| Clone Name | rbags21l19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | THIK2_ARATH (Q56WD9) 3-ketoacyl-CoA thiolase 2, peroxisomal prec... | 42 | 5e-04 | 2 | THIK5_ARATH (Q570C8) 3-ketoacyl-CoA thiolase 5, peroxisomal prec... | 40 | 0.001 | 3 | THIK1_ARATH (Q8LF48) 3-ketoacyl-CoA thiolase 1, peroxisomal prec... | 37 | 0.016 | 4 | BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9) | 30 | 1.9 | 5 | ATG11_PICPA (Q9C438) Autophagy-related protein 11 (Glucose-induc... | 28 | 7.3 |
|---|
>THIK2_ARATH (Q56WD9) 3-ketoacyl-CoA thiolase 2, peroxisomal precursor (EC| 2.3.1.16) (Beta-ketothiolase 2) (Acetyl-CoA acyltransferase 2) (Peroxisomal 3-oxoacyl-CoA thiolase 2) (Peroxisome defective protein 1) Length = 462 Score = 42.0 bits (97), Expect = 5e-04 Identities = 20/26 (76%), Positives = 21/26 (80%) Frame = -2 Query: 98 IGSGXGAAXVFERGDAVDELTNARGV 21 IG+G GAA VFERGD VDEL NAR V Sbjct: 426 IGTGMGAAAVFERGDGVDELRNARKV 451
>THIK5_ARATH (Q570C8) 3-ketoacyl-CoA thiolase 5, peroxisomal precursor (EC| 2.3.1.16) (Beta-ketothiolase 5) (Acetyl-CoA acyltransferase 5) (Peroxisomal 3-oxoacyl-CoA thiolase 5) Length = 457 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = -2 Query: 98 IGSGXGAAXVFERGDAVDELTNAR 27 IG+G GAA VFERGD+VD L+NAR Sbjct: 427 IGTGMGAAAVFERGDSVDNLSNAR 450
>THIK1_ARATH (Q8LF48) 3-ketoacyl-CoA thiolase 1, peroxisomal precursor (EC| 2.3.1.16) (Beta-ketothiolase 1) (Acetyl-CoA acyltransferase 1) (Peroxisomal 3-oxoacyl-CoA thiolase 1) Length = 443 Score = 37.0 bits (84), Expect = 0.016 Identities = 18/26 (69%), Positives = 19/26 (73%) Frame = -2 Query: 98 IGSGXGAAXVFERGDAVDELTNARGV 21 IGSG GAA VFERG VDEL + R V Sbjct: 418 IGSGMGAAAVFERGGGVDELCDVRKV 443
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 30.0 bits (66), Expect = 1.9 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%) Frame = +1 Query: 1 KSQLSEGTPRAFVSSSTASPRSKTXA---APXPEPM 99 KSQ S+ TP + S+ +PRS T + P PEP+ Sbjct: 132 KSQESQHTPHSMTPSTATAPRSSTPSHGQTPAPEPI 167
>ATG11_PICPA (Q9C438) Autophagy-related protein 11 (Glucose-induced selective| autophagy protein 9) (Pexophagy zeocin-resistant mutant protein 6) (Fragment) Length = 1313 Score = 28.1 bits (61), Expect = 7.3 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 Query: 14 ARAPLGHSSAHPPHLHARKRXLH 82 +RAP HPPHL+A + LH Sbjct: 571 SRAPTPEHDPHPPHLNAINKLLH 593 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.299 0.112 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,846,436 Number of Sequences: 219361 Number of extensions: 151417 Number of successful extensions: 346 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 340 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 346 length of database: 80,573,946 effective HSP length: 8 effective length of database: 78,819,058 effective search space used: 1891657392 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.7 bits)