ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21k01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK058557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 2e-96
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
3dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
4ref|NM_102381.2| Arabidopsis thaliana catalytic AT1G26160 mRNA, ... 72 3e-09
5gb|AY113965.1| Arabidopsis thaliana unknown protein (At1g26160) ... 72 3e-09
6gb|AY056247.1| Arabidopsis thaliana unknown protein (At1g26160) ... 72 3e-09
7gb|AY087714.1| Arabidopsis thaliana clone 37861 mRNA, complete s... 72 3e-09
8ref|NM_201793.1| Arabidopsis thaliana catalytic AT2G23820 transc... 64 6e-07
9gb|BT015048.1| Arabidopsis thaliana At2g23820 gene, complete cds 64 6e-07
10emb|BX818491.1|CNS0ACOV Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
11gb|BT020542.1| Arabidopsis thaliana At2g23820 gene, complete cds 64 6e-07
12ref|NM_127945.3| Arabidopsis thaliana catalytic AT2G23820 transc... 54 6e-04
13emb|BX821863.1|CNS0AA3K Arabidopsis thaliana Full-length cDNA Co... 54 6e-04
14gb|AC159656.11| Mus musculus 6 BAC RP24-85F2 (Roswell Park Cance... 44 0.58
15gb|AC079829.6|AC079829 Arabidopsis thaliana chromosome 1 BAC F28... 44 0.58
16ref|NM_192269.1| Oryza sativa (japonica cultivar-group), predic... 42 2.3
17gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, co... 42 2.3
18gb|AC004874.1| Homo sapiens PAC clone RP4-744D13 from 7, complet... 42 2.3
19gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosom... 42 2.3
20gb|AC079145.4| Homo sapiens BAC clone RP11-42N12 from 2, complet... 42 2.3
21gb|BC069103.1| Homo sapiens lactalbumin, alpha-, mRNA (cDNA clon... 40 9.0
22ref|XM_949725.1| Theileria annulata strain Ankara hypothetical p... 40 9.0
23emb|AL445486.10| Human DNA sequence from clone RP11-139K1 on chr... 40 9.0
24ref|NM_002289.2| Homo sapiens lactalbumin, alpha- (LALBA), mRNA 40 9.0
25gb|AC165145.2| Mus musculus BAC clone RP24-385A10 from chromosom... 40 9.0
26emb|X05153.1|HSLACTG Human alpha-lactalbumin gene 40 9.0
27gb|AC089987.26| Homo sapiens 12q BAC RP11-722P11 (Roswell Park C... 40 9.0
28gb|AC079951.35| Homo sapiens 12q BAC RP11-346L11 (Roswell Park C... 40 9.0
29gb|AC022905.7| Homo sapiens chromosome 8, clone RP11-656G20, com... 40 9.0
30emb|CR542017.1| Homo sapiens full open reading frame cDNA clone ... 40 9.0
31emb|CR541987.1| Homo sapiens full open reading frame cDNA clone ... 40 9.0
32emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14,... 40 9.0
33gb|AC157956.2| Pan troglodytes BAC clone CH251-379N13 from chrom... 40 9.0
34gb|AC011003.7|AC011003 Homo sapiens chromosome 8 clone RP11-86O1... 40 9.0
35gb|AY893973.1| Synthetic construct Homo sapiens clone FLH131260.... 40 9.0
36gb|AY893538.1| Synthetic construct Homo sapiens clone FLH131258.... 40 9.0
37gb|BC112316.1| Homo sapiens lactalbumin, alpha-, mRNA (cDNA clon... 40 9.0
38gb|BC112318.1| Homo sapiens lactalbumin, alpha-, mRNA (cDNA clon... 40 9.0
39dbj|AB049976.1| Homo sapiens genes for alpha-lactalbumin, olfact... 40 9.0
40gb|AC005701.1|AC005701 Homo sapiens chromosome 17, clone hRPK.62... 40 9.0
41gb|J00270.1|HUMLACTAL Homo sapiens alpha-lactalbumin (LALBA) mRN... 40 9.0 
>dbj|AK058557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D05, full
           insert sequence
          Length = 1064

 Score =  361 bits (182), Expect = 2e-96
 Identities = 326/374 (87%)
 Strand = Plus / Minus

                                                                       
Query: 286 tttcactttcttctcgatgcgacctctgctgcccatgcttttccgacgtctgtttggaat 345
           |||||||||||||| ||||| ||||||||||||||||||||||| |||||||| || |||
Sbjct: 750 tttcactttcttcttgatgctacctctgctgcccatgcttttccaacgtctgtctgaaat 691

                                                                       
Query: 346 ttccctgccgtcgattggaagaactcttctaggtcatgcccttgctccttttcgtattcc 405
           |||||||| || || ||||| ||||||||||||||  |||||||||||||||| || |||
Sbjct: 690 ttccctgctgttgactggaaaaactcttctaggtccagcccttgctccttttcatactcc 631

                                                                       
Query: 406 agtgcttgaagtatcatctcaaccttgtcaaaatctttgacgaccttcgcttccaaagtg 465
           | ||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 630 aatgcttgaagaatcatctcaaccttgtcaaaatctttcacaacctttgcttccaaagtg 571

                                                                       
Query: 466 gcattgttctcatactccatccaaagctcacgaacttcgtcggctcttgaacctccacca 525
           ||||| | |||||| ||||||||||| ||||| | ||| || ||||| | ||| ||||| 
Sbjct: 570 gcattctgctcatattccatccaaagttcacggatttcttcagctctcggaccaccaccg 511

                                                                       
Query: 526 agcaatgtgcacatatggtccaaagcttccttctctctacggctcttctcttccttgggc 585
           |||||  |||||||||||||||| ||||| | |||||| |||||||| |||||||| |||
Sbjct: 510 agcaaactgcacatatggtccaatgcttcttgctctctgcggctcttttcttccttcggc 451

                                                                       
Query: 586 acaccatcaacaggcgtgatatcgccaacaatagcttcggctatgtcatgcacaatcgcc 645
           || |||||   ||| |||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 450 acgccatctgaaggggtgatatcaccaacaatagcttcggctatgtcgtgcacgatcgcc 391

                         
Query: 646 attttcacacacct 659
           || || ||||||||
Sbjct: 390 atcttgacacacct 377
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                           
Query: 286     tttcactttcttctcgatgcgacctctgctgcccatgcttttccgacgtctgtttggaat 345
               |||||||||||||| ||||| ||||||||||||||||||||||| |||||||| || |||
Sbjct: 4387618 tttcactttcttcttgatgctacctctgctgcccatgcttttccaacgtctgtctgaaat 4387559

                       
Query: 346     ttccctgc 353
               ||||||||
Sbjct: 4387558 ttccctgc 4387551



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                           
Query: 427     accttgtcaaaatctttgacgaccttcgcttccaaagtggcattgttctcatactccatc 486
               ||||||||||||||||| || ||||| ||||||||||||||||| | |||||| ||||||
Sbjct: 4386347 accttgtcaaaatctttcacaacctttgcttccaaagtggcattctgctcatattccatc 4386288

                          
Query: 487     caaagctcacg 497
               ||||| |||||
Sbjct: 4386287 caaagttcacg 4386277



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                           
Query: 520     ccaccaagcaatgtgcacatatggtccaaagcttccttctctctacggctcttctcttcc 579
               ||||| |||||  |||||||||||||||| ||||| | |||||| |||||||| ||||||
Sbjct: 4385347 ccaccgagcaaactgcacatatggtccaatgcttcttgctctctgcggctcttttcttcc 4385288

                                                         
Query: 580     ttgggcacaccatcaacaggcgtgatatcgccaacaatagct 621
               || ||||| |||||   ||| |||||||| ||||||||||||
Sbjct: 4385287 ttcggcacgccatctgaaggggtgatatcaccaacaatagct 4385246



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                       
Query: 620     cttcggctatgtcatgcacaatcgccattttcacacacct 659
               ||||||||||||| ||||| |||||||| || ||||||||
Sbjct: 4384778 cttcggctatgtcgtgcacgatcgccatcttgacacacct 4384739



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                      
Query: 392     ccttttcgtattccagtgcttgaagtatcatctcaacct 430
               ||||||| || |||| ||||||||| |||||||||||||
Sbjct: 4386946 ccttttcatactccaatgcttgaagaatcatctcaacct 4386908



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 361     tggaagaactcttctaggtcatgcccttgctc 392
               ||||| ||||||||||||||  ||||||||||
Sbjct: 4387260 tggaaaaactcttctaggtccagcccttgctc 4387229
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>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544B02
          Length = 156339

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                         
Query: 286   tttcactttcttctcgatgcgacctctgctgcccatgcttttccgacgtctgtttggaat 345
             |||||||||||||| ||||| ||||||||||||||||||||||| |||||||| || |||
Sbjct: 71182 tttcactttcttcttgatgctacctctgctgcccatgcttttccaacgtctgtctgaaat 71123

                     
Query: 346   ttccctgc 353
             ||||||||
Sbjct: 71122 ttccctgc 71115



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                         
Query: 427   accttgtcaaaatctttgacgaccttcgcttccaaagtggcattgttctcatactccatc 486
             ||||||||||||||||| || ||||| ||||||||||||||||| | |||||| ||||||
Sbjct: 69911 accttgtcaaaatctttcacaacctttgcttccaaagtggcattctgctcatattccatc 69852

                        
Query: 487   caaagctcacg 497
             ||||| |||||
Sbjct: 69851 caaagttcacg 69841



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                         
Query: 520   ccaccaagcaatgtgcacatatggtccaaagcttccttctctctacggctcttctcttcc 579
             ||||| |||||  |||||||||||||||| ||||| | |||||| |||||||| ||||||
Sbjct: 68911 ccaccgagcaaactgcacatatggtccaatgcttcttgctctctgcggctcttttcttcc 68852

                                                       
Query: 580   ttgggcacaccatcaacaggcgtgatatcgccaacaatagct 621
             || ||||| |||||   ||| |||||||| ||||||||||||
Sbjct: 68851 ttcggcacgccatctgaaggggtgatatcaccaacaatagct 68810



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 620   cttcggctatgtcatgcacaatcgccattttcacacacct 659
             ||||||||||||| ||||| |||||||| || ||||||||
Sbjct: 68342 cttcggctatgtcgtgcacgatcgccatcttgacacacct 68303



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 392   ccttttcgtattccagtgcttgaagtatcatctcaacct 430
             ||||||| || |||| ||||||||| |||||||||||||
Sbjct: 70510 ccttttcatactccaatgcttgaagaatcatctcaacct 70472



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 361   tggaagaactcttctaggtcatgcccttgctc 392
             ||||| ||||||||||||||  ||||||||||
Sbjct: 70824 tggaaaaactcttctaggtccagcccttgctc 70793
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>ref|NM_102381.2| Arabidopsis thaliana catalytic AT1G26160 mRNA, complete cds
          Length = 1154

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 568 ctcttctcttccttgggcacaccatcaacaggcgtgatatcgccaacaatagcttcggct 627
           ||||| |||||||| ||||||||||||   || || ||||| |||||||||||||| || 
Sbjct: 507 ctcttttcttccttaggcacaccatcagatggggtaatatctccaacaatagcttcagcg 448

                                           
Query: 628 atgtcatgcacaatcgccattttcacacacct 659
           || ||||||||||| |||||||| | ||||||
Sbjct: 447 atatcatgcacaattgccatttttatacacct 416



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 418 atcatctcaaccttgtcaaaatctttgacgaccttcgcttccaaagtggcattgttctca 477
           |||||||||||||| ||||| ||||| || |  || ||||| ||||  ||||||||||||
Sbjct: 657 atcatctcaaccttatcaaagtcttttacaatatttgcttctaaagaagcattgttctca 598

                         
Query: 478 tactccatccaaag 491
           ||||||| ||||||
Sbjct: 597 tactccagccaaag 584
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>gb|AY113965.1| Arabidopsis thaliana unknown protein (At1g26160) mRNA, complete cds
          Length = 808

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 568 ctcttctcttccttgggcacaccatcaacaggcgtgatatcgccaacaatagcttcggct 627
           ||||| |||||||| ||||||||||||   || || ||||| |||||||||||||| || 
Sbjct: 473 ctcttttcttccttaggcacaccatcagatggggtaatatctccaacaatagcttcagcg 414

                                           
Query: 628 atgtcatgcacaatcgccattttcacacacct 659
           || ||||||||||| |||||||| | ||||||
Sbjct: 413 atatcatgcacaattgccatttttatacacct 382



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 418 atcatctcaaccttgtcaaaatctttgacgaccttcgcttccaaagtggcattgttctca 477
           |||||||||||||| ||||| ||||| || |  || ||||| ||||  ||||||||||||
Sbjct: 623 atcatctcaaccttatcaaagtcttttacaatatttgcttctaaagaagcattgttctca 564

                         
Query: 478 tactccatccaaag 491
           ||||||| ||||||
Sbjct: 563 tactccagccaaag 550
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>gb|AY056247.1| Arabidopsis thaliana unknown protein (At1g26160) mRNA, complete cds
          Length = 1171

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 568 ctcttctcttccttgggcacaccatcaacaggcgtgatatcgccaacaatagcttcggct 627
           ||||| |||||||| ||||||||||||   || || ||||| |||||||||||||| || 
Sbjct: 507 ctcttttcttccttaggcacaccatcagatggggtaatatctccaacaatagcttcagcg 448

                                           
Query: 628 atgtcatgcacaatcgccattttcacacacct 659
           || ||||||||||| |||||||| | ||||||
Sbjct: 447 atatcatgcacaattgccatttttatacacct 416



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 418 atcatctcaaccttgtcaaaatctttgacgaccttcgcttccaaagtggcattgttctca 477
           |||||||||||||| ||||| ||||| || |  || ||||| ||||  ||||||||||||
Sbjct: 657 atcatctcaaccttatcaaagtcttttacaatatttgcttctaaagaagcattgttctca 598

                         
Query: 478 tactccatccaaag 491
           ||||||| ||||||
Sbjct: 597 tactccagccaaag 584
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>gb|AY087714.1| Arabidopsis thaliana clone 37861 mRNA, complete sequence
          Length = 1157

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 568 ctcttctcttccttgggcacaccatcaacaggcgtgatatcgccaacaatagcttcggct 627
           ||||| |||||||| ||||||||||||   || || ||||| |||||||||||||| || 
Sbjct: 519 ctcttttcttccttaggcacaccatcagatggggtaatatctccaacaatagcttcagcg 460

                                           
Query: 628 atgtcatgcacaatcgccattttcacacacct 659
           || ||||||||||| |||||||| | ||||||
Sbjct: 459 atatcatgcacaattgccatttttatacacct 428



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 418 atcatctcaaccttgtcaaaatctttgacgaccttcgcttccaaagtggcattgttctca 477
           |||||||||||||| ||||| ||||| || |  || ||||| ||||  ||||||||||||
Sbjct: 669 atcatctcaaccttatcaaagtcttttacaatatttgcttctaaagaagcattgttctca 610

                         
Query: 478 tactccatccaaag 491
           ||||||| ||||||
Sbjct: 609 tactccagccaaag 596
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>ref|NM_201793.1| Arabidopsis thaliana catalytic AT2G23820 transcript variant
           AT2G23820.2 mRNA, complete cds
          Length = 1020

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                       
Query: 340 tggaatttccctgccgtcgattggaagaactcttctaggtcatgcccttgctccttttcg 399
           ||||| |||||||| || |||||||| ||||||||||| || | |||||| || | ||| 
Sbjct: 732 tggaacttccctgctgttgattggaaaaactcttctagatctttcccttgatcttgttca 673

                                                       
Query: 400 tattccagtgcttgaagtatcatctcaaccttgtcaaaatcttt 443
           |||||||  ||||| ||||||| |||||| || || ||||||||
Sbjct: 672 tattccaaagcttgtagtatcagctcaactttatcgaaatcttt 629



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 613 acaatagcttcggctatgtcatgcacaatcgccattttca 652
           ||||| ||||| || || ||||| ||||||||||||||||
Sbjct: 459 acaatggcttctgcaatatcatgaacaatcgccattttca 420
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>gb|BT015048.1| Arabidopsis thaliana At2g23820 gene, complete cds
          Length = 839

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                       
Query: 340 tggaatttccctgccgtcgattggaagaactcttctaggtcatgcccttgctccttttcg 399
           ||||| |||||||| || |||||||| ||||||||||| || | |||||| || | ||| 
Sbjct: 718 tggaacttccctgctgttgattggaaaaactcttctagatctttcccttgatcttgttca 659

                                                       
Query: 400 tattccagtgcttgaagtatcatctcaaccttgtcaaaatcttt 443
           |||||||  ||||| ||||||| |||||| || || ||||||||
Sbjct: 658 tattccaaagcttgtagtatcagctcaactttatcgaaatcttt 615



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 613 acaatagcttcggctatgtcatgcacaatcgccattttca 652
           ||||| ||||| || || ||||| ||||||||||||||||
Sbjct: 445 acaatggcttctgcaatatcatgaacaatcgccattttca 406
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>emb|BX818491.1|CNS0ACOV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL82ZA02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1087

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                       
Query: 568 ctcttctcttccttgggcacaccatcaacaggcgtgatatcgccaacaatagcttcggct 627
           ||||| |||||||| ||||||||||||   || || || || |||||||||||||| || 
Sbjct: 486 ctcttttcttccttaggcacaccatcagatggggtaatctctccaacaatagcttcagcg 427

                                           
Query: 628 atgtcatgcacaatcgccattttcacacacct 659
           || ||||||||||| |||||||| | ||||||
Sbjct: 426 atatcatgcacaattgccatttttatacacct 395



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 418 atcatctcaaccttgtcaaaatctttgacgaccttcgcttccaaagtggcattgttctca 477
           |||||||||||||| ||||| ||||| || |  || ||||| ||||  ||||||||||||
Sbjct: 636 atcatctcaaccttatcaaagtcttttacaatatttgcttctaaagaagcattgttctca 577

                         
Query: 478 tactccatccaaag 491
           ||||||| ||||||
Sbjct: 576 tactccagccaaag 563
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>gb|BT020542.1| Arabidopsis thaliana At2g23820 gene, complete cds
          Length = 774

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                       
Query: 340 tggaatttccctgccgtcgattggaagaactcttctaggtcatgcccttgctccttttcg 399
           ||||| |||||||| || |||||||| ||||||||||| || | |||||| || | ||| 
Sbjct: 713 tggaacttccctgctgttgattggaaaaactcttctagatctttcccttgatcttgttca 654

                                                       
Query: 400 tattccagtgcttgaagtatcatctcaaccttgtcaaaatcttt 443
           |||||||  ||||| ||||||| |||||| || || ||||||||
Sbjct: 653 tattccaaagcttgtagtatcagctcaactttatcgaaatcttt 610



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 613 acaatagcttcggctatgtcatgcacaatcgccattttca 652
           ||||| ||||| || || ||||| ||||||||||||||||
Sbjct: 440 acaatggcttctgcaatatcatgaacaatcgccattttca 401
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>ref|NM_127945.3| Arabidopsis thaliana catalytic AT2G23820 transcript variant
           AT2G23820.1 mRNA, complete cds
          Length = 1104

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                       
Query: 349 cctgccgtcgattggaagaactcttctaggtcatgcccttgctccttttcgtattccagt 408
           ||||| || |||||||| ||||||||||| || | |||||| || | ||| |||||||  
Sbjct: 723 cctgctgttgattggaaaaactcttctagatctttcccttgatcttgttcatattccaaa 664

                                              
Query: 409 gcttgaagtatcatctcaaccttgtcaaaatcttt 443
           ||||| ||||||| |||||| || || ||||||||
Sbjct: 663 gcttgtagtatcagctcaactttatcgaaatcttt 629



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 613 acaatagcttcggctatgtcatgcacaatcgccattttca 652
           ||||| ||||| || || ||||| ||||||||||||||||
Sbjct: 459 acaatggcttctgcaatatcatgaacaatcgccattttca 420
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>emb|BX821863.1|CNS0AA3K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL80ZA05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 986

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                       
Query: 349 cctgccgtcgattggaagaactcttctaggtcatgcccttgctccttttcgtattccagt 408
           ||||| || |||||||| ||||||||||| || | |||||| || | ||| |||||||  
Sbjct: 723 cctgctgttgattggaaaaactcttctagatctttcccttgatcttgttcatattccaaa 664

                                              
Query: 409 gcttgaagtatcatctcaaccttgtcaaaatcttt 443
           ||||| ||||||| |||||| || || ||||||||
Sbjct: 663 gcttgtagtatcagctcaactttatcgaaatcttt 629
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>gb|AC159656.11| Mus musculus 6 BAC RP24-85F2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 205702

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 278   tcagttgttttcactttcttct 299
             ||||||||||||||||||||||
Sbjct: 56689 tcagttgttttcactttcttct 56668
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>gb|AC079829.6|AC079829 Arabidopsis thaliana chromosome 1 BAC F28B23 genomic sequence, complete
             sequence
          Length = 96699

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 466   gcattgttctcatactccatccaaag 491
             ||||||||||||||||||| ||||||
Sbjct: 72455 gcattgttctcatactccagccaaag 72430



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 568   ctcttctcttccttgggcacaccatcaacaggcgtgatatcgccaacaatagct 621
             ||||| |||||||| ||||||||||||   || || ||||| ||||||||||||
Sbjct: 72272 ctcttttcttccttaggcacaccatcagatggggtaatatctccaacaatagct 72219
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>ref|NM_192269.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1386

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 610 ccaacaatagcttcggctatgtcatgcac 638
           |||||||||||||| || |||||||||||
Sbjct: 701 ccaacaatagcttcagcaatgtcatgcac 673



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 400  tattccagtgcttgaagtatcatctcaacctt 431
            ||||| ||||||||||||||||| || |||||
Sbjct: 1253 tattctagtgcttgaagtatcatttccacctt 1222
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>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence
          Length = 197242

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    gaactacaagtaaaaaagacc 112
             |||||||||||||||||||||
Sbjct: 64222 gaactacaagtaaaaaagacc 64202
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>gb|AC004874.1| Homo sapiens PAC clone RP4-744D13 from 7, complete sequence
          Length = 95983

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 283   tgttttcactttcttctcgat 303
             |||||||||||||||||||||
Sbjct: 12964 tgttttcactttcttctcgat 12984
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>gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosome 13, complete sequence
          Length = 199388

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 568    ctcttctcttccttgggcaca 588
              |||||||||||||||||||||
Sbjct: 107777 ctcttctcttccttgggcaca 107757
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>gb|AC079145.4| Homo sapiens BAC clone RP11-42N12 from 2, complete sequence
          Length = 137870

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   taagaaaggccctggagtgaa 201
             |||||||||||||||||||||
Sbjct: 74905 taagaaaggccctggagtgaa 74925
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>gb|BC069103.1| Homo sapiens lactalbumin, alpha-, mRNA (cDNA clone MGC:95379
           IMAGE:7216918), complete cds
          Length = 726

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 ctggagtgaaacatggtacagatc 215
           |||| |||||||||||||||||||
Sbjct: 184 ctggtgtgaaacatggtacagatc 161
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>ref|XM_949725.1| Theileria annulata strain Ankara hypothetical protein (TA04915)
            partial mRNA
          Length = 1947

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 413  gaagtatcatctcaaccttgtcaa 436
            ||||||||||||||| ||||||||
Sbjct: 1267 gaagtatcatctcaatcttgtcaa 1244
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>emb|AL445486.10| Human DNA sequence from clone RP11-139K1 on chromosome 10 Contains part
             of the TCF7L2 gene for transcription factor 7-like 2
             (T-cell specific, HMG-box) and a ribosomal protein S15
             (RPS15) pseudogene, complete sequence
          Length = 101839

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 543   gtccaaagcttccttctctc 562
             ||||||||||||||||||||
Sbjct: 72680 gtccaaagcttccttctctc 72699
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>ref|NM_002289.2| Homo sapiens lactalbumin, alpha- (LALBA), mRNA
          Length = 742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 ctggagtgaaacatggtacagatc 215
           |||| |||||||||||||||||||
Sbjct: 184 ctggtgtgaaacatggtacagatc 161
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>gb|AC165145.2| Mus musculus BAC clone RP24-385A10 from chromosome 13, complete
             sequence
          Length = 181942

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    ggtgctgggcatggccaggc 91
             ||||||||||||||||||||
Sbjct: 34064 ggtgctgggcatggccaggc 34083
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>emb|X05153.1|HSLACTG Human alpha-lactalbumin gene
          Length = 3310

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 192  ctggagtgaaacatggtacagatc 215
            |||| |||||||||||||||||||
Sbjct: 1566 ctggtgtgaaacatggtacagatc 1543
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>gb|AC089987.26| Homo sapiens 12q BAC RP11-722P11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 164945

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 192   ctggagtgaaacatggtacagatc 215
             |||| |||||||||||||||||||
Sbjct: 42369 ctggtgtgaaacatggtacagatc 42346
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>gb|AC079951.35| Homo sapiens 12q BAC RP11-346L11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 191942

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 192   ctggagtgaaacatggtacagatc 215
             |||| |||||||||||||||||||
Sbjct: 29984 ctggtgtgaaacatggtacagatc 30007
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>gb|AC022905.7| Homo sapiens chromosome 8, clone RP11-656G20, complete sequence
          Length = 184311

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    gctttgcaatacaactggct 133
              ||||||||||||||||||||
Sbjct: 141313 gctttgcaatacaactggct 141294
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>emb|CR542017.1| Homo sapiens full open reading frame cDNA clone RZPDo834F0535D for
           gene LALBA, lactalbumin, alpha-; complete cds, without
           stopcodon
          Length = 426

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 ctggagtgaaacatggtacagatc 215
           |||| |||||||||||||||||||
Sbjct: 158 ctggtgtgaaacatggtacagatc 135
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>emb|CR541987.1| Homo sapiens full open reading frame cDNA clone RZPDo834D0535D for
           gene LALBA, lactalbumin, alpha-; complete cds, incl.
           stopcodon
          Length = 429

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 ctggagtgaaacatggtacagatc 215
           |||| |||||||||||||||||||
Sbjct: 158 ctggtgtgaaacatggtacagatc 135
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>emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14, complete sequence
          Length = 151789

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    ttaacatattttacatcaga 49
             ||||||||||||||||||||
Sbjct: 52503 ttaacatattttacatcaga 52484
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>gb|AC157956.2| Pan troglodytes BAC clone CH251-379N13 from chromosome unknown, complete
              sequence
          Length = 164394

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     catattttacatcagaaagg 53
              ||||||||||||||||||||
Sbjct: 137099 catattttacatcagaaagg 137118
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>gb|AC011003.7|AC011003 Homo sapiens chromosome 8 clone RP11-86O15, complete sequence
          Length = 189042

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   gctttgcaatacaactggct 133
             ||||||||||||||||||||
Sbjct: 37105 gctttgcaatacaactggct 37086
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>gb|AY893973.1| Synthetic construct Homo sapiens clone FLH131260.01L lactalbumin
           alpha (LALBA) mRNA, partial cds
          Length = 429

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 ctggagtgaaacatggtacagatc 215
           |||| |||||||||||||||||||
Sbjct: 158 ctggtgtgaaacatggtacagatc 135
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>gb|AY893538.1| Synthetic construct Homo sapiens clone FLH131258.01X
           alpha-lactalbumin (LALBA) mRNA, complete cds
          Length = 429

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 ctggagtgaaacatggtacagatc 215
           |||| |||||||||||||||||||
Sbjct: 158 ctggtgtgaaacatggtacagatc 135
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>gb|BC112316.1| Homo sapiens lactalbumin, alpha-, mRNA (cDNA clone MGC:138521
           IMAGE:8327784), complete cds
          Length = 581

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 ctggagtgaaacatggtacagatc 215
           |||| |||||||||||||||||||
Sbjct: 180 ctggtgtgaaacatggtacagatc 157
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>gb|BC112318.1| Homo sapiens lactalbumin, alpha-, mRNA (cDNA clone MGC:138523
           IMAGE:8327786), complete cds
          Length = 581

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 ctggagtgaaacatggtacagatc 215
           |||| |||||||||||||||||||
Sbjct: 180 ctggtgtgaaacatggtacagatc 157
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>dbj|AB049976.1| Homo sapiens genes for alpha-lactalbumin, olfactory receptor like
            protein, complete cds
          Length = 32110

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 192  ctggagtgaaacatggtacagatc 215
            |||| |||||||||||||||||||
Sbjct: 6904 ctggtgtgaaacatggtacagatc 6881
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>gb|AC005701.1|AC005701 Homo sapiens chromosome 17, clone hRPK.628_E_12, complete sequence
          Length = 197455

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    cagttgttttcactttcttc 298
              ||||||||||||||||||||
Sbjct: 107648 cagttgttttcactttcttc 107629
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>gb|J00270.1|HUMLACTAL Homo sapiens alpha-lactalbumin (LALBA) mRNA, complete cds
          Length = 701

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 ctggagtgaaacatggtacagatc 215
           |||| |||||||||||||||||||
Sbjct: 158 ctggtgtgaaacatggtacagatc 135


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,000,166
Number of Sequences: 3902068
Number of extensions: 6000166
Number of successful extensions: 98264
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98165
Number of HSP's gapped (non-prelim): 98
length of query: 660
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 637
effective length of database: 17,143,297,704
effective search space: 10920280637448
effective search space used: 10920280637448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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