ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags21i17 |
|---|---|
| Clone Library Name | barley_pub |
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 274 bits (700), Expect = 2e-73 Identities = 132/142 (92%), Positives = 138/142 (97%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIH 476 WGDGLQTRSFTFIDECVEGVLRLTKSDF EPVNIGSDEMVSMNEMAEI+L FED++LPIH Sbjct: 237 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIH 296 Query: 475 HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKERTEGKDVARYGS 296 HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKE+T+G D+A YGS Sbjct: 297 HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYGS 356 Query: 295 SKVVSTQAPVQLGSLRAADGKE 230 SKVVSTQAPVQLGSLRAADGKE Sbjct: 357 SKVVSTQAPVQLGSLRAADGKE 378
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 265 bits (678), Expect = 7e-71 Identities = 128/142 (90%), Positives = 135/142 (95%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIH 476 WGDGLQTRSFTFIDECVEGVLRLTKSDF EPVNIGSDEMVSMNEMAEIVL FE+K+LPIH Sbjct: 230 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIH 289 Query: 475 HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKERTEGKDVARYGS 296 HIPGPEGVRGRNSDNTLIKEKLGWAPTM+LKDGLR TYFWIKEQ+EKE+ EG D++ YGS Sbjct: 290 HIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKAEGVDLSAYGS 349 Query: 295 SKVVSTQAPVQLGSLRAADGKE 230 SKVV TQAPVQLGSLRAADGKE Sbjct: 350 SKVVQTQAPVQLGSLRAADGKE 371
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man| 3,5-epimerase) Length = 377 Score = 261 bits (668), Expect = 1e-69 Identities = 126/142 (88%), Positives = 133/142 (93%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIH 476 WGDGLQTRSFTFIDECVEGVLRLTKSDF EPVNIGSDEMVSMNEMAE+VL FE+KKLPIH Sbjct: 236 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH 295 Query: 475 HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKERTEGKDVARYGS 296 HIPGPEGVRGRNSDN LIKEKLGWAP M+LK+GLR TYFWIKEQIEKE+ +G DV+ YGS Sbjct: 296 HIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGS 355 Query: 295 SKVVSTQAPVQLGSLRAADGKE 230 SKVV TQAPVQLGSLRAADGKE Sbjct: 356 SKVVGTQAPVQLGSLRAADGKE 377
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 60.1 bits (144), Expect = 6e-09 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 1/109 (0%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIH 476 +G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ + I Sbjct: 288 YGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQ 347 Query: 475 HIP-GPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKE 332 +P + + R D K LGW P + L++GL T + ++E + Sbjct: 348 FLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQYFSRELEHQ 396
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 58.5 bits (140), Expect = 2e-08 Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKS-DFCEPVNIGSDEMVSMNEMAEIV---LGFEDKK 488 WG G R F +D+ + V+ L E VN+GS V++ E+AE+V +GF+ K Sbjct: 218 WGTGSPLREFLHVDDLADAVIFLMDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKL 277 Query: 487 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQI 341 + P+G + D++ I+E +GW P + LK+GL TY W E + Sbjct: 278 --VWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPLKEGLVETYKWYVENV 323
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 58.2 bits (139), Expect = 2e-08 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 4/113 (3%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEG-VLRLTKSDFCEPVNIGSDEMVSMNEMAEIV---LGFEDKK 488 WG G R F +D+ + V + + E VN+GS V++ E+AE+V +GF+ K Sbjct: 218 WGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKL 277 Query: 487 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKER 329 + P+G + D++ + LGW P + LKDGL TY W E + +++ Sbjct: 278 --VWDTTKPDGTPRKLMDSSKLAS-LGWTPKISLKDGLSQTYEWYLENVVQKK 327
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 57.8 bits (138), Expect = 3e-08 Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 3/107 (2%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEP-VNIGSDEMVSMNEMAEIVLGFEDKK-LP 482 WG G R FT +D+ E V+ L + E VN+GS E V++ E+AE V G + + Sbjct: 234 WGSGAAAREFTHVDDLAEAVVVLMERYSGEEHVNVGSGEEVTVRELAEAVRGVVGYEGVV 293 Query: 481 IHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTY-FWIKEQ 344 PEGV R D+ ++ KLGW P + L+DG++ Y F+++ + Sbjct: 294 AWDAARPEGVARRVVDSGRMR-KLGWEPRVALRDGIQDLYRFYLRHE 339
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 56.6 bits (135), Expect = 6e-08 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 4/109 (3%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEG-VLRLTKSDFCEPVNIGSDEMVSMNEMAEIV---LGFEDKK 488 WG G R F +D+ + V L + E VNIGS + V++ E+AE+V +GFE K Sbjct: 204 WGTGSPLREFLHVDDLADACVFLLDRYSGLEHVNIGSGQEVTIRELAELVKEVVGFEGKL 263 Query: 487 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQI 341 P+G + D++ + LGW P + L+DGL TY W + + Sbjct: 264 G--WDCTKPDGTPRKLMDSSKLAS-LGWTPKVSLRDGLSQTYDWYLKNV 309
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 55.8 bits (133), Expect = 1e-07 Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIH 476 +G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ I Sbjct: 290 YGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ 349 Query: 475 HI-PGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 338 + + + R D K LGW P + L++GL + ++++E Sbjct: 350 FLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 55.8 bits (133), Expect = 1e-07 Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIH 476 +G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ I Sbjct: 290 YGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ 349 Query: 475 HI-PGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 338 + + + R D K LGW P + L++GL + ++++E Sbjct: 350 FLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 55.8 bits (133), Expect = 1e-07 Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIH 476 +G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ I Sbjct: 290 YGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ 349 Query: 475 HI-PGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 338 + + + R D K LGW P + L++GL + ++++E Sbjct: 350 FLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 55.8 bits (133), Expect = 1e-07 Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIH 476 +G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ I Sbjct: 290 YGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ 349 Query: 475 HI-PGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 338 + + + R D K LGW P + L++GL + ++++E Sbjct: 350 FLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 53.5 bits (127), Expect = 5e-07 Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 1/109 (0%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIH 476 +G G QTR+F ++ + V G++ L S+ PVN+G+ + S+ + A ++ I Sbjct: 291 YGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEIS 350 Query: 475 HI-PGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKE 332 + + + R D K LGW P + L++GL T + ++++E + Sbjct: 351 FLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKELEHQ 399
>Y1055_METJA (Q58455) Hypothetical protein MJ1055| Length = 326 Score = 48.1 bits (113), Expect = 2e-05 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Frame = -2 Query: 646 GLQTRSFTFIDECVEGVLRLTKSDF-CEPVNIGSDEMVSMNEMAEIVLGFEDKKLPIHHI 470 G R FT+I + V+G+LR K DF E N+G+ + V + E++ + +KK + Sbjct: 217 GNMERDFTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFL 276 Query: 469 PGPEG-VRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKE 347 P +G V +D + ++ LG+ P + +++GL+ W E Sbjct: 277 PMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGLKRFCNWFLE 318
>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 305 Score = 45.4 bits (106), Expect = 1e-04 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 3/105 (2%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIV---LGFEDKKL 485 +GDG QTR F ++ + + L + + E VNIG+ + S+NE+ +I+ +GF + + Sbjct: 200 FGDGNQTRDFVYVGDVAKANL-MALNWKNEIVNIGTGKETSVNELFDIIKHEIGFRGEAI 258 Query: 484 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIK 350 + EG R + E LGW P + LK+G++ W+K Sbjct: 259 ---YDKPREGEVYRIYLDIKKAESLGWKPEIDLKEGIKRVVNWMK 300
>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF| Length = 314 Score = 43.1 bits (100), Expect = 7e-04 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKS-DFCEPVNIGSDEMVSMNEMAEI---VLGFEDKK 488 WG G TR F + ++C + ++ L K E +NIGS +S+ E+A I V+GF K Sbjct: 206 WGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGGEISIIELAHIVCRVVGF--KG 263 Query: 487 LPIHHIPGPEGV-RGRNSDNTLIKEKLGWAPTMKLKDGLRFTY 362 + P+G R S L+ +GW P L+ GL +Y Sbjct: 264 DIVFDTSKPDGTPRKLLSSERLV--SMGWRPKTSLELGLAKSY 304
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 42.7 bits (99), Expect = 0.001 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 3/103 (2%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRL-TKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKL-P 482 +GDGL R + +D+ V G+ + T+ NIG +S E+ ++L Sbjct: 207 YGDGLNVREWLHVDDHVRGIEAVRTRGRAGRVYNIGGGATLSNKELVGLLLEAAGADWGS 266 Query: 481 IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMKLKDGLRFTYFW 356 + ++ +G R + D+T I+ +LG+AP + L DGL T W Sbjct: 267 VEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDLADGLAATVAW 309
>SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis protein spsJ| Length = 315 Score = 40.8 bits (94), Expect = 0.004 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 2/102 (1%) Frame = -2 Query: 655 WGDGLQTRSFTFI-DECVEGVLRLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLPI 479 +GDGLQ R + F D C L L K E NIG + E+A ++L + Sbjct: 208 YGDGLQIRDWLFAEDHCRAIKLILEKGTDGEVYNIGGGNERTNKELASVILKHLGCEELF 267 Query: 478 HHIPGPEGVRGRNSDN-TLIKEKLGWAPTMKLKDGLRFTYFW 356 H+ +G R + N + +K +LGW + ++G+ T W Sbjct: 268 AHVEDRKGHDRRYAINASKLKNELGWRQEVTFEEGIARTIQW 309
>NOLK_AZOCA (P33217) Nodulation protein nolK| Length = 312 Score = 38.9 bits (89), Expect = 0.014 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 5/103 (4%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEP--VNIGSDEMVSMNEMAEIV---LGFEDK 491 WGDG R F F + + +++ + P +N+G + +S+ E +V +G+ + Sbjct: 202 WGDGTARREFMFAYDFAKIIIKALEVPELIPSSMNVGVGKDLSVLEYYSLVARVIGWSGE 261 Query: 490 KLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTY 362 ++ + P G+R + D T + LGW P L+ G+R TY Sbjct: 262 F--VYDLNRPVGMRSKLMDITHLTA-LGWVPERSLEGGIRSTY 301
>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 348 Score = 38.5 bits (88), Expect = 0.018 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 9/120 (7%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLR-LTKSDFCEPVNIGSDEMVSMNEMAEIVLG-FEDKKLP 482 +G+G R + ++ GV LTK E IG+D + E+ E++L K Sbjct: 218 YGEGKNVRDWIHTNDHSTGVWAILTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNA 277 Query: 481 IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTM-KLKDGLRFTYFWIKE-----QIEKERTE 323 H+ G R + D+T ++E+LGW P ++GL T W E + EKE E Sbjct: 278 YDHVTDRAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAEKEAVE 337
>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 37.7 bits (86), Expect = 0.030 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 8/110 (7%) Frame = -2 Query: 652 GDGLQTRSFTFIDECVEGVLR-LTKSDFCEPVNIGSDEMVSMNEMA-EIVLGFEDKKLPI 479 G GLQTR+F + + VE L L K E NIG++ +S+ ++A E++ ++ Sbjct: 224 GSGLQTRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSES 283 Query: 478 HHIPGPEGVRGRNSDNTLIKEK------LGWAPTMKLKDGLRFTYFWIKE 347 + V R +++ K LGW P + K+G++ T W +E Sbjct: 284 EMENWVDYVNDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRE 333
>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)| Length = 334 Score = 37.0 bits (84), Expect = 0.052 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 24/124 (19%) Frame = -2 Query: 646 GLQTRSFTFIDECVEGVLRL----------------TKSDFCEP---VNIGSD---EMVS 533 G R FT+ID+ E ++RL T + P NIG+ E++ Sbjct: 211 GKMKRDFTYIDDIAEAIIRLQDVIPHADTQWTVETGTPAASIAPYRVYNIGNSSPVELMD 270 Query: 532 MNEMAEIVLGFEDKK--LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYF 359 + E LG E KK LP+ P V ++D + E +G+ P +KDG++ Sbjct: 271 YIQALEDALGIEAKKNMLPLQ----PGDVLETSADTKALYEVIGFTPETTVKDGVKNFVN 326 Query: 358 WIKE 347 W ++ Sbjct: 327 WYRD 330
>HLDD_DESVH (Q72ET7) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 323 Score = 37.0 bits (84), Expect = 0.052 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEPV-NIGSDEMVSMNEMAEIVLGFEDKKLPI 479 + DG Q R F ++ +CVE + L ++ V N+G+ + + N++ V D++ I Sbjct: 209 YADGGQMRDFIYVKDCVEVMWWLLQNPGVNGVFNVGTGKARTWNDLVTAVFRAMDREPVI 268 Query: 478 HHIPGPEGVRGR 443 +I PE +RG+ Sbjct: 269 EYIDMPEQLRGK 280
>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 36.6 bits (83), Expect = 0.068 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 13/122 (10%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEG---VLRLTKSDFCEP-------VNIGSDEMVSMNEMAEI-- 512 WG G R F +D+ V+ L + E +N+G+ ++ E+A+ Sbjct: 202 WGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIA 261 Query: 511 -VLGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEK 335 V+G++ + + P+G + D T + + LGW + L+ GL TY W E ++ Sbjct: 262 KVVGYKGRV--VFDASKPDGTPRKLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLENQDR 318 Query: 334 ER 329 R Sbjct: 319 FR 320
>RFFG_HAEIN (P44914) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 338 Score = 36.6 bits (83), Expect = 0.068 Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 16/116 (13%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEG-VLRLTKSDFCEPVNIGSD------EMVS-----MNEMAEI 512 +GDG Q R + F+++ V+ L LTK E NIG + E+V + E+A Sbjct: 217 YGDGQQIRDWLFVEDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPS 276 Query: 511 ----VLGFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFW 356 + +ED + PG + VR + D + I +LGW P + + GLR T W Sbjct: 277 KPNHIKYYEDLMTFVKDRPGHD-VR-YSLDCSKIHAELGWQPQITFEQGLRQTVKW 330
>TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 35.0 bits (79), Expect = 0.20 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 8/120 (6%) Frame = -2 Query: 652 GDGLQTRSFTFIDECVEGVLR-LTKSDFCEPVNIGSDEMVSMNEMA-EIVLGFEDKKLPI 479 G GLQ R+F + + VE L LTK + E NIG++ +S+ ++A E++ ++ Sbjct: 224 GSGLQRRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSES 283 Query: 478 HHIPGPEGVRGRNSDNTLIKEK------LGWAPTMKLKDGLRFTYFWIKEQIEKERTEGK 317 + V R ++ K LGW P + ++G++ T W ++ + K Sbjct: 284 ETESWVDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEK 343
>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 668 Score = 34.7 bits (78), Expect = 0.26 Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 22/136 (16%) Frame = -2 Query: 646 GLQTRSFTFIDECVEGVLRLT--KSDFC--EPVNIGS-DEMVSMNEMAEIVL-------- 506 G Q R FT I + +E + R+ ++D C + +NIG+ D S+ ++ E +L Sbjct: 533 GEQKRCFTDIADGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGEELLRQFEAHPL 592 Query: 505 --------GFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTY-FWI 353 GF D + + G + V R K L W PT+++ + + T F++ Sbjct: 593 RGNFPPFAGFRDVESKAFYGAGYQDVEHRKPSIDNAKRLLNWEPTVEMSETIGNTLDFFL 652 Query: 352 KEQIEKERTEGKDVAR 305 +E + + K AR Sbjct: 653 REAMLEIADRAKQEAR 668
>RFBB_NEIMA (Q9S642) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 341 Score = 34.7 bits (78), Expect = 0.26 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 14/114 (12%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRL-TKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP- 482 +GDG+Q R + F+++ + ++ T+ E NIG + E+ + + ++ P Sbjct: 217 YGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPE 276 Query: 481 -----------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMKLKDGLRFTYFW 356 I + G R + D I+ LGW P + GLR T W Sbjct: 277 KPAGVARYEDLITFVQDRPGHDARYAVDTAKIRRDLGWQPLETFESGLRKTVQW 330
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 33.5 bits (75), Expect = 0.57 Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 21/115 (18%) Frame = -2 Query: 646 GLQTRSFTFIDECVEGVLRL--TKSDFCEP--VNIGS-DEMVSMNEMAEIVLGFEDKKLP 482 G Q R FT I + +E + R+ D C+ +NIG+ D S+ E+A ++L DK Sbjct: 531 GQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPL 590 Query: 481 IHHIP----------------GPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFT 365 H P G + V R + LGW P++ ++D + T Sbjct: 591 RCHFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEET 645
>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic| region Length = 636 Score = 33.1 bits (74), Expect = 0.75 Identities = 27/95 (28%), Positives = 41/95 (43%) Frame = +3 Query: 297 DPYRATSFPSVLSFSICSLIQK*VNLRPSLSFIVGAQPSFSLMRVLSELRPRTPSGPGMW 476 D Y + P+ S+SI + PS+S P S + SE T + P + Sbjct: 101 DTYSSQYDPATSSYSI---------ITPSMSIFSSTSPMSSSSSITSEWSSLTSTTPTLS 151 Query: 477 WMGSFLSSKPRTISAISFMLTISSLPMFTGSQKSD 581 + LSS ++S+ S +L SSL + S SD Sbjct: 152 SSATSLSSSWSSLSSPSSLLVSSSLSLSLSSSYSD 186
>RFBB_NEIMB (P55294) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 32.7 bits (73), Expect = 0.98 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 14/114 (12%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRL-TKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP- 482 +GDG+Q R + F+++ + ++ T+ E NIG + E+ + + ++ P Sbjct: 217 YGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPE 276 Query: 481 -----------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMKLKDGLRFTYFW 356 I + G R + D I+ LGW P + GLR T W Sbjct: 277 KPAGVARYEDLITFVQDRPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQW 330
>RFBB_NEIGO (P37761) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 346 Score = 32.7 bits (73), Expect = 0.98 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 14/114 (12%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRL-TKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP- 482 +GDG Q R + F+++ + ++ T+ E NIG + E+ + + ++ P Sbjct: 222 YGDGAQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPE 281 Query: 481 -----------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMKLKDGLRFTYFW 356 I + G R + D I+ LGW P + GLR T W Sbjct: 282 KPAGVARYEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQW 335
>GALE_MOUSE (Q8R059) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 347 Score = 32.0 bits (71), Expect = 1.7 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Frame = -2 Query: 649 DGLQTRSFTFIDECVEGVL----RLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP 482 DG R + + + +G + +L + C N+G+ S+ +M + + KK+P Sbjct: 233 DGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRTYNLGTGTGYSVLQMVQAMEKASGKKIP 292 Query: 481 IHHIPGPEG-VRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKE 347 + EG V ++ +L E+LGW + L + W K+ Sbjct: 293 YKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQ 338
>LPSL_RHIME (O54067) UDP-glucuronate 5'-epimerase (EC 5.1.3.12) (UDP-glucuronic| acid epimerase) Length = 341 Score = 32.0 bits (71), Expect = 1.7 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 21/131 (16%) Frame = -2 Query: 655 WGDGLQTRSFTFIDECVEGVLRLTKSDFCEP--------------------VNIGSDEMV 536 +G+G +R FT+ID+ VE ++RL+ E VN G + V Sbjct: 209 YGEGRMSRDFTYIDDLVESIVRLSHVPPSEENRVAPEKATDTLSRHAPFRVVNTGGGQPV 268 Query: 535 SMNEMAEIVLGFEDKKLPIHHIPGPEGVRGRN-SDNTLIKEKLGWAPTMKLKDGLRFTYF 359 + E V + + +P +G R + L++ G+ P++ +++G+ Sbjct: 269 ELMTFVETVEKAVGRPAIHNMLPMQQGDVPRTFASPDLLEALTGFKPSVSVEEGVARFVE 328 Query: 358 WIKEQIEKERT 326 W + + T Sbjct: 329 WYDQNYRRAHT 339
>GALE_HUMAN (Q14376) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 348 Score = 32.0 bits (71), Expect = 1.7 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 5/106 (4%) Frame = -2 Query: 649 DGLQTRSFTFIDECVEGVL----RLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP 482 DG R + + + +G + +L + C N+G+ S+ +M + + KK+P Sbjct: 234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293 Query: 481 IHHIPGPEG-VRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKE 347 + EG V ++ +L +E+LGW + L + W K+ Sbjct: 294 YKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQ 339
>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 662 Score = 32.0 bits (71), Expect = 1.7 Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 21/127 (16%) Frame = -2 Query: 646 GLQTRSFTFIDECVEGVLRL--TKSDFCEP--VNIGS-DEMVSMNEMAEIVL-------- 506 G Q R FT +D+ +E + R+ + C+ VNIG+ D S+ ++ E +L Sbjct: 532 GAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPL 591 Query: 505 --------GFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIK 350 GF + + + G + V R + L W PT++L++ + T + Sbjct: 592 RAQFPPFAGFREVESRSFYGDGYQDVAHRKPSIDNARRLLDWQPTIELRETIGKTLDFFL 651 Query: 349 EQIEKER 329 + +ER Sbjct: 652 HEALRER 658
>GFRA3_MOUSE (O35118) GDNF family receptor alpha-3 precursor (GFR-alpha-3)| Length = 397 Score = 31.6 bits (70), Expect = 2.2 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = -2 Query: 187 PNCPPIGSFVAKTLENCTACPAYPMCDSADSSAPVHCHPH*LLSSCQQNSS 35 PNC + SF C A P+C S HCHP +L +C S Sbjct: 243 PNCLDLRSF----------CRADPLCRSRLMDFQTHCHPMDILGTCATEQS 283
>GALE_RAT (P18645) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 347 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Frame = -2 Query: 649 DGLQTRSFTFIDECVEGVL----RLTKSDFCEPVNIGSDEMVSMNEMAEIVLGFEDKKLP 482 DG R + + + +G + +L + C N+G+ S+ +M + + KK+P Sbjct: 233 DGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 292 Query: 481 IHHIPGPEG-VRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKE 347 + EG V ++ +L E+LGW + L + W K+ Sbjct: 293 YKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQ 338
>GFRA3_HUMAN (O60609) GDNF family receptor alpha-3 precursor (GFR-alpha-3)| Length = 400 Score = 30.8 bits (68), Expect = 3.7 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = -2 Query: 187 PNC--PPIGSFVAKTLENCTACPAYPMCDSADSSAPVHCHPH*LLSSCQQNSS 35 PNC PP+ LE C + P+C S HCHP +L +C S Sbjct: 237 PNCALPPVAP---NCLELRRLCFSDPLCRSRLVDFQTHCHPMDILGTCATEQS 286
>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic| region Length = 551 Score = 30.8 bits (68), Expect = 3.7 Identities = 34/105 (32%), Positives = 49/105 (46%) Frame = +3 Query: 315 SFPSVLSFSICSLIQK*VNLRPSLSFIVGAQPSFSLMRVLSELRPRTPSGPGMWWMGSFL 494 S PS+ S S S Q L +LS + ++ S S M+V S T S S Sbjct: 74 STPSIASVSFTSFPQSSSLL--TLSSTLSSELSSSSMQVSSS---STSSSSSEVTSSSSS 128 Query: 495 SSKPRTISAISFMLTISSLPMFTGSQKSDFVNLRTPSTHSSIKVN 629 SS + S+ + + + SSLP FT + S V T ST SS+ ++ Sbjct: 129 SSISPSSSSSTIISSSSSLPTFTVASTSSTVASSTLSTSSSLVIS 173
>ARNA_ERWCT (Q6D2F1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 673 Score = 30.8 bits (68), Expect = 3.7 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 21/128 (16%) Frame = -2 Query: 646 GLQTRSFTFIDECVEGVLRL--TKSDFCEP--VNIGSDEM-VSMNEMAEIVL-------- 506 G Q R FT I + +E + R+ ++ C+ +NIG+ S+ E+ E++L Sbjct: 538 GAQKRCFTDIHDGIEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPL 597 Query: 505 --------GFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIK 350 GF D + ++ G + V R K L W PT+K++ + T + Sbjct: 598 RDRFPPFAGFIDVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFL 657 Query: 349 EQIEKERT 326 ++ T Sbjct: 658 RTVDVPHT 665
>RY44_DROME (Q24498) Ryanodine receptor 44F| Length = 5127 Score = 30.4 bits (67), Expect = 4.9 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = +2 Query: 188 QWHNRPGVDMHSCLLLAVSRAEGAQLHRCLCGHHL 292 Q R G D H LL + AEGA+L C HHL Sbjct: 1974 QAFEREGKDEHRKGLLTMKMAEGAKLQMCYLLHHL 2008
>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 669 Score = 30.4 bits (67), Expect = 4.9 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 4/109 (3%) Frame = -2 Query: 652 GDGLQTRSFTFIDECVEGV-LRLTKSDFCEPVNIGSDEMVSMNEMAEIV--LGFEDKKLP 482 GDG RS+ + ++ E + L K + NIG+ + +N++A+ + L D + Sbjct: 217 GDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEAN 276 Query: 481 IHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIE 338 I + P + D+ +K KLGW+ ++GL+ T W + E Sbjct: 277 IKFVDNRPFNDQRYFLDDQKLK-KLGWSERTTWEEGLKKTMDWYTQNPE 324
>ALCR_EMENI (P21228) Regulatory protein alcR| Length = 821 Score = 30.4 bits (67), Expect = 4.9 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -3 Query: 165 PSLRKHLRIAQPALPTPCVIQQILVLLFIVTPIN--YYHRVNRI 40 P H +I+QPA PC +Q L TP+ Y RV ++ Sbjct: 566 PDHESHTQISQPAARWPCTYEQAAAALSSATPVKVLLYRRVTQL 609
>SO1C1_HUMAN (Q9NYB5) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Organic anion transporter F) (OATP-F) (Organic anion-transporting polypeptide 14) (Organic anion transporter polypeptide-related protein Length = 712 Score = 30.4 bits (67), Expect = 4.9 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Frame = +3 Query: 441 LRPRTPSGPGMWWMGSFLSSKPRTISAISFMLTISSLPMF-------TGSQKSDFV 587 + P+ P G WW+G ++ ++A+ F SLP + S+KS F+ Sbjct: 263 ITPKDPQWVGAWWLGYLIAGIISLLAAVPFWYLPKSLPRSQSREDSNSSSEKSKFI 318
>ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 663 Score = 30.0 bits (66), Expect = 6.3 Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 22/127 (17%) Frame = -2 Query: 646 GLQTRSFTFIDECVEGVLRLTKS-DFC---EPVNIGS-DEMVSMNEMAEIVL-------- 506 G Q R FT + + +E + R+ ++ D C + +NIG+ D S+ ++ E +L Sbjct: 533 GAQKRCFTDVADGIEALARIIENRDGCCNGQIINIGNPDNEASIRQLGEELLRQFEAHPL 592 Query: 505 --------GFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTY-FWI 353 GF + + + G + V R ++ +GW P ++L + + T F++ Sbjct: 593 RGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELSETIGKTLDFFL 652 Query: 352 KEQIEKE 332 +E + ++ Sbjct: 653 REAMAEK 659
>PANC_NEIMA (P57035) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 278 Score = 30.0 bits (66), Expect = 6.3 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -2 Query: 364 YFWIKEQIEKERTEGKDVARYGSSKVVSTQAPVQLGSLRAADGKE 230 Y W+ + +E R + +VAR G K+V A +LG+ R D E Sbjct: 231 YGWVVDYVEIRRVDTLEVARAGDKKLV-VLAAARLGTTRLIDNLE 274
>Y2889_PHOPR (Q6LN94) UPF0247 protein PBPRA2889| Length = 156 Score = 29.6 bits (65), Expect = 8.3 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Frame = -2 Query: 493 KKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYF------W----IKEQ 344 K +P+ I P G RG+N+D I +K G A + G R W + +Q Sbjct: 29 KDMPLELIEIPAGKRGKNADIARILQKEGEAMLATVAKGNRIVTLDIPGKRWDTGQLAQQ 88 Query: 343 IEKERTEGKDVA 308 ++ + +G+DV+ Sbjct: 89 LDSWKLDGRDVS 100
>POL_OMVVS (P16901) Pol polyprotein [Contains: Protease (EC 3.4.23.-)| (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23) (dUTPase); Integrase (IN)] Length = 1086 Score = 29.6 bits (65), Expect = 8.3 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = -2 Query: 607 VEGVLRLTKSDFCEPVNI-GSDEMVSMNEMAEIVLGFEDKKLPIHHIPGPEGVRGRNSDN 431 +EG + + S PV + G D M + ++ I+ E+KK+PI + EG +G + Sbjct: 91 IEGTIVVLPSS---PVEVLGRDNMAKL-DIGIIMANLEEKKIPITQVKLKEGCKGPHIAQ 146 Query: 430 TLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKERTEGK 317 W T + +GL KE ++K EGK Sbjct: 147 --------WPLTQEKLEGL-------KEIVDKLEKEGK 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,750,503 Number of Sequences: 219361 Number of extensions: 1931222 Number of successful extensions: 6327 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 6019 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6307 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
