ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, p... 1231 0.0
2gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransf... 682 0.0
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
4emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb... 139 1e-29
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
6emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E... 139 1e-29
7emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003... 92 3e-15
8ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predic... 76 2e-10
9emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4,... 76 2e-10
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
11dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 1e-08
12ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predic... 58 4e-05
13emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 58 4e-05
14dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
15dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
16gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol meth... 50 0.009
17gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transf... 50 0.009
18gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic aci... 46 0.14
19emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 44 0.56
20gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome... 42 2.2
21gb|AY041136.1| Metopus palaeformis clone 4 alpha-tubulin gene, p... 42 2.2
22gb|AY041135.1| Metopus palaeformis clone 3 alpha-tubulin gene, p... 42 2.2
23gb|AY041134.1| Metopus palaeformis clone 2 alpha-tubulin gene, p... 42 2.2
24gb|AY041133.1| Metopus palaeformis clone 1 alpha-tubulin gene, p... 42 2.2
25dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RI... 42 2.2
26gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.2
27gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosom... 42 2.2
28gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 42 2.2
29gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 8.8
30gb|AC150386.2| Branchiostoma floridae clone CH302-103G16, comple... 40 8.8
31ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.8
32ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.8
33ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.8
34ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.8
35gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.8
36gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, compl... 40 8.8
37emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, comp... 40 8.8
38emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;... 40 8.8
39emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.8
40gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Can... 40 8.8
41gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete se... 40 8.8
42dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.8
43dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.8
44dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.8
45dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.8
46gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clo... 40 8.8
47gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clo... 40 8.8
48gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 8.8
49dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-m... 40 8.8
50gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clo... 40 8.8
51gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23... 40 8.8
52emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clon... 40 8.8
53gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 40 8.8
54emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 8.8
55gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 8.8
56gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete s... 40 8.8
57gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 40 8.8
58dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CT... 40 8.8
59gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, com... 40 8.8
60emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 i... 40 8.8 
>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds
          Length = 983

 Score = 1231 bits (621), Expect = 0.0
 Identities = 623/624 (99%)
 Strand = Plus / Minus

                                                                       
Query: 19  aagtgctcctattcgggactataccactctggtacgtggatgctacttggtgaactcaag 78
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 aagtgctcctattcgggactataccactctggtacgtggatgctacttggtgaactcaag 810

                                                                       
Query: 79  agcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatccagcttgttt 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 agcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatccagcttgttt 750

                                                                       
Query: 139 ggctagcctggcaaactccttctccgtcctctgctttgctcccttgaagagcacaaacat 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ggctagcctggcaaactccttctccgtcctctgctttgctcccttgaagagcacaaacat 690

                                                                       
Query: 199 gatgatatccaaggtnaatgcatcccgcgctgtgagagacgagtctgggttctccgggag 258
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gatgatatccaaggtgaatgcatcccgcgctgtgagagacgagtctgggttctccgggag 630

                                                                       
Query: 259 gataccatccacgacgatcaccttcccgtcttttgggagagcgttgtggcagttgcttag 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gataccatccacgacgatcaccttcccgtcttttgggagagcgttgtggcagttgcttag 570

                                                                       
Query: 319 tattttgacgaactcgtcgtcgttaagcataagcgtgatccactgcaagagaaccgcatc 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tattttgacgaactcgtcgtcgttaagcataagcgtgatccactgcaagagaaccgcatc 510

                                                                       
Query: 379 tccagtgggtatactctcatacatatctccagccacatgttcgactcctggaagagggag 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tccagtgggtatactctcatacatatctccagccacatgttcgactcctggaagagggag 450

                                                                       
Query: 439 gccttgggcgatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttaga 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gccttgggcgatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttaga 390

                                                                       
Query: 499 ggtgatcatccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacacc 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ggtgatcatccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacacc 330

                                                                       
Query: 559 atcgaatcccttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccat 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atcgaatcccttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccat 270

                                   
Query: 619 ggcattgtcgaacagtgttcccaa 642
           ||||||||||||||||||||||||
Sbjct: 269 ggcattgtcgaacagtgttcccaa 246
to top
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene,
            complete cds
          Length = 5238

 Score =  682 bits (344), Expect = 0.0
 Identities = 346/347 (99%)
 Strand = Plus / Minus

                                                                        
Query: 19   aagtgctcctattcgggactataccactctggtacgtggatgctacttggtgaactcaag 78
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4772 aagtgctcctattcgggactataccactctggtacgtggatgctacttggtgaactcaag 4713

                                                                        
Query: 79   agcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatccagcttgttt 138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4712 agcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatccagcttgttt 4653

                                                                        
Query: 139  ggctagcctggcaaactccttctccgtcctctgctttgctcccttgaagagcacaaacat 198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4652 ggctagcctggcaaactccttctccgtcctctgctttgctcccttgaagagcacaaacat 4593

                                                                        
Query: 199  gatgatatccaaggtnaatgcatcccgcgctgtgagagacgagtctgggttctccgggag 258
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4592 gatgatatccaaggtgaatgcatcccgcgctgtgagagacgagtctgggttctccgggag 4533

                                                                        
Query: 259  gataccatccacgacgatcaccttcccgtcttttgggagagcgttgtggcagttgcttag 318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4532 gataccatccacgacgatcaccttcccgtcttttgggagagcgttgtggcagttgcttag 4473

                                                           
Query: 319  tattttgacgaactcgtcgtcgttaagcataagcgtgatccactgca 365
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4472 tattttgacgaactcgtcgtcgttaagcataagcgtgatccactgca 4426



 Score =  432 bits (218), Expect = e-118
 Identities = 218/218 (100%)
 Strand = Plus / Minus

                                                                        
Query: 425  cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3650 cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 3591

                                                                        
Query: 485  tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccgacgtccaca 544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3590 tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccgacgtccaca 3531

                                                                        
Query: 545  agccgctgcacaccatcgaatcccttgaagcgctcgagcatcttggtgaccaggatcaca 604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3530 agccgctgcacaccatcgaatcccttgaagcgctcgagcatcttggtgaccaggatcaca 3471

                                                  
Query: 605  gagtgctgagccatggcattgtcgaacagtgttcccaa 642
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 3470 gagtgctgagccatggcattgtcgaacagtgttcccaa 3433



 Score =  135 bits (68), Expect = 2e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                        
Query: 361  ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3910 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 3851

                    
Query: 421  gactcctg 428
            ||||||||
Sbjct: 3850 gactcctg 3843
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  139 bits (70), Expect = 1e-29
 Identities = 157/186 (84%)
 Strand = Plus / Minus

                                                                           
Query: 448     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
               ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 5364332 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364273

                                                                           
Query: 508     ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 567
               ||| |||||||| |||   || |||||||| || || ||| |||| || || ||||||||
Sbjct: 5364272 ccccagggtggatccgtcacccccaccgacatcgacgagctgctggacgccgtcgaatcc 5364213

                                                                           
Query: 568     cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 627
                | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | |||
Sbjct: 5364212 ttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggtc 5364153

                     
Query: 628     gaacag 633
               ||||||
Sbjct: 5364152 gaacag 5364147



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 69      tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 128
               ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 5374724 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374665

                                                                           
Query: 129     cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 188
               ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 5374664 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374605

                                                    
Query: 189     gcacaaacatgatgatatccaaggtnaatgcatcccg 225
               | ||||||||||| ||||||| ||| |||| ||||||
Sbjct: 5374604 ggacaaacatgatcatatccatggtgaatgaatcccg 5374568



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 151/186 (81%)
 Strand = Plus / Minus

                                                                           
Query: 448     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
               |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 5172160 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172101

                                                                           
Query: 508     ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 567
               ||| |||||||| |||  ||| |||||| | || || |||||||| |  |||||||| ||
Sbjct: 5172100 ccccagggtggatccgtcgcctccaccggcatcgacgagccgctggatgccatcgaaacc 5172041

                                                                           
Query: 568     cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 627
                | |||||| ||||||||||||  | || ||||| | |||||||| |||||||| | |||
Sbjct: 5172040 ttcgaagcgttcgagcatcttgcgggcccggatcgccgagtgctgcgccatggcgtggtc 5171981

                     
Query: 628     gaacag 633
               ||||||
Sbjct: 5171980 gaacag 5171975



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 134/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 60      gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 119
               |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173415 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173356

                                                                           
Query: 120     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 179
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173355 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173296

                                                                
Query: 180     ccttgaagagcacaaacatgatgatatccaaggtnaatgcatcccgcgc 228
               |||||||||| ||||||| ||| ||||||| ||| |||| |||| ||||
Sbjct: 5173295 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173247



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 361     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 420
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172597 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172538
to top
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score =  139 bits (70), Expect = 1e-29
 Identities = 157/186 (84%)
 Strand = Plus / Minus

                                                                         
Query: 448   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
             ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 36399 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 36340

                                                                         
Query: 508   ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 567
             ||| |||||||| |||   || |||||||| || || ||| |||| || || ||||||||
Sbjct: 36339 ccccagggtggatccgtcacccccaccgacatcgacgagctgctggacgccgtcgaatcc 36280

                                                                         
Query: 568   cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 627
              | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | |||
Sbjct: 36279 ttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggtc 36220

                   
Query: 628   gaacag 633
             ||||||
Sbjct: 36219 gaacag 36214



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                         
Query: 69    tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 128
             ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 46791 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 46732

                                                                         
Query: 129   cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 188
             ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 46731 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 46672

                                                  
Query: 189   gcacaaacatgatgatatccaaggtnaatgcatcccg 225
             | ||||||||||| ||||||| ||| |||| ||||||
Sbjct: 46671 ggacaaacatgatcatatccatggtgaatgaatcccg 46635
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  139 bits (70), Expect = 1e-29
 Identities = 157/186 (84%)
 Strand = Plus / Minus

                                                                           
Query: 448     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
               ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 5364321 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364262

                                                                           
Query: 508     ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 567
               ||| |||||||| |||   || |||||||| || || ||| |||| || || ||||||||
Sbjct: 5364261 ccccagggtggatccgtcacccccaccgacatcgacgagctgctggacgccgtcgaatcc 5364202

                                                                           
Query: 568     cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 627
                | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | |||
Sbjct: 5364201 ttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggtc 5364142

                     
Query: 628     gaacag 633
               ||||||
Sbjct: 5364141 gaacag 5364136



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 69      tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 128
               ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 5374713 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374654

                                                                           
Query: 129     cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 188
               ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 5374653 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374594

                                                    
Query: 189     gcacaaacatgatgatatccaaggtnaatgcatcccg 225
               | ||||||||||| ||||||| ||| |||| ||||||
Sbjct: 5374593 ggacaaacatgatcatatccatggtgaatgaatcccg 5374557



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 151/186 (81%)
 Strand = Plus / Minus

                                                                           
Query: 448     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
               |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 5172142 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172083

                                                                           
Query: 508     ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 567
               ||| |||||||| |||  ||| |||||| | || || |||||||| |  |||||||| ||
Sbjct: 5172082 ccccagggtggatccgtcgcctccaccggcatcgacgagccgctggatgccatcgaaacc 5172023

                                                                           
Query: 568     cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 627
                | |||||| ||||||||||||  | || ||||| | |||||||| |||||||| | |||
Sbjct: 5172022 ttcgaagcgttcgagcatcttgcgggcccggatcgccgagtgctgcgccatggcgtggtc 5171963

                     
Query: 628     gaacag 633
               ||||||
Sbjct: 5171962 gaacag 5171957



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 134/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 60      gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 119
               |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173397 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173338

                                                                           
Query: 120     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 179
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173337 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173278

                                                                
Query: 180     ccttgaagagcacaaacatgatgatatccaaggtnaatgcatcccgcgc 228
               |||||||||| ||||||| ||| ||||||| ||| |||| |||| ||||
Sbjct: 5173277 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173229



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 361     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 420
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172579 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172520
to top
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
              Nipponbare of ssp. japonica of Oryza sativa (rice),
              complete sequence
          Length = 141841

 Score =  139 bits (70), Expect = 1e-29
 Identities = 157/186 (84%)
 Strand = Plus / Plus

                                                                          
Query: 448    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
              ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 101476 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 101535

                                                                          
Query: 508    ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 567
              ||| |||||||| |||   || |||||||| || || ||| |||| || || ||||||||
Sbjct: 101536 ccccagggtggatccgtcacccccaccgacatcgacgagctgctggacgccgtcgaatcc 101595

                                                                          
Query: 568    cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 627
               | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | |||
Sbjct: 101596 ttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggtc 101655

                    
Query: 628    gaacag 633
              ||||||
Sbjct: 101656 gaacag 101661



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 129/157 (82%)
 Strand = Plus / Plus

                                                                         
Query: 69    tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 128
             ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 91084 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 91143

                                                                         
Query: 129   cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 188
             ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 91144 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 91203

                                                  
Query: 189   gcacaaacatgatgatatccaaggtnaatgcatcccg 225
             | ||||||||||| ||||||| ||| |||| ||||||
Sbjct: 91204 ggacaaacatgatcatatccatggtgaatgaatcccg 91240
to top
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124959

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 151/186 (81%)
 Strand = Plus / Plus

                                                                         
Query: 448   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
             |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 91439 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 91498

                                                                         
Query: 508   ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 567
             ||| |||||||| |||  ||| |||||| | || || |||||||| |  |||||||| ||
Sbjct: 91499 ccccagggtggatccgtcgcctccaccggcatcgacgagccgctggatgccatcgaaacc 91558

                                                                         
Query: 568   cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 627
              | |||||| ||||||||||||  | || ||||| | |||||||| |||||||| | |||
Sbjct: 91559 ttcgaagcgttcgagcatcttgcgggcccggatcgccgagtgctgcgccatggcgtggtc 91618

                   
Query: 628   gaacag 633
             ||||||
Sbjct: 91619 gaacag 91624



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 134/169 (79%)
 Strand = Plus / Plus

                                                                         
Query: 60    gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 119
             |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 90184 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 90243

                                                                         
Query: 120   cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 179
             ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 90244 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 90303

                                                              
Query: 180   ccttgaagagcacaaacatgatgatatccaaggtnaatgcatcccgcgc 228
             |||||||||| ||||||| ||| ||||||| ||| |||| |||| ||||
Sbjct: 90304 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 90352



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 361   ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 420
             |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 91002 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 91061
to top
>ref|XM_470970.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 118/142 (83%), Gaps = 2/142 (1%)
 Strand = Plus / Minus

                                                                       
Query: 449 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 508
           |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 677 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 618

                                                                       
Query: 509 cctagggtggagccggtgccaccaccgacgtccacaagc-cgctgcacaccatcgaatcc 567
            | ||||||| ||||||||| || |||||||| || ||| ||||| || || ||||| ||
Sbjct: 617 tccagggtggcgccggtgcccccgccgacgtcgacgagcacgctg-acgccgtcgaaccc 559

                                 
Query: 568 cttgaagcgctcgagcatcttg 589
           || ||| |||||||||| ||||
Sbjct: 558 ctggaatcgctcgagcagcttg 537
to top
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
              complete sequence
          Length = 144778

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 118/142 (83%), Gaps = 2/142 (1%)
 Strand = Plus / Minus

                                                                          
Query: 449    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 508
              |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 103606 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 103547

                                                                          
Query: 509    cctagggtggagccggtgccaccaccgacgtccacaagc-cgctgcacaccatcgaatcc 567
               | ||||||| ||||||||| || |||||||| || ||| ||||| || || ||||| ||
Sbjct: 103546 tccagggtggcgccggtgcccccgccgacgtcgacgagcacgctg-acgccgtcgaaccc 103488

                                    
Query: 568    cttgaagcgctcgagcatcttg 589
              || ||| |||||||||| ||||
Sbjct: 103487 ctggaatcgctcgagcagcttg 103466
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 118/142 (83%), Gaps = 2/142 (1%)
 Strand = Plus / Minus

                                                                          
Query: 449    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 508
              |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 307786 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 307727

                                                                          
Query: 509    cctagggtggagccggtgccaccaccgacgtccacaagc-cgctgcacaccatcgaatcc 567
               | ||||||| ||||||||| || |||||||| || ||| ||||| || || ||||| ||
Sbjct: 307726 tccagggtggcgccggtgcccccgccgacgtcgacgagcacgctg-acgccgtcgaaccc 307668

                                    
Query: 568    cttgaagcgctcgagcatcttg 589
              || ||| |||||||||| ||||
Sbjct: 307667 ctggaatcgctcgagcagcttg 307646



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                           
Query: 448     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
               ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 5127584 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 5127525

                                                
Query: 508     ccctagggtggagccggtgccaccaccgacgtc 540
               | | ||||||| ||||||||| || ||||||||
Sbjct: 5127524 ctccagggtggcgccggtgcccccgccgacgtc 5127492
to top
>dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K22, full
           insert sequence
          Length = 1233

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 115/139 (82%), Gaps = 2/139 (1%)
 Strand = Plus / Minus

                                                                       
Query: 452 acatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccct 511
           ||||||||||||||  |||| | |||||| |||| ||||||| | || ||||||||| | 
Sbjct: 684 acatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatctcc 625

                                                                       
Query: 512 agggtggagccggtgccaccaccgacgtccacaagc-cgctgcacaccatcgaatccctt 570
           ||||||| ||||||||| || |||||||| || ||| ||||| || || ||||| |||| 
Sbjct: 624 agggtggcgccggtgcccccgccgacgtcgacgagcacgctg-acgccgtcgaacccctg 566

                              
Query: 571 gaagcgctcgagcatcttg 589
           ||| |||||||||| ||||
Sbjct: 565 gaatcgctcgagcagcttg 547
to top
>ref|XM_474640.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1137

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                       
Query: 448 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 747 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 688

                                            
Query: 508 ccctagggtggagccggtgccaccaccgacgtc 540
           | | ||||||| ||||||||| || ||||||||
Sbjct: 687 ctccagggtggcgccggtgcccccgccgacgtc 655
to top
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
              complete sequence
          Length = 144144

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                          
Query: 448    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
              ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 103857 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 103798

                                               
Query: 508    ccctagggtggagccggtgccaccaccgacgtc 540
              | | ||||||| ||||||||| || ||||||||
Sbjct: 103797 ctccagggtggcgccggtgcccccgccgacgtc 103765
to top
>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full
           insert sequence
          Length = 1308

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                       
Query: 448 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 773 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 714

                                            
Query: 508 ccctagggtggagccggtgccaccaccgacgtc 540
           | | ||||||| ||||||||| || ||||||||
Sbjct: 713 ctccagggtggcgccggtgcccccgccgacgtc 681
to top
>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full
           insert sequence
          Length = 1365

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                       
Query: 448 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 507
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 760 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 701

                                            
Query: 508 ccctagggtggagccggtgccaccaccgacgtc 540
           | | ||||||| ||||||||| || ||||||||
Sbjct: 700 ctccagggtggcgccggtgcccccgccgacgtc 668
to top
>gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol methyltransferase (Imt1) gene,
            complete cds
          Length = 3929

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 449  atgacatgaggcaggtcatagttgatgcc 477
            ||||||||||||| |||||||||||||||
Sbjct: 2808 atgacatgaggcaagtcatagttgatgcc 2780
to top
>gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transferase (Imt1) mRNA,
           complete cds
          Length = 1494

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 449 atgacatgaggcaggtcatagttgatgcc 477
           ||||||||||||| |||||||||||||||
Sbjct: 756 atgacatgaggcaagtcatagttgatgcc 728
to top
>gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic acid 3-O-methyltransferase
           mRNA, partial cds
          Length = 1205

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 447 cgatgacatgaggcaggtcatagttgatgcc 477
           |||||||||||||||| ||| ||||||||||
Sbjct: 666 cgatgacatgaggcagatcaaagttgatgcc 636
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 537     cgtccacaagccgctgcacacc 558
               ||||||||||||||||||||||
Sbjct: 1987800 cgtccacaagccgctgcacacc 1987779
to top
>gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome 6, complete sequence
          Length = 238262

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 395    tcatacatatctccagccacatgtt 419
              |||||||||| ||||||||||||||
Sbjct: 237760 tcatacatatatccagccacatgtt 237784
to top
>gb|AY041136.1| Metopus palaeformis clone 4 alpha-tubulin gene, partial cds
          Length = 1095

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 518 gagccggtgccaccaccgacg 538
           |||||||||||||||||||||
Sbjct: 326 gagccggtgccaccaccgacg 306
to top
>gb|AY041135.1| Metopus palaeformis clone 3 alpha-tubulin gene, partial cds
          Length = 1095

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 518 gagccggtgccaccaccgacg 538
           |||||||||||||||||||||
Sbjct: 326 gagccggtgccaccaccgacg 306
to top
>gb|AY041134.1| Metopus palaeformis clone 2 alpha-tubulin gene, partial cds
          Length = 1094

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 518 gagccggtgccaccaccgacg 538
           |||||||||||||||||||||
Sbjct: 326 gagccggtgccaccaccgacg 306
to top
>gb|AY041133.1| Metopus palaeformis clone 1 alpha-tubulin gene, partial cds
          Length = 1082

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 518 gagccggtgccaccaccgacg 538
           |||||||||||||||||||||
Sbjct: 313 gagccggtgccaccaccgacg 293
to top
>dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430501C11
            product:unclassifiable, full insert sequence
          Length = 1789

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 395  tcatacatatctccagccacatgtt 419
            |||||||||| ||||||||||||||
Sbjct: 1024 tcatacatatatccagccacatgtt 1048
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 526     gccaccaccgacgtccacaag 546
               |||||||||||||||||||||
Sbjct: 4165857 gccaccaccgacgtccacaag 4165837
to top
>gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosome 6, complete sequence
          Length = 150872

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 395   tcatacatatctccagccacatgtt 419
             |||||||||| ||||||||||||||
Sbjct: 45951 tcatacatatatccagccacatgtt 45975
to top
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 87     agttgaagaatatgtaggttttctt 111
              |||||||||| ||||||||||||||
Sbjct: 313473 agttgaagaaaatgtaggttttctt 313449
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 566    cccttgaagcgctcgagcat 585
              ||||||||||||||||||||
Sbjct: 406715 cccttgaagcgctcgagcat 406734
to top
>gb|AC150386.2| Branchiostoma floridae clone CH302-103G16, complete sequence
          Length = 195926

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 517    ggagccggtgccaccaccga 536
              ||||||||||||||||||||
Sbjct: 156214 ggagccggtgccaccaccga 156233
to top
>ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
           mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 426 ctggaagagggaggccttgg 445
           ||||||||||||||||||||
Sbjct: 111 ctggaagagggaggccttgg 92
to top
>ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial
           mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 432 gagggaggccttgggcgatg 451
           ||||||||||||||||||||
Sbjct: 265 gagggaggccttgggcgatg 246
to top
>ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
           mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 426 ctggaagagggaggccttgg 445
           ||||||||||||||||||||
Sbjct: 111 ctggaagagggaggccttgg 92
to top
>ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial
           mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 432 gagggaggccttgggcgatg 451
           ||||||||||||||||||||
Sbjct: 265 gagggaggccttgggcgatg 246
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 566     cccttgaagcgctcgagcat 585
               ||||||||||||||||||||
Sbjct: 3254199 cccttgaagcgctcgagcat 3254218
to top
>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence
          Length = 225321

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ttgaagagcacaaacatgat 201
              ||||||||||||||||||||
Sbjct: 180691 ttgaagagcacaaacatgat 180672
to top
>emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, complete sequence
          Length = 25359

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   gaactcgtcgtcgttaagca 347
             ||||||||||||||||||||
Sbjct: 23437 gaactcgtcgtcgttaagca 23418
to top
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    tggcaaactccttctccgtc 166
              ||||||||||||||||||||
Sbjct: 340353 tggcaaactccttctccgtc 340372
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 566     cccttgaagcgctcgagcat 585
               ||||||||||||||||||||
Sbjct: 2984071 cccttgaagcgctcgagcat 2984090
to top
>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125400

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    aaacatgatgatatccaagg 212
              ||||||||||||||||||||
Sbjct: 120643 aaacatgatgatatccaagg 120624
to top
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence
          Length = 129658

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    acaaacatgatgatatccaa 210
              ||||||||||||||||||||
Sbjct: 111959 acaaacatgatgatatccaa 111978
to top
>dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK101
          Length = 734

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 ttttgggagagcgttgtggc 308
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK89
          Length = 734

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 ttttgggagagcgttgtggc 308
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK41
          Length = 728

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 ttttgggagagcgttgtggc 308
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK35
          Length = 734

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 ttttgggagagcgttgtggc 308
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clone step.1002d03 genomic
           sequence
          Length = 3734

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  aaaagttgaagaatatgtag 103
           ||||||||||||||||||||
Sbjct: 177 aaaagttgaagaatatgtag 158
to top
>gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clone step.1002a08 genomic
            sequence
          Length = 3383

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   aaaagttgaagaatatgtag 103
            ||||||||||||||||||||
Sbjct: 2238 aaaagttgaagaatatgtag 2257
to top
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 558    catcgaatcccttgaagcgc 577
              ||||||||||||||||||||
Sbjct: 833397 catcgaatcccttgaagcgc 833378
to top
>dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-methyltransferase,
           complete cds
          Length = 1303

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 374 gcatctccagtgggtatactctcatacatatctcca 409
           ||||||||| |||| | ||||||| |||||||||||
Sbjct: 788 gcatctccactgggaacactctcaaacatatctcca 753
to top
>gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clone step.1055e11 genomic
            sequence
          Length = 2995

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aaaagttgaagaatatgtag 103
            ||||||||||||||||||||
Sbjct: 1549 aaaagttgaagaatatgtag 1530
to top
>gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23-F12, complete sequence
          Length = 42412

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 432  gagggaggccttgggcgatg 451
            ||||||||||||||||||||
Sbjct: 5744 gagggaggccttgggcgatg 5763
to top
>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11
          Length = 46353

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   gagggaggccttgggcgatg 451
             ||||||||||||||||||||
Sbjct: 39948 gagggaggccttgggcgatg 39967
to top
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     aaaagttgaagaatatgtag 103
              ||||||||||||||||||||
Sbjct: 226670 aaaagttgaagaatatgtag 226689
to top
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    cggtaaatccagcttgtttg 139
              ||||||||||||||||||||
Sbjct: 147510 cggtaaatccagcttgtttg 147491
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 566     cccttgaagcgctcgagcat 585
               ||||||||||||||||||||
Sbjct: 1888851 cccttgaagcgctcgagcat 1888832
to top
>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence
          Length = 162405

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   ggctagcctggcaaactcct 158
             ||||||||||||||||||||
Sbjct: 87830 ggctagcctggcaaactcct 87811
to top
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     aaaagttgaagaatatgtag 103
              ||||||||||||||||||||
Sbjct: 342005 aaaagttgaagaatatgtag 342024
to top
>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete
             sequence
          Length = 86000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   tcccttgaagagcacaaaca 197
             ||||||||||||||||||||
Sbjct: 62557 tcccttgaagagcacaaaca 62538
to top
>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   ttgaagagcacaaacatgat 201
             ||||||||||||||||||||
Sbjct: 79901 ttgaagagcacaaacatgat 79882
to top
>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18,
              complete sequence
          Length = 193827

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    cggtaaatccagcttgtttg 139
              ||||||||||||||||||||
Sbjct: 173244 cggtaaatccagcttgtttg 173225


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,189,697
Number of Sequences: 3902068
Number of extensions: 4189697
Number of successful extensions: 75112
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74752
Number of HSP's gapped (non-prelim): 360
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top