ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags21k13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596586.1| Saccharum officinarum clone SCCCRZ2002H08, complete sequence Length = 2841 Score = 200 bits (101), Expect = 4e-48 Identities = 227/269 (84%) Strand = Plus / Minus Query: 319 tccttgggccgccacgtggtcttctggacgcagagcagcccttccttgcccgtggcgtag 378 ||||||||||||||| | | ||||| ||||||||||| || || |||||| ||| |||| Sbjct: 2581 tccttgggccgccacatcgacttctcgacgcagagcaagccctcgttgcccttggtgtag 2522 Query: 379 gtcatgcgcacctcccactgcagggacttcgccatgccttcgagcgctcttattgtctcc 438 ||||| ||||||||||||||||||||||| ||||||| ||| || | ||||||| || Sbjct: 2521 gtcattcgcacctcccactgcagggacttggccatgctttccagttcatttattgtgtct 2462 Query: 439 gcgtcgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctcagcaaac 498 || ||||| ||| |||||||| |||| ||||||||||| || |||||||| ||||| Sbjct: 2461 gcagtgtccctcacaatcagtttgccttgtggcctcaatacacgatcaacctcggcaaaa 2402 Query: 499 actcccaacaatttacatctctttttgagctttgaaaagagatggtctgcgtgtaggagg 558 ||| || |||||| |||||||||||||||||||| || |||||||| ||||| || ||| Sbjct: 2401 actgccgtcaatttgcatctctttttgagctttgagaatagatggtccgcgtgcagaagg 2342 Query: 559 tcatacgttctcgggtaagtgctgaaaga 587 ||||||||||| ||||||||||||||||| Sbjct: 2341 tcatacgttcttgggtaagtgctgaaaga 2313
>ref|XM_463541.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2421 Score = 196 bits (99), Expect = 6e-47 Identities = 240/287 (83%) Strand = Plus / Minus Query: 302 acatgcttgcttcgatctccttgggccgccacgtggtcttctggacgcagagcagccctt 361 |||||||||| ||||||||||||||||||||| ||| ||| ||||| || || || || | Sbjct: 2419 acatgcttgcctcgatctccttgggccgccacatggacttttggacacatagaagaccct 2360 Query: 362 ccttgcccgtggcgtaggtcatgcgcacctcccactgcagggacttcgccatgccttcga 421 | || ||| ||| |||||||||||| ||||||||||| || ||||| ||||||||| | Sbjct: 2359 cgttacccttggtgtaggtcatgcgaacctcccactgaagcgactttaccatgccttgca 2300 Query: 422 gcgctcttattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaatatcc 481 | | |||||||||| || | |||| ||| ||||| || ||||||||||||||||| | Sbjct: 2299 gttcgtttattgtctctgcattatccctcacaatcagctttccttctggcctcaatattc 2240 Query: 482 ggtcaacctcagcaaacactcccaacaatttacatctctttttgagctttgaaaagagat 541 ||| ||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 2239 tgtcgacctccgcaaacaccggcaacaatttgcatctcttttttagctttgagaagagat 2180 Query: 542 ggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagat 588 ||||||| || || ||||| || |||||||||||||||||||||||| Sbjct: 2179 ggtctgcatgcagaaggtcgtatgttctcgggtaagtgctgaaagat 2133
>dbj|AK119636.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F03, full insert sequence Length = 2826 Score = 196 bits (99), Expect = 6e-47 Identities = 240/287 (83%) Strand = Plus / Minus Query: 302 acatgcttgcttcgatctccttgggccgccacgtggtcttctggacgcagagcagccctt 361 |||||||||| ||||||||||||||||||||| ||| ||| ||||| || || || || | Sbjct: 2557 acatgcttgcctcgatctccttgggccgccacatggacttttggacacatagaagaccct 2498 Query: 362 ccttgcccgtggcgtaggtcatgcgcacctcccactgcagggacttcgccatgccttcga 421 | || ||| ||| |||||||||||| ||||||||||| || ||||| ||||||||| | Sbjct: 2497 cgttacccttggtgtaggtcatgcgaacctcccactgaagcgactttaccatgccttgca 2438 Query: 422 gcgctcttattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaatatcc 481 | | |||||||||| || | |||| ||| ||||| || ||||||||||||||||| | Sbjct: 2437 gttcgtttattgtctctgcattatccctcacaatcagctttccttctggcctcaatattc 2378 Query: 482 ggtcaacctcagcaaacactcccaacaatttacatctctttttgagctttgaaaagagat 541 ||| ||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 2377 tgtcgacctccgcaaacaccggcaacaatttgcatctcttttttagctttgagaagagat 2318 Query: 542 ggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagat 588 ||||||| || || ||||| || |||||||||||||||||||||||| Sbjct: 2317 ggtctgcatgcagaaggtcgtatgttctcgggtaagtgctgaaagat 2271
>dbj|AK100713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115H24, full insert sequence Length = 2988 Score = 196 bits (99), Expect = 6e-47 Identities = 240/287 (83%) Strand = Plus / Minus Query: 302 acatgcttgcttcgatctccttgggccgccacgtggtcttctggacgcagagcagccctt 361 |||||||||| ||||||||||||||||||||| ||| ||| ||||| || || || || | Sbjct: 2723 acatgcttgcctcgatctccttgggccgccacatggacttttggacacatagaagaccct 2664 Query: 362 ccttgcccgtggcgtaggtcatgcgcacctcccactgcagggacttcgccatgccttcga 421 | || ||| ||| |||||||||||| ||||||||||| || ||||| ||||||||| | Sbjct: 2663 cgttacccttggtgtaggtcatgcgaacctcccactgaagcgactttaccatgccttgca 2604 Query: 422 gcgctcttattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaatatcc 481 | | |||||||||| || | |||| ||| ||||| || ||||||||||||||||| | Sbjct: 2603 gttcgtttattgtctctgcattatccctcacaatcagctttccttctggcctcaatattc 2544 Query: 482 ggtcaacctcagcaaacactcccaacaatttacatctctttttgagctttgaaaagagat 541 ||| ||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 2543 tgtcgacctccgcaaacaccggcaacaatttgcatctcttttttagctttgagaagagat 2484 Query: 542 ggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagat 588 ||||||| || || ||||| || |||||||||||||||||||||||| Sbjct: 2483 ggtctgcatgcagaaggtcgtatgttctcgggtaagtgctgaaagat 2437
>gb|AY104480.1| Zea mays PCO099563 mRNA sequence Length = 2194 Score = 147 bits (74), Expect = 5e-32 Identities = 218/266 (81%) Strand = Plus / Minus Query: 322 ttgggccgccacgtggtcttctggacgcagagcagcccttccttgcccgtggcgtaggtc 381 |||||||||||| | | ||||| |||||||||||| || || ||||| ||| ||||||| Sbjct: 1883 ttgggccgccacatcgacttctcgacgcagagcaggccctcgctgcccttggtgtaggtc 1824 Query: 382 atgcgcacctcccactgcagggacttcgccatgccttcgagcgctcttattgtctccgcg 441 || |||||||||||||||| |||||| ||||||| || ||| | |||| || |||||| Sbjct: 1823 atccgcacctcccactgcacggacttggccatgctctccagctcatttatcgtgtccgcg 1764 Query: 442 tcgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctcagcaaacact 501 ||||| ||||||||| || || | |||||||| || ||||| ||||| || || ||| Sbjct: 1763 gtgtccctcacgatcagcttgccctgtggcctcagtacacggtcgacctcggcgaaaact 1704 Query: 502 cccaacaatttacatctctttttgagctttgaaaagagatggtctgcgtgtaggaggtca 561 | || ||| ||||||||| |||||||||| || |||||||| ||||| || |||||| Sbjct: 1703 gcagccagtttgcatctctttctgagctttgagaacagatggtccgcgtgcagaaggtca 1644 Query: 562 tacgttctcgggtaagtgctgaaaga 587 |||||||| ||||||||||||||||| Sbjct: 1643 tacgttcttgggtaagtgctgaaaga 1618
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 113 bits (57), Expect = 7e-22 Identities = 177/217 (81%) Strand = Plus / Plus Query: 302 acatgcttgcttcgatctccttgggccgccacgtggtcttctggacgcagagcagccctt 361 |||||||||| ||||||||||||||||||||| ||| ||| ||||| || || || || | Sbjct: 38379953 acatgcttgcctcgatctccttgggccgccacatggacttttggacacatagaagaccct 38380012 Query: 362 ccttgcccgtggcgtaggtcatgcgcacctcccactgcagggacttcgccatgccttcga 421 | || ||| ||| |||||||||||| ||||||||||| || ||||| ||||||||| | Sbjct: 38380013 cgttacccttggtgtaggtcatgcgaacctcccactgaagcgactttaccatgccttgca 38380072 Query: 422 gcgctcttattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaatatcc 481 | | |||||||||| || | |||| ||| ||||| || ||||||||||||||||| | Sbjct: 38380073 gttcgtttattgtctctgcattatccctcacaatcagctttccttctggcctcaatattc 38380132 Query: 482 ggtcaacctcagcaaacactcccaacaatttacatct 518 ||| ||||| |||||||| ||||||||| ||||| Sbjct: 38380133 tgtcgacctccgcaaacaccggcaacaatttgcatct 38380169 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 517 ctctttttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaa 576 |||||||| |||||||| |||||||||||||| || || ||||| || |||||||||||| Sbjct: 38380349 ctcttttttagctttgagaagagatggtctgcatgcagaaggtcgtatgttctcgggtaa 38380408 Query: 577 gtgctgaaagat 588 |||||||||||| Sbjct: 38380409 gtgctgaaagat 38380420
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 113 bits (57), Expect = 7e-22 Identities = 177/217 (81%) Strand = Plus / Plus Query: 302 acatgcttgcttcgatctccttgggccgccacgtggtcttctggacgcagagcagccctt 361 |||||||||| ||||||||||||||||||||| ||| ||| ||||| || || || || | Sbjct: 140778 acatgcttgcctcgatctccttgggccgccacatggacttttggacacatagaagaccct 140837 Query: 362 ccttgcccgtggcgtaggtcatgcgcacctcccactgcagggacttcgccatgccttcga 421 | || ||| ||| |||||||||||| ||||||||||| || ||||| ||||||||| | Sbjct: 140838 cgttacccttggtgtaggtcatgcgaacctcccactgaagcgactttaccatgccttgca 140897 Query: 422 gcgctcttattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaatatcc 481 | | |||||||||| || | |||| ||| ||||| || ||||||||||||||||| | Sbjct: 140898 gttcgtttattgtctctgcattatccctcacaatcagctttccttctggcctcaatattc 140957 Query: 482 ggtcaacctcagcaaacactcccaacaatttacatct 518 ||| ||||| |||||||| ||||||||| ||||| Sbjct: 140958 tgtcgacctccgcaaacaccggcaacaatttgcatct 140994 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 517 ctctttttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaa 576 |||||||| |||||||| |||||||||||||| || || ||||| || |||||||||||| Sbjct: 141174 ctcttttttagctttgagaagagatggtctgcatgcagaaggtcgtatgttctcgggtaa 141233 Query: 577 gtgctgaaagat 588 |||||||||||| Sbjct: 141234 gtgctgaaagat 141245
>emb|CT009521.5| M.truncatula DNA sequence from clone MTH2-81E13 on chromosome 3, complete sequence Length = 56728 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 317 tctccttgggccgccacgtggtcttctggacgcagagcagcccttccttgcccgtggcgt 376 ||||||| |||||||| |||| ||||||||| || | || || ||||| || ||| || Sbjct: 16453 tctccttaggccgccaggtggacttctggacacataacaaaccctccttatccttggagt 16394 Query: 377 aggtcatgcgcacctcccactgcagggactt 407 |||||||||| ||||||||||||| |||||| Sbjct: 16393 aggtcatgcgaacctcccactgcatggactt 16363
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 522 tttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgct 581 ||||||||| || ||||||||||| || || |||||||| || | ||||||||| ||||| Sbjct: 148181 tttgagcttggagaagagatggtcggcatggaggaggtcgtaggatctcgggtaggtgct 148122 Query: 582 gaa 584 ||| Sbjct: 148121 gaa 148119
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 522 tttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgct 581 ||||||||| || ||||||||||| || || |||||||| || | ||||||||| ||||| Sbjct: 18034 tttgagcttggagaagagatggtcggcatggaggaggtcgtaggatctcgggtaggtgct 17975 Query: 582 gaa 584 ||| Sbjct: 17974 gaa 17972
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 522 tttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgct 581 ||||||||| || ||||||||||| || || |||||||| || | ||||||||| ||||| Sbjct: 4366671 tttgagcttggagaagagatggtcggcatggaggaggtcgtaggatctcgggtaggtgct 4366612 Query: 582 gaa 584 ||| Sbjct: 4366611 gaa 4366609
>dbj|AK109545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E05, full insert sequence Length = 3015 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 522 tttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgct 581 ||||||||| || ||||||||||| || || |||||||| || | ||||||||| ||||| Sbjct: 2589 tttgagcttggagaagagatggtcggcatggaggaggtcgtaggatctcgggtaggtgct 2530 Query: 582 gaa 584 ||| Sbjct: 2529 gaa 2527
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 522 tttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgct 581 ||||||||| || ||||||||||| || || |||||||| || | ||||||||| ||||| Sbjct: 4375365 tttgagcttggagaagagatggtcggcatggaggaggtcgtaggatctcgggtaggtgct 4375306 Query: 582 gaa 584 ||| Sbjct: 4375305 gaa 4375303
>ref|NM_106474.4| Arabidopsis thaliana unknown protein AT1G78240 mRNA, complete cds Length = 2760 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 535 aagagatggtctgcgtgtaggaggtcatacgttctcgggtaagt 578 ||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 2175 aagagattgtctgcatgtaccaggtcatatgttctcgggtaagt 2132
>gb|AF360139.1| Arabidopsis thaliana At1g78240 mRNA sequence Length = 2832 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 535 aagagatggtctgcgtgtaggaggtcatacgttctcgggtaagt 578 ||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 2239 aagagattgtctgcatgtaccaggtcatatgttctcgggtaagt 2196
>emb|BX814932.1|CNS0ADZ2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2709 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 535 aagagatggtctgcgtgtaggaggtcatacgttctcgggtaagt 578 ||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 2172 aagagattgtctgcatgtaccaggtcatatgttctcgggtaagt 2129
>gb|AC012680.5|AC012680 Arabidopsis thaliana chromosome 1 BAC T11I11 genomic sequence, complete sequence Length = 69506 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 535 aagagatggtctgcgtgtaggaggtcatacgttctcgggtaagt 578 ||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 68256 aagagattgtctgcatgtaccaggtcatatgttctcgggtaagt 68299
>gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana BAC F3F9 from chromosome I, complete sequence Length = 95769 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 535 aagagatggtctgcgtgtaggaggtcatacgttctcgggtaagt 578 ||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 92942 aagagattgtctgcatgtaccaggtcatatgttctcgggtaagt 92899
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence Length = 105215 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 441 gtcgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctc 491 |||||||||||||||||| ||||| | ||||||| |||||||| ||||| Sbjct: 95194 gtcgtcccgcacgatcagcttcccgttcggcctcaggatccggtccacctc 95144 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 313 tcgatctccttgggccgccacgtggtcttc 342 ||||||||| ||||||||||||| |||||| Sbjct: 95322 tcgatctccgtgggccgccacgtcgtcttc 95293
>emb|BX248137.9| Zebrafish DNA sequence from clone DKEY-19L19, complete sequence Length = 209896 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 109 cattacattcattttacaacaaatgt 134 |||| ||||||||||||||||||||| Sbjct: 176545 catttcattcattttacaacaaatgt 176520
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 523 ttgagctttgaaaagagatggtctgcgtgtaggaggtc 560 |||||||| || ||||||||||| ||||| |||||||| Sbjct: 3969712 ttgagcttggagaagagatggtcggcgtggaggaggtc 3969675 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 319 tccttgggccgccacgtggtcttctggacgcagagca 355 ||||||||||||||| | ||||||| | ||||||||| Sbjct: 3970088 tccttgggccgccacatcgtcttctcggcgcagagca 3970052 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 443 cgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctc 491 |||||||||||||||| ||||| || |||| || |||||||| ||||| Sbjct: 3969964 cgtcccgcacgatcagcttcccctccggccgcaggatccggtccacctc 3969916
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 523 ttgagctttgaaaagagatggtctgcgtgtaggaggtc 560 |||||||| || ||||||||||| ||||| |||||||| Sbjct: 3969686 ttgagcttggagaagagatggtcggcgtggaggaggtc 3969649 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 319 tccttgggccgccacgtggtcttctggacgcagagca 355 ||||||||||||||| | ||||||| | ||||||||| Sbjct: 3970062 tccttgggccgccacatcgtcttctcggcgcagagca 3970026 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 443 cgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctc 491 |||||||||||||||| ||||| || |||| || |||||||| ||||| Sbjct: 3969938 cgtcccgcacgatcagcttcccctccggccgcaggatccggtccacctc 3969890
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 523 ttgagctttgaaaagagatggtctgcgtgtaggaggtc 560 |||||||| || ||||||||||| ||||| |||||||| Sbjct: 6122 ttgagcttggagaagagatggtcggcgtggaggaggtc 6085 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 319 tccttgggccgccacgtggtcttctggacgcagagca 355 ||||||||||||||| | ||||||| | ||||||||| Sbjct: 6498 tccttgggccgccacatcgtcttctcggcgcagagca 6462 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 443 cgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctc 491 |||||||||||||||| ||||| || |||| || |||||||| ||||| Sbjct: 6374 cgtcccgcacgatcagcttcccctccggccgcaggatccggtccacctc 6326
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 523 ttgagctttgaaaagagatggtctgcgtgtaggaggtc 560 |||||||| || ||||||||||| ||||| |||||||| Sbjct: 131688 ttgagcttggagaagagatggtcggcgtggaggaggtc 131651 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 319 tccttgggccgccacgtggtcttctggacgcagagca 355 ||||||||||||||| | ||||||| | ||||||||| Sbjct: 132064 tccttgggccgccacatcgtcttctcggcgcagagca 132028 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 443 cgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctc 491 |||||||||||||||| ||||| || |||| || |||||||| ||||| Sbjct: 131940 cgtcccgcacgatcagcttcccctccggccgcaggatccggtccacctc 131892
>gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, complete sequence Length = 194261 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 40255 cgcagagcagcccttccttgc 40235
>emb|CR940310.6| M.truncatula DNA sequence from clone MTH2-5D8 on chromosome 3, complete sequence Length = 121689 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 gaaaaacacatacatgattctacag 188 ||||||||||| ||||||||||||| Sbjct: 37638 gaaaaacacattcatgattctacag 37614
>gb|AC003119.1|HUAC003119 Human Chromosome 16 BAC clone CIT987SK-27D10, complete sequence Length = 88036 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 tccaagcaaaagaaagaatga 157 ||||||||||||||||||||| Sbjct: 23224 tccaagcaaaagaaagaatga 23204
>emb|AL591292.1| Human DNA sequence from clone RP11-99J16 on chromosome 1 Contains the 3' end of the TTC13 gene for tetratricopeptide repeat domain 13, complete sequence Length = 57697 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 cctcagcaaacactcccaaca 508 ||||||||||||||||||||| Sbjct: 45983 cctcagcaaacactcccaaca 46003
>emb|X89383.1|RNSNF1KIN R.norvegicus mRNA for SNF1-related kinase Length = 3004 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 2355 cgcagagcagcccttccttgc 2335
>gb|AF387809.2| Mus musculus strain BALB/c SNF-1 related kinase (Snrk) mRNA, complete cds Length = 4708 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 2360 cgcagagcagcccttccttgc 2340
>gb|AC162794.4| Mus musculus chromosome 3, clone RP24-120B22, complete sequence Length = 139773 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 aagcaaaagaaagaatgaaag 160 ||||||||||||||||||||| Sbjct: 81804 aagcaaaagaaagaatgaaag 81784
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 aagcaaaagaaagaatgaaaggccgaaaa 168 ||||||||||||||| |||||||| |||| Sbjct: 1363005 aagcaaaagaaagaaagaaaggccaaaaa 1362977
>tpg|BK001429.1| TPA: TPA_exp: Homo sapiens NOELIN3 (OLFM3) gene, complete cds; alternatively spliced Length = 195421 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tctctttttgagctttgaaaa 536 ||||||||||||||||||||| Sbjct: 57518 tctctttttgagctttgaaaa 57498
>dbj|AK053203.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030034B15 product:SNF-1 RELATED KINASE homolog [Mus musculus], full insert sequence Length = 1992 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 1315 cgcagagcagcccttccttgc 1295
>gb|BC094658.1| Mus musculus SNF related kinase, mRNA (cDNA clone MGC:101984 IMAGE:5721174), complete cds Length = 4740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 2388 cgcagagcagcccttccttgc 2368
>ref|NM_138833.1| Rattus norvegicus SNF related kinase (Snrk), mRNA Length = 3004 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 2355 cgcagagcagcccttccttgc 2335
>ref|XM_579653.1| PREDICTED: Rattus norvegicus hypothetical LOC367880 (LOC367880), mRNA Length = 2806 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 2160 cgcagagcagcccttccttgc 2140
>ref|XM_579652.1| PREDICTED: Rattus norvegicus SNF related kinase (Snrk), mRNA Length = 2270 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 1621 cgcagagcagcccttccttgc 1601
>dbj|AK211321.1| Mus musculus cDNA, clone:Y2G0121F20, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063498, based on BLAT search Length = 400 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 99 cgcagagcagcccttccttgc 79
>gb|DQ020487.1| Sus scrofa clone BAC KNP_375G9, complete sequence Length = 142071 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 caacctcagcaaacactccca 505 ||||||||||||||||||||| Sbjct: 122796 caacctcagcaaacactccca 122816
>ref|NM_212200.1| Eremothecium gossypii AFR517Cp (AFR517C), mRNA Length = 2616 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 140 aagcaaaagaaagaatgaaaggccgaaaa 168 ||||||||||||||| |||||||| |||| Sbjct: 1333 aagcaaaagaaagaaagaaaggccaaaaa 1361
>gb|BC020189.1| Mus musculus SNF related kinase, mRNA (cDNA clone MGC:28970 IMAGE:4482701), complete cds Length = 3101 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 2402 cgcagagcagcccttccttgc 2382
>ref|NM_133741.1| Mus musculus SNF related kinase (Snrk), mRNA Length = 4708 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 2360 cgcagagcagcccttccttgc 2340
>gb|AC120394.10| Mus musculus chromosome 9, clone RP24-325N9, complete sequence Length = 206641 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cgcagagcagcccttccttgc 367 ||||||||||||||||||||| Sbjct: 184055 cgcagagcagcccttccttgc 184035
>emb|AL356280.21| Human DNA sequence from clone RP11-82O2 on chromosome 1 Contains the 5' end of the OLFM3 gene for olfactomedin 3 and a DNAJ family pseudogene, complete sequence Length = 173251 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tctctttttgagctttgaaaa 536 ||||||||||||||||||||| Sbjct: 94004 tctctttttgagctttgaaaa 94024
>ref|NM_125799.2| Arabidopsis thaliana unknown protein AT5G64030 mRNA, complete cds Length = 3031 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 429 tattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaa 476 |||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct: 2672 tattgtttccgcatcgtctcgaactatcagtttcccttccggtctcaa 2625
>gb|AC104930.9| Mus musculus chromosome 7, clone RP24-224C21, complete sequence Length = 156052 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 ggtcttctggacgcagagcagccc 359 |||||||||||| ||||||||||| Sbjct: 34857 ggtcttctggacacagagcagccc 34880
>gb|BT014452.1| Lycopersicon esculentum clone 133778R, mRNA sequence Length = 2259 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 aggtcatacgttctcgggta 575 |||||||||||||||||||| Sbjct: 1645 aggtcatacgttctcgggta 1626
>gb|AY347745.1| Physcomitrella patens Snf1 related kinase 1 (SNF1b) gene, complete cds Length = 5107 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 cattttacaacaaatgttgtccaa 141 |||||||||| ||||||||||||| Sbjct: 2937 cattttacaagaaatgttgtccaa 2914
>ref|XM_993959.1| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1 (Golgb1), mRNA Length = 10907 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 cttctggacgcagagcagcccttccttg 366 |||||||| |||||||||||| |||||| Sbjct: 475 cttctggaggcagagcagcccctccttg 448
>ref|XM_001001861.1| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 9 (Golgb1), mRNA Length = 13115 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 cttctggacgcagagcagcccttccttg 366 |||||||| |||||||||||| |||||| Sbjct: 2770 cttctggaggcagagcagcccctccttg 2743
>ref|XM_916950.2| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 7 (Golgb1), mRNA Length = 10927 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 cttctggacgcagagcagcccttccttg 366 |||||||| |||||||||||| |||||| Sbjct: 582 cttctggaggcagagcagcccctccttg 555
>ref|XM_901689.2| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 4 (Golgb1), mRNA Length = 11008 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 cttctggacgcagagcagcccttccttg 366 |||||||| |||||||||||| |||||| Sbjct: 576 cttctggaggcagagcagcccctccttg 549
>ref|XM_148244.7| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 1 (Golgb1), mRNA Length = 11104 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 cttctggacgcagagcagcccttccttg 366 |||||||| |||||||||||| |||||| Sbjct: 672 cttctggaggcagagcagcccctccttg 645
>ref|XM_901694.2| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 6 (Golgb1), mRNA Length = 10907 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 cttctggacgcagagcagcccttccttg 366 |||||||| |||||||||||| |||||| Sbjct: 475 cttctggaggcagagcagcccctccttg 448
>emb|CR382370.13| Zebrafish DNA sequence from clone DKEY-22O12 in linkage group 1, complete sequence Length = 257504 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 229746 ttacagtacagcattacatt 229765
>emb|CR388412.9| Zebrafish DNA sequence from clone CH211-69G13 in linkage group 5, complete sequence Length = 158289 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 45457 ttacagtacagcattacatt 45438
>emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chromosome X Contains a likely ortholog of mouse hepatoma-derived growth factor related protein 3 pseudogene (HDGFRP3), a novel protein similar to PAGE-5 protein (LOC203569), a novel protein similar to PAGE-5 protein (LOC139795), gene FLJ20434, a cytochrome c oxidase I (MTCO1) pseudogene, a G antigen, family D pseudogene and a CpG island, complete sequence Length = 130005 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 aagcaaaagaaagaatgaaa 159 |||||||||||||||||||| Sbjct: 6596 aagcaaaagaaagaatgaaa 6577
>emb|AL513082.10| Human DNA sequence from clone RP11-229N15 on chromosome Xq24-25 Contains a ribosomal protein L3 (RPL3) pseudogene, complete sequence Length = 137154 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccaagcaaaagaaagaatga 157 |||||||||||||||||||| Sbjct: 103487 ccaagcaaaagaaagaatga 103468
>emb|BX908783.8| Zebrafish DNA sequence from clone DKEY-86M2 in linkage group 25, complete sequence Length = 216800 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 121961 ttacagtacagcattacatt 121980
>emb|BX323796.14| Zebrafish DNA sequence from clone DKEY-106N21 in linkage group 25, complete sequence Length = 204383 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 123959 ttacagtacagcattacatt 123940
>emb|BX649627.10| Zebrafish DNA sequence from clone DKEY-78B7 in linkage group 3, complete sequence Length = 92147 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 80765 ttacagtacagcattacatt 80746
>emb|BX511176.6| Zebrafish DNA sequence from clone CH211-8C17 in linkage group 3, complete sequence Length = 116813 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 103428 ttacagtacagcattacatt 103409
>gb|AC154763.2| Mus musculus BAC clone RP24-422J16 from chromosome 16, complete sequence Length = 156818 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 cttctggacgcagagcagcccttccttg 366 |||||||| |||||||||||| |||||| Sbjct: 21425 cttctggaggcagagcagcccctccttg 21398
>emb|CR556722.7| Zebrafish DNA sequence from clone CH211-195N12 in linkage group 13, complete sequence Length = 205873 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 caatgcatttgcctttttta 213 |||||||||||||||||||| Sbjct: 163844 caatgcatttgcctttttta 163863
>gb|AY125524.1| Arabidopsis thaliana AT5g64030/MBM17_13 mRNA, complete cds Length = 2856 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 429 tattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaa 476 |||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct: 2510 tattgtttccgcatcgtctcgaactatcagtttcccttccggtctcaa 2463
>emb|BX000435.21| Zebrafish DNA sequence from clone DKEY-12L8 in linkage group 1, complete sequence Length = 201673 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 153044 ttacagtacagcattacatt 153025
>gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, complete sequence Length = 110184 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gcacctcccactgcagggac 405 |||||||||||||||||||| Sbjct: 32046 gcacctcccactgcagggac 32027
>gb|AC150559.31| Medicago truncatula clone mth2-67j8, complete sequence Length = 107641 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ccttttttagcatcaacaagaatc 228 ||||||| |||||||||||||||| Sbjct: 97690 cctttttcagcatcaacaagaatc 97667
>emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, complete sequence Length = 178457 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 caatgcatttgcctttttta 213 |||||||||||||||||||| Sbjct: 27275 caatgcatttgcctttttta 27294
>emb|BX640577.17| Zebrafish DNA sequence from clone DKEY-117O14 in linkage group 14, complete sequence Length = 214178 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 145384 ttacagtacagcattacatt 145403
>gb|AC090573.6| Homo sapiens chromosome 8, clone RP11-440B23, complete sequence Length = 204032 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gtccaagcaaaagaaagaat 155 |||||||||||||||||||| Sbjct: 107036 gtccaagcaaaagaaagaat 107055
>dbj|AK155415.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630225N06 product:hypothetical protein, full insert sequence Length = 1881 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 cttctggacgcagagcagcccttccttg 366 |||||||| |||||||||||| |||||| Sbjct: 1828 cttctggaggcagagcagcccctccttg 1801
>gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence Length = 189732 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agcaaaagaaagaatgaaag 160 |||||||||||||||||||| Sbjct: 68582 agcaaaagaaagaatgaaag 68601
>gb|AC155930.3| Mus musculus BAC clone RP23-412K9 from chromosome 7, complete sequence Length = 187418 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 ggtcttctggacgcagagcagccc 359 |||||||||||| ||||||||||| Sbjct: 32367 ggtcttctggacacagagcagccc 32344
>dbj|AK020091.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330407A06 product:similar to GIANTIN (GOLGI COMPLEX-ASSOCIATED PROTEIN OF 364 KDA) (GCP364) [Rattus norvegicus], full insert sequence Length = 507 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 cttctggacgcagagcagcccttccttg 366 |||||||| |||||||||||| |||||| Sbjct: 454 cttctggaggcagagcagcccctccttg 427
>emb|BX833001.1|CNS0A1QZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL29ZA09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 439 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 429 tattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaa 476 |||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct: 90 tattgtttccgcatcgtctcgaactatcagtttcccttccggtctcaa 43
>gb|BT003013.1| Arabidopsis thaliana At5g64030/MBM17_13 gene, complete cds Length = 2490 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 429 tattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaa 476 |||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct: 2349 tattgtttccgcatcgtctcgaactatcagtttcccttccggtctcaa 2302
>gb|AC008394.3|AC008394 Homo sapiens chromosome 5 clone CTC_242N15, complete sequence Length = 171545 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ttctacagctgcacaatgcatttg 204 |||||||||||||||||| ||||| Sbjct: 157682 ttctacagctgcacaatgtatttg 157659
>emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in linkage group 7, complete sequence Length = 199752 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ttttagcatcaacaagaatcatgt 232 |||| ||||||||||||||||||| Sbjct: 47092 ttttggcatcaacaagaatcatgt 47115
>dbj|AB008266.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHJ24 Length = 48622 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 429 tattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaa 476 |||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct: 1522 tattgtttccgcatcgtctcgaactatcagtttcccttccggtctcaa 1475
>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20 Length = 91193 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 aagcaaaagaaagaatgaaa 159 |||||||||||||||||||| Sbjct: 64454 aagcaaaagaaagaatgaaa 64435
>dbj|AK111175.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-F01, full insert sequence Length = 3120 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 agatggtctgcgtgtaggag 557 |||||||||||||||||||| Sbjct: 693 agatggtctgcgtgtaggag 674
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 attacattcattttacaacaaatg 133 |||||||||||||||||| ||||| Sbjct: 381838 attacattcattttacaagaaatg 381861
>emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in linkage group 19, complete sequence Length = 166128 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 90961 ttacagtacagcattacatt 90942
>emb|BX004885.4| Zebrafish DNA sequence from clone CH211-103L6, complete sequence Length = 187201 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 39594 ttacagtacagcattacatt 39613
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 aggtcatgcgcacctcccac 396 |||||||||||||||||||| Sbjct: 2645279 aggtcatgcgcacctcccac 2645298
>emb|CR762424.33| Zebrafish DNA sequence from clone RP71-52E8 in linkage group 22, complete sequence Length = 178229 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ttacagtacagcattacatt 117 |||||||||||||||||||| Sbjct: 16976 ttacagtacagcattacatt 16995 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,450,932 Number of Sequences: 3902068 Number of extensions: 5450932 Number of successful extensions: 112411 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112008 Number of HSP's gapped (non-prelim): 397 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
