ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21k09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467558.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
2ref|XM_506948.1| PREDICTED Oryza sativa (japonica cultivar-group... 88 4e-14
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
4dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
5dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
6dbj|AK104276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
7dbj|AK071759.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
8gb|AY111756.1| Zea mays CL26659_-2 mRNA sequence 66 2e-07
9gb|BC003318.1| Mus musculus PRP40 pre-mRNA processing factor 40 ... 44 0.58
10ref|NM_018785.1| Mus musculus PRP40 pre-mRNA processing factor 4... 44 0.58
11dbj|AK087963.1| Mus musculus 2 days neonate thymus thymic cells ... 44 0.58
12dbj|AB125135.1| Uncultured rumen bacterium mcrA gene for methyl-... 44 0.58
13gb|AF135439.1|AF135439 Mus musculus formin binding protein 11 (F... 44 0.58
14emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chr... 44 0.58
15ref|XM_322387.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.3
16ref|XM_952680.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.3
17ref|XM_781435.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.3
18gb|AC158389.2| Mus musculus BAC clone RP24-476G13 from chromosom... 42 2.3
19ref|NM_001015810.1| Xenopus tropicalis MGC97602 protein (MGC9760... 42 2.3
20emb|BX822017.1|CNS0A8BK Arabidopsis thaliana Full-length cDNA Co... 42 2.3
21gb|AC159396.2| Physcomitrella patens clone JGIASYB-5E19, complet... 42 2.3
22gb|AC006091.10|AC006091 Drosophila melanogaster, chromosome 3R, ... 42 2.3
23gb|BC090091.1| Xenopus tropicalis MGC97602 protein, mRNA (cDNA c... 42 2.3
24emb|BX649345.16| Zebrafish DNA sequence from clone DKEY-161F11 i... 42 2.3
25gb|AE003725.2| Drosophila melanogaster chromosome 3R, section 63... 42 2.3
26dbj|AB090821.1| Anopheles gambiae retrotransposon R7Ag2 DNA, com... 42 2.3
27gb|AC147719.1| Gallus gallus BAC clone CH261-22J12 from chromoso... 42 2.3
28emb|Z50097.1|DMRNAHDCP Drosophila melanogaster mRNA for headcase... 42 2.3
29gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 9.0
30ref|NM_126244.2| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1)... 40 9.0
31ref|NM_179594.1| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1)... 40 9.0
32ref|NM_201667.1| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1)... 40 9.0
33gb|AC147352.2| Xenopus tropicalis clone CH216-157J16, complete s... 40 9.0
34gb|AC160334.2| Mus musculus BAC clone RP23-37D14 from chromosome... 40 9.0
35gb|AC165072.13| Mus musculus chromosome 18, clone RP23-345E17, c... 40 9.0
36gb|AC122410.4| Mus musculus BAC clone RP24-142A1 from chromosome... 40 9.0
37ref|XM_814820.1| Trypanosoma cruzi strain CL Brener double-stran... 40 9.0
38emb|CR674499.2|CNS0FJEX Tetraodon nigroviridis full-length cDNA 40 9.0
39emb|BX005072.20| Human DNA sequence from clone XXyac-59F3 on chr... 40 9.0
40emb|AL691522.4| Human DNA sequence from clone RP11-16I11 on chro... 40 9.0
41emb|AL450334.15| Human DNA sequence from clone RP11-556L1 on chr... 40 9.0
42gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence 40 9.0
43gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 9.0
44ref|XM_968841.1| PREDICTED: Tribolium castaneum similar to High ... 40 9.0
45emb|BX060025.1|CNS09IH9 Single read from an extremity of a full-... 40 9.0
46emb|BX060024.1|CNS09IH8 Single read from an extremity of a full-... 40 9.0
47ref|XM_795071.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 9.0
48ref|XM_794797.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 9.0
49emb|AJ278530.1|ATH278530 Arabidopsis thaliana mRNA for putative ... 40 9.0
50emb|AJ278529.1|ATH278529 Arabidopsis thaliana mRNA for putative ... 40 9.0
51emb|AJ278528.1|ATH278528 Arabidopsis thaliana mRNA for putative ... 40 9.0
52emb|BX284629.6| Mouse DNA sequence from clone RP23-227J8 on chro... 40 9.0
53dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 9.0
54gb|AC121340.4| Homo sapiens X BAC RP13-928P6 (Roswell Park Cance... 40 9.0
55gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell... 40 9.0
56gb|AC010055.6| Drosophila melanogaster 3L BAC RP98-24H3 (Roswell... 40 9.0
57dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 40 9.0
58ref|NM_141028.1| Drosophila melanogaster CG12977-RA (CG12977), mRNA 40 9.0
59gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K3 map... 40 9.0
60gb|AC002387.3| Arabidopsis thaliana chromosome 2 clone F4L23 map... 40 9.0
61ref|NM_134961.1| Drosophila melanogaster CG10019-RA (CG10019), mRNA 40 9.0
62gb|AC013284.9| Homo sapiens chromosome 10 clone RP11-13E1, compl... 40 9.0
63gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, comp... 40 9.0
64dbj|AK140656.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 9.0
65gb|AC026739.7| Homo sapiens chromosome 5 clone CTD-2580L4, compl... 40 9.0
66gb|AC103362.7| Mus musculus chromosome 18, clone RP24-87N19, com... 40 9.0
67gb|AC092240.1|AC092240 Drosophila melanogaster, chromosome 2L, r... 40 9.0
68emb|AL954370.3| Mouse DNA sequence from clone RP23-180P4 on chro... 40 9.0
69gb|AC140846.3| Homo sapiens X PAC RP1-93D11 (Roswell Park Cancer... 40 9.0
70gb|AC154682.2| Mus musculus BAC clone RP24-315N18 from chromosom... 40 9.0
71gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, comple... 40 9.0
72gb|BT024351.1| Drosophila melanogaster IP09244 full insert cDNA 40 9.0
73gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 9.0
74ref|XM_309758.2| Anopheles gambiae str. PEST ENSANGP00000012428 ... 40 9.0
75emb|CT009542.22| Pig DNA sequence from clone CH242-272H8 on chro... 40 9.0
76gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region fro... 40 9.0
77gb|AC174449.2| Mus musculus BAC clone RP23-338O19 from chromosom... 40 9.0
78gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74... 40 9.0
79gb|AE003578.3| Drosophila melanogaster chromosome 2L, section 13... 40 9.0
80gb|AC101682.8| Mus musculus chromosome 18, clone RP23-183C23, co... 40 9.0
81gb|DQ232601.1| Receiver Vector p415-CYC1-CRE1a-TR-SSRE-GFP, comp... 40 9.0
82gb|DQ232600.1| Receiver Vector p415-CYC1-CRE1a-SSRE-GFP, complet... 40 9.0
83gb|AC153945.5| Mus musculus 10 BAC RP24-501G17 (Roswell Park Can... 40 9.0
84gb|AC005149.1|AC005149 Drosophila melanogaster DNA sequence (P1s... 40 9.0
85gb|AC145913.3| Gallus gallus BAC clone CH261-50N9 from chromosom... 40 9.0
86gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 9.0
87emb|AL929335.9| Zebrafish DNA sequence from clone CH211-9D9, com... 40 9.0
88dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 9.0
89gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 9.0
90gb|CP000036.1| Shigella boydii Sb227, complete genome 40 9.0
91gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 9.0
92dbj|AB046871.1| Arabidopsis thaliana AHK4 mRNA for histidine kin... 40 9.0
93dbj|AB049935.1| Arabidopsis thaliana mRNA for cytokinin receptor... 40 9.0
94dbj|AB049934.1| Arabidopsis thaliana mRNA for cytokinin receptor... 40 9.0
95dbj|D84362.1|ECOGNTR Escherichia coli DNA for repressor, low aff... 40 9.0 
>ref|XM_467558.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1454

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/110 (86%), Gaps = 9/110 (8%)
 Strand = Plus / Minus

                                                                        
Query: 464  gctcttgtggttctgctcagctgtaatgctcttgtcctgttttccttctggcagatcact 523
            |||||| ||||||||||||||||| |||||||| ||||     |||| ||||||||||||
Sbjct: 1119 gctcttctggttctgctcagctgtgatgctcttatcct-----cctt-tggcagatcact 1066

                                                              
Query: 524  ttggcagcagctaaagcctcctccattgccctggcagcatccacctgcag 573
             ||||||||| ||||||||||   ||||||||||||||| ||||||||||
Sbjct: 1065 ctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgcag 1019



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Minus

                                                                        
Query: 298  tcttgtaggccctgaaagcgacgaacaccgttgcagcagctgcaacaacagcaagagtgg 357
            ||||||||  |||||||||||||||||||| ||||||||||||||||| | ||||||  |
Sbjct: 1288 tcttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcag 1229

                                                       
Query: 358  tgtaggtgtcagacctatcccaggtctcgaaccaggtgggcat 400
              |||||||||| | | ||||| ||||| |||||||| |||||
Sbjct: 1228 cataggtgtcagccgtttcccatgtctcaaaccaggttggcat 1186
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>ref|XM_506948.1| PREDICTED Oryza sativa (japonica cultivar-group), P0685G12.41 mRNA
          Length = 1611

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/110 (86%), Gaps = 9/110 (8%)
 Strand = Plus / Minus

                                                                        
Query: 464  gctcttgtggttctgctcagctgtaatgctcttgtcctgttttccttctggcagatcact 523
            |||||| ||||||||||||||||| |||||||| ||||     |||| ||||||||||||
Sbjct: 1118 gctcttctggttctgctcagctgtgatgctcttatcct-----cctt-tggcagatcact 1065

                                                              
Query: 524  ttggcagcagctaaagcctcctccattgccctggcagcatccacctgcag 573
             ||||||||| ||||||||||   ||||||||||||||| ||||||||||
Sbjct: 1064 ctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgcag 1018



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Minus

                                                                        
Query: 298  tcttgtaggccctgaaagcgacgaacaccgttgcagcagctgcaacaacagcaagagtgg 357
            ||||||||  |||||||||||||||||||| ||||||||||||||||| | ||||||  |
Sbjct: 1287 tcttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcag 1228

                                                       
Query: 358  tgtaggtgtcagacctatcccaggtctcgaaccaggtgggcat 400
              |||||||||| | | ||||| ||||| |||||||| |||||
Sbjct: 1227 cataggtgtcagccgtttcccatgtctcaaaccaggttggcat 1185
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/110 (86%), Gaps = 9/110 (8%)
 Strand = Plus / Plus

                                                                            
Query: 464      gctcttgtggttctgctcagctgtaatgctcttgtcctgttttccttctggcagatcact 523
                |||||| ||||||||||||||||| |||||||| ||||     |||| ||||||||||||
Sbjct: 30158739 gctcttctggttctgctcagctgtgatgctcttatcct-----cctt-tggcagatcact 30158792

                                                                  
Query: 524      ttggcagcagctaaagcctcctccattgccctggcagcatccacctgcag 573
                 ||||||||| ||||||||||   ||||||||||||||| ||||||||||
Sbjct: 30158793 ctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgcag 30158839



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                            
Query: 298      tcttgtaggccctgaaagcgacgaacaccgttgcagcagctgcaacaacagcaagagtgg 357
                ||||||||  |||||||||||||||||||| ||||||||||||||||| | ||||||  |
Sbjct: 30158570 tcttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcag 30158629

                                                           
Query: 358      tgtaggtgtcagacctatcccaggtctcgaaccaggtgggcat 400
                  |||||||||| | | ||||| ||||| |||||||| |||||
Sbjct: 30158630 cataggtgtcagccgtttcccatgtctcaaaccaggttggcat 30158672
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>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0685G12
          Length = 149155

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/110 (86%), Gaps = 9/110 (8%)
 Strand = Plus / Plus

                                                                          
Query: 464    gctcttgtggttctgctcagctgtaatgctcttgtcctgttttccttctggcagatcact 523
              |||||| ||||||||||||||||| |||||||| ||||     |||| ||||||||||||
Sbjct: 138336 gctcttctggttctgctcagctgtgatgctcttatcct-----cctt-tggcagatcact 138389

                                                                
Query: 524    ttggcagcagctaaagcctcctccattgccctggcagcatccacctgcag 573
               ||||||||| ||||||||||   ||||||||||||||| ||||||||||
Sbjct: 138390 ctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgcag 138436



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                          
Query: 298    tcttgtaggccctgaaagcgacgaacaccgttgcagcagctgcaacaacagcaagagtgg 357
              ||||||||  |||||||||||||||||||| ||||||||||||||||| | ||||||  |
Sbjct: 138167 tcttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcag 138226

                                                         
Query: 358    tgtaggtgtcagacctatcccaggtctcgaaccaggtgggcat 400
                |||||||||| | | ||||| ||||| |||||||| |||||
Sbjct: 138227 cataggtgtcagccgtttcccatgtctcaaaccaggttggcat 138269
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>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_G07
          Length = 93240

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/110 (86%), Gaps = 9/110 (8%)
 Strand = Plus / Plus

                                                                         
Query: 464   gctcttgtggttctgctcagctgtaatgctcttgtcctgttttccttctggcagatcact 523
             |||||| ||||||||||||||||| |||||||| ||||     |||| ||||||||||||
Sbjct: 31443 gctcttctggttctgctcagctgtgatgctcttatcct-----cctt-tggcagatcact 31496

                                                               
Query: 524   ttggcagcagctaaagcctcctccattgccctggcagcatccacctgcag 573
              ||||||||| ||||||||||   ||||||||||||||| ||||||||||
Sbjct: 31497 ctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgcag 31543



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                         
Query: 298   tcttgtaggccctgaaagcgacgaacaccgttgcagcagctgcaacaacagcaagagtgg 357
             ||||||||  |||||||||||||||||||| ||||||||||||||||| | ||||||  |
Sbjct: 31274 tcttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcag 31333

                                                        
Query: 358   tgtaggtgtcagacctatcccaggtctcgaaccaggtgggcat 400
               |||||||||| | | ||||| ||||| |||||||| |||||
Sbjct: 31334 cataggtgtcagccgtttcccatgtctcaaaccaggttggcat 31376
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>dbj|AK104276.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-A01, full
            insert sequence
          Length = 1454

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/110 (86%), Gaps = 9/110 (8%)
 Strand = Plus / Minus

                                                                        
Query: 464  gctcttgtggttctgctcagctgtaatgctcttgtcctgttttccttctggcagatcact 523
            |||||| ||||||||||||||||| |||||||| ||||     |||| ||||||||||||
Sbjct: 1119 gctcttctggttctgctcagctgtgatgctcttatcct-----cctt-tggcagatcact 1066

                                                              
Query: 524  ttggcagcagctaaagcctcctccattgccctggcagcatccacctgcag 573
             ||||||||| ||||||||||   ||||||||||||||| ||||||||||
Sbjct: 1065 ctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgcag 1019



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Minus

                                                                        
Query: 298  tcttgtaggccctgaaagcgacgaacaccgttgcagcagctgcaacaacagcaagagtgg 357
            ||||||||  |||||||||||||||||||| ||||||||||||||||| | ||||||  |
Sbjct: 1288 tcttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcag 1229

                                                       
Query: 358  tgtaggtgtcagacctatcccaggtctcgaaccaggtgggcat 400
              |||||||||| | | ||||| ||||| |||||||| |||||
Sbjct: 1228 cataggtgtcagccgtttcccatgtctcaaaccaggttggcat 1186
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>dbj|AK071759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109C03, full
            insert sequence
          Length = 1611

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/110 (86%), Gaps = 9/110 (8%)
 Strand = Plus / Minus

                                                                        
Query: 464  gctcttgtggttctgctcagctgtaatgctcttgtcctgttttccttctggcagatcact 523
            |||||| ||||||||||||||||| |||||||| ||||     |||| ||||||||||||
Sbjct: 1118 gctcttctggttctgctcagctgtgatgctcttatcct-----cctt-tggcagatcact 1065

                                                              
Query: 524  ttggcagcagctaaagcctcctccattgccctggcagcatccacctgcag 573
             ||||||||| ||||||||||   ||||||||||||||| ||||||||||
Sbjct: 1064 ctggcagcaggtaaagcctcc---attgccctggcagcaaccacctgcag 1018



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Minus

                                                                        
Query: 298  tcttgtaggccctgaaagcgacgaacaccgttgcagcagctgcaacaacagcaagagtgg 357
            ||||||||  |||||||||||||||||||| ||||||||||||||||| | ||||||  |
Sbjct: 1287 tcttgtagatcctgaaagcgacgaacaccgatgcagcagctgcaacaataccaagagcag 1228

                                                       
Query: 358  tgtaggtgtcagacctatcccaggtctcgaaccaggtgggcat 400
              |||||||||| | | ||||| ||||| |||||||| |||||
Sbjct: 1227 cataggtgtcagccgtttcccatgtctcaaaccaggttggcat 1185
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>gb|AY111756.1| Zea mays CL26659_-2 mRNA sequence
          Length = 669

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 344 aacagcaagagtggtgtaggtgtcagacctatcccaggtctcgaaccaggtgggcatcgg 403
           |||||||||||  |  ||||||||||  || ||||||||||| |||||||||||||||||
Sbjct: 375 aacagcaagagcagcataggtgtcagctctctcccaggtctcaaaccaggtgggcatcgg 434

                    
Query: 404 gcaaatctt 412
           |||| ||||
Sbjct: 435 gcaagtctt 443
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>gb|BC003318.1| Mus musculus PRP40 pre-mRNA processing factor 40 homolog A (yeast),
           mRNA (cDNA clone IMAGE:3155888), containing frame-shift
           errors
          Length = 1181

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 329 tgcagcagctgcaacaacagca 350
           ||||||||||||||||||||||
Sbjct: 882 tgcagcagctgcaacaacagca 861
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>ref|NM_018785.1| Mus musculus PRP40 pre-mRNA processing factor 40 homolog A (yeast)
           (Prpf40a), mRNA
          Length = 3580

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 329 tgcagcagctgcaacaacagca 350
           ||||||||||||||||||||||
Sbjct: 855 tgcagcagctgcaacaacagca 834
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>dbj|AK087963.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430001J20
           product:formin binding protein 3, full insert sequence
          Length = 1056

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 329 tgcagcagctgcaacaacagca 350
           ||||||||||||||||||||||
Sbjct: 772 tgcagcagctgcaacaacagca 751
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>dbj|AB125135.1| Uncultured rumen bacterium mcrA gene for methyl-coenzyme M
           reductase subunit A, partial cds, clone:NILGS18
          Length = 722

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 329 tgcagcagctgcaacaacagca 350
           ||||||||||||||||||||||
Sbjct: 529 tgcagcagctgcaacaacagca 508
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>gb|AF135439.1|AF135439 Mus musculus formin binding protein 11 (FBP11) mRNA, complete cds
          Length = 3580

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 329 tgcagcagctgcaacaacagca 350
           ||||||||||||||||||||||
Sbjct: 855 tgcagcagctgcaacaacagca 834
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>emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chromosome 2, complete
              sequence
          Length = 183985

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 329    tgcagcagctgcaacaacagca 350
              ||||||||||||||||||||||
Sbjct: 141892 tgcagcagctgcaacaacagca 141913
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>ref|XM_322387.1| Neurospora crassa OR74A hypothetical protein (NCU00302.1) partial
            mRNA
          Length = 2910

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 331  cagcagctgcaacaacagcaa 351
            |||||||||||||||||||||
Sbjct: 1384 cagcagctgcaacaacagcaa 1404
to top
>ref|XM_952680.1| Neurospora crassa OR74A hypothetical protein (NCU00302.1) partial
            mRNA
          Length = 2910

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 331  cagcagctgcaacaacagcaa 351
            |||||||||||||||||||||
Sbjct: 1384 cagcagctgcaacaacagcaa 1404
to top
>ref|XM_781435.1| PREDICTED: Strongylocentrotus purpuratus similar to Myosin-15
           (Myosin XV) (Unconventional myosin-15) (LOC581439), mRNA
          Length = 5004

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 331 cagcagctgcaacaacagcaa 351
           |||||||||||||||||||||
Sbjct: 772 cagcagctgcaacaacagcaa 792
to top
>gb|AC158389.2| Mus musculus BAC clone RP24-476G13 from chromosome 12, complete
             sequence
          Length = 185533

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 281   caggcttcagttcatggtctt 301
             |||||||||||||||||||||
Sbjct: 13809 caggcttcagttcatggtctt 13829
to top
>ref|NM_001015810.1| Xenopus tropicalis MGC97602 protein (MGC97602), mRNA
          Length = 2085

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 231  gtagactctccttgatgcaca 251
            |||||||||||||||||||||
Sbjct: 1195 gtagactctccttgatgcaca 1175
to top
>emb|BX822017.1|CNS0A8BK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL92ZD06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1186

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 331 cagcagctgcaacaacagcaa 351
           |||||||||||||||||||||
Sbjct: 777 cagcagctgcaacaacagcaa 797
to top
>gb|AC159396.2| Physcomitrella patens clone JGIASYB-5E19, complete sequence
          Length = 40528

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 330   gcagcagctgcaacaacagca 350
             |||||||||||||||||||||
Sbjct: 12545 gcagcagctgcaacaacagca 12525
to top
>gb|AC006091.10|AC006091 Drosophila melanogaster, chromosome 3R, region 91F1-91F13, BAC clone
             BACR48G05, complete sequence
          Length = 174118

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 331   cagcagctgcaacaacagcaa 351
             |||||||||||||||||||||
Sbjct: 66854 cagcagctgcaacaacagcaa 66834
to top
>gb|BC090091.1| Xenopus tropicalis MGC97602 protein, mRNA (cDNA clone MGC:97602
            IMAGE:6978076), complete cds
          Length = 2125

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 231  gtagactctccttgatgcaca 251
            |||||||||||||||||||||
Sbjct: 1235 gtagactctccttgatgcaca 1215
to top
>emb|BX649345.16| Zebrafish DNA sequence from clone DKEY-161F11 in linkage group 11,
             complete sequence
          Length = 138432

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 208   ctatgcactagtatataactt 228
             |||||||||||||||||||||
Sbjct: 79790 ctatgcactagtatataactt 79770
to top
>gb|AE003725.2| Drosophila melanogaster chromosome 3R, section 63 of 118 of the
             complete sequence
          Length = 253323

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 331   cagcagctgcaacaacagcaa 351
             |||||||||||||||||||||
Sbjct: 24496 cagcagctgcaacaacagcaa 24476
to top
>dbj|AB090821.1| Anopheles gambiae retrotransposon R7Ag2 DNA, complete sequence
          Length = 6590

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 330  gcagcagctgcaacaacagca 350
            |||||||||||||||||||||
Sbjct: 1703 gcagcagctgcaacaacagca 1723
to top
>gb|AC147719.1| Gallus gallus BAC clone CH261-22J12 from chromosome unknown, complete
              sequence
          Length = 192198

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 454    ctgccttggggctcttgtggt 474
              |||||||||||||||||||||
Sbjct: 140749 ctgccttggggctcttgtggt 140769
to top
>emb|Z50097.1|DMRNAHDCP Drosophila melanogaster mRNA for headcase protein
          Length = 4650

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 330  gcagcagctgcaacaacagca 350
            |||||||||||||||||||||
Sbjct: 2185 gcagcagctgcaacaacagca 2205
to top
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       ttctttaaaacccaaatgtt 20
               ||||||||||||||||||||
Sbjct: 3549859 ttctttaaaacccaaatgtt 3549840
to top
>ref|NM_126244.2| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL)
            transcript variant AT2G01830.1 mRNA, complete cds
          Length = 3637

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2542 gcagcagctgcaacaacagc 2523
to top
>ref|NM_179594.1| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL)
            transcript variant AT2G01830.2 mRNA, complete cds
          Length = 3658

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2543 gcagcagctgcaacaacagc 2524
to top
>ref|NM_201667.1| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL)
            transcript variant AT2G01830.3 mRNA, complete cds
          Length = 3654

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2539 gcagcagctgcaacaacagc 2520
to top
>gb|AC147352.2| Xenopus tropicalis clone CH216-157J16, complete sequence
          Length = 141579

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   ctttctttgacactctctgc 457
             ||||||||||||||||||||
Sbjct: 61000 ctttctttgacactctctgc 60981
to top
>gb|AC160334.2| Mus musculus BAC clone RP23-37D14 from chromosome 9, complete sequence
          Length = 180527

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   gatgcacaaaacctgcattg 263
             ||||||||||||||||||||
Sbjct: 57762 gatgcacaaaacctgcattg 57781
to top
>gb|AC165072.13| Mus musculus chromosome 18, clone RP23-345E17, complete sequence
          Length = 223019

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 445    tgacactctctgccttgggg 464
              ||||||||||||||||||||
Sbjct: 199255 tgacactctctgccttgggg 199236
to top
>gb|AC122410.4| Mus musculus BAC clone RP24-142A1 from chromosome 6, complete sequence
          Length = 190744

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 275   gcttcacaggcttcagttcatggt 298
             |||||||||| |||||||||||||
Sbjct: 90819 gcttcacaggtttcagttcatggt 90842
to top
>ref|XM_814820.1| Trypanosoma cruzi strain CL Brener double-strand-break repair protein
            (Tc00.1047053506789.130) partial mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  gcagcagctgcaacaacagcaaga 353
            |||||||||||||||||| |||||
Sbjct: 1311 gcagcagctgcaacaacaacaaga 1334
to top
>emb|CR674499.2|CNS0FJEX Tetraodon nigroviridis full-length cDNA
          Length = 642

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 53  aacatcgtcatgtagaacaccagg 76
           |||||||||||| |||||||||||
Sbjct: 317 aacatcgtcatggagaacaccagg 340
to top
>emb|BX005072.20| Human DNA sequence from clone XXyac-59F3 on chromosome 10 Contains
            the 5' end of a novel gene, a novel gene (MGC35285) and a
            CpG island, complete sequence
          Length = 97407

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  tgcagcagctgcaacaacag 348
            ||||||||||||||||||||
Sbjct: 2183 tgcagcagctgcaacaacag 2202
to top
>emb|AL691522.4| Human DNA sequence from clone RP11-16I11 on chromosome 1, complete
             sequence
          Length = 56703

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     tttaaaacccaaatgtttca 23
             ||||||||||||||||||||
Sbjct: 54182 tttaaaacccaaatgtttca 54201
to top
>emb|AL450334.15| Human DNA sequence from clone RP11-556L1 on chromosome 10 Contains gene
             DKFZP566K0524, the gene for a novel protein similar to
             tyrosine phosphatase (MGC35285), the 3' end of a KIAA0187
             pseudogene, the 3' end of a novel gene, the gene for a
             novel protein similar to ARF GTPase-activating protein
             (MRIP2) and a CpG island, complete sequence
          Length = 171930

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   tgcagcagctgcaacaacag 348
             ||||||||||||||||||||
Sbjct: 21703 tgcagcagctgcaacaacag 21722
to top
>gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence
          Length = 270695

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 362    ggtgtcagacctatcccaggtctc 385
              |||||||||||| |||||||||||
Sbjct: 242717 ggtgtcagacctttcccaggtctc 242740
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       ttctttaaaacccaaatgtt 20
               ||||||||||||||||||||
Sbjct: 3575234 ttctttaaaacccaaatgtt 3575215
to top
>ref|XM_968841.1| PREDICTED: Tribolium castaneum similar to High mobility group protein
            DSP1 (Dorsal switch protein 1) (LOC662763), mRNA
          Length = 2682

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  gcagcagctgcaacaacagcaaga 353
            |||||||| |||||||||||||||
Sbjct: 1647 gcagcagcagcaacaacagcaaga 1670
to top
>emb|BX060025.1|CNS09IH9 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC40AH12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 916

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 407 aatcttcatgcgacccttgc 426
           ||||||||||||||||||||
Sbjct: 334 aatcttcatgcgacccttgc 353
to top
>emb|BX060024.1|CNS09IH8 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC40AH12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 794

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 aatcttcatgcgacccttgc 426
           ||||||||||||||||||||
Sbjct: 413 aatcttcatgcgacccttgc 394
to top
>ref|XM_795071.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC582160 (LOC582160), mRNA
          Length = 819

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 331 cagcagctgcaacaacagca 350
           ||||||||||||||||||||
Sbjct: 183 cagcagctgcaacaacagca 202
to top
>ref|XM_794797.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC576246 (LOC576246), mRNA
          Length = 819

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 331 cagcagctgcaacaacagca 350
           ||||||||||||||||||||
Sbjct: 183 cagcagctgcaacaacagca 202
to top
>emb|AJ278530.1|ATH278530 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol
            gene), splice variant 3
          Length = 3612

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2539 gcagcagctgcaacaacagc 2520
to top
>emb|AJ278529.1|ATH278529 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol
            gene), splice variant 2
          Length = 3503

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2430 gcagcagctgcaacaacagc 2411
to top
>emb|AJ278528.1|ATH278528 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol
            gene), splice variant 1
          Length = 3620

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2547 gcagcagctgcaacaacagc 2528
to top
>emb|BX284629.6| Mouse DNA sequence from clone RP23-227J8 on chromosome 11 Contains the 3'
              end of the Gabrg2 gene for gamma-aminobutyric acid (GABA-A)
              receptor, subunit gamma 2, part of a novel gene and a CpG
              island, complete sequence
          Length = 129433

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tttaaaacccaaatgtttca 23
              ||||||||||||||||||||
Sbjct: 103158 tttaaaacccaaatgtttca 103139
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 1       ttctttaaaacccaaatgtt 20
               ||||||||||||||||||||
Sbjct: 4063204 ttctttaaaacccaaatgtt 4063223
to top
>gb|AC121340.4| Homo sapiens X BAC RP13-928P6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 125285

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   ggtagactctccttgatgca 249
             ||||||||||||||||||||
Sbjct: 68411 ggtagactctccttgatgca 68430
to top
>gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 182960

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 327    gttgcagcagctgcaacaacagca 350
              ||||||||||| ||||||||||||
Sbjct: 169110 gttgcagcagcagcaacaacagca 169133
to top
>gb|AC010055.6| Drosophila melanogaster 3L BAC RP98-24H3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163098

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 327   gttgcagcagctgcaacaacagca 350
             ||||||||||| ||||||||||||
Sbjct: 52555 gttgcagcagcagcaacaacagca 52578
to top
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038
          Length = 1725576

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 525    tggcagcagctaaagcctcc 544
              ||||||||||||||||||||
Sbjct: 789122 tggcagcagctaaagcctcc 789141
to top
>ref|NM_141028.1| Drosophila melanogaster CG12977-RA (CG12977), mRNA
          Length = 930

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 327 gttgcagcagctgcaacaacagca 350
           ||||||||||| ||||||||||||
Sbjct: 372 gttgcagcagcagcaacaacagca 395
to top
>gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K3 map mi320, complete
             sequence
          Length = 73009

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   gcagcagctgcaacaacagc 349
             ||||||||||||||||||||
Sbjct: 10384 gcagcagctgcaacaacagc 10403
to top
>gb|AC002387.3| Arabidopsis thaliana chromosome 2 clone F4L23 map CIC02E07, complete
             sequence
          Length = 122928

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 591   tttgctttaggggattctttggcg 614
             |||||||||| |||||||||||||
Sbjct: 80902 tttgctttagtggattctttggcg 80879
to top
>ref|NM_134961.1| Drosophila melanogaster CG10019-RA (CG10019), mRNA
          Length = 3396

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 327  gttgcagcagctgcaacaacagca 350
            ||||||||||| ||||||||||||
Sbjct: 2721 gttgcagcagcagcaacaacagca 2744
to top
>gb|AC013284.9| Homo sapiens chromosome 10 clone RP11-13E1, complete sequence
          Length = 154259

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    tgcagcagctgcaacaacag 348
              ||||||||||||||||||||
Sbjct: 140070 tgcagcagctgcaacaacag 140051
to top
>gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, complete sequence
          Length = 171739

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 504   tttccttctggcagatcact 523
             ||||||||||||||||||||
Sbjct: 10020 tttccttctggcagatcact 10001
to top
>dbj|AK140656.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930072H01 product:hypothetical
           Histidine-rich region profile containing protein, full
           insert sequence
          Length = 2787

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 618 gattcttccccagtcacacc 637
           ||||||||||||||||||||
Sbjct: 347 gattcttccccagtcacacc 328
to top
>gb|AC026739.7| Homo sapiens chromosome 5 clone CTD-2580L4, complete sequence
          Length = 186308

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   tgcagcagctgcaacaacag 348
             ||||||||||||||||||||
Sbjct: 19032 tgcagcagctgcaacaacag 19051
to top
>gb|AC103362.7| Mus musculus chromosome 18, clone RP24-87N19, complete sequence
          Length = 170674

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aaaacccaaatgtttcagaa 26
              ||||||||||||||||||||
Sbjct: 101219 aaaacccaaatgtttcagaa 101238
to top
>gb|AC092240.1|AC092240 Drosophila melanogaster, chromosome 2L, region 24E-24F, BAC clone
             BACR06H02, complete sequence
          Length = 187707

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 327   gttgcagcagctgcaacaacagca 350
             ||||||||||| ||||||||||||
Sbjct: 44748 gttgcagcagcagcaacaacagca 44771
to top
>emb|AL954370.3| Mouse DNA sequence from clone RP23-180P4 on chromosome 2, complete
             sequence
          Length = 61741

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 618   gattcttccccagtcacacc 637
             ||||||||||||||||||||
Sbjct: 33851 gattcttccccagtcacacc 33870
to top
>gb|AC140846.3| Homo sapiens X PAC RP1-93D11 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 152761

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    ggtagactctccttgatgca 249
              ||||||||||||||||||||
Sbjct: 108530 ggtagactctccttgatgca 108549
to top
>gb|AC154682.2| Mus musculus BAC clone RP24-315N18 from chromosome 14, complete sequence
          Length = 171851

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 362    ggtgtcagacctatcccaggtctc 385
              |||||||||||| |||||||||||
Sbjct: 123807 ggtgtcagacctttcccaggtctc 123784
to top
>gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, complete sequence
          Length = 156789

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 504   tttccttctggcagatcact 523
             ||||||||||||||||||||
Sbjct: 21571 tttccttctggcagatcact 21590
to top
>gb|BT024351.1| Drosophila melanogaster IP09244 full insert cDNA
          Length = 1307

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 327 gttgcagcagctgcaacaacagca 350
           ||||||||||| ||||||||||||
Sbjct: 528 gttgcagcagcagcaacaacagca 551
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 1       ttctttaaaacccaaatgtt 20
               ||||||||||||||||||||
Sbjct: 4222806 ttctttaaaacccaaatgtt 4222825
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>ref|XM_309758.2| Anopheles gambiae str. PEST ENSANGP00000012428
           (ENSANGG00000009939), mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 aatcttcatgcgacccttgc 426
           ||||||||||||||||||||
Sbjct: 544 aatcttcatgcgacccttgc 525
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>emb|CT009542.22| Pig DNA sequence from clone CH242-272H8 on chromosome 7, complete
             sequence
          Length = 177899

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    aacaccagggccatagcctt 87
             ||||||||||||||||||||
Sbjct: 68355 aacaccagggccatagcctt 68336
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>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes
          Length = 372438

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      ttctttaaaacccaaatgtt 20
              ||||||||||||||||||||
Sbjct: 357949 ttctttaaaacccaaatgtt 357930
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>gb|AC174449.2| Mus musculus BAC clone RP23-338O19 from chromosome 6, complete sequence
          Length = 217169

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 275    gcttcacaggcttcagttcatggt 298
              |||||||||| |||||||||||||
Sbjct: 212431 gcttcacaggtttcagttcatggt 212454
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>gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74 of 83 of the complete
              sequence
          Length = 313157

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 327    gttgcagcagctgcaacaacagca 350
              ||||||||||| ||||||||||||
Sbjct: 232822 gttgcagcagcagcaacaacagca 232799
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>gb|AE003578.3| Drosophila melanogaster chromosome 2L, section 13 of 83 of the complete
             sequence
          Length = 295211

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 327   gttgcagcagctgcaacaacagca 350
             ||||||||||| ||||||||||||
Sbjct: 14498 gttgcagcagcagcaacaacagca 14521
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>gb|AC101682.8| Mus musculus chromosome 18, clone RP23-183C23, complete sequence
          Length = 227840

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      aaaacccaaatgtttcagaa 26
              ||||||||||||||||||||
Sbjct: 206335 aaaacccaaatgtttcagaa 206316
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>gb|DQ232601.1| Receiver Vector p415-CYC1-CRE1a-TR-SSRE-GFP, complete sequence
          Length = 11482

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2896 gcagcagctgcaacaacagc 2915
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>gb|DQ232600.1| Receiver Vector p415-CYC1-CRE1a-SSRE-GFP, complete sequence
          Length = 11442

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2856 gcagcagctgcaacaacagc 2875
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>gb|AC153945.5| Mus musculus 10 BAC RP24-501G17 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 179734

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    aacttcaaaacctaggagtt 136
              ||||||||||||||||||||
Sbjct: 117154 aacttcaaaacctaggagtt 117135
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>gb|AC005149.1|AC005149 Drosophila melanogaster DNA sequence (P1s DS03364 (D237) and DS02911
             (D145)), complete sequence
          Length = 98942

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 327   gttgcagcagctgcaacaacagca 350
             ||||||||||| ||||||||||||
Sbjct: 55474 gttgcagcagcagcaacaacagca 55497
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>gb|AC145913.3| Gallus gallus BAC clone CH261-50N9 from chromosome unknown, complete
             sequence
          Length = 182816

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 504   tttccttctggcagatcact 523
             ||||||||||||||||||||
Sbjct: 23316 tttccttctggcagatcact 23297
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       ttctttaaaacccaaatgtt 20
               ||||||||||||||||||||
Sbjct: 4363687 ttctttaaaacccaaatgtt 4363668
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>emb|AL929335.9| Zebrafish DNA sequence from clone CH211-9D9, complete sequence
          Length = 173236

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 535    taaagcctcctccattgccc 554
              ||||||||||||||||||||
Sbjct: 152055 taaagcctcctccattgccc 152036
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       ttctttaaaacccaaatgtt 20
               ||||||||||||||||||||
Sbjct: 4296465 ttctttaaaacccaaatgtt 4296446
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       ttctttaaaacccaaatgtt 20
               ||||||||||||||||||||
Sbjct: 3327040 ttctttaaaacccaaatgtt 3327021
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       ttctttaaaacccaaatgtt 20
               ||||||||||||||||||||
Sbjct: 3426701 ttctttaaaacccaaatgtt 3426682
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       ttctttaaaacccaaatgtt 20
               ||||||||||||||||||||
Sbjct: 3857829 ttctttaaaacccaaatgtt 3857810
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>dbj|AB046871.1| Arabidopsis thaliana AHK4 mRNA for histidine kinase, complete cds
          Length = 3243

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2477 gcagcagctgcaacaacagc 2458
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>dbj|AB049935.1| Arabidopsis thaliana mRNA for cytokinin receptor CRE1b, complete cds
          Length = 3694

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2545 gcagcagctgcaacaacagc 2526
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>dbj|AB049934.1| Arabidopsis thaliana mRNA for cytokinin receptor CRE1a, complete cds
          Length = 3649

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  gcagcagctgcaacaacagc 349
            ||||||||||||||||||||
Sbjct: 2508 gcagcagctgcaacaacagc 2489
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>dbj|D84362.1|ECOGNTR Escherichia coli DNA for repressor, low affinity gluconate permease,
            thermoresistant gluconokinase
          Length = 4458

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    ttctttaaaacccaaatgtt 20
            ||||||||||||||||||||
Sbjct: 2009 ttctttaaaacccaaatgtt 2028


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,130,733
Number of Sequences: 3902068
Number of extensions: 6130733
Number of successful extensions: 129820
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129375
Number of HSP's gapped (non-prelim): 438
length of query: 661
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 638
effective length of database: 17,143,297,704
effective search space: 10937423935152
effective search space used: 10937423935152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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