>ref|XM_470445.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1077

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                        
Query: 330  cctccagcttcttgcggaacttcgggatcacgtcggctttgacgcacatcaccaggccca 389
            |||||| |||||| ||||||||||| ||  | || |||||||||  |||||| | |||||
Sbjct: 1060 cctccaacttctttcggaacttcggaattgcttcagctttgacggccatcactaagccca 1001

                                                                        
Query: 390  tctccttgtagttcttcagctcttgctgtgccgactgttcggcgcgaattgggaaagtaa 449
            |||||||||| ||||||| ||||||||| ||||| ||||| |  || ||||||||||| |
Sbjct: 1000 tctccttgtaattcttcatctcttgctgagccgattgttcagaacgtattgggaaagtga 941

                   
Query: 450  atgacca 456
            | |||||
Sbjct: 940  acgacca 934

>ref|XM_470446.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1612

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                        
Query: 330  cctccagcttcttgcggaacttcgggatcacgtcggctttgacgcacatcaccaggccca 389
            |||||| |||||| ||||||||||| ||  | || |||||||||  |||||| | |||||
Sbjct: 1344 cctccaacttctttcggaacttcggaattgcttcagctttgacggccatcactaagccca 1285

                                                                        
Query: 390  tctccttgtagttcttcagctcttgctgtgccgactgttcggcgcgaattgggaaagtaa 449
            |||||||||| ||||||| ||||||||| ||||| ||||| |  || ||||||||||| |
Sbjct: 1284 tctccttgtaattcttcatctcttgctgagccgattgttcagaacgtattgggaaagtga 1225

                   
Query: 450  atgacca 456
            | |||||
Sbjct: 1224 acgacca 1218

>dbj|AK103879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149N19, full
            insert sequence
          Length = 1364

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                        
Query: 330  cctccagcttcttgcggaacttcgggatcacgtcggctttgacgcacatcaccaggccca 389
            |||||| |||||| ||||||||||| ||  | || |||||||||  |||||| | |||||
Sbjct: 1098 cctccaacttctttcggaacttcggaattgcttcagctttgacggccatcactaagccca 1039

                                                                        
Query: 390  tctccttgtagttcttcagctcttgctgtgccgactgttcggcgcgaattgggaaagtaa 449
            |||||||||| ||||||| ||||||||| ||||| ||||| |  || ||||||||||| |
Sbjct: 1038 tctccttgtaattcttcatctcttgctgagccgattgttcagaacgtattgggaaagtga 979

                   
Query: 450  atgacca 456
            | |||||
Sbjct: 978  acgacca 972

>dbj|AK064339.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H02, full
            insert sequence
          Length = 1376

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                        
Query: 330  cctccagcttcttgcggaacttcgggatcacgtcggctttgacgcacatcaccaggccca 389
            |||||| |||||| ||||||||||| ||  | || |||||||||  |||||| | |||||
Sbjct: 1108 cctccaacttctttcggaacttcggaattgcttcagctttgacggccatcactaagccca 1049

                                                                        
Query: 390  tctccttgtagttcttcagctcttgctgtgccgactgttcggcgcgaattgggaaagtaa 449
            |||||||||| ||||||| ||||||||| ||||| ||||| |  || ||||||||||| |
Sbjct: 1048 tctccttgtaattcttcatctcttgctgagccgattgttcagaacgtattgggaaagtga 989

                   
Query: 450  atgacca 456
            | |||||
Sbjct: 988  acgacca 982

>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08
             map S15179S, complete sequence
          Length = 166005

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                         
Query: 330   cctccagcttcttgcggaacttcgggatcacgtcggctttgacgcacatcaccaggccca 389
             |||||| |||||| ||||||||||| ||  | || |||||||||  |||||| | |||||
Sbjct: 64950 cctccaacttctttcggaacttcggaattgcttcagctttgacggccatcactaagccca 65009

                               
Query: 390   tctccttgtagttcttca 407
             |||||||||| |||||||
Sbjct: 65010 tctccttgtaattcttca 65027

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                            
Query: 330      cctccagcttcttgcggaacttcgggatcacgtcggctttgacgcacatcaccaggccca 389
                |||||| |||||| ||||||||||| ||  | || |||||||||  |||||| | |||||
Sbjct: 35667172 cctccaacttctttcggaacttcggaattgcttcagctttgacggccatcactaagccca 35667231

                                  
Query: 390      tctccttgtagttcttca 407
                |||||||||| |||||||
Sbjct: 35667232 tctccttgtaattcttca 35667249

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                            
Query: 330      cctccagcttcttgcggaacttcgggatcacgtcggctttgacgcacatcaccaggccca 389
                |||||| |||||| ||||||||||| ||  | || |||||||||  |||||| | |||||
Sbjct: 35757245 cctccaacttctttcggaacttcggaattgcttcagctttgacggccatcactaagccca 35757304

                                  
Query: 390      tctccttgtagttcttca 407
                |||||||||| |||||||
Sbjct: 35757305 tctccttgtaattcttca 35757322

>gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complete sequence
          Length = 116951

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 214    aactgtggtgacagttgcacaa 235
              ||||||||||||||||||||||
Sbjct: 112525 aactgtggtgacagttgcacaa 112504

>ref|NM_194303.1| Homo sapiens chromosome 10 open reading frame 39 (C10orf39), mRNA
          Length = 5006

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 86   atgcatgttttcacgcaacca 106
            |||||||||||||||||||||
Sbjct: 2781 atgcatgttttcacgcaacca 2801

>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12
          Length = 286550

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 385   gcccatctccttgtagttctt 405
             |||||||||||||||||||||
Sbjct: 59466 gcccatctccttgtagttctt 59486

>emb|AL512622.9| Human DNA sequence from clone RP11-140A10 on chromosome 10 Contains the
             3' end of the gene for protein kinase (PKE), the 3' end of
             a novel gene, possible ortholog of mouse RIKEN cDNA
             6330417G02 gene, a novel gene (LOC282973),  the DPYSL4
             gene for dihydropyrimidinase-like 4 (CRMP3, DRP-4, ULIP4),
             a novel gene and five CpG islands, complete sequence
          Length = 145630

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    atgcatgttttcacgcaacca 106
             |||||||||||||||||||||
Sbjct: 69619 atgcatgttttcacgcaacca 69639

>gb|BC045170.2| Homo sapiens chromosome 10 open reading frame 39, mRNA (cDNA clone
           IMAGE:4813872)
          Length = 3041

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 86  atgcatgttttcacgcaacca 106
           |||||||||||||||||||||
Sbjct: 755 atgcatgttttcacgcaacca 775

>emb|AL832756.1|HSM804067 Homo sapiens mRNA; cDNA DKFZp686B1027 (from clone DKFZp686B1027)
          Length = 5442

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 86   atgcatgttttcacgcaacca 106
            |||||||||||||||||||||
Sbjct: 3197 atgcatgttttcacgcaacca 3217

>emb|AL137551.1|HSM802289 Homo sapiens mRNA; cDNA DKFZp434D0720 (from clone DKFZp434D0720)
          Length = 2630

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 86  atgcatgttttcacgcaacca 106
           |||||||||||||||||||||
Sbjct: 393 atgcatgttttcacgcaacca 413

>dbj|AK126964.1| Homo sapiens cDNA FLJ45017 fis, clone BRAWH3015175
          Length = 5006

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 86   atgcatgttttcacgcaacca 106
            |||||||||||||||||||||
Sbjct: 2781 atgcatgttttcacgcaacca 2801

>dbj|AK095176.1| Homo sapiens cDNA FLJ37857 fis, clone BRSSN2015199
          Length = 3473

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 86   atgcatgttttcacgcaacca 106
            |||||||||||||||||||||
Sbjct: 1251 atgcatgttttcacgcaacca 1271

>dbj|AK097818.1| Homo sapiens cDNA FLJ40499 fis, clone TESTI2044968
          Length = 2294

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 86   atgcatgttttcacgcaacca 106
            |||||||||||||||||||||
Sbjct: 1685 atgcatgttttcacgcaacca 1705

>gb|AC104125.3| Homo sapiens chromosome 5 clone RP11-432G16, complete sequence
          Length = 180225

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 215   actgtggtgacagttgcacaa 235
             |||||||||||||||||||||
Sbjct: 22947 actgtggtgacagttgcacaa 22927

>gb|AC159206.2| Mus musculus BAC clone RP23-214M19 from chromosome 7, complete sequence
          Length = 224088

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 145   aactgaatacatgaaaagtat 165
             |||||||||||||||||||||
Sbjct: 41358 aactgaatacatgaaaagtat 41378

>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 218    gtggtgacagttgcacaatga 238
              |||||||||||||||||||||
Sbjct: 700786 gtggtgacagttgcacaatga 700766

>gb|AC149230.2| Pan troglodytes BAC clone CH251-557H16 from 7, complete sequence
          Length = 157879

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   gtggtgacagttgcacaatg 237
             ||||||||||||||||||||
Sbjct: 19634 gtggtgacagttgcacaatg 19653

>gb|AC113483.7| Mus musculus chromosome 1, clone RP23-343E12, complete sequence
          Length = 207188

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    cagttgaatcagaaatgtca 82
             ||||||||||||||||||||
Sbjct: 44724 cagttgaatcagaaatgtca 44743

>gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb12) gene,
           partial cds
          Length = 2020

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 gtggcaaaaactgaatacat 156
           ||||||||||||||||||||
Sbjct: 291 gtggcaaaaactgaatacat 272

>gb|AC089999.20| Homo sapiens 12 BAC RP11-545P7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 199522

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   gtggtgacagttgcacaatg 237
             ||||||||||||||||||||
Sbjct: 79383 gtggtgacagttgcacaatg 79364

>gb|AC004967.3| Homo sapiens PAC clone RP5-1111F22 from 7, complete sequence
          Length = 138107

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   gtggtgacagttgcacaatg 237
             ||||||||||||||||||||
Sbjct: 52936 gtggtgacagttgcacaatg 52955

>gb|AC004983.3| Homo sapiens PAC clone RP5-1163J12 from 7, complete sequence
          Length = 124821

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   gtggtgacagttgcacaatg 237
             ||||||||||||||||||||
Sbjct: 88877 gtggtgacagttgcacaatg 88896

>emb|AL590014.1| Human DNA sequence from clone RP11-449I6 on chromosome 6 Contains part
             of the EPB41L2 gene for erythrocyte membrane protein band
             4.1-like 2, complete sequence
          Length = 42959

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    tcagaaatgtcacacatgca 90
             ||||||||||||||||||||
Sbjct: 33504 tcagaaatgtcacacatgca 33523

>gb|AC118467.37| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence
          Length = 204699

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 137    gtggcaaaaactgaatacatgaaa 160
              |||||||| |||||||||||||||
Sbjct: 195350 gtggcaaacactgaatacatgaaa 195327

>gb|AC156549.8| Mus musculus chromosome 1, clone RP24-104O22, complete sequence
          Length = 164489

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   cagttgaatcagaaatgtca 82
            ||||||||||||||||||||
Sbjct: 7955 cagttgaatcagaaatgtca 7936

>gb|AC005342.1| Homo sapiens 12p13.3 PAC RPCI5-1096D14 (Roswell Park Cancer Institute
              Human PAC Library) complete sequence
          Length = 220257

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    tggcaaaaactgaatacatg 157
              ||||||||||||||||||||
Sbjct: 170498 tggcaaaaactgaatacatg 170517

>gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosome 14, complete sequence
          Length = 205679

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    tacagaaccagcctctttgt 211
              ||||||||||||||||||||
Sbjct: 203176 tacagaaccagcctctttgt 203195

>gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101J17 and RP11-501G11 map
             15q21.1, complete sequence
          Length = 185145

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   caaaaactgaatacatgaaa 160
             ||||||||||||||||||||
Sbjct: 80829 caaaaactgaatacatgaaa 80810

>emb|BX005264.10| Zebrafish DNA sequence from clone DKEY-63D22 in linkage group 2, complete
              sequence
          Length = 212605

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 206    ctttgtgcaactgtggtgacagtt 229
              ||||||| ||||||||||||||||
Sbjct: 169716 ctttgtgaaactgtggtgacagtt 169739

>gb|AC006963.4|AC006963 Homo sapiens PAC clone RP1-278D1 from X, complete sequence
          Length = 88215

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   tgtggtgacagttgcacaat 236
             ||||||||||||||||||||
Sbjct: 77319 tgtggtgacagttgcacaat 77338

>gb|AC129222.4| Mus musculus BAC clone RP24-532L14 from 14, complete sequence
          Length = 181469

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    tacagaaccagcctctttgt 211
              ||||||||||||||||||||
Sbjct: 135642 tacagaaccagcctctttgt 135623

>gb|AC132422.3| Mus musculus BAC clone RP23-302G15 from 12, complete sequence
          Length = 151358

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    actgaatacatgaaaagtat 165
              ||||||||||||||||||||
Sbjct: 107571 actgaatacatgaaaagtat 107590

>gb|AC148005.3| Mus musculus BAC clone RP23-295O6 from 12, complete sequence
          Length = 151918

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   actgaatacatgaaaagtat 165
             ||||||||||||||||||||
Sbjct: 10760 actgaatacatgaaaagtat 10741

>gb|AC144779.3| Mus musculus BAC clone RP23-331N18 from 5, complete sequence
          Length = 168358

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 137    gtggcaaaaactgaatacatgaaa 160
              |||||||| |||||||||||||||
Sbjct: 112664 gtggcaaacactgaatacatgaaa 112687


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,733,546
Number of Sequences: 3902068
Number of extensions: 4733546
Number of successful extensions: 85697
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85607
Number of HSP's gapped (non-prelim): 90
length of query: 499
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 477
effective length of database: 17,147,199,772
effective search space: 8179214291244
effective search space used: 8179214291244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)