ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22a08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104879.1| Zea mays PCO135342 mRNA sequence Length = 916 Score = 434 bits (219), Expect = e-118 Identities = 303/331 (91%) Strand = Plus / Minus Query: 197 ggcctagggccgtcgtccctgcgcctgaaacgctgcgggggctcacggttcctcctgttc 256 ||||| ||||| || |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 417 ggccttgggccatcatcccggcgcctgaaacgctgcgggggctcacggttcctcctgttc 358 Query: 257 tcacgggagcggacacggacaatgtgagcatggatggcacaagaaacacagtggtgcacc 316 ||||| |||||||||||||||||||| |||||||| || || || |||||||| || ||| Sbjct: 357 tcacgagagcggacacggacaatgtgcgcatggattgcgcatgagacacagtgatgaacc 298 Query: 317 ttggcatacagcttggggagaacatatccatcatgcacacaagcctcctgcacatctctc 376 || || |||| ||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 297 tttgcgtacaatttgggaagaacatatccatcatgcacacaagcctcctgcacgtccctc 238 Query: 377 acagcagcctgctccacaatgttcctcaccaagaaacgcttgatagccttgtccttgggg 436 |||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 237 acagcagcctgctcaacaatgttcctcaccaagaaccgcttgatagccttatcctttgga 178 Query: 437 cagcacttggcgcagttggagcagcggatgtacttgacatggccgcggccgtgcttgttg 496 |||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct: 177 cagcacttggcgcagttggagcagcgtatgtacttgacgtggccgcgcccgtgcttgttg 118 Query: 497 cggccgccgttcctccgcttgaacgtcatgg 527 || |||||||||||||||||||||||||||| Sbjct: 117 cgtccgccgttcctccgcttgaacgtcatgg 87
>dbj|AK061933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D01, full insert sequence Length = 664 Score = 270 bits (136), Expect = 5e-69 Identities = 271/316 (85%) Strand = Plus / Minus Query: 212 tccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggaca 271 |||||||||||||| | || ||| ||| |||| ||| | |||||| |||||||||||| Sbjct: 365 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 306 Query: 272 cggacaatgtgagcatggatggcacaagaaacacagtggtgcaccttggcatacagcttg 331 ||||| ||||| || |||||||| || || || ||||| || |||||||| |||||||| Sbjct: 305 cggacgatgtgggcgtggatggcgcaggagacgcagtgatggaccttggcgtacagcttc 246 Query: 332 gggagaacatatccatcatgcacacaagcctcctgcacatctctcacagcagcctgctcc 391 ||||| || ||||| ||||| || || |||||||| ||||| || | || |||||||| Sbjct: 245 gggaggacgtatccgtcatggacgcacgcctcctggacatccctgatggccgcctgctcg 186 Query: 392 acaatgttcctcaccaagaaacgcttgatagccttgtccttggggcagcacttggcgcag 451 || |||||||||||| ||| | |||||| |||||||||||||||||||||||||||||| Sbjct: 185 acgatgttcctcacctggaacctcttgatggccttgtccttggggcagcacttggcgcag 126 Query: 452 ttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccgccgttcctc 511 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 125 ttggagcagcggatgtacttcacatggccgcggccatgcttgttgcggccgccgttcctg 66 Query: 512 cgcttgaacgtcatgg 527 |||||||| ||||||| Sbjct: 65 cgcttgaaggtcatgg 50
>dbj|AK119797.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-H04, full insert sequence Length = 616 Score = 270 bits (136), Expect = 5e-69 Identities = 271/316 (85%) Strand = Plus / Minus Query: 212 tccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggaca 271 |||||||||||||| | || ||| ||| |||| ||| | |||||| |||||||||||| Sbjct: 365 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 306 Query: 272 cggacaatgtgagcatggatggcacaagaaacacagtggtgcaccttggcatacagcttg 331 ||||| ||||| || |||||||| || || || ||||| || |||||||| |||||||| Sbjct: 305 cggacgatgtgggcgtggatggcgcaggagacgcagtgatggaccttggcgtacagcttc 246 Query: 332 gggagaacatatccatcatgcacacaagcctcctgcacatctctcacagcagcctgctcc 391 ||||| || ||||| ||||| || || |||||||| ||||| || | || |||||||| Sbjct: 245 gggaggacgtatccgtcatggacgcacgcctcctggacatccctgatggccgcctgctcg 186 Query: 392 acaatgttcctcaccaagaaacgcttgatagccttgtccttggggcagcacttggcgcag 451 || |||||||||||| ||| | |||||| |||||||||||||||||||||||||||||| Sbjct: 185 acgatgttcctcacctggaacctcttgatggccttgtccttggggcagcacttggcgcag 126 Query: 452 ttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccgccgttcctc 511 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 125 ttggagcagcggatgtacttcacatggccgcggccatgcttgttgcggccgccgttcctg 66 Query: 512 cgcttgaacgtcatgg 527 |||||||| ||||||| Sbjct: 65 cgcttgaaggtcatgg 50
>dbj|AK119683.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A02, full insert sequence Length = 641 Score = 270 bits (136), Expect = 5e-69 Identities = 271/316 (85%) Strand = Plus / Minus Query: 212 tccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggaca 271 |||||||||||||| | || ||| ||| |||| ||| | |||||| |||||||||||| Sbjct: 366 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 307 Query: 272 cggacaatgtgagcatggatggcacaagaaacacagtggtgcaccttggcatacagcttg 331 ||||| ||||| || |||||||| || || || ||||| || |||||||| |||||||| Sbjct: 306 cggacgatgtgggcgtggatggcgcaggagacgcagtgatggaccttggcgtacagcttc 247 Query: 332 gggagaacatatccatcatgcacacaagcctcctgcacatctctcacagcagcctgctcc 391 ||||| || ||||| ||||| || || |||||||| ||||| || | || |||||||| Sbjct: 246 gggaggacgtatccgtcatggacgcacgcctcctggacatccctgatggccgcctgctcg 187 Query: 392 acaatgttcctcaccaagaaacgcttgatagccttgtccttggggcagcacttggcgcag 451 || |||||||||||| ||| | |||||| |||||||||||||||||||||||||||||| Sbjct: 186 acgatgttcctcacctggaacctcttgatggccttgtccttggggcagcacttggcgcag 127 Query: 452 ttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccgccgttcctc 511 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 126 ttggagcagcggatgtacttcacatggccgcggccatgcttgttgcggccgccgttcctg 67 Query: 512 cgcttgaacgtcatgg 527 |||||||| ||||||| Sbjct: 66 cgcttgaaggtcatgg 51
>dbj|AK098982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091A22, full insert sequence Length = 620 Score = 270 bits (136), Expect = 5e-69 Identities = 271/316 (85%) Strand = Plus / Minus Query: 212 tccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggaca 271 |||||||||||||| | || ||| ||| |||| ||| | |||||| |||||||||||| Sbjct: 367 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 308 Query: 272 cggacaatgtgagcatggatggcacaagaaacacagtggtgcaccttggcatacagcttg 331 ||||| ||||| || |||||||| || || || ||||| || |||||||| |||||||| Sbjct: 307 cggacgatgtgggcgtggatggcgcaggagacgcagtgatggaccttggcgtacagcttc 248 Query: 332 gggagaacatatccatcatgcacacaagcctcctgcacatctctcacagcagcctgctcc 391 ||||| || ||||| ||||| || || |||||||| ||||| || | || |||||||| Sbjct: 247 gggaggacgtatccgtcatggacgcacgcctcctggacatccctgatggccgcctgctcg 188 Query: 392 acaatgttcctcaccaagaaacgcttgatagccttgtccttggggcagcacttggcgcag 451 || |||||||||||| ||| | |||||| |||||||||||||||||||||||||||||| Sbjct: 187 acgatgttcctcacctggaacctcttgatggccttgtccttggggcagcacttggcgcag 128 Query: 452 ttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccgccgttcctc 511 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 127 ttggagcagcggatgtacttcacatggccgcggccatgcttgttgcggccgccgttcctg 68 Query: 512 cgcttgaacgtcatgg 527 |||||||| ||||||| Sbjct: 67 cgcttgaaggtcatgg 52
>ref|XM_475416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 585 Score = 262 bits (132), Expect = 1e-66 Identities = 264/308 (85%) Strand = Plus / Minus Query: 212 tccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggaca 271 |||||||||||||| | || ||| ||| |||| ||| | |||||| |||||||||||| Sbjct: 488 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 429 Query: 272 cggacaatgtgagcatggatggcacaagaaacacagtggtgcaccttggcatacagcttg 331 ||||| ||||| || |||||||| || || || ||||| || |||||||| |||||||| Sbjct: 428 cggacgatgtgggcgtggatggcgcaggagacgcagtgatggaccttggcgtacagcttc 369 Query: 332 gggagaacatatccatcatgcacacaagcctcctgcacatctctcacagcagcctgctcc 391 ||||| || ||||| ||||| || || |||||||| ||||| || | || |||||||| Sbjct: 368 gggaggacgtatccgtcatggacgcacgcctcctggacatccctgatggccgcctgctcg 309 Query: 392 acaatgttcctcaccaagaaacgcttgatagccttgtccttggggcagcacttggcgcag 451 || |||||||||||| ||| | |||||| |||||||||||||||||||||||||||||| Sbjct: 308 acgatgttcctcacctggaacctcttgatggccttgtccttggggcagcacttggcgcag 249 Query: 452 ttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccgccgttcctc 511 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 248 ttggagcagcggatgtacttcacatggccgcggccatgcttgttgcggccgccgttcctg 189 Query: 512 cgcttgaa 519 |||||||| Sbjct: 188 cgcttgaa 181
>dbj|AK121584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037F24, full insert sequence Length = 947 Score = 262 bits (132), Expect = 1e-66 Identities = 270/316 (85%) Strand = Plus / Minus Query: 212 tccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggaca 271 |||||||||||||| | || ||| ||| |||| ||| | |||||| |||||||||||| Sbjct: 366 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 307 Query: 272 cggacaatgtgagcatggatggcacaagaaacacagtggtgcaccttggcatacagcttg 331 |||| ||||| || |||||||| || || || ||||| || |||||||| |||||||| Sbjct: 306 cggatgatgtgggcgtggatggcgcaggagacgcagtgatggaccttggcgtacagcttc 247 Query: 332 gggagaacatatccatcatgcacacaagcctcctgcacatctctcacagcagcctgctcc 391 ||||| || ||||| ||||| || || |||||||| ||||| || | || |||||||| Sbjct: 246 gggaggacgtatccgtcatggacgcacgcctcctggacatccctgatggccgcctgctcg 187 Query: 392 acaatgttcctcaccaagaaacgcttgatagccttgtccttggggcagcacttggcgcag 451 || |||||||||||| ||| | |||||| |||||||||||||||||||||||||||||| Sbjct: 186 acgatgttcctcacctggaacctcttgatggccttgtccttggggcagcacttggcgcag 127 Query: 452 ttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccgccgttcctc 511 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 126 ttggagcagcggatgtacttcacatggccgcggccatgcttgttgcggccgccgttcctg 67 Query: 512 cgcttgaacgtcatgg 527 |||||||| ||||||| Sbjct: 66 cgcttgaaggtcatgg 51
>dbj|AK119693.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-C03, full insert sequence Length = 618 Score = 254 bits (128), Expect = 3e-64 Identities = 269/316 (85%) Strand = Plus / Minus Query: 212 tccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggaca 271 |||||||||||||| | || ||| ||| |||| ||| | |||||| |||||||||||| Sbjct: 365 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 306 Query: 272 cggacaatgtgagcatggatggcacaagaaacacagtggtgcaccttggcatacagcttg 331 ||||| ||||| || |||||||| || || || ||||| || |||||||| |||||||| Sbjct: 305 cggacgatgtgggcgtggatggcgcaggagacgcagtgatggaccttggcgtacagcttc 246 Query: 332 gggagaacatatccatcatgcacacaagcctcctgcacatctctcacagcagcctgctcc 391 ||||| || ||||| ||||| || || |||||||| ||||| || | || |||||||| Sbjct: 245 gggaggacgtatccgtcatggacgcacgcctcctggacatccctgatggccgcctgctcg 186 Query: 392 acaatgttcctcaccaagaaacgcttgatagccttgtccttggggcagcacttggcgcag 451 || |||||||||||| ||| | |||| | |||||||||||||||||||||||||||||| Sbjct: 185 acgatgttcctcacctggaacctcttggtggccttgtccttggggcagcacttggcgcag 126 Query: 452 ttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccgccgttcctc 511 |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct: 125 ttggagcagcggatgtacttcacatggccgcggccatgcctgttgcggccgccgttcctg 66 Query: 512 cgcttgaacgtcatgg 527 |||||||| ||||||| Sbjct: 65 cgcttgaaggtcatgg 50
>dbj|D38011.1|RICRPS31 Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein S31, complete cds Length = 552 Score = 252 bits (127), Expect = 1e-63 Identities = 229/263 (87%) Strand = Plus / Minus Query: 242 cggttcctcctgttctcacgggagcggacacggacaatgtgagcatggatggcacaagaa 301 |||| ||||| |||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 334 cggtccctccggttctcacgggagcggacacggacgatgtgagcatggattgcacaggac 275 Query: 302 acacagtggtgcaccttggcatacagcttggggagaacatatccatcatgcacacaagcc 361 |||||||| ||||||||||| || |||||||||||||| |||||||| ||||| || || Sbjct: 274 acacagtgatgcaccttggcgtaaagcttggggagaacgtatccatcgtgcacgcacccc 215 Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| || || || | || |||||||||| |||||||||||| || | |||||| Sbjct: 214 tcctggacgtccctgatggcgacctgctccacgatgttcctcacctgaaacctcttgatc 155 Query: 422 gccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgacatggccg 481 |||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 154 gccttgtccttgggacagcacttggcgcagttggagcagcggatgtacttgacgtgcccg 95 Query: 482 cggccgtgcttgttgcggccgcc 504 || ||||||||| |||||||||| Sbjct: 94 cgaccgtgcttgatgcggccgcc 72
>gb|AY106241.1| Zea mays PCO086893 mRNA sequence Length = 791 Score = 206 bits (104), Expect = 6e-50 Identities = 248/296 (83%) Strand = Plus / Minus Query: 212 tccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggaca 271 |||||||||||||| |||| ||| |||| |||| ||| | ||||||||||| ||||| Sbjct: 435 tccctgcgcctgaagcgctccggcggcttgcggtccctgcgcttctcacgggatcggacg 376 Query: 272 cggacaatgtgagcatggatggcacaagaaacacagtggtgcaccttggcatacagcttg 331 ||||| |||||||| ||||| || || || || ||||||||||||||||| |||||||| Sbjct: 375 cggacgatgtgagcgtggatcgcgcacgagacgcagtggtgcaccttggcgtacagcttc 316 Query: 332 gggagaacatatccatcatgcacacaagcctcctgcacatctctcacagcagcctgctcc 391 ||||| || || ||||||| || || || ||||| || || || | || ||||| ||| Sbjct: 315 gggaggacgtagccatcatagacgcatgcttcctggacgtccctgatggccgcctgttcc 256 Query: 392 acaatgttcctcaccaagaaacgcttgatagccttgtccttggggcagcacttggcgcag 451 || |||||||||||| || | |||||| |||||||||||||||||||||||||||||| Sbjct: 255 acgatgttcctcacctgaaacctcttgatcgccttgtccttggggcagcacttggcgcag 196 Query: 452 ttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccgccgtt 507 || ||||| |||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 195 tttgagcaccggatgtacttgacgtgaccgcggccatgcttgttgcggccgccgtt 140
>gb|BT016216.1| Zea mays clone Contig49 mRNA sequence Length = 749 Score = 178 bits (90), Expect = 1e-41 Identities = 237/286 (82%) Strand = Plus / Plus Query: 212 tccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggaca 271 |||||||||||||| |||| ||| |||| |||| ||| | ||||||||||| ||||| Sbjct: 464 tccctgcgcctgaagcgctccggcggcttgcggtccctgcgcttctcacgggatcggacg 523 Query: 272 cggacaatgtgagcatggatggcacaagaaacacagtggtgcaccttggcatacagcttg 331 ||||| |||||||| ||||| || || || || ||||||||||||||||| |||||||| Sbjct: 524 cggacgatgtgagcgtggatcgcgcacgagacgcagtggtgcaccttggcgtacagcttc 583 Query: 332 gggagaacatatccatcatgcacacaagcctcctgcacatctctcacagcagcctgctcc 391 ||||| || | ||||||| || || || ||||| || || || | || ||||| ||| Sbjct: 584 gggaggacggaaccatcatagacgcatgcttcctggacgtccctgatggccgcctgttcc 643 Query: 392 acaatgttcctcaccaagaaacgcttgatagccttgtccttggggcagcacttggcgcag 451 || |||||||||||| || | |||||| |||||||||||||||||||||||||||||| Sbjct: 644 acgatgttcctcacctgaaacctcttgatcgccttgtccttggggcagcacttggcgcag 703 Query: 452 ttggagcagcggatgtacttgacatggccgcggccgtgcttgttgc 497 || ||||| |||||||||||||| || |||||||| |||||||||| Sbjct: 704 tttgagcaccggatgtacttgacgtgaccgcggccatgcttgttgc 749
>gb|AF457935.1| Zea mays clone cho1c.pk003.k1, mRNA sequence Length = 554 Score = 174 bits (88), Expect = 2e-40 Identities = 217/261 (83%) Strand = Plus / Minus Query: 267 ggacacggacaatgtgagcatggatggcacaagaaacacagtggtgcaccttggcataca 326 |||| ||||| |||||||| || || || || || || ||||||||||||||||| |||| Sbjct: 287 ggacgcggacgatgtgagcgtgnatcgcgcacgagacgcagtggtgcaccttggcgtaca 228 Query: 327 gcttggggagaacatatccatcatgcacacaagcctcctgcacatctctcacagcagcct 386 |||| ||||| || || |||| || || || || ||||| || || || | || |||| Sbjct: 227 gcttcgggaggacgtanccatnatagacgcatgcttcctggacgtccctgatggccgcct 168 Query: 387 gctccacaatgttcctcaccaagaaacgcttgatagccttgtccttggggcagcacttgg 446 | ||||| |||||||||||| || | |||||| ||||||||||||||||||||||||| Sbjct: 167 gttccacgatgttcctcacctgaaacctcttgatcgccttgtccttggggcagcacttgg 108 Query: 447 cgcagttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccgccgt 506 ||||||| ||||| |||||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 107 cgcagtttgagcaccggatgtacttgacgtgaccgcggccatgcttgttgcggccgccgt 48 Query: 507 tcctccgcttgaacgtcatgg 527 | | |||||||| ||||||| Sbjct: 47 tgcggcgcttgaaggtcatgg 27
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 157 bits (79), Expect = 5e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 429 ccttggggcagcacttggcgcagttggagcagcggatgtacttgacatggccgcggccgt 488 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 27234 ccttggggcagcacttggcgcagttggagcagcggatgtacttcacatggccgcggccat 27293 Query: 489 gcttgttgcggccgccgttcctccgcttgaa 519 |||||||||||||||||||||| |||||||| Sbjct: 27294 gcttgttgcggccgccgttcctgcgcttgaa 27324 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 253 gttctcacgggagcggacacggacaatgtgagcatggatggcacaagaaacacagtggtg 312 |||||| ||||||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 26840 gttctcgcgggagcggacacggacgatgtgggcgtggatggcgcaggagacgcagtgatg 26899 Query: 313 caccttggcatacagcttggggagaacatatcc 345 |||||||| |||||||| ||||| || ||||| Sbjct: 26900 gaccttggcgtacagcttcgggaggacgtatcc 26932 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 383 gcctgctccacaatgttcctcaccaagaaacgcttgatagccttgtcct 431 |||||||| || |||||||||||| ||| | |||||| |||||||||| Sbjct: 27065 gcctgctcgacgatgttcctcacctggaacctcttgatggccttgtcct 27113
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 157 bits (79), Expect = 5e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 429 ccttggggcagcacttggcgcagttggagcagcggatgtacttgacatggccgcggccgt 488 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 23341698 ccttggggcagcacttggcgcagttggagcagcggatgtacttcacatggccgcggccat 23341757 Query: 489 gcttgttgcggccgccgttcctccgcttgaa 519 |||||||||||||||||||||| |||||||| Sbjct: 23341758 gcttgttgcggccgccgttcctgcgcttgaa 23341788 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 253 gttctcacgggagcggacacggacaatgtgagcatggatggcacaagaaacacagtggtg 312 |||||| ||||||||||||||||| ||||| || |||||||| || || || ||||| || Sbjct: 23341304 gttctcgcgggagcggacacggacgatgtgggcgtggatggcgcaggagacgcagtgatg 23341363 Query: 313 caccttggcatacagcttggggagaacatatcc 345 |||||||| |||||||| ||||| || ||||| Sbjct: 23341364 gaccttggcgtacagcttcgggaggacgtatcc 23341396 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cacttggcgcagttggagcag 460 ||||||||||||||||||||| Sbjct: 28291172 cacttggcgcagttggagcag 28291152 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 383 gcctgctccacaatgttcctcaccaagaaacgcttgatagccttgtcct 431 |||||||| || |||||||||||| ||| | |||||| |||||||||| Sbjct: 23341529 gcctgctcgacgatgttcctcacctggaacctcttgatggccttgtcct 23341577 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cacaagaaacacagtggtgc 313 |||||||||||||||||||| Sbjct: 25336608 cacaagaaacacagtggtgc 25336627
>dbj|AK109021.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B01, full insert sequence Length = 974 Score = 143 bits (72), Expect = 8e-31 Identities = 180/214 (84%), Gaps = 4/214 (1%) Strand = Plus / Minus Query: 221 ctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggacacggacaatg 280 |||||| ||||||| |||||| |||||||||||||| | ||||| |||| ||||||| Sbjct: 400 ctgaaatgctgcggaagctcacaattcctcctgttctcgcaagagcgaacactgacaatg 341 Query: 281 tgagcatggatggca---caagaaacacagtggtgcaccttggcatacagcttggggaga 337 |||||||| || ||| || ||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 340 tgagcatgaattgcattccatgaaacgcagtgatgcacctttgcatacagcttaggaaga 281 Query: 338 acatatccatcatgcacacaagcctcctgcacatctctc-acagcagcctgctccacaat 396 || | |||||||| ||||||||||| |||| ||||| || ||||||||||| ||||| Sbjct: 280 acgtgaccatcatgtacacaagcctcttgcatatctcaagactgcagcctgctcaacaat 221 Query: 397 gttcctcaccaagaaacgcttgatagccttgtcc 430 ||||||||||||||||| ||||||||||||||| Sbjct: 220 attcctcaccaagaaacggttgatagccttgtcc 187 Score = 69.9 bits (35), Expect = 9e-09 Identities = 70/82 (85%), Gaps = 6/82 (7%) Strand = Plus / Minus Query: 452 ttggagcagcggatgtacttgacatg------gccgcggccgtgcttgttgcggccgccg 505 |||||||||||||| |||||||| || ||||||||||||||||||||| ||||| Sbjct: 146 ttggagcagcggatctacttgacgtggccgcggccgcggccgtgcttgttgcgcccgcca 87 Query: 506 ttcctccgcttgaacgtcatgg 527 ||||||||||| ||||||||| Sbjct: 86 ttcctccgcttccacgtcatgg 65
>gb|AF112440.1|AF112440 Pisum sativum ribosomal protein S26 (RPS26) mRNA, complete cds Length = 610 Score = 139 bits (70), Expect = 1e-29 Identities = 150/174 (86%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 353 acacaagcctcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaa 412 |||||||| ||||| |||||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 204 acacaagcttcctgaacatctctaacagcagcctgttcaacaatgttcctcac-aagaaa 146 Query: 413 -cgcttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtactt 471 | |||||| ||||| |||||||| ||||| || ||||||||||||| |||||| |||| Sbjct: 145 tctcttgattgccttatccttgggacagcattttccgcagttggagcaacggatgaactt 86 Query: 472 gacatggccgcggccgtgcttgttgcggccgccgttcctccgcttgaacgtcat 525 ||||||||| ||||| |||||||| || || || ||||| |||||||| ||||| Sbjct: 85 gacatggccacggccatgcttgttacgtcctccattcctacgcttgaaagtcat 32
>gb|BT013046.1| Lycopersicon esculentum clone 114301F, mRNA sequence Length = 637 Score = 135 bits (68), Expect = 2e-28 Identities = 146/172 (84%) Strand = Plus / Minus Query: 354 cacaagcctcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaac 413 ||||||| ||||| ||||| | |||||||| || || |||||||||||||| | ||| | Sbjct: 233 cacaagcttcctgaacatcacgtacagcagcttgttcaacaatgttcctcacaaggaatc 174 Query: 414 gcttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttga 473 |||||| ||||||||||| |||||||| ||| ||||||| |||||||||||| |||||| Sbjct: 173 tcttgatggccttgtccttagggcagcatttgccgcagttagagcagcggatgaacttga 114 Query: 474 catggccgcggccgtgcttgttgcggccgccgttcctccgcttgaacgtcat 525 ||||||| || || |||||||| || || |||||||| |||||||| ||||| Sbjct: 113 catggccacgtccatgcttgttacgacctccgttccttcgcttgaaagtcat 62
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 2e-28 Identities = 74/76 (97%) Strand = Plus / Minus Query: 429 ccttggggcagcacttggcgcagttggagcagcggatgtacttgacatggccgcggccgt 488 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 35147221 ccttggggcagcacttggcgcagttggagcagcggatgtacttgacgtggccgcgaccgt 35147162 Query: 489 gcttgttgcggccgcc 504 |||||||||||||||| Sbjct: 35147161 gcttgttgcggccgcc 35147146 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 242 cggttcctcctgttctcacgggagcggacacggacaatgtgagcatggatggcacaagaa 301 |||| ||||| |||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 35147690 cggtccctccggttctcacgggagcggacacggacgatgtgagcatggattgcacaggac 35147631 Query: 302 acacagtggtgcaccttggcatacagcttggggagaacatatcc 345 |||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 35147630 acacagtgatgcaccttggcgtaaagcttggggagaacgtatcc 35147587 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 383 gcctgctccacaatgttcctcaccaagaaacgcttgatagccttgtcct 431 ||||||||||| |||||||||||| || | |||||| |||||||||| Sbjct: 35147368 gcctgctccacgatgttcctcacctgaaacctcttgatcgccttgtcct 35147320
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 135 bits (68), Expect = 2e-28 Identities = 74/76 (97%) Strand = Plus / Minus Query: 429 ccttggggcagcacttggcgcagttggagcagcggatgtacttgacatggccgcggccgt 488 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 26305 ccttggggcagcacttggcgcagttggagcagcggatgtacttgacgtggccgcgaccgt 26246 Query: 489 gcttgttgcggccgcc 504 |||||||||||||||| Sbjct: 26245 gcttgttgcggccgcc 26230 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 242 cggttcctcctgttctcacgggagcggacacggacaatgtgagcatggatggcacaagaa 301 |||| ||||| |||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 26774 cggtccctccggttctcacgggagcggacacggacgatgtgagcatggattgcacaggac 26715 Query: 302 acacagtggtgcaccttggcatacagcttggggagaacatatcc 345 |||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 26714 acacagtgatgcaccttggcgtaaagcttggggagaacgtatcc 26671 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 383 gcctgctccacaatgttcctcaccaagaaacgcttgatagccttgtcct 431 ||||||||||| |||||||||||| || | |||||| |||||||||| Sbjct: 26452 gcctgctccacgatgttcctcacctgaaacctcttgatcgccttgtcct 26404
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 135 bits (68), Expect = 2e-28 Identities = 74/76 (97%) Strand = Plus / Minus Query: 429 ccttggggcagcacttggcgcagttggagcagcggatgtacttgacatggccgcggccgt 488 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 154371 ccttggggcagcacttggcgcagttggagcagcggatgtacttgacgtggccgcgaccgt 154312 Query: 489 gcttgttgcggccgcc 504 |||||||||||||||| Sbjct: 154311 gcttgttgcggccgcc 154296 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 242 cggttcctcctgttctcacgggagcggacacggacaatgtgagcatggatggcacaagaa 301 |||| ||||| |||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 154840 cggtccctccggttctcacgggagcggacacggacgatgtgagcatggattgcacaggac 154781 Query: 302 acacagtggtgcaccttggcatacagcttggggagaacatatcc 345 |||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 154780 acacagtgatgcaccttggcgtaaagcttggggagaacgtatcc 154737 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 383 gcctgctccacaatgttcctcaccaagaaacgcttgatagccttgtcct 431 ||||||||||| |||||||||||| || | |||||| |||||||||| Sbjct: 154518 gcctgctccacgatgttcctcacctgaaacctcttgatcgccttgtcct 154470
>ref|NM_129621.2| Arabidopsis thaliana structural constituent of ribosome AT2G40590 mRNA, complete cds Length = 636 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| |||||||| | ||||||||||||||||||||||||||| | ||| | ||| || Sbjct: 234 tcctgaacatctctaatagcagcctgctccacaatgttcctcacaatgaacctcttaatg 175 Query: 422 gccttgtccttggggcagcacttggcgcagttggagca 459 ||||||||||| |||||||| ||| ||||||||||||| Sbjct: 174 gccttgtccttagggcagcatttgccgcagttggagca 137
>gb|BT001026.1| Arabidopsis thaliana At2g40590/T2P4.6 mRNA, complete cds Length = 396 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| |||||||| | ||||||||||||||||||||||||||| | ||| | ||| || Sbjct: 164 tcctgaacatctctaatagcagcctgctccacaatgttcctcacaatgaacctcttaatg 105 Query: 422 gccttgtccttggggcagcacttggcgcagttggagca 459 ||||||||||| |||||||| ||| ||||||||||||| Sbjct: 104 gccttgtccttagggcagcatttgccgcagttggagca 67
>gb|AY127000.1| Arabidopsis thaliana At2g40590/T2P4.6 mRNA, complete cds Length = 640 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| |||||||| | ||||||||||||||||||||||||||| | ||| | ||| || Sbjct: 236 tcctgaacatctctaatagcagcctgctccacaatgttcctcacaatgaacctcttaatg 177 Query: 422 gccttgtccttggggcagcacttggcgcagttggagca 459 ||||||||||| |||||||| ||| ||||||||||||| Sbjct: 176 gccttgtccttagggcagcatttgccgcagttggagca 139
>ref|NM_129613.2| Arabidopsis thaliana structural constituent of ribosome AT2G40510 mRNA, complete cds Length = 660 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| |||||||| | ||||||||||||||||||||||||||| | ||| | ||| || Sbjct: 235 tcctgaacatctctaatagcagcctgctccacaatgttcctcacaatgaacctcttaatg 176 Query: 422 gccttgtccttggggcagcacttggcgcagttggagca 459 ||||||||||||||||| || ||| | ||||||||||| Sbjct: 175 gccttgtccttggggcaacatttgccacagttggagca 138
>gb|BT020291.1| Arabidopsis thaliana At2g40510 gene, complete cds Length = 417 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| |||||||| | ||||||||||||||||||||||||||| | ||| | ||| || Sbjct: 179 tcctgaacatctctaatagcagcctgctccacaatgttcctcacaatgaacctcttaatg 120 Query: 422 gccttgtccttggggcagcacttggcgcagttggagca 459 ||||||||||||||||| || ||| | ||||||||||| Sbjct: 119 gccttgtccttggggcaacatttgccacagttggagca 82
>gb|AY099673.1| Arabidopsis thaliana 40S ribosomal protein S26 (At2g40510) mRNA, complete cds Length = 607 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| |||||||| | ||||||||||||||||||||||||||| | ||| | ||| || Sbjct: 235 tcctgaacatctctaatagcagcctgctccacaatgttcctcacaatgaacctcttaatg 176 Query: 422 gccttgtccttggggcagcacttggcgcagttggagca 459 ||||||||||||||||| || ||| | ||||||||||| Sbjct: 175 gccttgtccttggggcaacatttgccacagttggagca 138
>emb|BX842037.1|CNS09Y8A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZA01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 600 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| |||||||| | ||||||||||||||||||||||||||| | ||| | ||| || Sbjct: 218 tcctgaacatctctaatagcagcctgctccacaatgttcctcacaatgaacctcttaatg 159 Query: 422 gccttgtccttggggcagcacttggcgcagttggagca 459 ||||||||||||||||| || ||| | ||||||||||| Sbjct: 158 gccttgtccttggggcaacatttgccacagttggagca 121
>gb|AY086823.1| Arabidopsis thaliana clone 28121 mRNA, complete sequence Length = 610 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| |||||||| | ||||||||||||||||||||||||||| | ||| | ||| || Sbjct: 231 tcctgaacatctctaatagcagcctgctccacaatgttcctcacaatgaacctcttaatg 172 Query: 422 gccttgtccttggggcagcacttggcgcagttggagca 459 ||||||||||||||||| || ||| | ||||||||||| Sbjct: 171 gccttgtccttggggcaacatttgccacagttggagca 134
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 1e-14 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 344 ccatcatgcacacaagcctcctgcacatctctc-acagcagcctgctccacaatgttcct 402 |||||||| ||||||||||| |||| ||||| || ||||||||||| ||||| ||||| Sbjct: 33912326 ccatcatgtacacaagcctcttgcatatctcaagactgcagcctgctcaacaatattcct 33912267 Query: 403 caccaagaaacgcttgatagccttgtcct 431 |||||||||||| |||||||||||||||| Sbjct: 33912266 caccaagaaacggttgatagccttgtcct 33912238 Score = 79.8 bits (40), Expect = 1e-11 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 213 ccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggacac 272 |||||| ||||||| ||||||| |||||| |||||||||||||| | ||||| |||| Sbjct: 33912545 ccctgcacctgaaatgctgcggaagctcacaattcctcctgttctcgcaagagcgaacac 33912486 Query: 273 ggacaatgtgagcatggatggca---caagaaacacagtggtgcaccttggcatacagct 329 ||||||||||||||| || ||| || ||||| ||||| |||||||| |||||||||| Sbjct: 33912485 tgacaatgtgagcatgaattgcattccatgaaacgcagtgatgcacctttgcatacagct 33912426 Query: 330 tggggagaac 339 | || ||||| Sbjct: 33912425 taggaagaac 33912416 Score = 63.9 bits (32), Expect = 6e-07 Identities = 61/71 (85%), Gaps = 6/71 (8%) Strand = Plus / Minus Query: 452 ttggagcagcggatgtacttgacat------ggccgcggccgtgcttgttgcggccgccg 505 |||||||||||||| |||||||| | |||||||||||||||||||||| ||||| Sbjct: 33911757 ttggagcagcggatctacttgacgtggccgcggccgcggccgtgcttgttgcgcccgcca 33911698 Query: 506 ttcctccgctt 516 ||||||||||| Sbjct: 33911697 ttcctccgctt 33911687
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 1e-14 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 344 ccatcatgcacacaagcctcctgcacatctctc-acagcagcctgctccacaatgttcct 402 |||||||| ||||||||||| |||| ||||| || ||||||||||| ||||| ||||| Sbjct: 34002798 ccatcatgtacacaagcctcttgcatatctcaagactgcagcctgctcaacaatattcct 34002739 Query: 403 caccaagaaacgcttgatagccttgtcct 431 |||||||||||| |||||||||||||||| Sbjct: 34002738 caccaagaaacggttgatagccttgtcct 34002710 Score = 79.8 bits (40), Expect = 1e-11 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 213 ccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggacac 272 |||||| ||||||| ||||||| |||||| |||||||||||||| | ||||| |||| Sbjct: 34003017 ccctgcacctgaaatgctgcggaagctcacaattcctcctgttctcgcaagagcgaacac 34002958 Query: 273 ggacaatgtgagcatggatggca---caagaaacacagtggtgcaccttggcatacagct 329 ||||||||||||||| || ||| || ||||| ||||| |||||||| |||||||||| Sbjct: 34002957 tgacaatgtgagcatgaattgcattccatgaaacgcagtgatgcacctttgcatacagct 34002898 Query: 330 tggggagaac 339 | || ||||| Sbjct: 34002897 taggaagaac 34002888 Score = 63.9 bits (32), Expect = 6e-07 Identities = 61/71 (85%), Gaps = 6/71 (8%) Strand = Plus / Minus Query: 452 ttggagcagcggatgtacttgacat------ggccgcggccgtgcttgttgcggccgccg 505 |||||||||||||| |||||||| | |||||||||||||||||||||| ||||| Sbjct: 34002229 ttggagcagcggatctacttgacgtggccgcggccgcggccgtgcttgttgcgcccgcca 34002170 Query: 506 ttcctccgctt 516 ||||||||||| Sbjct: 34002169 ttcctccgctt 34002159
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 89.7 bits (45), Expect = 1e-14 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 344 ccatcatgcacacaagcctcctgcacatctctc-acagcagcctgctccacaatgttcct 402 |||||||| ||||||||||| |||| ||||| || ||||||||||| ||||| ||||| Sbjct: 145365 ccatcatgtacacaagcctcttgcatatctcaagactgcagcctgctcaacaatattcct 145424 Query: 403 caccaagaaacgcttgatagccttgtcct 431 |||||||||||| |||||||||||||||| Sbjct: 145425 caccaagaaacggttgatagccttgtcct 145453 Score = 79.8 bits (40), Expect = 1e-11 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 213 ccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggacac 272 |||||| ||||||| ||||||| |||||| |||||||||||||| | ||||| |||| Sbjct: 145146 ccctgcacctgaaatgctgcggaagctcacaattcctcctgttctcgcaagagcgaacac 145205 Query: 273 ggacaatgtgagcatggatggca---caagaaacacagtggtgcaccttggcatacagct 329 ||||||||||||||| || ||| || ||||| ||||| |||||||| |||||||||| Sbjct: 145206 tgacaatgtgagcatgaattgcattccatgaaacgcagtgatgcacctttgcatacagct 145265 Query: 330 tggggagaac 339 | || ||||| Sbjct: 145266 taggaagaac 145275 Score = 63.9 bits (32), Expect = 6e-07 Identities = 61/71 (85%), Gaps = 6/71 (8%) Strand = Plus / Plus Query: 452 ttggagcagcggatgtacttgacat------ggccgcggccgtgcttgttgcggccgccg 505 |||||||||||||| |||||||| | |||||||||||||||||||||| ||||| Sbjct: 145934 ttggagcagcggatctacttgacgtggccgcggccgcggccgtgcttgttgcgcccgcca 145993 Query: 506 ttcctccgctt 516 ||||||||||| Sbjct: 145994 ttcctccgctt 146004
>ref|XM_470096.1| Oryza sativa (japonica cultivar-group), mRNA Length = 327 Score = 79.8 bits (40), Expect = 1e-11 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 213 ccctgcgcctgaaacgctgcgggggctcacggttcctcctgttctcacgggagcggacac 272 |||||| ||||||| ||||||| |||||| |||||||||||||| | ||||| |||| Sbjct: 313 ccctgcacctgaaatgctgcggaagctcacaattcctcctgttctcgcaagagcgaacac 254 Query: 273 ggacaatgtgagcatggatggca---caagaaacacagtggtgcaccttggcatacagct 329 ||||||||||||||| || ||| || ||||| ||||| |||||||| |||||||||| Sbjct: 253 tgacaatgtgagcatgaattgcattccatgaaacgcagtgatgcacctttgcatacagct 194 Query: 330 tggggagaac 339 | || ||||| Sbjct: 193 taggaagaac 184 Score = 77.8 bits (39), Expect = 4e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 353 acacaagcctcctgcacatctc-tcacagcagcctgctccacaatgttcctcaccaagaa 411 ||||||||||| |||| ||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 180 acacaagcctcttgcatatctcaagactgcagcctgctcaacaatattcctcaccaagaa 121 Query: 412 acgcttgatagccttgtcc 430 ||| ||||||||||||||| Sbjct: 120 acggttgatagccttgtcc 102 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 452 ttggagcagcggatgtacttgacatggccgcggccg 487 |||||||||||||| |||||||| |||||||||||| Sbjct: 61 ttggagcagcggatctacttgacgtggccgcggccg 26 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 477 ggccgcggccgtgcttgttgcggccgcc 504 |||||||||||||||||||||| ||||| Sbjct: 30 ggccgcggccgtgcttgttgcgcccgcc 3
>gb|DQ455286.1| Medicago truncatula cDNA-AFLP fragment BT11M32_219 sequence Length = 235 Score = 75.8 bits (38), Expect = 2e-10 Identities = 124/150 (82%), Gaps = 2/150 (1%) Strand = Plus / Plus Query: 353 acacaagcctcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaa 412 |||||||| || || |||||||| || ||||| || || ||||||||||| || |||||| Sbjct: 73 acacaagcttcttgtacatctctaactgcagcttgttcaacaatgttcctaac-aagaaa 131 Query: 413 cg-cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtactt 471 | ||||||||||||||||||||| ||||| || | ||||||||||| || ||| | || Sbjct: 132 cctcttgatagccttgtccttgggacagcatttaccacagttggagcaacgaatgaattt 191 Query: 472 gacatggccgcggccgtgcttgttgcggcc 501 ||||||||| || || || ||||| ||||| Sbjct: 192 gacatggccacgaccatgtttgttacggcc 221
>ref|XM_323904.1| Neurospora crassa OR74A hypothetical protein (NCU04552.1) partial mRNA Length = 360 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 448 gcagttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccg 502 ||||||||||||||||||| |||||| ||||||||||| | ||||||||||||| Sbjct: 78 gcagttggagcagcggatgggcttgacgtggccgcggcccttcttgttgcggccg 24
>ref|XM_950850.1| Neurospora crassa OR74A hypothetical protein (NCU04552.1) partial mRNA Length = 360 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 448 gcagttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccg 502 ||||||||||||||||||| |||||| ||||||||||| | ||||||||||||| Sbjct: 78 gcagttggagcagcggatgggcttgacgtggccgcggcccttcttgttgcggccg 24
>emb|X55637.1|NCRPSSU N. crassa mRNA for a ribosomal protein Length = 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 448 gcagttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccg 502 ||||||||||||||||||| |||||| ||||||||||| | ||||||||||||| Sbjct: 124 gcagttggagcagcggatgggcttgacgtggccgcggcccttcttgttgcggccg 70
>gb|M95597.1|NEUCRP5A Neurospora crassa ribosomal protein (crp-5) gene, 5' end Length = 1616 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 448 gcagttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccg 502 ||||||||||||||||||| |||||| ||||||||||| | ||||||||||||| Sbjct: 1412 gcagttggagcagcggatgggcttgacgtggccgcggcccttcttgttgcggccg 1358
>gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4 map CIC10A06, complete sequence Length = 84675 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| |||||||| | ||||||||||||||||||||||||||| | ||| | ||| || Sbjct: 44407 tcctgaacatctctaatagcagcctgctccacaatgttcctcacaatgaacctcttaatg 44466 Query: 422 gccttgtcct 431 |||||||||| Sbjct: 44467 gccttgtcct 44476 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 362 tcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgata 421 ||||| |||||||| | ||||||||||||||||||||||||||| | ||| | ||| || Sbjct: 17259 tcctgaacatctctaatagcagcctgctccacaatgttcctcacaatgaacctcttaatg 17200 Query: 422 gccttgtcct 431 |||||||||| Sbjct: 17199 gccttgtcct 17190
>emb|BX822864.1|CNS0A737 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 610 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 368 acatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgatagccttg 427 |||||||| | |||||||||||| ||||||||||| || || || | ||| || |||||| Sbjct: 214 acatctctaatagcagcctgctcaacaatgttccttacgaaaaatctcttaatcgccttg 155 Query: 428 tccttggggca 438 ||||||||||| Sbjct: 154 tccttggggca 144
>gb|AF084202.1|AF084202 Medicago sativa clone MS56 unknown mRNA Length = 697 Score = 61.9 bits (31), Expect = 2e-06 Identities = 105/127 (82%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 353 acacaagcctcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaa 412 ||||| || ||||| |||||||| || ||||| || || ||||||||||| || |||||| Sbjct: 221 acacatgcttcctgaacatctctaactgcagcttgttcaacaatgttcctaac-aagaaa 163 Query: 413 cg-cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtactt 471 | |||||| |||||||||||||| ||||| || | ||||||||||| || ||| | || Sbjct: 162 cctcttgattgccttgtccttgggacagcatttaccacagttggagcaacgaatgaattt 103 Query: 472 gacatgg 478 ||||||| Sbjct: 102 gacatgg 96
>ref|NM_115492.2| Arabidopsis thaliana structural constituent of ribosome AT3G56340 mRNA, complete cds Length = 638 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 368 acatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgatagccttg 427 |||||||| | |||||||||||| ||||||||||| || | || | ||| || |||||| Sbjct: 231 acatctctaatagcagcctgctcaacaatgttccttacgataaatctcttaatcgccttg 172 Query: 428 tccttggggcagcactt 444 ||||||||||| ||||| Sbjct: 171 tccttggggcaacactt 155
>ref|XM_658227.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S26E (AN5715.2), mRNA Length = 360 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 446 gcgcagttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcggccg 502 ||||||||||||||||| | | ||| || ||||||||||||| ||||||||||||| Sbjct: 80 gcgcagttggagcagcgcacgggcttaacgtggccgcggccgttcttgttgcggccg 24
>ref|XM_745333.1| Aspergillus fumigatus Af293 ribosomal protein S26e (Afu1g06770) partial mRNA Length = 360 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 446 gcgcagttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcg 498 ||||||||||||||||| | | |||||| ||||||||||||| ||||||||| Sbjct: 80 gcgcagttggagcagcgcacgggcttgacgtggccgcggccgttcttgttgcg 28
>gb|AY133664.1| Arabidopsis thaliana AT3g56340/F18O21_300 mRNA, complete cds Length = 393 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 368 acatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgatagccttg 427 |||||||| | |||||||||||| ||||||||||| || | || | ||| || |||||| Sbjct: 158 acatctctaatagcagcctgctcaacaatgttccttacgataaatctcttaatcgccttg 99 Query: 428 tccttggggcagcactt 444 ||||||||||| ||||| Sbjct: 98 tccttggggcaacactt 82
>gb|AY039886.1| Arabidopsis thaliana AT3g56340/F18O21_300 mRNA, complete cds Length = 602 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 368 acatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgatagccttg 427 |||||||| | |||||||||||| ||||||||||| || | || | ||| || |||||| Sbjct: 231 acatctctaatagcagcctgctcaacaatgttccttacgataaatctcttaatcgccttg 172 Query: 428 tccttggggcagcactt 444 ||||||||||| ||||| Sbjct: 171 tccttggggcaacactt 155
>gb|AF079900.1|AF079900 Streptomyces rimosus tetracycline efflux protein (otrB) gene, complete cds Length = 1947 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 109 agcaggggcgccaggaacagcgccagcgcc 138 ||||||||| |||||||||||||||||||| Sbjct: 737 agcaggggcaccaggaacagcgccagcgcc 708
>gb|AF061335.1|AF061335 Streptomyces rimosus oxytetracycline exporter (otrB) gene, complete cds Length = 1611 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 109 agcaggggcgccaggaacagcgccagcgcc 138 ||||||||| |||||||||||||||||||| Sbjct: 617 agcaggggcaccaggaacagcgccagcgcc 588
>gb|M20370.1|STMTETA S.rimosus tetracycline-resistance determinant (tet347) gene, complete cds Length = 2052 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 109 agcaggggcgccaggaacagcgccagcgcc 138 ||||||||| |||||||||||||||||||| Sbjct: 844 agcaggggcaccaggaacagcgccagcgcc 815
>gb|AY231816.1| Drosophila yakuba clone yak-em_RpS26 mRNA sequence Length = 342 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 ||||||||||||||||||||| ||| ||||||||||| ||| || | | ||| || Sbjct: 111 cttgatagccttgtccttgggcacgcagcgggcgcagttggtgcaacgcacgggcttcac 52 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 |||||||||| |||||||||||| || ||||| Sbjct: 51 atggccgcggttgtgcttgttgcgtcctccgtt 19
>gb|AC117596.6| Mus musculus chromosome 6, clone RP23-392K24, complete sequence Length = 233811 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 374 ctcacagcagcctgctccacaatgt 398 ||||||||||||||||||||||||| Sbjct: 61048 ctcacagcagcctgctccacaatgt 61024
>gb|DQ413194.1| Acyrthosiphon pisum isolate WHAP0011 putative ribosomal protein S26 mRNA, complete cds Length = 357 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 286 atggatggcacaagaaacacagtggtgca 314 ||||||||||||||||||||||| ||||| Sbjct: 240 atggatggcacaagaaacacagtagtgca 212
>emb|BX822379.1|CNS0A757 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 571 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 368 acatctctcacagcagcctgctccacaatgttcctcaccaagaaacgcttgatagccttg 427 |||||||| | |||||||||||| ||||||| ||| || | || | ||| || |||||| Sbjct: 204 acatctctaatagcagcctgctcaacaatgtgccttacgataaatctcttaatcgccttg 145 Query: 428 tccttggggcagcactt 444 ||||||||||| ||||| Sbjct: 144 tccttggggcaacactt 128
>emb|AJ719518.1| Gallus gallus mRNA for hypothetical protein, clone 2p17 Length = 463 Score = 48.1 bits (24), Expect = 0.034 Identities = 60/72 (83%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| || |||||||||||| ||| ||||||||||| |||||||||| || ||| Sbjct: 136 cttgatggctttgtccttggggacgcagcgggcgcagttggtgcagcggatgggctggac 77 Query: 475 atggccgcggcc 486 ||||||||||| Sbjct: 76 gtggccgcggcc 65
>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE Length = 120939 Score = 48.1 bits (24), Expect = 0.034 Identities = 68/80 (85%), Gaps = 2/80 (2%) Strand = Plus / Minus Query: 353 acacaagcctcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaa 412 |||||||| || || |||||||| || ||||| || || ||||||||||| | ||||||| Sbjct: 4740 acacaagcttcttgtacatctctaactgcagcttgttcaacaatgttcct-aacaagaaa 4682 Query: 413 -cgcttgatagccttgtcct 431 | ||||||||||||||||| Sbjct: 4681 cctcttgatagccttgtcct 4662
>emb|CT571263.1| Medicago truncatula chromosome 5 clone mte1-7c20, COMPLETE SEQUENCE Length = 127003 Score = 48.1 bits (24), Expect = 0.034 Identities = 68/80 (85%), Gaps = 2/80 (2%) Strand = Plus / Plus Query: 353 acacaagcctcctgcacatctctcacagcagcctgctccacaatgttcctcaccaagaaa 412 |||||||| || || |||||||| || ||||| || || ||||||||||| | ||||||| Sbjct: 7658 acacaagcttcttgtacatctctaactgcagcttgttcaacaatgttcct-aacaagaaa 7716 Query: 413 -cgcttgatagccttgtcct 431 | ||||||||||||||||| Sbjct: 7717 cctcttgatagccttgtcct 7736
>ref|XM_368025.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07929.4) partial mRNA Length = 360 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 448 gcagttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcg 498 |||||| ||||| |||||| |||||| ||||||||||| | ||||||||| Sbjct: 78 gcagtttgagcaacggatgggcttgacgtggccgcggcccttcttgttgcg 28
>ref|XM_755997.1| Ustilago maydis 521 hypothetical protein (UM04943.1) partial mRNA Length = 369 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 413 cgcttgatagccttgtccttggg 435 ||||||||||||||||||||||| Sbjct: 113 cgcttgatagccttgtccttggg 91
>ref|XM_572351.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH01770) partial mRNA Length = 495 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 413 cgcttgatagccttgtccttggg 435 ||||||||||||||||||||||| Sbjct: 115 cgcttgatagccttgtccttggg 93
>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21 Length = 99492 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 368 acatctctcacagcagcctgctccacaatgttcct 402 |||||||| | |||||||||||| ||||||||||| Sbjct: 95927 acatctctaatagcagcctgctcaacaatgttcct 95961
>emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T5P19 Length = 101539 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 368 acatctctcacagcagcctgctccacaatgttcct 402 |||||||| | |||||||||||| ||||||||||| Sbjct: 3781 acatctctaatagcagcctgctcaacaatgttcct 3815
>gb|AY849657.1| Magnaporthe grisea 40S ribosomal protein S26-like protein mRNA, complete cds Length = 668 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 448 gcagttggagcagcggatgtacttgacatggccgcggccgtgcttgttgcg 498 |||||| ||||| |||||| |||||| ||||||||||| | ||||||||| Sbjct: 125 gcagtttgagcaacggatgggcttgacgtggccgcggcccttcttgttgcg 75
>gb|AY618139.1| Sterkiella histriomuscorum clone UGC1O0006_F08_F genomic sequence Length = 492 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 409 gaaacgcttgatagccttgtccttgg 434 |||||||||||| ||||||||||||| Sbjct: 208 gaaacgcttgatggccttgtccttgg 183
>gb|AY617796.1| Sterkiella histriomuscorum clone UGC1O0005_K14_F genomic sequence Length = 630 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 409 gaaacgcttgatagccttgtccttgg 434 |||||||||||| ||||||||||||| Sbjct: 420 gaaacgcttgatggccttgtccttgg 445
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 gcgccaggaacagcgccagcgc 137 |||||||||||||||||||||| Sbjct: 110059 gcgccaggaacagcgccagcgc 110038
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 gcgccaggaacagcgccagcgc 137 |||||||||||||||||||||| Sbjct: 170095 gcgccaggaacagcgccagcgc 170116
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cacttggcgcagttggagcag 460 ||||||||||||||||||||| Sbjct: 75414 cacttggcgcagttggagcag 75394
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 158 ccaccagggcctccagcacggggcgggccacct 190 ||||||| || ||||||||| |||||||||||| Sbjct: 151183 ccaccagcgcttccagcacgtggcgggccacct 151215 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ttcctccgcttgaacgtcat 525 |||||||||||||||||||| Sbjct: 2327342 ttcctccgcttgaacgtcat 2327361 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ttcctccgcttgaacgtcat 525 |||||||||||||||||||| Sbjct: 2218484 ttcctccgcttgaacgtcat 2218465 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ttcctccgcttgaacgtcat 525 |||||||||||||||||||| Sbjct: 1924694 ttcctccgcttgaacgtcat 1924713 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ttcctccgcttgaacgtcat 525 |||||||||||||||||||| Sbjct: 1808751 ttcctccgcttgaacgtcat 1808770 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ttcctccgcttgaacgtcat 525 |||||||||||||||||||| Sbjct: 990576 ttcctccgcttgaacgtcat 990595 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ttcctccgcttgaacgtcat 525 |||||||||||||||||||| Sbjct: 479939 ttcctccgcttgaacgtcat 479958 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ttcctccgcttgaacgtcat 525 |||||||||||||||||||| Sbjct: 300250 ttcctccgcttgaacgtcat 300269
>emb|AM040004.1| Eucinetus sp. APV-2005 mRNA for ribosomal protein S26e (rpS26e gene) Length = 348 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 287 tggatggcacaagaaacacagtggtgcaccttggcatacagcttggggagaac 339 ||||||||||| || || |||| ||||| |||||| ||||| ||||| ||||| Sbjct: 239 tggatggcacaggacacgcagtagtgcagcttggcgtacagtttgggcagaac 187
>gb|AY118770.1| Drosophila melanogaster GH11073 full insert cDNA Length = 2355 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| ||| ||||||||||| |||||| | | ||| || Sbjct: 1885 cttgattgccttgtccttgggcacgcagcgggcgcagttggtgcagcgcacgggcttcac 1826 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 ||||||||| |||||||||||| || ||||| Sbjct: 1825 atggccgcgattgtgcttgttgcgtcctccgtt 1793
>gb|AE012331.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 239 of 460 of the complete genome Length = 11445 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ccagcaggcgcaccaccaggtccac 161 |||||||||||||| |||||||||| Sbjct: 7338 ccagcaggcgcaccgccaggtccac 7362
>dbj|AB226211.1| Aspergillus oryzae cDNA, contig sequence: AoEST3070 Length = 844 Score = 42.1 bits (21), Expect = 2.1 Identities = 66/81 (81%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| ||||||||||||||| ||| ||||||||||||||||| | | |||| Sbjct: 195 cttgatggccttgtccttggggacgcagcgagcgcagttggagcagcgcacgggcttggt 136 Query: 475 atggccgcggccgtgcttgtt 495 ||||||||||||| |||||| Sbjct: 135 gtggccgcggccgttcttgtt 115
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 ccaggtccaccagggcctccagcac 176 |||||||||||||||| |||||||| Sbjct: 668599 ccaggtccaccagggcgtccagcac 668623 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gcgccagcaggcgcaccacc 153 |||||||||||||||||||| Sbjct: 4485664 gcgccagcaggcgcaccacc 4485645
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 42.1 bits (21), Expect = 2.1 Identities = 66/81 (81%) Strand = Plus / Plus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| ||||||||||||||| ||| ||||||||||||||||| | | |||| Sbjct: 1212894 cttgatggccttgtccttggggacgcagcgagcgcagttggagcagcgcacgggcttggt 1212953 Query: 475 atggccgcggccgtgcttgtt 495 ||||||||||||| |||||| Sbjct: 1212954 gtggccgcggccgttcttgtt 1212974
>ref|NM_165253.1| Drosophila melanogaster Ribosomal protein S26 CG10305-RC, transcript variant C (RpS26), mRNA Length = 632 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| ||| ||||||||||| |||||| | | ||| || Sbjct: 178 cttgattgccttgtccttgggcacgcagcgggcgcagttggtgcagcgcacgggcttcac 119 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 ||||||||| |||||||||||| || ||||| Sbjct: 118 atggccgcgattgtgcttgttgcgtcctccgtt 86
>ref|NM_165252.1| Drosophila melanogaster Ribosomal protein S26 CG10305-RA, transcript variant A (RpS26), mRNA Length = 658 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| ||| ||||||||||| |||||| | | ||| || Sbjct: 204 cttgattgccttgtccttgggcacgcagcgggcgcagttggtgcagcgcacgggcttcac 145 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 ||||||||| |||||||||||| || ||||| Sbjct: 144 atggccgcgattgtgcttgttgcgtcctccgtt 112
>gb|AC110612.3| Homo sapiens BAC clone RP11-416B16 from 4, complete sequence Length = 158472 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 aaaactagaatagttcaatat 38 ||||||||||||||||||||| Sbjct: 142426 aaaactagaatagttcaatat 142406
>ref|NM_078871.4| Drosophila melanogaster Ribosomal protein S26 CG10305-RB, transcript variant B (RpS26), mRNA Length = 661 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| ||| ||||||||||| |||||| | | ||| || Sbjct: 207 cttgattgccttgtccttgggcacgcagcgggcgcagttggtgcagcgcacgggcttcac 148 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 ||||||||| |||||||||||| || ||||| Sbjct: 147 atggccgcgattgtgcttgttgcgtcctccgtt 115
>gb|AY069761.1| Drosophila melanogaster RE01079 full length cDNA Length = 665 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| ||| ||||||||||| |||||| | | ||| || Sbjct: 204 cttgattgccttgtccttgggcacgcagcgggcgcagttggtgcagcgcacgggcttcac 145 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 ||||||||| |||||||||||| || ||||| Sbjct: 144 atggccgcgattgtgcttgttgcgtcctccgtt 112
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaacagcgccagcgccagcag 143 ||||||||||||||||||||| Sbjct: 2550070 gaacagcgccagcgccagcag 2550090
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 137 ccagcaggcgcaccaccaggtccac 161 |||||||||||||| |||||||||| Sbjct: 2274269 ccagcaggcgcaccgccaggtccac 2274245
>gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR13N02, complete sequence Length = 172479 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Plus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| ||| ||||||||||| |||||| | | ||| || Sbjct: 8905 cttgattgccttgtccttgggcacgcagcgggcgcagttggtgcagcgcacgggcttcac 8964 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 ||||||||| |||||||||||| || ||||| Sbjct: 8965 atggccgcgattgtgcttgttgcgtcctccgtt 8997
>gb|AC008184.4|AC008184 Drosophila melanogaster, chromosome 2L, region 36E5-36F2, BAC clone BACR04D05, complete sequence Length = 154730 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Plus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| ||| ||||||||||| |||||| | | ||| || Sbjct: 86426 cttgattgccttgtccttgggcacgcagcgggcgcagttggtgcagcgcacgggcttcac 86485 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 ||||||||| |||||||||||| || ||||| Sbjct: 86486 atggccgcgattgtgcttgttgcgtcctccgtt 86518
>gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68 of 83 of the complete sequence Length = 260027 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Plus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| ||| ||||||||||| |||||| | | ||| || Sbjct: 25817 cttgattgccttgtccttgggcacgcagcgggcgcagttggtgcagcgcacgggcttcac 25876 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 ||||||||| |||||||||||| || ||||| Sbjct: 25877 atggccgcgattgtgcttgttgcgtcctccgtt 25909
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 126 cagcgccagcgccagcaggcgcaccacca 154 |||||||||||||||||||| ||||||| Sbjct: 1717310 cagcgccagcgccagcaggctgaccacca 1717338
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 gcgccaggaacagcgccagcg 136 ||||||||||||||||||||| Sbjct: 1721648 gcgccaggaacagcgccagcg 1721668
>emb|X13625.2|DMRPS26 Drosophila melanogaster mRNA for putative ribosomal protein S31 Length = 567 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| ||| ||||||||||| |||||| | | ||| || Sbjct: 168 cttgattgccttgtccttgggcacgcagcgggcgcagttggtgcagcgcacgggcttcac 109 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 ||||||||| |||||||||||| || ||||| Sbjct: 108 atggccgcgattgtgcttgttgcgtcctccgtt 76
>emb|X14247.1|DMRPS31 Drosophila melanogaster gene for putative ribosomal protein S31 Length = 780 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| ||| ||||||||||| |||||| | | ||| || Sbjct: 337 cttgattgccttgtccttgggcacgcagcgggcgcagttggtgcagcgcacgggcttcac 278 Query: 475 atggccgcggccgtgcttgttgcggccgccgtt 507 ||||||||| |||||||||||| || ||||| Sbjct: 277 atggccgcgattgtgcttgttgcgtcctccgtt 245
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aacagcgccagcgccagcag 143 |||||||||||||||||||| Sbjct: 2318067 aacagcgccagcgccagcag 2318048
>gb|AC152884.1| Pan troglodytes chromosome 17 clone RP43-O52L01 map human ortholog 17q21.33, complete sequence Length = 162327 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 tgcacacaagcctcctgcac 369 |||||||||||||||||||| Sbjct: 120973 tgcacacaagcctcctgcac 120954
>ref|XM_512683.1| PREDICTED: Pan troglodytes LOC456056 (LOC456056), mRNA Length = 995 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 caggaacagcgccagcgccagcag 143 ||||| |||||||||||||||||| Sbjct: 65 caggagcagcgccagcgccagcag 42
>gb|BT019264.1| Zea mays clone Contig937.F mRNA sequence Length = 1112 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 114 gggcgccaggaacagcgccagcgccagcaggc 145 ||||||||||| |||||||| | ||||||||| Sbjct: 509 gggcgccaggagcagcgccaccaccagcaggc 540
>ref|NM_030622.6| Homo sapiens cytochrome P450, family 2, subfamily S, polypeptide 1 (CYP2S1), mRNA Length = 2657 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 caggaacagcgccagcgccagcag 143 ||||| |||||||||||||||||| Sbjct: 106 caggagcagcgccagcgccagcag 83
>gb|BC059532.1| Danio rerio ribosomal protein S26, like, mRNA (cDNA clone MGC:73182 IMAGE:4786707), complete cds Length = 438 Score = 40.1 bits (20), Expect = 8.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatg 466 |||||| |||||||| |||||| ||| ||||||||||| |||||||||| Sbjct: 117 cttgatggccttgtctttggggacgcagcgggcgcagttggtgcagcggatg 66
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cacaagaaacacagtggtgc 313 |||||||||||||||||||| Sbjct: 71212 cacaagaaacacagtggtgc 71231
>gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, complete sequence Length = 160429 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 caccaggtccaccagggcctccag 173 |||||||||||||||| ||||||| Sbjct: 9056 caccaggtccaccaggccctccag 9033
>ref|XM_583780.2| PREDICTED: Bos taurus similar to beta-1,4-mannosyltransferase (LOC507210), partial mRNA Length = 1307 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 109 agcaggggcgccaggaacagcgccagcgccagcagg 144 ||||| |||| ||||||||| | ||||||||||||| Sbjct: 56 agcagcggcggcaggaacagggacagcgccagcagg 21
>ref|NM_007734.1| Mus musculus procollagen, type IV, alpha 3 (Col4a3), mRNA Length = 7765 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 caccaggtccaccagggcctccag 173 |||||||||||||||| ||||||| Sbjct: 1643 caccaggtccaccaggccctccag 1666
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence Length = 203478 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 caccaggtccaccagggcctccag 173 |||||||||||||||| ||||||| Sbjct: 24227 caccaggtccaccaggccctccag 24250
>gb|AY657573.1| Synthetic construct Peudomonas aeruginosa clone FLH041006.01F PA0785 gene, partial cds Length = 639 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcgccagcgccagcaggcgc 147 |||||||||||||||||||| Sbjct: 628 gcgccagcgccagcaggcgc 609
>ref|XM_457166.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B04565g) partial mRNA Length = 360 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 tggatggcacaagaaacacagtggtgca 314 |||||||||||||| ||||||| ||||| Sbjct: 239 tggatggcacaagagacacagtagtgca 212
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 caggaacagcgccagcgccagcag 143 ||||| |||||||||||||||||| Sbjct: 395394 caggagcagcgccagcgccagcag 395371
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ttcctccgcttgaacgtcat 525 |||||||||||||||||||| Sbjct: 515987 ttcctccgcttgaacgtcat 516006 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ttcctccgcttgaacgtcat 525 |||||||||||||||||||| Sbjct: 343083 ttcctccgcttgaacgtcat 343102 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ttcctccgcttgaacgtcat 525 |||||||||||||||||||| Sbjct: 89931 ttcctccgcttgaacgtcat 89950
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 caggaacagcgccagcgccagcag 143 ||||||||||| |||||||||||| Sbjct: 3463507 caggaacagcgtcagcgccagcag 3463484
>gb|BC033691.1| Homo sapiens cytochrome P450, family 2, subfamily S, polypeptide 1, mRNA (cDNA clone MGC:44853 IMAGE:5212609), complete cds Length = 2619 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 caggaacagcgccagcgccagcag 143 ||||| |||||||||||||||||| Sbjct: 68 caggagcagcgccagcgccagcag 45
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gccaggaacagcgccagcgc 137 |||||||||||||||||||| Sbjct: 2304511 gccaggaacagcgccagcgc 2304530
>ref|XM_748937.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g06020) partial mRNA Length = 2877 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 agcgccagcgccagcaggcg 146 |||||||||||||||||||| Sbjct: 63 agcgccagcgccagcaggcg 44
>gb|AY358603.1| Homo sapiens clone DNA76395 Cytochrome p450 (UNQ891) mRNA, complete cds Length = 2626 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 caggaacagcgccagcgccagcag 143 ||||| |||||||||||||||||| Sbjct: 94 caggagcagcgccagcgccagcag 71
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 cctgcgcctgaaacgctgcg 233 |||||||||||||||||||| Sbjct: 460069 cctgcgcctgaaacgctgcg 460050
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gccaggaacagcgccagcgccagc 141 ||||||| |||||||||||||||| Sbjct: 3637625 gccaggatcagcgccagcgccagc 3637602
>ref|XM_504158.1| Yarrowia lipolytica CLIB122, YALI0E19701g predicted mRNA Length = 363 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 cgcttgatagccttgtccttgggg 436 |||||||| ||||||||||||||| Sbjct: 113 cgcttgatggccttgtccttgggg 90
>emb|AJ969056.1| Triticum aestivum mRNA for glycosyltransferase (pglcat7 gene) Length = 1660 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gcgcaccaccaggtccacca 163 |||||||||||||||||||| Sbjct: 377 gcgcaccaccaggtccacca 396
>emb|BX035466.1|CNS08ZJ2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6DC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 402 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcgccagcgccagcaggcgc 147 |||||||||||||||||||| Sbjct: 380 gcgccagcgccagcaggcgc 361
>emb|BX031918.1|CNS08WSI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47CC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 626 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcgccagcgccagcaggcgc 147 |||||||||||||||||||| Sbjct: 566 gcgccagcgccagcaggcgc 547
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 cttggcgcagttggagcagc 461 |||||||||||||||||||| Sbjct: 3431223 cttggcgcagttggagcagc 3431204
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 tggatggcacaagaaacacagtggtgca 314 |||||||||||||| ||||||| ||||| Sbjct: 377305 tggatggcacaagagacacagtagtgca 377278
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cagcgccagcgccagcaggc 145 |||||||||||||||||||| Sbjct: 127602 cagcgccagcgccagcaggc 127621
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cagcgccagcaggcgcacca 151 |||||||||||||||||||| Sbjct: 102180 cagcgccagcaggcgcacca 102161
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gccaggaacagcgccagcgccagc 141 ||||||| |||||||||||||||| Sbjct: 297962 gccaggagcagcgccagcgccagc 297939
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cagcgccagcaggcgcacca 151 |||||||||||||||||||| Sbjct: 13081 cagcgccagcaggcgcacca 13062
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gccaggaacagcgccagcgccagc 141 ||||||| |||||||||||||||| Sbjct: 243450 gccaggagcagcgccagcgccagc 243427
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cagcgccagcgccagcaggc 145 |||||||||||||||||||| Sbjct: 178780 cagcgccagcgccagcaggc 178761
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cagcgccagcaggcgcacca 151 |||||||||||||||||||| Sbjct: 297984 cagcgccagcaggcgcacca 297965
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 126 cagcgccagcgccagcaggcgcaccacc 153 |||||||||||||||||| | ||||||| Sbjct: 50798 cagcgccagcgccagcagtctcaccacc 50825
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 ggcgccaggaacagcgccagcgccagca 142 |||||||| |||||||||||||||||| Sbjct: 106714 ggcgccagacacagcgccagcgccagca 106687
>emb|AL117212.1|SPAC806 S.pombe chromosome I cosmid c806 Length = 22870 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 cgcttgatagccttgtccttgggg 436 |||||||| ||||||||||||||| Sbjct: 5629 cgcttgatggccttgtccttgggg 5652
>dbj|AK027605.1| Homo sapiens cDNA FLJ14699 fis, clone NT2RP2006571, moderately similar to CYTOCHROME P450 2G1 (EC 1.14.14.1) Length = 2513 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 caggaacagcgccagcgccagcag 143 ||||| |||||||||||||||||| Sbjct: 106 caggagcagcgccagcgccagcag 83
>gb|AE011662.1| Xanthomonas axonopodis pv. citri str. 306, section 40 of 469 of the complete genome Length = 11001 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ggaacagcgccagcgccagc 141 |||||||||||||||||||| Sbjct: 676 ggaacagcgccagcgccagc 695
>ref|NM_132256.1| Drosophila melanogaster CG15350-RA (Cp7Fb), mRNA Length = 1503 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 caccttggcatacagcttgg 332 |||||||||||||||||||| Sbjct: 303 caccttggcatacagcttgg 284
>gb|AC021491.16| Homo sapiens chromosome 17, clone RP11-94C24, complete sequence Length = 175262 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tgcacacaagcctcctgcac 369 |||||||||||||||||||| Sbjct: 17028 tgcacacaagcctcctgcac 17047
>ref|NM_001018254.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC806.03c), partial mRNA Length = 363 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 cgcttgatagccttgtccttgggg 436 |||||||| ||||||||||||||| Sbjct: 113 cgcttgatggccttgtccttgggg 90
>gb|AF335278.1|AF335278 Homo sapiens cytochrome P450 2S1 (CYP2S1) mRNA, complete cds Length = 2261 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 caggaacagcgccagcgccagcag 143 ||||| |||||||||||||||||| Sbjct: 51 caggagcagcgccagcgccagcag 28
>ref|NM_200742.1| Danio rerio ribosomal protein S26, like (rps26l), mRNA Length = 438 Score = 40.1 bits (20), Expect = 8.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatg 466 |||||| |||||||| |||||| ||| ||||||||||| |||||||||| Sbjct: 117 cttgatggccttgtctttggggacgcagcgggcgcagttggtgcagcggatg 66
>gb|AC009958.3| Homo sapiens BAC clone RP11-316G9 from 2, complete sequence Length = 211201 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcacagcagcctgctccaca 394 |||||||||||||||||||| Sbjct: 163397 tcacagcagcctgctccaca 163378
>gb|AC110080.2| Homo sapiens BAC clone RP11-421K23 from 2, complete sequence Length = 172465 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcacagcagcctgctccaca 394 |||||||||||||||||||| Sbjct: 90726 tcacagcagcctgctccaca 90707
>gb|AC022354.1|AC022354 Arabidopsis thaliana chromosome 1 BAC F9I5 genomic sequence, complete sequence Length = 46335 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 attgcagcaaaaactagaatagtt 32 |||||| ||||||||||||||||| Sbjct: 12604 attgcaacaaaaactagaatagtt 12581
>gb|AC011510.7|AC011510 Homo sapiens chromosome 19 clone CTD-2195B23, complete sequence Length = 129402 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 caggaacagcgccagcgccagcag 143 ||||| |||||||||||||||||| Sbjct: 21866 caggagcagcgccagcgccagcag 21843
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gcaccaccaggtccaccagg 165 |||||||||||||||||||| Sbjct: 2579352 gcaccaccaggtccaccagg 2579333
>gb|AE004513.1| Pseudomonas aeruginosa PAO1, section 74 of 529 of the complete genome Length = 15470 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcgccagcgccagcaggcgc 147 |||||||||||||||||||| Sbjct: 10368 gcgccagcgccagcaggcgc 10349
>ref|XM_216893.3| PREDICTED: Rattus norvegicus cleavage and polyadenylation specific factor 6, 68kDa (predicted) (Cpsf6_predicted), mRNA Length = 2481 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 accaccaggtccaccagggcctcc 171 |||||||||||||| ||||||||| Sbjct: 1341 accaccaggtccactagggcctcc 1364
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 gcgccaggaacagcgccagcgcca 139 ||||| |||||||||||||||||| Sbjct: 4187591 gcgccgggaacagcgccagcgcca 4187568 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ggaacagcgccagcgccagcaggc 145 |||||||||||||| ||||||||| Sbjct: 1926381 ggaacagcgccagcaccagcaggc 1926358
>gb|AC023696.4| Drosophila melanogaster X BAC RP98-17J10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174367 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 caccttggcatacagcttgg 332 |||||||||||||||||||| Sbjct: 64445 caccttggcatacagcttgg 64426
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cagcgccagcgccagcaggc 145 |||||||||||||||||||| Sbjct: 858815 cagcgccagcgccagcaggc 858796
>dbj|AK108295.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E05, full insert sequence Length = 546 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 cgcttgatagccttgtccttgggg 436 |||||||| ||||||||||||||| Sbjct: 129 cgcttgatcgccttgtccttgggg 106
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ccaccagggcctccagcacg 177 |||||||||||||||||||| Sbjct: 158313 ccaccagggcctccagcacg 158332
>gb|AF169387.1|AF169387 Mus musculus alpha 3 collagen IV (Col4a3) mRNA, complete cds Length = 7765 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 caccaggtccaccagggcctccag 173 |||||||||||||||| ||||||| Sbjct: 1643 caccaggtccaccaggccctccag 1666
>emb|AL845306.9| Zebrafish DNA sequence from clone DKEY-217M5 in linkage group 20, complete sequence Length = 186675 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cctgcacatctctcacagca 382 |||||||||||||||||||| Sbjct: 57919 cctgcacatctctcacagca 57900
>gb|AY110541.1| Zea mays CL4825_1 mRNA sequence Length = 837 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cagcgccagcgccagcaggc 145 |||||||||||||||||||| Sbjct: 125 cagcgccagcgccagcaggc 106
>emb|X63389.1|CCRNS26MR C.cricetus mRNA for ribosomal protein S26 Length = 437 Score = 40.1 bits (20), Expect = 8.3 Identities = 59/72 (81%) Strand = Plus / Minus Query: 415 cttgatagccttgtccttggggcagcacttggcgcagttggagcagcggatgtacttgac 474 |||||| |||||||||||||| |||| ||||||||| | ||||||||| || || Sbjct: 134 cttgatggccttgtccttgggcacgcaccgggcgcagttcgtgcagcggatcggctgcac 75 Query: 475 atggccgcggcc 486 |||||||||||| Sbjct: 74 atggccgcggcc 63
>gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 of 74 of the complete sequence Length = 299633 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 caccttggcatacagcttgg 332 |||||||||||||||||||| Sbjct: 58899 caccttggcatacagcttgg 58880
>gb|AC004590.1|AC004590 Homo sapiens chromosome 17, clone hCIT.22_K_21, complete sequence Length = 135259 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 tgcacacaagcctcctgcac 369 |||||||||||||||||||| Sbjct: 59162 tgcacacaagcctcctgcac 59143
>ref|NG_000834.1| Homo sapiens immunoglobulin kappa locus, proximal V-cluster and J-C cluster (IGK-proximal) on chromosome 2 Length = 515442 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 tcacagcagcctgctccaca 394 |||||||||||||||||||| Sbjct: 92511 tcacagcagcctgctccaca 92530
>ref|NG_000833.1| Homo sapiens immunoglobulin kappa locus, distal duplicated V-cluster (IGK-distal) on chromosome 2 Length = 407661 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcacagcagcctgctccaca 394 |||||||||||||||||||| Sbjct: 315595 tcacagcagcctgctccaca 315576
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 ccaccaggtccaccagggcctcca 172 ||||||| |||||||||||||||| Sbjct: 1638372 ccaccagctccaccagggcctcca 1638349
>dbj|AP001235.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos607/7B8 Length = 8421 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 tcacagcagcctgctccaca 394 |||||||||||||||||||| Sbjct: 4434 tcacagcagcctgctccaca 4453
>dbj|AP001226.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos237 Length = 33101 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcacagcagcctgctccaca 394 |||||||||||||||||||| Sbjct: 25347 tcacagcagcctgctccaca 25328 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,082,500 Number of Sequences: 3902068 Number of extensions: 4082500 Number of successful extensions: 88695 Number of sequences better than 10.0: 155 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 86248 Number of HSP's gapped (non-prelim): 2419 length of query: 610 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 587 effective length of database: 17,143,297,704 effective search space: 10063115752248 effective search space used: 10063115752248 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
