg 7433137
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>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 98782

 Score =  174 bits (88), Expect = 2e-40
 Identities = 163/188 (86%)
 Strand = Plus / Minus

                                                                         
Query: 261   cttagatacccttctccagcatcgcgcggacccgggtggggaggccgtacagcctgatga 320
             ||||||| |||||||||||||| || ||||| | ||| ||||| || || ||||||||||
Sbjct: 23121 cttagatgcccttctccagcattgcccggactctggtagggagaccatatagcctgatga 23062

                                                                         
Query: 321   aaccttcagcatcagcctggtcatatatctccccgttttcgaacgatgagatgtcctccc 380
             | |||||||||||||||||||  || |||||||| || || || || |||||||| ||||
Sbjct: 23061 acccttcagcatcagcctggttgtagatctccccattctcaaatgaggagatgtcttccc 23002

                                                                         
Query: 381   tgtacaggctgtaggggctcttccgggacgcgacggtcaccgagcccttgtacagcttca 440
             ||||||||||||| ||||||||||||||||||||| | || ||||||||||||||||| |
Sbjct: 23001 tgtacaggctgtatgggctcttccgggacgcgacgtttacggagcccttgtacagcttga 22942

                     
Query: 441   gggtcacg 448
             | ||||||
Sbjct: 22941 gagtcacg 22934
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>dbj|AK071066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081B09, full
            insert sequence
          Length = 1752

 Score =  167 bits (84), Expect = 4e-38
 Identities = 162/188 (86%)
 Strand = Plus / Minus

                                                                        
Query: 261  cttagatacccttctccagcatcgcgcggacccgggtggggaggccgtacagcctgatga 320
            ||||||| |||||||||||||| || ||||| | ||| ||||| || || ||||||||||
Sbjct: 1496 cttagatgcccttctccagcattgcccggactctggtagggagaccatatagcctgatga 1437

                                                                        
Query: 321  aaccttcagcatcagcctggtcatatatctccccgttttcgaacgatgagatgtcctccc 380
            | |||||||||||||||||||  || |||||||| || || || || |||||||| ||||
Sbjct: 1436 acccttcagcatcagcctggttgtagatctccccattctcaaatgaggagatgtcttccc 1377

                                                                        
Query: 381  tgtacaggctgtaggggctcttccgggacgcgacggtcaccgagcccttgtacagcttca 440
            ||||||||||||| |||| |||||||||||||||| | || ||||||||||||||||| |
Sbjct: 1376 tgtacaggctgtatgggcccttccgggacgcgacgtttacggagcccttgtacagcttga 1317

                    
Query: 441  gggtcacg 448
            | ||||||
Sbjct: 1316 gagtcacg 1309
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>dbj|AK058700.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C03, full
           insert sequence
          Length = 338

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 97/115 (84%)
 Strand = Plus / Minus

                                                                       
Query: 261 cttagatacccttctccagcatcgcgcggacccgggtggggaggccgtacagcctgatga 320
           ||||||| |||||||||||||| || ||||| | ||| ||||| || || ||||||||||
Sbjct: 117 cttagatgcccttctccagcattgcccggactctggtagggagaccatatagcctgatga 58

                                                                  
Query: 321 aaccttcagcatcagcctggtcatatatctccccgttttcgaacgatgagatgtc 375
           | |||||||||||||||||||  || |||||||| || || || || ||||||||
Sbjct: 57  acccttcagcatcagcctggttgtagatctccccattctcaaatgaggagatgtc 3
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>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0015P05 map C53961S, complete sequence
          Length = 175121

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                         
Query: 335   gcctggtcatatatctccccgttttcgaacgatgagatgtcctccctgtacaggctgtag 394
             ||||||| ||||||||  || || |||||||| || |||||||||| ||||||| |||||
Sbjct: 77658 gcctggttatatatctttccattctcgaacgaggaaatgtcctccccgtacaggatgtag 77599

                           
Query: 395   gggctcttccggga 408
             ||||||||||||||
Sbjct: 77598 gggctcttccggga 77585



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                   
Query: 371   atgtcctccctgtacaggctgtaggggctcttccggga 408
             |||||||||| |||||||||||||||||||||||||||
Sbjct: 77272 atgtcctccccgtacaggctgtaggggctcttccggga 77235
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                            
Query: 335      gcctggtcatatatctccccgttttcgaacgatgagatgtcctccctgtacaggctgtag 394
                ||||||| ||||||||  || || |||||||| || |||||||||| ||||||| |||||
Sbjct: 11291300 gcctggttatatatctttccattctcgaacgaggaaatgtcctccccgtacaggatgtag 11291241

                              
Query: 395      gggctcttccggga 408
                ||||||||||||||
Sbjct: 11291240 gggctcttccggga 11291227



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                      
Query: 371      atgtcctccctgtacaggctgtaggggctcttccggga 408
                |||||||||| |||||||||||||||||||||||||||
Sbjct: 11290914 atgtcctccccgtacaggctgtaggggctcttccggga 11290877
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                            
Query: 335      gcctggtcatatatctccccgttttcgaacgatgagatgtcctccctgtacaggctgtag 394
                ||||||| ||||||||  || || |||||||| || |||||||||| ||||||| |||||
Sbjct: 11370489 gcctggttatatatctttccattctcgaacgaggaaatgtcctccccgtacaggatgtag 11370430

                              
Query: 395      gggctcttccggga 408
                ||||||||||||||
Sbjct: 11370429 gggctcttccggga 11370416



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                      
Query: 371      atgtcctccctgtacaggctgtaggggctcttccggga 408
                |||||||||| |||||||||||||||||||||||||||
Sbjct: 11370103 atgtcctccccgtacaggctgtaggggctcttccggga 11370066
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 39      acaaggactgcaccgcagcacca 61
               |||||||||||||||||||||||
Sbjct: 2274114 acaaggactgcaccgcagcacca 2274136
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>emb|CT025626.11| Mouse DNA sequence from clone RP24-141G14 on chromosome 14, complete
            sequence
          Length = 201441

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 99   atacacatatccacgcacaccaggatg 125
            |||||| ||||||||||||||||||||
Sbjct: 8522 atacacctatccacgcacaccaggatg 8548
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>gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 213379

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 31     gcaatgagacaaggactgcacc 52
              ||||||||||||||||||||||
Sbjct: 114727 gcaatgagacaaggactgcacc 114706
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>gb|AC158534.2| Mus musculus BAC clone RP23-32O6 from chromosome 7, complete sequence
          Length = 242359

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 120    aggatgaaacaaaacaaaaact 141
              ||||||||||||||||||||||
Sbjct: 114228 aggatgaaacaaaacaaaaact 114249
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>gb|AC131791.4| Mus musculus BAC clone RP24-462N24 from chromosome 7, complete sequence
          Length = 178072

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 120    aggatgaaacaaaacaaaaact 141
              ||||||||||||||||||||||
Sbjct: 130887 aggatgaaacaaaacaaaaact 130908
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>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 316    gatgaaaccttcagcatcagc 336
              |||||||||||||||||||||
Sbjct: 900868 gatgaaaccttcagcatcagc 900888
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>gb|AC159454.1| Trypanosoma brucei chromosome 7 clone RPCI93-6C8, complete sequence
          Length = 150601

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 316    gatgaaaccttcagcatcagc 336
              |||||||||||||||||||||
Sbjct: 138996 gatgaaaccttcagcatcagc 138976
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>gb|AC159429.1| Trypanosoma brucei chromosome 7 clone RPCI93-28B13, complete sequence
          Length = 152128

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 316   gatgaaaccttcagcatcagc 336
             |||||||||||||||||||||
Sbjct: 92009 gatgaaaccttcagcatcagc 91989
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>emb|AL080314.29|HSDJ60O19 Human DNA sequence from clone RP1-60O19 on chromosome 6q16.2-21 Contains
              two novel genes (including FLJ22314), complete sequence
          Length = 161355

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 122    gatgaaacaaaacaaaaactc 142
              |||||||||||||||||||||
Sbjct: 102740 gatgaaacaaaacaaaaactc 102760
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>gb|AC122180.9| Mus musculus chromosome 7, clone RP24-296E5, complete sequence
          Length = 167791

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 123   atgaaacaaaacaaaaactcg 143
             |||||||||||||||||||||
Sbjct: 18604 atgaaacaaaacaaaaactcg 18584
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>gb|AC134536.5| Mus musculus BAC clone RP24-386B19 from 7, complete sequence
          Length = 163463

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   atgaaacaaaacaaaaactcg 143
             |||||||||||||||||||||
Sbjct: 95063 atgaaacaaaacaaaaactcg 95083
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>gb|AC167232.5| Mus musculus  BAC RP24-496C19 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 174683

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    tcctccctgtacaggctgta 393
              ||||||||||||||||||||
Sbjct: 105277 tcctccctgtacaggctgta 105258
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>gb|AC127348.4| Mus musculus BAC clone RP23-57D10 from chromosome 7, complete sequence
          Length = 229190

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    gactgcaccgcagcaccaca 63
             ||||||||||||||||||||
Sbjct: 40960 gactgcaccgcagcaccaca 40979
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>gb|AC160114.2| Mus musculus BAC clone RP24-70J8 from chromosome 13, complete sequence
          Length = 237699

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   ccaggatgaaacaaaacaaa 137
             ||||||||||||||||||||
Sbjct: 22042 ccaggatgaaacaaaacaaa 22061
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>gb|AC115294.5| Mus musculus BAC clone RP23-97A19 from chromosome 3, complete sequence
          Length = 149451

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   atgaaacaaaacaaaaactc 142
             ||||||||||||||||||||
Sbjct: 56708 atgaaacaaaacaaaaactc 56727
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>emb|AL590311.5| Human DNA sequence from clone RP11-20F16 on chromosome 9 Contains the
             5' end of the GDA gene for guanine deaminase and a CpG
             island, complete sequence
          Length = 131933

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   atgaaacaaaacaaaaactc 142
             ||||||||||||||||||||
Sbjct: 61658 atgaaacaaaacaaaaactc 61639
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>emb|AL354682.22| Human DNA sequence from clone RP11-282L14 on chromosome 9, complete
             sequence
          Length = 108785

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   tgaaatcactagaaaataca 185
             ||||||||||||||||||||
Sbjct: 29483 tgaaatcactagaaaataca 29502
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>emb|CR927553.8| Zebrafish DNA sequence from clone DKEY-206P8 in linkage group 17,
              complete sequence
          Length = 162064

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    agcctggtcatatatctccc 353
              ||||||||||||||||||||
Sbjct: 128531 agcctggtcatatatctccc 128512
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>gb|AC113298.14| Mus musculus chromosome 7, clone RP23-428N8, complete sequence
          Length = 181555

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 176    agaaaatacactcntttgttccc 198
              ||||||||||||| |||||||||
Sbjct: 106552 agaaaatacactcttttgttccc 106574
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>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 225     aaaacagaatattttattcc 244
               ||||||||||||||||||||
Sbjct: 1864499 aaaacagaatattttattcc 1864518
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>gb|AC092752.2| Genomic sequence for Mus musculus, clone RP23-51O3, complete sequence
          Length = 226416

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   caggatgaaacaaaacaaaa 138
             ||||||||||||||||||||
Sbjct: 31058 caggatgaaacaaaacaaaa 31077
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>dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21C13
          Length = 75709

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aaacaaaacaaaaactcgacaaag 149
             |||||||||||||||| |||||||
Sbjct: 31768 aaacaaaacaaaaactagacaaag 31745
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>gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, complete sequence
          Length = 197585

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   gatgaaacaaaacaaaaact 141
             ||||||||||||||||||||
Sbjct: 88276 gatgaaacaaaacaaaaact 88257
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>dbj|AP004609.1| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-158I9, complete
             sequence
          Length = 195409

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   atgaaacaaaacaaaaactc 142
             ||||||||||||||||||||
Sbjct: 20953 atgaaacaaaacaaaaactc 20934
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>dbj|AP002954.1| Homo sapiens genomic DNA, chromosome 11q, clons:CTC-89C10, complete
              sequence
          Length = 197215

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    atgaaacaaaacaaaaactc 142
              ||||||||||||||||||||
Sbjct: 182362 atgaaacaaaacaaaaactc 182343
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>emb|AL772216.15| Mouse DNA sequence from clone RP23-153M22 on chromosome 2, complete
             sequence
          Length = 212233

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aaacaaaacaaaaactcgacaaag 149
             |||||||||||||||| |||||||
Sbjct: 25855 aaacaaaacaaaaacttgacaaag 25832
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>gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complete sequence
          Length = 217353

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    gactgcaccgcagcaccaca 63
             ||||||||||||||||||||
Sbjct: 83957 gactgcaccgcagcaccaca 83938
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>gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, complete sequence
          Length = 228741

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   gatgaaacaaaacaaaaact 141
             ||||||||||||||||||||
Sbjct: 81227 gatgaaacaaaacaaaaact 81208
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>emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on chromosome 2, complete
             sequence
          Length = 241418

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   atgaaacaaaacaaaaactc 142
             ||||||||||||||||||||
Sbjct: 35442 atgaaacaaaacaaaaactc 35423
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>emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chromosome 2, complete
              sequence
          Length = 193932

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    atgaaacaaaacaaaaactc 142
              ||||||||||||||||||||
Sbjct: 107052 atgaaacaaaacaaaaactc 107071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,907,752
Number of Sequences: 3902068
Number of extensions: 4907752
Number of successful extensions: 238176
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 237893
Number of HSP's gapped (non-prelim): 283
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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