| Clone Name | rbags21l19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196831.1| Oryza sativa (japonica cultivar-group) putative thiolase (OSJNBa0018F16.7), mRNA Length = 1778 Score = 40.1 bits (20), Expect = 1.1 Identities = 56/69 (81%) Strand = Plus / Minus Query: 31 gcattcgtcagctcatccaccgcatctccacgctcgaaaacggnggctgcacccanncca 90 ||||| || ||||||||||| ||||| |||||||| || || | || || |||| ||| Sbjct: 1421 gcattagtgagctcatccactgcatccccacgctcaaagacagcagcagcccccatgcca 1362 Query: 91 gaacctatg 99 ||||||||| Sbjct: 1361 gaacctatg 1353
>dbj|AK072460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121H13, full insert sequence Length = 1808 Score = 40.1 bits (20), Expect = 1.1 Identities = 56/69 (81%) Strand = Plus / Minus Query: 31 gcattcgtcagctcatccaccgcatctccacgctcgaaaacggnggctgcacccanncca 90 ||||| || ||||||||||| ||||| |||||||| || || | || || |||| ||| Sbjct: 1571 gcattagtgagctcatccactgcatccccacgctcaaagacagcagcagcccccatgcca 1512 Query: 91 gaacctatg 99 ||||||||| Sbjct: 1511 gaacctatg 1503
>ref|XM_754014.1| Ustilago maydis 521 hypothetical protein (UM02960.1) partial mRNA Length = 1761 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 catccaccgcatctccacg 62 ||||||||||||||||||| Sbjct: 84 catccaccgcatctccacg 102
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 38.2 bits (19), Expect = 4.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 31 gcattcgtcagctcatccaccgcatctccacgctc 65 ||||| || ||||||||||| ||||| |||||||| Sbjct: 144023 gcattagtgagctcatccactgcatccccacgctc 143989
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 38.2 bits (19), Expect = 4.4 Identities = 31/35 (88%) Strand = Plus / Plus Query: 31 gcattcgtcagctcatccaccgcatctccacgctc 65 ||||| || ||||||||||| ||||| |||||||| Sbjct: 92949 gcattagtgagctcatccactgcatccccacgctc 92983
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 4.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 31 gcattcgtcagctcatccaccgcatctccacgctc 65 ||||| || ||||||||||| ||||| |||||||| Sbjct: 16265134 gcattagtgagctcatccactgcatccccacgctc 16265100
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 4.4 Identities = 31/35 (88%) Strand = Plus / Minus Query: 31 gcattcgtcagctcatccaccgcatctccacgctc 65 ||||| || ||||||||||| ||||| |||||||| Sbjct: 16273375 gcattagtgagctcatccactgcatccccacgctc 16273341 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 273,266 Number of Sequences: 3902068 Number of extensions: 273266 Number of successful extensions: 15324 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 15291 Number of HSP's gapped (non-prelim): 33 length of query: 99 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 78 effective length of database: 17,151,101,840 effective search space: 1337785943520 effective search space used: 1337785943520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)