Clone Name	rbags22a12
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	82	3e-12
2	dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic D...	82	3e-12
3	gb|AY074788.1| Lycopersicon esculentum molybdenum cofactor sulfu...	46	0.15
4	gb|AC165178.2| Zea mays clone ZMMBBb-272P17, complete sequence	44	0.58
5	gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence	44	0.58
6	gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence	44	0.58
7	gb|AC166709.9| Mus musculus chromosome 1, clone RP23-406B10, com...	42	2.3
8	gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, com...	42	2.3
9	gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section ...	42	2.3
10	gb|BC062796.1| Homo sapiens cDNA clone IMAGE:6104789, partial cds	42	2.3
11	emb|AL135927.14| Human DNA sequence from clone RP11-54H19 on chr...	42	2.3
12	gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome...	42	2.3
13	emb|BX296521.18| Zebrafish DNA sequence from clone CH211-194E11 ...	42	2.3
14	emb|BX842701.16| Zebrafish DNA sequence from clone CH211-223L2, ...	42	2.3
15	gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P...	42	2.3
16	gb|AC007227.3|AC007227 Homo sapiens chromosome 1 clone RPCI-11_5...	42	2.3
17	emb|BX001058.4| Zebrafish DNA sequence from clone CH211-14I21, c...	42	2.3
18	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	42	2.3
19	gb|AC151776.1| Ornithorhynchus anatinus chromosome UNK clone OAB...	40	9.1
20	gb|AC168064.3| Mus musculus BAC clone RP23-182K16 from chromosom...	40	9.1
21	gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome	40	9.1
22	gb|DQ226580.1| Boechera divaricarpa isolate SLW-2-E01 mRNA sequence	40	9.1
23	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	40	9.1
24	gb|AC091125.1| Caenorhabditis elegans cosmid Y67D2, complete seq...	40	9.1
25	emb|CT009567.9| Mouse DNA sequence from clone RP23-50H13 on chro...	40	9.1
26	gb|AC132330.5| Mus musculus BAC clone RP24-213O22 from chromosom...	40	9.1
27	ref|XM_776851.1| PREDICTED: Strongylocentrotus purpuratus simila...	40	9.1
28	emb|BX682542.5| Mouse DNA sequence from clone RP23-125N5 on chro...	40	9.1
29	gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str...	40	9.1
30	gb|AC112217.2| Homo sapiens chromosome 3 clone CTD-2028L5, compl...	40	9.1
31	emb|BX469925.6| Zebrafish DNA sequence from clone DKEY-14O1 in l...	40	9.1
32	dbj|AK035448.1| Mus musculus adult male urinary bladder cDNA, RI...	40	9.1
33	ref|NM_001027758.1| Caenorhabditis elegans Y67D2.1b (Y67D2.1) mR...	40	9.1
34	ref|NM_001027757.2| Caenorhabditis elegans Y67D2.1a (Y67D2.1) mR...	40	9.1
35	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.1
36	gb|AF241110.1|AF241110S1 Taracus pallipes RNA polymerase II larg...	40	9.1
37	emb|BX005061.9| Zebrafish DNA sequence from clone CH211-158F5 in...	40	9.1
38	gb|AF240977.1|AF240977S1 Caeculus sp. 'Cae' RNA polymerase II la...	40	9.1
39	gb|AC084446.1|AC084446 Caenorhabditis briggsae cosmid CB018G16, ...	40	9.1
40	gb|AC012087.10|AC012087 Homo sapiens 3 BAC RP11-317L10,RP11-150K...	40	9.1
41	gb|AC008548.6| Homo sapiens chromosome 5 clone CTC-505D13, compl...	40	9.1
42	dbj|AK070090.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	9.1
43	emb|BX511244.8| Zebrafish DNA sequence from clone DKEY-185L3 in ...	40	9.1
44	dbj|AK059756.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	9.1
45	gb|AY773199.1| Synthetic construct 30S ribosomal RNA protein ope...	40	9.1
46	gb|AF042840.1|AF042840 Oryza sativa clone F14605 calmodulin (CaM...	40	9.1
47	gb|DQ270232.1| Human respiratory syncytial virus B isolate H5598...	40	9.1
48	emb|AL731672.12| Mouse DNA sequence from clone RP23-161L11 on ch...	40	9.1
49	emb|AL929443.4| Mouse DNA sequence from clone RP23-467A7 on chro...	40	9.1
50	gb|M62507.1|BUTAMYAA B.fibrisolvens alpha-amylase (amyA) gene, c...	40	9.1
51	emb|AL670680.6| Mouse DNA sequence from clone RP23-314D24 on chr...	40	9.1

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                            
Query: 517      agccgactgttgagatcagagacactctcttcagatattagtagcagttgtccttcattc 576
                |||||||| ||||| |||||||  || ||||| ||||||||||| |||||||||||||| 
Sbjct: 27371573 agccgactattgaggtcagagatgctttcttctgatattagtagtagttgtccttcatta 27371514

                                 
Query: 577      acaaaactaagtttgct 593
                |||||| ||||||||||
Sbjct: 27371513 acaaaattaagtttgct 27371497



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                            
Query: 409      ttccagttgtcttctctgtatggcgtcgagccagagataacgatgttggggcgaaatctc 468
                |||||||| || || ||||||||  |||| ||||||||||| | |||||| || ||||||
Sbjct: 27371877 ttccagttatcctcactgtatggactcgacccagagataacaaggttgggacggaatctc 27371818

                            
Query: 469      attgcatcaaca 480
                ||||||||||||
Sbjct: 27371817 attgcatcaaca 27371806



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 154      tctgtcgaagcgtgcacttcttgccctacttggagccatctc 195
                ||||| |||| || ||||| |||||| |||||||||||||||
Sbjct: 27372322 tctgtggaagggtacacttgttgccccacttggagccatctc 27372281



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 301      ggttcctttgacttgatcacctggcccgcattctggtgcaagttgatcatctggcaacgg 360
                ||||||||||| |||| |||||| || |  | |||||| |  ||||||||||| || || 
Sbjct: 27372092 ggttcctttgatttgagcacctgcccggagtcctggtgtagattgatcatctgacagcga 27372033

                                 
Query: 361      ttgcatccacccatgga 377
                |||||||| ||||||||
Sbjct: 27372032 ttgcatcctcccatgga 27372016

---

>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0686E06
          Length = 150474

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                          
Query: 517    agccgactgttgagatcagagacactctcttcagatattagtagcagttgtccttcattc 576
              |||||||| ||||| |||||||  || ||||| ||||||||||| |||||||||||||| 
Sbjct: 114400 agccgactattgaggtcagagatgctttcttctgatattagtagtagttgtccttcatta 114341

                               
Query: 577    acaaaactaagtttgct 593
              |||||| ||||||||||
Sbjct: 114340 acaaaattaagtttgct 114324



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                          
Query: 409    ttccagttgtcttctctgtatggcgtcgagccagagataacgatgttggggcgaaatctc 468
              |||||||| || || ||||||||  |||| ||||||||||| | |||||| || ||||||
Sbjct: 114704 ttccagttatcctcactgtatggactcgacccagagataacaaggttgggacggaatctc 114645

                          
Query: 469    attgcatcaaca 480
              ||||||||||||
Sbjct: 114644 attgcatcaaca 114633



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 154    tctgtcgaagcgtgcacttcttgccctacttggagccatctc 195
              ||||| |||| || ||||| |||||| |||||||||||||||
Sbjct: 115149 tctgtggaagggtacacttgttgccccacttggagccatctc 115108



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                          
Query: 301    ggttcctttgacttgatcacctggcccgcattctggtgcaagttgatcatctggcaacgg 360
              ||||||||||| |||| |||||| || |  | |||||| |  ||||||||||| || || 
Sbjct: 114919 ggttcctttgatttgagcacctgcccggagtcctggtgtagattgatcatctgacagcga 114860

                               
Query: 361    ttgcatccacccatgga 377
              |||||||| ||||||||
Sbjct: 114859 ttgcatcctcccatgga 114843

---

>gb|AY074788.1| Lycopersicon esculentum molybdenum cofactor sulfurase (FLACCA) mRNA,
            complete cds
          Length = 3086

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 343  ttgatcatctggcaacggttgcatccaccca 373
            ||||||||||||||||| ||||| |||||||
Sbjct: 2264 ttgatcatctggcaacgattgcaaccaccca 2234

---

>gb|AC165178.2| Zea mays clone ZMMBBb-272P17, complete sequence
          Length = 131485

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 35     agaactaaacatgttttgtacgttta 60
              |||||||||||||||||||| |||||
Sbjct: 103966 agaactaaacatgttttgtaggttta 103941

---

>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence
          Length = 366120

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 35     agaactaaacatgttttgtacgttta 60
              |||||||||||||||||||| |||||
Sbjct: 246938 agaactaaacatgttttgtaggttta 246963

---

>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence
          Length = 203581

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 35     agaactaaacatgttttgtacgttta 60
              |||||||||||||||||||| |||||
Sbjct: 126661 agaactaaacatgttttgtaggttta 126636

---

>gb|AC166709.9| Mus musculus chromosome 1, clone RP23-406B10, complete sequence
          Length = 175924

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 545   cttcagatattagtagcagtt 565
             |||||||||||||||||||||
Sbjct: 60005 cttcagatattagtagcagtt 59985

---

>gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, complete sequence
          Length = 208546

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 545    cttcagatattagtagcagtt 565
              |||||||||||||||||||||
Sbjct: 198102 cttcagatattagtagcagtt 198082

---

>gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section 8 of 9 of the complete
             sequence
          Length = 251762

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    tatacaaaaatattacatata 116
             |||||||||||||||||||||
Sbjct: 24611 tatacaaaaatattacatata 24591

---

>gb|BC062796.1| Homo sapiens cDNA clone IMAGE:6104789, partial cds
          Length = 1183

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 560 gcagttgtccttcattcacaaaact 584
           ||||||||||||||||| |||||||
Sbjct: 272 gcagttgtccttcattcccaaaact 296

---

>emb|AL135927.14| Human DNA sequence from clone RP11-54H19 on chromosome 1 Contains the
             3' end of the LMNA gene for lamin A/C, the gene for a
             novel protein similar to semaphorins (FLJ12287), a novel
             gene (KIAA0446), the PMF1 gene for polyamine-modulated
             factor 1, the BGLAP gene for bone gamma-carboxyglutamate
             (gla) protein (osteocalcin), the gene for progestin and
             adipoQ receptor family member VI (PAQR6) and the 3' end of
             the gene for Est1p-like protein B (EST1B), complete
             sequence
          Length = 164168

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 560   gcagttgtccttcattcacaaaact 584
             ||||||||||||||||| |||||||
Sbjct: 82064 gcagttgtccttcattcccaaaact 82040

---

>gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome 12, complete sequence
          Length = 207840

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 252    aaacagaatctttcccttttc 272
              |||||||||||||||||||||
Sbjct: 135168 aaacagaatctttcccttttc 135188

---

>emb|BX296521.18| Zebrafish DNA sequence from clone CH211-194E11 in linkage group 7,
              complete sequence
          Length = 185817

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 96     tatacaaaaatattacatata 116
              |||||||||||||||||||||
Sbjct: 135717 tatacaaaaatattacatata 135737

---

>emb|BX842701.16| Zebrafish DNA sequence from clone CH211-223L2, complete sequence
          Length = 172765

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    aaaaatattacatatagacat 121
              |||||||||||||||||||||
Sbjct: 144114 aaaaatattacatatagacat 144094

---

>gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P9 genomic sequence, complete
             sequence
          Length = 108387

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 50    ttgtacgtttagtttctttttccgg 74
             ||||||||||||||| |||||||||
Sbjct: 12283 ttgtacgtttagtttgtttttccgg 12259

---

>gb|AC007227.3|AC007227 Homo sapiens chromosome 1 clone RPCI-11_54H19, complete sequence
          Length = 164179

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 560   gcagttgtccttcattcacaaaact 584
             ||||||||||||||||| |||||||
Sbjct: 82106 gcagttgtccttcattcccaaaact 82130

---

>emb|BX001058.4| Zebrafish DNA sequence from clone CH211-14I21, complete sequence
          Length = 209611

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 96     tatacaaaaatattacatata 116
              |||||||||||||||||||||
Sbjct: 196529 tatacaaaaatattacatata 196509

---

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 206   tctcttcttctccatccaaac 226
             |||||||||||||||||||||
Sbjct: 23603 tctcttcttctccatccaaac 23583

---

>gb|AC151776.1| Ornithorhynchus anatinus chromosome UNK clone OABb-272A1, complete
             sequence
          Length = 126974

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   tcttcttctccatccaaacc 227
             ||||||||||||||||||||
Sbjct: 14285 tcttcttctccatccaaacc 14304

---

>gb|AC168064.3| Mus musculus BAC clone RP23-182K16 from chromosome 14, complete
             sequence
          Length = 220900

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aatattgcacagagtacact 33
             ||||||||||||||||||||
Sbjct: 84497 aatattgcacagagtacact 84516

---

>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 9       cgaaaaatattgcacagagt 28
               ||||||||||||||||||||
Sbjct: 1094388 cgaaaaatattgcacagagt 1094407

---

>gb|DQ226580.1| Boechera divaricarpa isolate SLW-2-E01 mRNA sequence
          Length = 125

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 206 tctcttcttctccatccaaa 225
           ||||||||||||||||||||
Sbjct: 16  tctcttcttctccatccaaa 35

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 192      tctctccgcgacggtctcttcttc 215
                |||||||||||||||||| |||||
Sbjct: 11495824 tctctccgcgacggtctcgtcttc 11495847

---

>gb|AC091125.1| Caenorhabditis elegans cosmid Y67D2, complete sequence
          Length = 44364

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   tgtgaagcctcttccagttg 417
             ||||||||||||||||||||
Sbjct: 39166 tgtgaagcctcttccagttg 39147

---

>emb|CT009567.9| Mouse DNA sequence from clone RP23-50H13 on chromosome 16, complete
              sequence
          Length = 213704

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 569    cttcattcacaaaactaagt 588
              ||||||||||||||||||||
Sbjct: 135997 cttcattcacaaaactaagt 135978

---

>gb|AC132330.5| Mus musculus BAC clone RP24-213O22 from chromosome 14, complete
             sequence
          Length = 178081

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    aatattgcacagagtacact 33
             ||||||||||||||||||||
Sbjct: 34884 aatattgcacagagtacact 34865

---

>ref|XM_776851.1| PREDICTED: Strongylocentrotus purpuratus similar to Ran
           GTPase-activating protein 1 (LOC576552), mRNA
          Length = 1170

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 297 tagcggttcctttgacttga 316
           ||||||||||||||||||||
Sbjct: 652 tagcggttcctttgacttga 633

---

>emb|BX682542.5| Mouse DNA sequence from clone RP23-125N5 on chromosome 4, complete
              sequence
          Length = 144906

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    aaaaatattacatatagaca 120
              ||||||||||||||||||||
Sbjct: 101761 aaaaatattacatatagaca 101780

---

>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 192   tctctccgcgacggtctcttcttc 215
             |||||||||||||||||| |||||
Sbjct: 46396 tctctccgcgacggtctcgtcttc 46419

---

>gb|AC112217.2| Homo sapiens chromosome 3 clone CTD-2028L5, complete sequence
          Length = 156545

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    tcttctccatccaaaccatc 230
              ||||||||||||||||||||
Sbjct: 130868 tcttctccatccaaaccatc 130887

---

>emb|BX469925.6| Zebrafish DNA sequence from clone DKEY-14O1 in linkage group 17,
             complete sequence
          Length = 86811

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   cattgcttgaactaagccga 522
             ||||||||||||||||||||
Sbjct: 27644 cattgcttgaactaagccga 27625

---

>dbj|AK035448.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530050B10
            product:unclassifiable, full insert sequence
          Length = 3285

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   aatattgcacagagtacact 33
            ||||||||||||||||||||
Sbjct: 2385 aatattgcacagagtacact 2404

---

>ref|NM_001027758.1| Caenorhabditis elegans Y67D2.1b (Y67D2.1) mRNA, complete cds
          Length = 1305

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 398 tgtgaagcctcttccagttg 417
           ||||||||||||||||||||
Sbjct: 377 tgtgaagcctcttccagttg 358

---

>ref|NM_001027757.2| Caenorhabditis elegans Y67D2.1a (Y67D2.1) mRNA, complete cds
          Length = 1650

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 398 tgtgaagcctcttccagttg 417
           ||||||||||||||||||||
Sbjct: 377 tgtgaagcctcttccagttg 358

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 192      tctctccgcgacggtctcttcttc 215
                |||||||||||||||||| |||||
Sbjct: 11492587 tctctccgcgacggtctcgtcttc 11492610

---

>gb|AF241110.1|AF241110S1 Taracus pallipes RNA polymerase II largest subunit mRNA, partial
           cds
          Length = 349

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 ctccatccaaaccatcttcg 234
           ||||||||||||||||||||
Sbjct: 89  ctccatccaaaccatcttcg 70

---

>emb|BX005061.9| Zebrafish DNA sequence from clone CH211-158F5 in linkage group 5,
             complete sequence
          Length = 155854

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    aaatattgcacagagtacac 32
             ||||||||||||||||||||
Sbjct: 38204 aaatattgcacagagtacac 38185

---

>gb|AF240977.1|AF240977S1 Caeculus sp. 'Cae' RNA polymerase II largest subunit mRNA, partial
           cds
          Length = 349

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 ctccatccaaaccatcttcg 234
           ||||||||||||||||||||
Sbjct: 89  ctccatccaaaccatcttcg 70

---

>gb|AC084446.1|AC084446 Caenorhabditis briggsae cosmid CB018G16, complete sequence
          Length = 46701

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    aatattgcacagagtacact 33
             ||||||||||||||||||||
Sbjct: 41622 aatattgcacagagtacact 41603

---

>gb|AC012087.10|AC012087 Homo sapiens 3 BAC RP11-317L10,RP11-150K6,RP11-68D12 (Roswell Park Cancer
              Institute Human BAC Library) complete sequence
          Length = 194635

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    tcttctccatccaaaccatc 230
              ||||||||||||||||||||
Sbjct: 165854 tcttctccatccaaaccatc 165835

---

>gb|AC008548.6| Homo sapiens chromosome 5 clone CTC-505D13, complete sequence
          Length = 116730

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    aaaatattacatatagacat 121
              ||||||||||||||||||||
Sbjct: 101554 aaaatattacatatagacat 101573

---

>dbj|AK070090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040P16, full
           insert sequence
          Length = 851

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 192 tctctccgcgacggtctcttcttc 215
           |||||||||||||||||| |||||
Sbjct: 24  tctctccgcgacggtctcgtcttc 47

---

>emb|BX511244.8| Zebrafish DNA sequence from clone DKEY-185L3 in linkage group 20,
             complete sequence
          Length = 116609

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 521   gactgttgagatcagagacactct 544
             ||||||||| ||||||||||||||
Sbjct: 41405 gactgttgacatcagagacactct 41382

---

>dbj|AK059756.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C05, full
           insert sequence
          Length = 948

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 192 tctctccgcgacggtctcttcttc 215
           |||||||||||||||||| |||||
Sbjct: 20  tctctccgcgacggtctcgtcttc 43

---

>gb|AY773199.1| Synthetic construct 30S ribosomal RNA protein operon, complete
            sequence
          Length = 14593

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  caaacagaatctttcccttt 270
            ||||||||||||||||||||
Sbjct: 2355 caaacagaatctttcccttt 2336

---

>gb|AF042840.1|AF042840 Oryza sativa clone F14605 calmodulin (CaM1) mRNA, complete cds
          Length = 824

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 192 tctctccgcgacggtctcttcttc 215
           |||||||||||||||||| |||||
Sbjct: 4   tctctccgcgacggtctcgtcttc 27

---

>gb|DQ270232.1| Human respiratory syncytial virus B isolate H5598 glycoprotein (G)
           gene, complete cds
          Length = 909

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  tagtttctttttccggtgtt 78
           ||||||||||||||||||||
Sbjct: 685 tagtttctttttccggtgtt 666

---

>emb|AL731672.12| Mouse DNA sequence from clone RP23-161L11 on chromosome X, complete
             sequence
          Length = 232171

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   gacactctcttcagatatta 556
             ||||||||||||||||||||
Sbjct: 33475 gacactctcttcagatatta 33494

---

>emb|AL929443.4| Mouse DNA sequence from clone RP23-467A7 on chromosome 2, complete
              sequence
          Length = 189821

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    aggataccaaacagaatctt 263
              ||||||||||||||||||||
Sbjct: 152762 aggataccaaacagaatctt 152781

---

>gb|M62507.1|BUTAMYAA B.fibrisolvens alpha-amylase (amyA) gene, complete cds
          Length = 3523

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 488  gctgcgtaccatttccattg 507
            ||||||||||||||||||||
Sbjct: 3217 gctgcgtaccatttccattg 3198

---

>emb|AL670680.6| Mouse DNA sequence from clone RP23-314D24 on chromosome 4, complete
             sequence
          Length = 150897

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   ctcttcttctccatccaaac 226
             ||||||||||||||||||||
Sbjct: 47210 ctcttcttctccatccaaac 47229


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,497,792
Number of Sequences: 3902068
Number of extensions: 6497792
Number of successful extensions: 122523
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122317
Number of HSP's gapped (non-prelim): 204
length of query: 666
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 643
effective length of database: 17,143,297,704
effective search space: 11023140423672
effective search space used: 11023140423672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---