ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags21k16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY366475.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase 3 mRNA, partial cds Length = 1983 Score = 839 bits (423), Expect = 0.0 Identities = 447/455 (98%) Strand = Plus / Minus Query: 251 aggttcctggaaactgcttgaattactcagggcatgatgacggggctgatatcccatatg 310 |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 1664 aggttcctggaagctgcttgaattattcagggcatgatgacagggctgatatcccatatg 1605 Query: 311 tccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1604 tccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 1545 Query: 371 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1544 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 1485 Query: 431 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1484 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 1425 Query: 491 tcatttccttccaaagaacccattaattcatcatagttgctagtcccaaagacgccactg 550 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1424 tcatttccttccaaagaacccatcaattcatcatagttgctagtcccaaagacgccactg 1365 Query: 551 cggacgtattccttaacctcttcaaatctcaggtcaggcacaaactttccttcagctctc 610 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 1364 cggacgtattccttaacctcttcaaatctcgggtcaggcacaaactttccttcagccctc 1305 Query: 611 tcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaaattctcctct 670 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1304 tcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaagttctcctct 1245 Query: 671 ccaacctcttctctgatcttcacattcgcaccatc 705 ||||||||||||||||||| ||||||||||||||| Sbjct: 1244 ccaacctcttctctgatctccacattcgcaccatc 1210 Score = 172 bits (87), Expect = 1e-39 Identities = 161/182 (88%), Gaps = 4/182 (2%) Strand = Plus / Minus Query: 13 cagatacaccaa-gtttgtttgtttgatgattctgctccaacattattcggcgaaattcg 71 |||||||||||| || |||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1907 cagatacaccaaagtatgtttgtttgatgattctgctccaactttattcggcgaaatac- 1849 Query: 72 cacactataagcccgggtgacactggctaaccggcatgcaagtttgttaaagatgaacta 131 |||| ||||||| |||| | |||||| ||| | |||||||| ||| ||| ||||||||| Sbjct: 1848 -acaccataagcctgggt-atactggccaactgacatgcaagattgctaaggatgaacta 1791 Query: 132 tcctgcatgctctcagctctcaggttcatgtcagagcttgcatatgcctatacaaaactg 191 |||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||| Sbjct: 1790 ccctgcatgctctcagcactcaggtccatgccagaacttgcatatgcctatacaaaactg 1731 Query: 192 gg 193 || Sbjct: 1730 gg 1729
>gb|AY357118.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase mRNA, partial cds; nuclear gene for plastid product Length = 2834 Score = 831 bits (419), Expect = 0.0 Identities = 446/455 (98%) Strand = Plus / Minus Query: 251 aggttcctggaaactgcttgaattactcagggcatgatgacggggctgatatcccatatg 310 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2540 aggttcctggaagctgcttgaattattcagggcatgatgacggggctgatatcccatatg 2481 Query: 311 tccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 370 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2480 tccttggcgtactcatggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 2421 Query: 371 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 430 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2420 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttgctgg 2361 Query: 431 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2360 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 2301 Query: 491 tcatttccttccaaagaacccattaattcatcatagttgctagtcccaaagacgccactg 550 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2300 tcatttccttccaaagaacccatcaattcatcatagttgctagtcccaaagacgccactg 2241 Query: 551 cggacgtattccttaacctcttcaaatctcaggtcaggcacaaactttccttcagctctc 610 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 2240 cggacgtattccttaacctcttcaaatctcgggtcaggcacaaactttccttcagccctc 2181 Query: 611 tcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaaattctcctct 670 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2180 tcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaagttctcctct 2121 Query: 671 ccaacctcttctctgatcttcacattcgcaccatc 705 ||||||||||||||||||| ||||||||||||||| Sbjct: 2120 ccaacctcttctctgatctccacattcgcaccatc 2086 Score = 172 bits (87), Expect = 1e-39 Identities = 161/183 (87%), Gaps = 2/183 (1%) Strand = Plus / Minus Query: 13 cagatacaccaa-gtttgtttgtttgatgattctgctccaacatt-attcggcgaaattc 70 |||||||||||| || |||||||||||||||||||||||||| || |||||||||||| | Sbjct: 2788 cagatacaccaaagtatgtttgtttgatgattctgctccaacctttattcggcgaaatac 2729 Query: 71 gcacactataagcccgggtgacactggctaaccggcatgcaagtttgttaaagatgaact 130 ||||| ||||||| |||| | |||||| ||| | || ||||| ||| ||| ||| |||| Sbjct: 2728 acacaccataagcctgggtaatactggccaactgacacgcaagattgctaaggattaact 2669 Query: 131 atcctgcatgctctcagctctcaggttcatgtcagagcttgcatatgcctatacaaaact 190 | |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 2668 accctgcatgctctcagcactcaggtccatgtcagaacttgcatatgcctatacaaaact 2609 Query: 191 ggg 193 ||| Sbjct: 2608 ggg 2606
>gb|AY366476.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase mRNA, partial cds Length = 2307 Score = 823 bits (415), Expect = 0.0 Identities = 445/455 (97%) Strand = Plus / Minus Query: 251 aggttcctggaaactgcttgaattactcagggcatgatgacggggctgatatcccatatg 310 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2012 aggttcctggaagctgcttgaattattcagggcatgatgacggggctgatatcccatatg 1953 Query: 311 tccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 370 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1952 tccttggcgtactcatggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 1893 Query: 371 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 430 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1892 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttgctgg 1833 Query: 431 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 490 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1832 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgcccataacct 1773 Query: 491 tcatttccttccaaagaacccattaattcatcatagttgctagtcccaaagacgccactg 550 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1772 tcatttccttccaaagaacccatcaattcatcatagttgctagtcccaaagacgccactg 1713 Query: 551 cggacgtattccttaacctcttcaaatctcaggtcaggcacaaactttccttcagctctc 610 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 1712 cggacgtattccttaacctcttcaaatctcgggtcaggcacaaactttccttcagccctc 1653 Query: 611 tcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaaattctcctct 670 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1652 tcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaagttctcctct 1593 Query: 671 ccaacctcttctctgatcttcacattcgcaccatc 705 ||||||||||||||||||| ||||||||||||||| Sbjct: 1592 ccaacctcttctctgatctccacattcgcaccatc 1558 Score = 170 bits (86), Expect = 4e-39 Identities = 159/182 (87%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 13 cagatacaccaa-gtttgtttgtttgatgattctgctccaacattattcggcgaaattcg 71 |||||||||||| || |||||||||||||||||||||||||| |||||||||||||| | Sbjct: 2259 cagatacaccaaagtatgtttgtttgatgattctgctccaactttattcggcgaaataca 2200 Query: 72 cacactataagcccgggtgacactggctaaccggcatgcaagtttgttaaagatgaacta 131 ||||| ||||||| |||| | |||||| ||| | | ||||| ||| ||| ||| ||||| Sbjct: 2199 cacaccataagcctgggtaatactggccaactgaaaagcaagattgctaaggattaacta 2140 Query: 132 tcctgcatgctctcagctctcaggttcatgtcagagcttgcatatgcctatacaaaactg 191 ||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 2139 cactgcatgctctcagcactcaggtccatgtcagaacttgcatatgcctatacaaaactg 2080 Query: 192 gg 193 || Sbjct: 2079 gg 2078
>gb|AY366474.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase 2 mRNA, partial cds Length = 1683 Score = 815 bits (411), Expect = 0.0 Identities = 444/455 (97%) Strand = Plus / Minus Query: 251 aggttcctggaaactgcttgaattactcagggcatgatgacggggctgatatcccatatg 310 |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 1400 aggttcctggaagctgcttgaattattcagggcatgatgacggggctgataccccatatg 1341 Query: 311 tccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 370 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1340 tccttggcatactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 1281 Query: 371 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1280 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 1221 Query: 431 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1220 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 1161 Query: 491 tcatttccttccaaagaacccattaattcatcatagttgctagtcccaaagacgccactg 550 ||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||| Sbjct: 1160 tcatttccttccaaagaacccatcaattcatcatagttgccagtcccaaagatgccactg 1101 Query: 551 cggacgtattccttaacctcttcaaatctcaggtcaggcacaaactttccttcagctctc 610 |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct: 1100 cggacgtattccttaacctcttcaaatctcgggtcaggcacaaacttcccttcagctctc 1041 Query: 611 tcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaaattctcctct 670 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1040 tcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaagttctcctct 981 Query: 671 ccaacctcttctctgatcttcacattcgcaccatc 705 ||||||||||||||||||| ||||||||||||||| Sbjct: 980 ccaacctcttctctgatctccacattcgcaccatc 946 Score = 186 bits (94), Expect = 7e-44 Identities = 161/182 (88%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 13 cagatacaccaa-gtttgtttgtttgatgattctgctccaacattattcggcgaaattcg 71 |||||||||||| || |||||||||||||| ||||||||||| |||||| ||||||| | Sbjct: 1646 cagatacaccaaagtatgtttgtttgatgactctgctccaactttattcagcgaaataca 1587 Query: 72 cacactataagcccgggtgacactggctaaccggcatgcaagtttgttaaagatgaacta 131 ||||| ||||||| |||| | |||||||||| | ||||||| ||| ||| ||||||||| Sbjct: 1586 cacaccataagcctgggtaatactggctaactgacatgcaatattgctaaggatgaacta 1527 Query: 132 tcctgcatgctctcagctctcaggttcatgtcagagcttgcatatgcctatacaaaactg 191 |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 1526 ccctgcatgctctcagcactcaggtccatgtcagaacttgcatatgcctatacaaaactg 1467 Query: 192 gg 193 || Sbjct: 1466 gg 1465
>gb|BT018213.1| Zea mays clone EL01N0561A02.c mRNA sequence Length = 1470 Score = 430 bits (217), Expect = e-117 Identities = 364/413 (88%) Strand = Plus / Minus Query: 293 gggctgatatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttg 352 |||||||||||||| || |||||||||||||| || ||||||| || |||||||||||| Sbjct: 1129 gggctgatatcccagatatccttggcgtactcatgaatcgtcctatcgctgctgaacttg 1070 Query: 353 ggggaacccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgct 412 | || || || ||||||||||||||||| |||||||||| ||||||||||||||| || Sbjct: 1069 gatgagccagccgtgttgaggatagacatccttgtccataacttctgatctcggtacgcc 1010 Query: 413 tcatcaactttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataa 472 |||||||||||||| ||||||||||| || ||||| || |||||||||||||| |||||| Sbjct: 1009 tcatcaactttttcttggcattcaatatagctggggaagtccttgccaacaaggaaataa 950 Query: 473 tctgcacgtccataaccttcatttccttccaaagaacccattaattcatcatagttgcta 532 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| || | Sbjct: 949 tctgcacgtccgtaaccttcatttccttccaaagaacccatcaattcatcatagctgtaa 890 Query: 533 gtcccaaagacgccactgcggacgtattccttaacctcttcaaatctcaggtcaggcaca 592 ||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 889 gtcccaaagacaccactgcggacaaattccttaacctcctcaaatcttgggtcaggcaca 830 Query: 593 aactttccttcagctctctcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaag 652 |||||||| || ||||| |||| || ||||||||| |||||| |||| | ||||||||| Sbjct: 829 aactttccctcggctctttctttccgcaaaccagcaatttcatgtgcctctgcaccaaaa 770 Query: 653 aggaaaaaattctcctctccaacctcttctctgatcttcacattcgcaccatc 705 |||||||| || || ||||||||||| |||||||||| |||||| |||||||| Sbjct: 769 aggaaaaagttttcttctccaacctcctctctgatctccacatttgcaccatc 717
>gb|AY106211.1| Zea mays PCO070449 mRNA sequence Length = 2149 Score = 430 bits (217), Expect = e-117 Identities = 364/413 (88%) Strand = Plus / Minus Query: 293 gggctgatatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttg 352 |||||||||||||| || |||||||||||||| || ||||||| || |||||||||||| Sbjct: 1775 gggctgatatcccagatatccttggcgtactcatgaatcgtcctatcgctgctgaacttg 1716 Query: 353 ggggaacccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgct 412 | || || || ||||||||||||||||| |||||||||| ||||||||||||||| || Sbjct: 1715 gatgagccagccgtgttgaggatagacatccttgtccataacttctgatctcggtacgcc 1656 Query: 413 tcatcaactttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataa 472 |||||||||||||| ||||||||||| || ||||| || |||||||||||||| |||||| Sbjct: 1655 tcatcaactttttcttggcattcaatatagctggggaagtccttgccaacaaggaaataa 1596 Query: 473 tctgcacgtccataaccttcatttccttccaaagaacccattaattcatcatagttgcta 532 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| || | Sbjct: 1595 tctgcacgtccgtaaccttcatttccttccaaagaacccatcaattcatcatagctgtaa 1536 Query: 533 gtcccaaagacgccactgcggacgtattccttaacctcttcaaatctcaggtcaggcaca 592 ||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 1535 gtcccaaagacaccactgcggacaaattccttaacctcctcaaatcttgggtcaggcaca 1476 Query: 593 aactttccttcagctctctcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaag 652 |||||||| || ||||| |||| || ||||||||| |||||| |||| | ||||||||| Sbjct: 1475 aactttccctcggctctttctttccgcaaaccagcaatttcatgtgcctctgcaccaaaa 1416 Query: 653 aggaaaaaattctcctctccaacctcttctctgatcttcacattcgcaccatc 705 |||||||| || |||||||||||||| |||||||| | |||||| |||||||| Sbjct: 1415 aggaaaaagttttcctctccaacctcctctctgatttccacatttgcaccatc 1363
>ref|XM_469836.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3133 Score = 394 bits (199), Expect = e-106 Identities = 370/427 (86%) Strand = Plus / Minus Query: 279 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 338 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2854 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 2795 Query: 339 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagcttct 398 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct: 2794 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagtttct 2735 Query: 399 gatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatccttgc 458 |||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| || | Sbjct: 2734 gatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatctttac 2675 Query: 459 caacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccattaatt 518 ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| || | Sbjct: 2674 caacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatcaagt 2615 Query: 519 catcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttcaaatc 578 |||| |||||| ||| |||||||| ||||||||||| || |||||||||||| |||| Sbjct: 2614 catcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcgaatc 2555 Query: 579 tcaggtcaggcacaaactttccttcagctctctcttgcctcaaaccagcgatttcaggtg 638 | ||||||||||||||||||| | |||||||||| ||| |||||||| |||||| ||| Sbjct: 2554 ttgggtcaggcacaaactttccctgggctctctctttccttaaaccagcaatttcatgtg 2495 Query: 639 catgtgcaccaaagaggaaaaaattctcctctccaacctcttctctgatcttcacattcg 698 | | |||||||| |||||||| || |||||||||||||| |||||||| | |||||| | Sbjct: 2494 cctcagcaccaaaaaggaaaaagttttcctctccaacctcctctctgatttccacattag 2435 Query: 699 caccatc 705 ||||||| Sbjct: 2434 caccatc 2428
>gb|AF327055.1|AF327055 Oryza sativa alpha 1,4-glucan phosphorylase L isozyme mRNA, partial cds Length = 3141 Score = 394 bits (199), Expect = e-106 Identities = 370/427 (86%) Strand = Plus / Minus Query: 279 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 338 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2786 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 2727 Query: 339 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagcttct 398 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct: 2726 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagtttct 2667 Query: 399 gatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatccttgc 458 |||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| || | Sbjct: 2666 gatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatctttac 2607 Query: 459 caacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccattaatt 518 ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| || | Sbjct: 2606 caacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatcaagt 2547 Query: 519 catcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttcaaatc 578 |||| |||||| ||| |||||||| ||||||||||| || |||||||||||| |||| Sbjct: 2546 catcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcgaatc 2487 Query: 579 tcaggtcaggcacaaactttccttcagctctctcttgcctcaaaccagcgatttcaggtg 638 | ||||||||||||||||||| | |||||||||| ||| |||||||| |||||| ||| Sbjct: 2486 ttgggtcaggcacaaactttccctgggctctctctttccttaaaccagcaatttcatgtg 2427 Query: 639 catgtgcaccaaagaggaaaaaattctcctctccaacctcttctctgatcttcacattcg 698 | | |||||||| |||||||| || |||||||||||||| |||||||| | |||||| | Sbjct: 2426 cctcagcaccaaaaaggaaaaagttttcctctccaacctcctctctgatttccacattag 2367 Query: 699 caccatc 705 ||||||| Sbjct: 2366 caccatc 2360
>dbj|AK063766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B07, full insert sequence Length = 3049 Score = 394 bits (199), Expect = e-106 Identities = 370/427 (86%) Strand = Plus / Minus Query: 279 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 338 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2684 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 2625 Query: 339 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagcttct 398 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct: 2624 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagtttct 2565 Query: 399 gatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatccttgc 458 |||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| || | Sbjct: 2564 gatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatctttac 2505 Query: 459 caacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccattaatt 518 ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| || | Sbjct: 2504 caacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatcaagt 2445 Query: 519 catcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttcaaatc 578 |||| |||||| ||| |||||||| ||||||||||| || |||||||||||| |||| Sbjct: 2444 catcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcgaatc 2385 Query: 579 tcaggtcaggcacaaactttccttcagctctctcttgcctcaaaccagcgatttcaggtg 638 | ||||||||||||||||||| | |||||||||| ||| |||||||| |||||| ||| Sbjct: 2384 ttgggtcaggcacaaactttccctgggctctctctttccttaaaccagcaatttcatgtg 2325 Query: 639 catgtgcaccaaagaggaaaaaattctcctctccaacctcttctctgatcttcacattcg 698 | | |||||||| |||||||| || |||||||||||||| |||||||| | |||||| | Sbjct: 2324 cctcagcaccaaaaaggaaaaagttttcctctccaacctcctctctgatttccacattag 2265 Query: 699 caccatc 705 ||||||| Sbjct: 2264 caccatc 2258
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 202 bits (102), Expect = 1e-48 Identities = 177/202 (87%) Strand = Plus / Plus Query: 395 ttctgatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatcc 454 |||||||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| Sbjct: 31029178 ttctgatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatct 31029237 Query: 455 ttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccatt 514 || |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| Sbjct: 31029238 ttaccaacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatc 31029297 Query: 515 aattcatcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttca 574 || ||||| |||||| ||| |||||||| ||||||||||| || |||||||||||| Sbjct: 31029298 aagtcatcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcg 31029357 Query: 575 aatctcaggtcaggcacaaact 596 ||||| ||||||||||||||| Sbjct: 31029358 aatcttgggtcaggcacaaact 31029379 Score = 121 bits (61), Expect = 3e-24 Identities = 103/117 (88%) Strand = Plus / Plus Query: 279 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 338 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 31028476 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 31028535 Query: 339 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagct 395 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 31028536 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagct 31028592 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 605 gctctctcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaaattc 664 |||||||||| ||| |||||||| |||||| |||| | |||||||| |||||||| || Sbjct: 31029519 gctctctctttccttaaaccagcaatttcatgtgcctcagcaccaaaaaggaaaaagttt 31029578 Query: 665 tcctctccaacctcttctctgatcttcacattcgcaccatc 705 |||||||||||||| |||||||| | |||||| |||||||| Sbjct: 31029579 tcctctccaacctcctctctgatttccacattagcaccatc 31029619 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 atctcaggtcaggcacaaac 595 |||||||||||||||||||| Sbjct: 9427454 atctcaggtcaggcacaaac 9427473
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 202 bits (102), Expect = 1e-48 Identities = 177/202 (87%) Strand = Plus / Minus Query: 395 ttctgatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatcc 454 |||||||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| Sbjct: 66886 ttctgatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatct 66827 Query: 455 ttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccatt 514 || |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| Sbjct: 66826 ttaccaacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatc 66767 Query: 515 aattcatcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttca 574 || ||||| |||||| ||| |||||||| ||||||||||| || |||||||||||| Sbjct: 66766 aagtcatcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcg 66707 Query: 575 aatctcaggtcaggcacaaact 596 ||||| ||||||||||||||| Sbjct: 66706 aatcttgggtcaggcacaaact 66685 Score = 121 bits (61), Expect = 3e-24 Identities = 103/117 (88%) Strand = Plus / Minus Query: 279 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 338 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 67588 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 67529 Query: 339 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagct 395 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 67528 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagct 67472 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Minus Query: 605 gctctctcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaaattc 664 |||||||||| ||| |||||||| |||||| |||| | |||||||| |||||||| || Sbjct: 66545 gctctctctttccttaaaccagcaatttcatgtgcctcagcaccaaaaaggaaaaagttt 66486 Query: 665 tcctctccaacctcttctctgatcttcacattcgcaccatc 705 |||||||||||||| |||||||| | |||||| |||||||| Sbjct: 66485 tcctctccaacctcctctctgatttccacattagcaccatc 66445
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 202 bits (102), Expect = 1e-48 Identities = 177/202 (87%) Strand = Plus / Plus Query: 395 ttctgatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatcc 454 |||||||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| Sbjct: 31119701 ttctgatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatct 31119760 Query: 455 ttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccatt 514 || |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| Sbjct: 31119761 ttaccaacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatc 31119820 Query: 515 aattcatcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttca 574 || ||||| |||||| ||| |||||||| ||||||||||| || |||||||||||| Sbjct: 31119821 aagtcatcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcg 31119880 Query: 575 aatctcaggtcaggcacaaact 596 ||||| ||||||||||||||| Sbjct: 31119881 aatcttgggtcaggcacaaact 31119902 Score = 121 bits (61), Expect = 3e-24 Identities = 103/117 (88%) Strand = Plus / Plus Query: 279 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 338 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 31118999 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 31119058 Query: 339 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagct 395 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 31119059 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagct 31119115 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 605 gctctctcttgcctcaaaccagcgatttcaggtgcatgtgcaccaaagaggaaaaaattc 664 |||||||||| ||| |||||||| |||||| |||| | |||||||| |||||||| || Sbjct: 31120042 gctctctctttccttaaaccagcaatttcatgtgcctcagcaccaaaaaggaaaaagttt 31120101 Query: 665 tcctctccaacctcttctctgatcttcacattcgcaccatc 705 |||||||||||||| |||||||| | |||||| |||||||| Sbjct: 31120102 tcctctccaacctcctctctgatttccacattagcaccatc 31120142 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 atctcaggtcaggcacaaac 595 |||||||||||||||||||| Sbjct: 9425575 atctcaggtcaggcacaaac 9425594
>ref|NM_113857.2| Arabidopsis thaliana phosphorylase/ transferase, transferring glycosyl groups AT3G29320 mRNA, complete cds Length = 3165 Score = 167 bits (84), Expect = 6e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 299 atatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaa 358 |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 2916 atattccatatgtctttggcgtattcgtggatcgtccggtcactgctaaacttgaatgaa 2857 Query: 359 cccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatca 418 || |||||||| | || |||||||| |||||| ||||| ||||||||||| || || Sbjct: 2856 cctgctgtgttcattattgacattctcgtccatcttttctggtctcggtatgcctcgtcg 2797 Query: 419 actttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgca 478 |||||||| |||||||| |||||||| ||||| || |||||||| || || ||||| || Sbjct: 2796 actttttcttggcattcgatgtaactaggaaagtctttgccaactaggaagtaatccgct 2737 Query: 479 cgtccataaccttcatttccttccaaagaacccattaattcatcatag 526 |||||| | ||||| |||||||||||||| || |||| |||||||||| Sbjct: 2736 cgtccaaagccttcgtttccttccaaagagccgattagttcatcatag 2689 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 644 gcaccaaagaggaaaaaattctcctctccaacctcttctctgatcttcacattcgcacca 703 |||||||||||||| ||||| || |||||||| |||||||| |||| |||||||| ||| Sbjct: 2571 gcaccaaagaggaagaaattttcttctccaacttcttctctaatctcgacattcgcccca 2512 Query: 704 tc 705 || Sbjct: 2511 tc 2510
>dbj|AK221378.1| Arabidopsis thaliana mRNA for alpha-glucan phosphorylase, partial cds, clone: RAFL25-38-C05 Length = 594 Score = 167 bits (84), Expect = 6e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 299 atatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaa 358 |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 426 atattccatatgtctttggcgtattcgtggatcgtccggtcactgctaaacttgaatgaa 367 Query: 359 cccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatca 418 || |||||||| | || |||||||| |||||| ||||| ||||||||||| || || Sbjct: 366 cctgctgtgttcattattgacattctcgtccatcttttctggtctcggtatgcctcgtcg 307 Query: 419 actttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgca 478 |||||||| |||||||| |||||||| ||||| || |||||||| || || ||||| || Sbjct: 306 actttttcttggcattcgatgtaactaggaaagtctttgccaactaggaagtaatccgct 247 Query: 479 cgtccataaccttcatttccttccaaagaacccattaattcatcatag 526 |||||| | ||||| |||||||||||||| || |||| |||||||||| Sbjct: 246 cgtccaaagccttcgtttccttccaaagagccgattagttcatcatag 199 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 644 gcaccaaagaggaaaaaattctcctctccaacctcttctctgatcttcacattcgcacca 703 |||||||||||||| ||||| || |||||||| |||||||| |||| |||||||| ||| Sbjct: 81 gcaccaaagaggaagaaattttcttctccaacttcttctctaatctcgacattcgcccca 22 Query: 704 tc 705 || Sbjct: 21 tc 20
>gb|AY049235.1| Arabidopsis thaliana AT3g29320/MUO10_2 mRNA, complete cds Length = 3114 Score = 167 bits (84), Expect = 6e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 299 atatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaa 358 |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 2916 atattccatatgtctttggcgtattcgtggatcgtccggtcactgctaaacttgaatgaa 2857 Query: 359 cccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatca 418 || |||||||| | || |||||||| |||||| ||||| ||||||||||| || || Sbjct: 2856 cctgctgtgttcattattgacattctcgtccatcttttctggtctcggtatgcctcgtcg 2797 Query: 419 actttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgca 478 |||||||| |||||||| |||||||| ||||| || |||||||| || || ||||| || Sbjct: 2796 actttttcttggcattcgatgtaactaggaaagtctttgccaactaggaagtaatccgct 2737 Query: 479 cgtccataaccttcatttccttccaaagaacccattaattcatcatag 526 |||||| | ||||| |||||||||||||| || |||| |||||||||| Sbjct: 2736 cgtccaaagccttcgtttccttccaaagagccgattagttcatcatag 2689 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 644 gcaccaaagaggaaaaaattctcctctccaacctcttctctgatcttcacattcgcacca 703 |||||||||||||| ||||| || |||||||| |||||||| |||| |||||||| ||| Sbjct: 2571 gcaccaaagaggaagaaattttcttctccaacttcttctctaatctcgacattcgcccca 2512 Query: 704 tc 705 || Sbjct: 2511 tc 2510
>gb|BT003015.1| Arabidopsis thaliana At3g29320/MUO10_2 gene, complete cds Length = 2889 Score = 167 bits (84), Expect = 6e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 299 atatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaa 358 |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 2867 atattccatatgtctttggcgtattcgtggatcgtccggtcactgctaaacttgaatgaa 2808 Query: 359 cccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatca 418 || |||||||| | || |||||||| |||||| ||||| ||||||||||| || || Sbjct: 2807 cctgctgtgttcattattgacattctcgtccatcttttctggtctcggtatgcctcgtcg 2748 Query: 419 actttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgca 478 |||||||| |||||||| |||||||| ||||| || |||||||| || || ||||| || Sbjct: 2747 actttttcttggcattcgatgtaactaggaaagtctttgccaactaggaagtaatccgct 2688 Query: 479 cgtccataaccttcatttccttccaaagaacccattaattcatcatag 526 |||||| | ||||| |||||||||||||| || |||| |||||||||| Sbjct: 2687 cgtccaaagccttcgtttccttccaaagagccgattagttcatcatag 2640 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 644 gcaccaaagaggaaaaaattctcctctccaacctcttctctgatcttcacattcgcacca 703 |||||||||||||| ||||| || |||||||| |||||||| |||| |||||||| ||| Sbjct: 2522 gcaccaaagaggaagaaattttcttctccaacttcttctctaatctcgacattcgcccca 2463 Query: 704 tc 705 || Sbjct: 2462 tc 2461
>emb|X52385.1|STSTARCH Potato mRNA for starch phosphorylase Length = 4942 Score = 113 bits (57), Expect = 8e-22 Identities = 180/221 (81%) Strand = Plus / Minus Query: 308 atgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtg 367 ||||| ||||| || || ||||| || | |||||||||||||||| || |||||||| Sbjct: 4772 atgtctttggcatattcatggattgttctgtcactgctgaacttgtacgatcccgctgta 4713 Query: 368 ttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcc 427 || | ||| ||||| ||||||| ||||| || || ||||| ||||||||||| || Sbjct: 4712 ttcaagattgacatcgttgtccaccttttctggtcgcgatatgcctcatcaactttctct 4653 Query: 428 tggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataa 487 |||||||| ||||||||||| || |||||||| ||||| ||||| || ||||| ||| || Sbjct: 4652 tggcattctatgtaactggggaagtccttgcccacaaggaaatagtcagcacggccaaaa 4593 Query: 488 ccttcatttccttccaaagaacccattaattcatcatagtt 528 ||||||||||||||||| || || |||| ||||||||||| Sbjct: 4592 ccttcatttccttccaacgatccaattaggtcatcatagtt 4552 Score = 44.1 bits (22), Expect = 0.62 Identities = 79/98 (80%) Strand = Plus / Minus Query: 584 tcaggcacaaactttccttcagctctctcttgcctcaaaccagcgatttcaggtgcatgt 643 ||||| ||||||||||| |||||||| |||| || | || || |||||| | || || Sbjct: 4496 tcaggtacaaactttccgtcagctctttcttttctaagccctgcaatttcatgagcttga 4437 Query: 644 gcaccaaagaggaaaaaattctcctctccaacctcttc 681 ||||||||||| || || || || |||||||||||||| Sbjct: 4436 gcaccaaagagaaagaagttttcttctccaacctcttc 4399
>dbj|D00520.1|POTGP Solanum tuberosum mRNA for alpha-glucan phosphorylase precursor, complete cds Length = 3101 Score = 113 bits (57), Expect = 8e-22 Identities = 180/221 (81%) Strand = Plus / Minus Query: 308 atgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtg 367 ||||| ||||| || || ||||| || | |||||||||||||||| || |||||||| Sbjct: 2913 atgtctttggcatattcatggattgttctgtcactgctgaacttgtacgatcccgctgta 2854 Query: 368 ttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcc 427 || | ||| ||||| ||||||| ||||| || || ||||| ||||||||||| || Sbjct: 2853 ttcaagattgacatcgttgtccaccttttctggtcgcgatatgcctcatcaactttctct 2794 Query: 428 tggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataa 487 |||||||| ||||||||||| || |||||||| ||||| ||||| || ||||| ||| || Sbjct: 2793 tggcattctatgtaactggggaagtccttgcccacaaggaaatagtcagcacggccaaaa 2734 Query: 488 ccttcatttccttccaaagaacccattaattcatcatagtt 528 ||||||||||||||||| || || |||| ||||||||||| Sbjct: 2733 ccttcatttccttccaacgatccaattaggtcatcatagtt 2693 Score = 44.1 bits (22), Expect = 0.62 Identities = 79/98 (80%) Strand = Plus / Minus Query: 584 tcaggcacaaactttccttcagctctctcttgcctcaaaccagcgatttcaggtgcatgt 643 ||||| ||||||||||| |||||||| |||| || | || || |||||| | || || Sbjct: 2637 tcaggtacaaactttccgtcagctctttcttttctaagccctgcaatttcatgagcttga 2578 Query: 644 gcaccaaagaggaaaaaattctcctctccaacctcttc 681 ||||||||||| || || || || |||||||||||||| Sbjct: 2577 gcaccaaagagaaagaagttttcttctccaacctcttc 2540
>emb|X73684.1|STSTP1 S.tuberosum mRNA for leaf type L starch phosphorylase Length = 3171 Score = 105 bits (53), Expect = 2e-19 Identities = 152/185 (82%) Strand = Plus / Minus Query: 362 gctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatcaact 421 |||||||| | ||| |||||| | |||||| |||||| ||||| ||||||||||||||| Sbjct: 2926 gctgtgtttaagatcgacattttggtccatttcttctggtctcgatatgcttcatcaact 2867 Query: 422 ttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgt 481 || || ||||| || || ||| ||| |||||||| || ||||||||||| || ||||| Sbjct: 2866 ttatcttggcactctatataatcggggaaatcctttcctacaagaaaatagtcagcacga 2807 Query: 482 ccataaccttcatttccttccaaagaacccattaattcatcatagttgctagtcccaaag 541 ||||| ||||| ||||||||||| || ||||| | ||| ||||||||| || |||||| Sbjct: 2806 ccatagccttcgtttccttccaaggatcccatgagttcttcatagttgtaggtgccaaag 2747 Query: 542 acgcc 546 ||||| Sbjct: 2746 acgcc 2742
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10 Length = 77589 Score = 103 bits (52), Expect = 8e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 395 ttctgatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatcc 454 ||||| ||||||||||| || || |||||||| |||||||| |||||||| ||||| || Sbjct: 7006 ttctggtctcggtatgcctcgtcgactttttcttggcattcgatgtaactaggaaagtct 6947 Query: 455 ttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccatt 514 |||||||| || || ||||| || |||||| | ||||| |||||||||||||| || ||| Sbjct: 6946 ttgccaactaggaagtaatccgctcgtccaaagccttcgtttccttccaaagagccgatt 6887 Query: 515 aattcatcatag 526 | |||||||||| Sbjct: 6886 agttcatcatag 6875 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 299 atatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaa 358 |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 7206 atattccatatgtctttggcgtattcgtggatcgtccggtcactgctaaacttgaatgaa 7147 Query: 359 cccgctgtgttgaggatagacattcttgtccat 391 || |||||||| | || |||||||| |||||| Sbjct: 7146 cctgctgtgttcattattgacattctcgtccat 7114 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 644 gcaccaaagaggaaaaaattctcctctccaacctcttctctgatcttcacattcgcacca 703 |||||||||||||| ||||| || |||||||| |||||||| |||| |||||||| ||| Sbjct: 6668 gcaccaaagaggaagaaattttcttctccaacttcttctctaatctcgacattcgcccca 6609 Query: 704 tc 705 || Sbjct: 6608 tc 6607
>gb|M64362.1|IPBSPP Sweet potato starch phosphorylase mRNA, complete cds Length = 3292 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 362 gctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatcaact 421 |||||||| | ||| |||||||| ||||||| ||| || ||||| ||||| |||||||| Sbjct: 2868 gctgtgttcaagattgacattctagtccatatcttttggtctcgatatgcctcatcaacc 2809 Query: 422 ttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgt 481 || || |||||||| |||||||| || || |||||||| ||||| ||||| ||| |||| Sbjct: 2808 ttctcttggcattctatgtaactagggaagtccttgcccacaaggaaatagtctccacga 2749 Query: 482 ccataaccttcatttccttccaaaga 507 ||| | ||||||||||| |||||||| Sbjct: 2748 ccaaagccttcatttccctccaaaga 2723
>emb|X85181.1|SOSTPII S.oleracea mRNA for alpha-glucan phosphorylase Length = 3088 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Minus Query: 329 atcgtccggtcactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtc 388 ||||| ||||| ||||| |||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 2920 atcgttcggtcgctgctaaacttgaatgaaccagctgtatttaggattgacattcttgtc 2861 Query: 389 catagcttctgatctcggtatgcttcatcaactttttcctggcattcaatgtaactggga 448 ||| || ||||||| ||||||| ||||||| ||| |||||||| | ||||| || Sbjct: 2860 catttctgttgatctctatatgcttggtcaacttgttcttggcattctacataactaggg 2801 Query: 449 aaatccttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaaga 507 || || ||||| ||||| |||||||| ||||||||| | ||||||||||| || ||||| Sbjct: 2800 aagtctttgcccacaaggaaataatcagcacgtccaaatccttcatttccctctaaaga 2742
>gb|L25626.1|IPBSTAPHOA Ipomoea batatas starch phosphorylase gene, complete cds Length = 6594 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 401 tctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatccttgcca 460 ||||| ||||| |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 6013 tctcgatatgcctcatcaaccttctcttggcattctatgtaactagggaagtccttgccc 5954 Query: 461 acaagaaaataatctgcacgtccataaccttcatttccttccaaaga 507 ||||| ||||| ||| |||| ||| | ||||||||||| |||||||| Sbjct: 5953 acaaggaaatagtctccacgaccaaagccttcatttccctccaaaga 5907
>emb|Z36880.1|VFALGLPH Vicia faba var. minor mRNA for alpha 1,4-glucan phosphorylase L isoform precursor (VfPho1 gene) Length = 3283 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 452 tccttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaagaaccc 511 |||| ||| ||||||||||||||||| || ||| |||||||||||||||| || || || Sbjct: 2894 tcctggcccacaagaaaataatctgctcgaccaaaaccttcatttccttctaaggatcca 2835 Query: 512 attaattcatcatagttgctagtcccaaagacgccact 549 || | ||||||||||||| || ||||||||| ||||| Sbjct: 2834 atcagttcatcatagttgtaagacccaaagacaccact 2797
>emb|AJ538738.1|NTA538738 Nicotiana tabacum cDNA-AFLP-fragment BC4-M43-030 Length = 242 Score = 73.8 bits (37), Expect = 7e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 407 tatgcttcatcaactttttcctggcattcaatgtaactgggaaaatccttgccaacaaga 466 ||||| ||||||||||| || ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 70 tatgcctcatcaactttctcttggcattcaatataactgggaaagtccttgcccacaagg 11 Query: 467 aaata 471 ||||| Sbjct: 10 aaata 6
>emb|Z35117.1|VFALGLPHO Vicia faba var. minor mRNA for alpha 1,4-glucan phosphorylase type H, (VfPho2 gene) Length = 2910 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 643 tgcaccaaagaggaaaaaattctcctctccaa 674 ||||||||| ||||||||||||||||| |||| Sbjct: 2317 tgcaccaaacaggaaaaaattctcctcaccaa 2286
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 317 gcgtactcgtggatcgtccggtc 339 ||||||||||||||||||||||| Sbjct: 1005245 gcgtactcgtggatcgtccggtc 1005223
>ref|XM_380604.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00428.1) partial mRNA Length = 2055 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 665 tcctctccaacctcttctctgatctt 690 |||||| ||||||||||||||||||| Sbjct: 587 tcctcttcaacctcttctctgatctt 562
>gb|AY098895.1| Citrus hybrid cultivar starch phosphorylase type H mRNA, complete cds Length = 2884 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 643 tgcaccaaagaggaaaaaattctcctctcc 672 |||||||||||| || |||||||||||||| Sbjct: 2204 tgcaccaaagagaaagaaattctcctctcc 2175
>gb|AC154258.2| Mus musculus BAC clone RP24-216P24 from chromosome 16, complete sequence Length = 151118 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 tttgatgattctgctccaacat 55 |||||||||||||||||||||| Sbjct: 58244 tttgatgattctgctccaacat 58223
>gb|AC009251.6|AC009251 Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone BACR48K02, complete sequence Length = 178530 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 gtttgtttgtttgatgattctg 46 |||||||||||||||||||||| Sbjct: 79325 gtttgtttgtttgatgattctg 79304
>gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64 of 83 of the complete sequence Length = 253771 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 gtttgtttgtttgatgattctg 46 |||||||||||||||||||||| Sbjct: 206950 gtttgtttgtttgatgattctg 206929
>emb|Z98256.1|HS309I22 Human DNA sequence from clone RP1-309I22 on chromosome 22q12.1-13.2 Contains the 3' end of the TIMP3 gene for tissue inhibitor of metalloproteinase 3 (Sorsby fundus dystrophy, pseudoinflammatory), a novel pseudogene, a pseudogene similar to part of Cytochrome B and part of the SYN3 gene for Synapsin III, complete sequence Length = 97684 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 ttcagctctctcttgcctcaa 621 ||||||||||||||||||||| Sbjct: 54093 ttcagctctctcttgcctcaa 54073
>gb|AC175467.3| Pan troglodytes BAC clone CH251-302C22 from chromosome unknown, complete sequence Length = 186532 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 ttcagctctctcttgcctcaa 621 ||||||||||||||||||||| Sbjct: 5088 ttcagctctctcttgcctcaa 5068
>gb|AC183302.2| Pan troglodytes BAC clone CH251-258O5 from chromosome unknown, complete sequence Length = 211208 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 ttcagctctctcttgcctcaa 621 ||||||||||||||||||||| Sbjct: 95422 ttcagctctctcttgcctcaa 95442
>gb|AC004625.3| Arabidopsis thaliana chromosome 2 clone T26J13 map CIC11C08, complete sequence Length = 42499 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 aacccattaattcatcatagt 527 ||||||||||||||||||||| Sbjct: 32148 aacccattaattcatcatagt 32128
>gb|AC068196.4| Homo sapiens BAC clone RP11-685J19 from 2, complete sequence Length = 162566 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 562 cttaacctcttcaaatctcag 582 ||||||||||||||||||||| Sbjct: 107660 cttaacctcttcaaatctcag 107680
>emb|AL772230.20| Mouse DNA sequence from clone RP23-381K3 on chromosome 4, complete sequence Length = 120564 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 cagatacaccaagtttgtttgtttg 37 |||| |||||||||||||||||||| Sbjct: 117216 cagaaacaccaagtttgtttgtttg 117192
>gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, complete sequence Length = 190616 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctctcactgaggagtgaggc 225 |||||||||||||||||||| Sbjct: 93530 ctctcactgaggagtgaggc 93549
>ref|XM_614856.2| PREDICTED: Bos taurus similar to Protein KIAA0406, transcript variant 1 (LOC534917), mRNA Length = 3879 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 ttcatttccttccaaagaac 509 |||||||||||||||||||| Sbjct: 3844 ttcatttccttccaaagaac 3825
>ref|XM_882297.1| PREDICTED: Bos taurus similar to Protein KIAA0406, transcript variant 3 (LOC534917), mRNA Length = 3674 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 ttcatttccttccaaagaac 509 |||||||||||||||||||| Sbjct: 3639 ttcatttccttccaaagaac 3620
>ref|XM_882284.1| PREDICTED: Bos taurus similar to Protein KIAA0406, transcript variant 2 (LOC534917), mRNA Length = 1634 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 ttcatttccttccaaagaac 509 |||||||||||||||||||| Sbjct: 1599 ttcatttccttccaaagaac 1580
>gb|AC146193.3| Pan troglodytes BAC clone CH251-483N24 from Y, complete sequence Length = 232304 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 caccaagtttgtttgtttga 38 |||||||||||||||||||| Sbjct: 73293 caccaagtttgtttgtttga 73274
>gb|AC164575.7| Mus musculus 10 BAC RP23-455M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196723 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 648 caaagaggaaaaaattctcc 667 |||||||||||||||||||| Sbjct: 141182 caaagaggaaaaaattctcc 141163
>gb|AC149571.3| Rhinolophus ferrumequinum clone VMRC7-305L23, complete sequence Length = 190426 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 tgaggatagacattcttgtc 388 |||||||||||||||||||| Sbjct: 53807 tgaggatagacattcttgtc 53826
>emb|AL359532.26| Human DNA sequence from clone RP11-330O11 on chromosome 10 Contains the 3' end of the gene for a novel protein (LOC220929) (FLJ32761), a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 10 (RNA helicase) (DDH10) pseudogene and a CpG island, complete sequence Length = 179798 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 ctttccttcagctctctctt 614 |||||||||||||||||||| Sbjct: 12147 ctttccttcagctctctctt 12166
>emb|AL049712.12|HSDJ686C3 Human DNA sequence from clone RP4-686C3 on chromosome 20 Contains the IDH3B gene for isocitrate dehydrogenase 3 (NAD+) beta, the NOL5A gene for nucleolar protein 5A (56kDa with KKE/D repeat), the TMC2 gene for transmembrane cochlear expressed protein 2, a novel gene, the RNU56 gene for small nuclear RNA U56, the RNU57 gene for small nuclear RNA U57, the 5' end of one variant of the ZNF343 gene for zinc finger protein 343 and three CpG islands, complete sequence Length = 159272 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 656 aaaaaattctcctctccaac 675 |||||||||||||||||||| Sbjct: 129871 aaaaaattctcctctccaac 129890
>emb|AL596110.15| Mouse DNA sequence from clone RP23-330N10 on chromosome 11 Contains the 3' end of a variant of the gene for a novel protein similar to human sperm antigen HCMOGT-1 (B230396K10Rik), the Adora2b gene for adenosine A2b receptor, the gene for a novel protein (2410012H22Rik), a somatic cytochrome c (Cycs) pseudogene, a novel gene, a novel pseudogene, the gene for a novel protein (2810460C24Rik), the 3' end of the Ncor1 gene for nuclear receptor co-repressor 1 and two CpG islands, complete sequence Length = 214834 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gaggttcctggaaactgctt 269 |||||||||||||||||||| Sbjct: 90047 gaggttcctggaaactgctt 90066
>gb|AC120193.4| Homo sapiens chromosome 8, clone RP11-10H17, complete sequence Length = 174556 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 tgaggagtgaggcaaatctgtgac 236 |||||||||||||||| ||||||| Sbjct: 136079 tgaggagtgaggcaaagctgtgac 136102
>dbj|BS000611.1| Pan troglodytes chromosome Y clone:PTB-386A09, complete sequences Length = 171989 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 caccaagtttgtttgtttga 38 |||||||||||||||||||| Sbjct: 115414 caccaagtttgtttgtttga 115433
>dbj|BS000596.1| Pan troglodytes chromosome Y clone:PTB-130H13, complete sequences Length = 182507 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 caccaagtttgtttgtttga 38 |||||||||||||||||||| Sbjct: 15329 caccaagtttgtttgtttga 15348
>gb|AC100826.2| Homo sapiens chromosome 15, clone RP11-279F6, complete sequence Length = 168512 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gctctcagctctcaggttca 159 |||||||||||||||||||| Sbjct: 5906 gctctcagctctcaggttca 5887
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 caccaagtttgtttgtttga 38 |||||||||||||||||||| Sbjct: 22724949 caccaagtttgtttgtttga 22724930
>dbj|AK095149.1| Homo sapiens cDNA FLJ37830 fis, clone BRSSN2009395 Length = 1782 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 tagacattcttgtccatagcttct 398 ||||| |||||||||||||||||| Sbjct: 651 tagacgttcttgtccatagcttct 628
>gb|AC105270.2| Homo sapiens chromosome 1 clone RP4-684L20, complete sequence Length = 158043 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ccttcatttccttccaaaga 507 |||||||||||||||||||| Sbjct: 106290 ccttcatttccttccaaaga 106309
>gb|AC007859.11| Homo sapiens, clone RP11-41A1, complete sequence Length = 157267 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 662 ttctcctctccaacctcttc 681 |||||||||||||||||||| Sbjct: 44389 ttctcctctccaacctcttc 44408
>gb|AC022031.8| Homo sapiens chromosome 18, clone RP11-397A16, complete sequence Length = 202566 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 662 ttctcctctccaacctcttc 681 |||||||||||||||||||| Sbjct: 103261 ttctcctctccaacctcttc 103242
>gb|AC026337.29| Homo sapiens 2 BAC RP11-105E24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171004 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 ttccttaacctcttcaaatctcag 582 |||||||||||||| ||||||||| Sbjct: 128220 ttccttaacctctttaaatctcag 128197
>gb|AC027237.8| Homo sapiens chromosome 15, clone RP11-253M7, complete sequence Length = 157448 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gctctcagctctcaggttca 159 |||||||||||||||||||| Sbjct: 21291 gctctcagctctcaggttca 21310
>gb|AC024958.8| Homo sapiens, clone RP11-561E1, complete sequence Length = 190534 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 tgaggagtgaggcaaatctgtgac 236 |||||||||||||||| ||||||| Sbjct: 122824 tgaggagtgaggcaaagctgtgac 122801
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 atctcaggtcaggcacaaac 595 |||||||||||||||||||| Sbjct: 124854 atctcaggtcaggcacaaac 124873
>gb|AC151479.4| Pan troglodytes BAC clone CH251-656P8 from chromosome y, complete sequence Length = 179557 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 caccaagtttgtttgtttga 38 |||||||||||||||||||| Sbjct: 139015 caccaagtttgtttgtttga 138996
>gb|AC160946.6| Mus musculus 10 BAC RP23-175G6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192628 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 acaccaagtttgtttgtttg 37 |||||||||||||||||||| Sbjct: 56019 acaccaagtttgtttgtttg 56000
>gb|AC153917.6| Mus musculus 10 BAC RP23-283D8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182207 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 acaccaagtttgtttgtttg 37 |||||||||||||||||||| Sbjct: 37992 acaccaagtttgtttgtttg 38011
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gcatgcaagtttgttaaaga 124 |||||||||||||||||||| Sbjct: 6992203 gcatgcaagtttgttaaaga 6992222
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 atctcaggtcaggcacaaac 595 |||||||||||||||||||| Sbjct: 9833130 atctcaggtcaggcacaaac 9833149
>gb|AY211268.1| Chlamydomonas sp. W80 zeaxanthin epoxidase precursor (ZEP1) mRNA, complete cds; nuclear gene for chloroplast product Length = 2537 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 aacaagaaaataatctgcac 479 |||||||||||||||||||| Sbjct: 2478 aacaagaaaataatctgcac 2459
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 tgaggatagacattcttgtc 388 |||||||||||||||||||| Sbjct: 669651 tgaggatagacattcttgtc 669670
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 tggcgtactcgtggatcgtc 334 |||||||||||||||||||| Sbjct: 5039098 tggcgtactcgtggatcgtc 5039117
>gb|AF099102.3|AF099102 Hog cholera virus, complete genome Length = 12310 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 662 ttctcctctccaacctcttc 681 |||||||||||||||||||| Sbjct: 1828 ttctcctctccaacctcttc 1809
>gb|AC079395.6| Homo sapiens BAC clone RP11-219H23 from 2, complete sequence Length = 82827 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccgctgtgttgaggatagac 379 |||||||||||||||||||| Sbjct: 21576 ccgctgtgttgaggatagac 21557
>gb|AC018678.9| Homo sapiens BAC clone RP11-279E17 from 2, complete sequence Length = 169991 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 ttccttaacctcttcaaatctcag 582 |||||||||||||| ||||||||| Sbjct: 168448 ttccttaacctctttaaatctcag 168425
>gb|AC140052.4| Mus musculus BAC clone RP23-346E11 from chromosome 15, complete sequence Length = 210091 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agtttgtttgtttgatgatt 43 |||||||||||||||||||| Sbjct: 125519 agtttgtttgtttgatgatt 125500
>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0044K01 Length = 160643 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gcatgcaagtttgttaaaga 124 |||||||||||||||||||| Sbjct: 63374 gcatgcaagtttgttaaaga 63393
>gb|AC113458.10| Mus musculus chromosome 3, clone RP23-372O21, complete sequence Length = 232529 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 647 ccaaagaggaaaaaattctcctct 670 ||||||||||||||||||| |||| Sbjct: 67673 ccaaagaggaaaaaattctactct 67650
>gb|AY578688.1| Classical swine fever virus isolate RUCSFPLUM, complete genome Length = 12308 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 662 ttctcctctccaacctcttc 681 |||||||||||||||||||| Sbjct: 1828 ttctcctctccaacctcttc 1809
>emb|AL928556.7| Zebrafish DNA sequence from clone DKEY-63M7, complete sequence Length = 196404 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 628 gatttcaggtgcatgtgcaccaaa 651 |||||||| ||||||||||||||| Sbjct: 184833 gatttcagatgcatgtgcaccaaa 184856
>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1063H10 Length = 170453 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 atctcaggtcaggcacaaac 595 |||||||||||||||||||| Sbjct: 97062 atctcaggtcaggcacaaac 97081
>gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216161 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 tagacattcttgtccatagcttct 398 ||||| |||||||||||||||||| Sbjct: 12885 tagacgttcttgtccatagcttct 12908
>emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on chromosome 2, complete sequence Length = 194065 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tttgtttgatgattctgctc 49 |||||||||||||||||||| Sbjct: 91167 tttgtttgatgattctgctc 91148 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,771,548 Number of Sequences: 3902068 Number of extensions: 7771548 Number of successful extensions: 160134 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 159608 Number of HSP's gapped (non-prelim): 520 length of query: 705 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 682 effective length of database: 17,143,297,704 effective search space: 11691729034128 effective search space used: 11691729034128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
