>HEM3_THET2 (Q72H57) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 301

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
 Frame = -3

Query: 386 VEVGTRG*MLSV*GRKTKFIVQRIREHWP-------CLTTRRSQRESTRLWLICSAWFQE 228
           V VGTRG  L++   +T+F+V+R++E WP        + TR  Q  S R   I     QE
Sbjct: 4   VVVGTRGSALAL--AQTRFVVERLKETWPETEFKIRTIKTRGDQGASPREEAIFVKEIQE 61

Query: 227 PLAKRQDLRMIHLL 186
            L  R+    +H L
Sbjct: 62  ALLSREIDIAVHSL 75

>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)|
           (Fragment)
          Length = 353

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 517 HHHS*YDHLHAGVASVQQASHSPVQPSSEPQAFP*T 624
           HHHS + HLHA  A  Q + H P+   ++ Q  P T
Sbjct: 158 HHHS-HSHLHAHPAHHQTSPHPPLHTGNQAQVSPAT 192

>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 517 HHHS*YDHLHAGVASVQQASHSPVQPSSEPQAFP*T 624
           HHHS + HLHA  A  Q + H P+   ++ Q  P T
Sbjct: 313 HHHS-HSHLHAHPAHHQTSPHPPLHTGNQAQVSPAT 347

>URB1_USTMA (P40349) Siderophore biosynthesis regulatory protein URBS1|
          Length = 950

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
 Frame = +3

Query: 282 SPRS*TWPVLSYPLHYKLGFPSLYG*HSSSGAYFHSSHTPNLQTSES--------HPQKD 437
           S RS   PV   PL  +LG   L+G  SS G      H      S+         H    
Sbjct: 700 SQRSQRSPV-DAPLTDRLGRSELHG-ESSHGTSNAPEHAARASASDGARLGSVVPHHHHH 757

Query: 438 QPHHAVGYASPAVHIVQWHHLHRALS 515
             HH   +AS AVH    HH H  ++
Sbjct: 758 HHHHHANHASHAVHHGHHHHHHHPVT 783

>ATG2_EMENI (Q5B1T9) Autophagy-related protein 2|
          Length = 2102

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 459  IPRRGEVGLSADEIQKFEDLGYVMSGSRHQRMNAIRIRK 343
            +PRR      +D+IQ F D+GYV   S       +RI +
Sbjct: 1350 LPRRRAASPQSDQIQAFTDMGYVSVSSISSATAVVRIMR 1388

>SBCC_BACSU (O06714) Nuclease sbcCD subunit C|
          Length = 1130

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 23/106 (21%), Positives = 48/106 (45%)
 Frame = -2

Query: 504 GEGDAIAQYVQQGKRIPRRGEVGLSADEIQKFEDLGYVMSGSRHQRMNAIRIRKENQVYS 325
           G G+A ++ V+Q +++  + EV L A            M  +R Q     R  +  ++++
Sbjct: 206 GLGEASSEAVEQAEKVLEQAEVRLEA------------MRKNRDQAKE--RFTEHQEIWN 251

Query: 324 AEDKRALAMFNYEEKSKREHKVMADLQRLVSRTIGQETGPSHDPFA 187
            + +++     YEE+ KR  +    +  +  R +  ET  +  P+A
Sbjct: 252 VQKEKS----TYEEEEKRLAEEQPHIDSMQKRLLEAETAAALKPYA 293

>TPM_HOMAM (O44119) Tropomyosin (Allergen Hom a 1)|
          Length = 284

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 26/81 (32%), Positives = 39/81 (48%)
 Frame = -2

Query: 444 EVGLSADEIQKFEDLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKSKREH 265
           E   +ADE ++   +    S S  +RM+A+    ENQ+  A      A   Y+E +++  
Sbjct: 115 EASQAADESERMRKVLENRSLSDEERMDAL----ENQLKEARFLAEEADRKYDEVARKLA 170

Query: 264 KVMADLQRLVSRTIGQETGPS 202
            V ADL+R   R    ETG S
Sbjct: 171 MVEADLERAEERA---ETGES 188

>TPM_PANST (O61379) Tropomyosin (Allergen Pan s 1) (Pan s I)|
          Length = 274

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 26/81 (32%), Positives = 39/81 (48%)
 Frame = -2

Query: 444 EVGLSADEIQKFEDLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKSKREH 265
           E   +ADE ++   +    S S  +RM+A+    ENQ+  A      A   Y+E +++  
Sbjct: 105 EASQAADESERMRKVLENRSLSDEERMDAL----ENQLKEARFLAEEADRKYDEVARKLA 160

Query: 264 KVMADLQRLVSRTIGQETGPS 202
            V ADL+R   R    ETG S
Sbjct: 161 MVEADLERAEERA---ETGES 178

>TPM_METEN (Q25456) Tropomyosin (Allergen Met e 1) (Met e I)|
          Length = 274

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 26/81 (32%), Positives = 39/81 (48%)
 Frame = -2

Query: 444 EVGLSADEIQKFEDLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKSKREH 265
           E   +ADE ++   +    S S  +RM+A+    ENQ+  A      A   Y+E +++  
Sbjct: 105 EASQAADESERMRKVLENRSLSDEERMDAL----ENQLKEARFLAEEADRKYDEVARKLA 160

Query: 264 KVMADLQRLVSRTIGQETGPS 202
            V ADL+R   R    ETG S
Sbjct: 161 MVEADLERAEERA---ETGES 178

>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)|
          Length = 428

 Score = 24.6 bits (52), Expect(2) = 9.8
 Identities = 11/34 (32%), Positives = 12/34 (35%)
 Frame = +3

Query: 423 HPQKDQPHHAVGYASPAVHIVQWHHLHRALSAPP 524
           H     PHHA  +     H    HH H     PP
Sbjct: 135 HLHPHHPHHAHHHHHHHHHAAHHHHHHHPPQPPP 168



 Score = 23.1 bits (48), Expect(2) = 9.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 538 HLHAGVASVQQASHSPVQPSSEPQ 609
           + H   A   Q  H P QP+ +PQ
Sbjct: 177 YFHQQPAPAPQPPHLPSQPAQQPQ 200


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,261,074
Number of Sequences: 219361
Number of extensions: 1734513
Number of successful extensions: 4871
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4865
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)