>ALF4_ARATH (Q84VX3) Aberrant root formation protein 4|
          Length = 626

 Score = 65.5 bits (158), Expect = 9e-11
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
 Frame = -2

Query: 533 GGPPCLRDHSEEVXXXXXXXXXXXXXXXX--------XXXSATMFRDKTIQAVYADWLIP 378
           GGPP L D S+ +                            + +   K ++  Y +WL+P
Sbjct: 517 GGPPLLPDQSDAILAALNLYRFALLFESRECEAGKERSKVGSDILSKKNLEKAYKEWLLP 576

Query: 377 LRSIVSGTQSE-LEKDGGEEEN-QMVCLLNPVQLVLHRCIELVEEKMK 240
           LR++VS + +E L++D G+E +   V LLNP++LVL+RCIELVEEK+K
Sbjct: 577 LRTLVSCSIAENLKEDHGQESSLDDVGLLNPIELVLYRCIELVEEKLK 624

>SEH1_YEAST (P53011) Nucleoporin SEH1 (Nuclear pore protein SEH1) (SEC13|
           homolog 1)
          Length = 349

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 451 QEDPDQQQCSGTKQYKPCT 395
           +EDPDQ++CSG +  K CT
Sbjct: 85  EEDPDQEECSGRRWNKLCT 103

>ATM_YEAST (P38110) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase TEL1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2787

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
 Frame = -2

Query: 425 FRDKTIQAVYADWLIPLRSIVSGTQSELEKDGGEEENQMVCLLNP----VQLVLHRCIEL 258
           F+ KT++ + A  ++P   +  G++S L+         +  L+      ++ ++H+ I L
Sbjct: 102 FKVKTLKLLLA--VVPELMVKDGSKSLLDAVSVHLSFALDALIKSDPFKLKFMIHQWISL 159

Query: 257 VEEKMKGL*WSY-SAQRSVALARKFETSFISILIEHHAVHTCGI 129
           V++      W Y  +Q  +++  K  T+FISIL+   A+ T GI
Sbjct: 160 VDKI-----WEYFQSQMKLSMVDKTLTNFISILLNLLALDTVGI 198

>MTF2_PONPY (Q5R7T9) Metal-response element-binding transcription factor 2|
           (Metal-regulatory transcription factor 2)
          Length = 593

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = -1

Query: 135 WYIAVL-CCKCNQWSSSFC 82
           WY+ +L CCKC QW    C
Sbjct: 212 WYLKMLQCCKCKQWFHEAC 230

>MTF2_MOUSE (Q02395) Metal-response element-binding transcription factor 2|
           (Zinc-regulated factor 1) (ZiRF1) (Metal-response
           element DNA-binding protein M96) (Metal-regulatory
           transcription factor 2) (PCL2)
          Length = 593

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = -1

Query: 135 WYIAVL-CCKCNQWSSSFC 82
           WY+ +L CCKC QW    C
Sbjct: 212 WYLKMLQCCKCKQWFHEAC 230

>MTF2_HUMAN (Q9Y483) Metal-response element-binding transcription factor 2|
           (Metal-response element DNA-binding protein M96)
           (Metal-regulatory transcription factor 2) (PCL2)
          Length = 593

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = -1

Query: 135 WYIAVL-CCKCNQWSSSFC 82
           WY+ +L CCKC QW    C
Sbjct: 212 WYLKMLQCCKCKQWFHEAC 230

>BFR2_YEAST (Q06631) Protein BFR2 (Brefeldin A resistance protein 2)|
          Length = 534

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 465 SDNRFKRIQISNNVPGQNNTSRVRRLADPTKINR 364
           S N+FK I +  +V  +N  S + RL   TK+NR
Sbjct: 311 SSNKFKAINLPADVQVENQLSDMSRLMKRTKLNR 344


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,905,202
Number of Sequences: 219361
Number of extensions: 1367315
Number of successful extensions: 3417
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3416
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)