ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21i14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome... 76 1e-10
2gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromos... 76 1e-10
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
4dbj|AK120821.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
5dbj|AK099809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
6emb|AJ535082.1|OSA535082 Oryza sativa (japonica cultivar-group) ... 74 5e-10
7ref|NM_189403.1| Oryza sativa (japonica cultivar-group), predic... 60 8e-06
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
9dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
10dbj|AK110805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
11dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
12gb|BC054668.1| Danio rerio zgc:66267, mRNA (cDNA clone MGC:66267... 42 1.9
13gb|BC066625.1| Danio rerio zgc:66267, mRNA (cDNA clone IMAGE:696... 42 1.9
14ref|XM_950085.1| Theileria annulata strain Ankara hypothetical p... 42 1.9
15ref|NM_200426.1| Danio rerio zgc:66267 (zgc:66267), mRNA 42 1.9
16gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell ... 42 1.9
17gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell ... 42 1.9
18ref|NM_132301.3| Drosophila melanogaster CG7065-RA (CG7065), mRNA 42 1.9
19gb|AY069601.1| Drosophila melanogaster LD35502 full length cDNA 42 1.9
20emb|BX248108.11| Zebrafish DNA sequence from clone CH211-221P4, ... 42 1.9
21gb|BT023505.1| Drosophila melanogaster LD15018 full insert cDNA 42 1.9
22dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
23emb|CR548627.7| Zebrafish DNA sequence from clone DKEYP-24A7 in ... 42 1.9
24gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 ... 42 1.9
25gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
26emb|AL935067.2|CNS08CCJ Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.9
27emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 1.9
28gb|AY510454.1| Aspergillus nomius isolate AN13137 aflatoxin bios... 40 7.4
29gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome... 40 7.4
30gb|AC123820.4| Mus musculus BAC clone RP23-461O5 from chromosome... 40 7.4
31emb|AL031985.10|HS228H13 Human DNA sequence from clone RP1-228H1... 40 7.4
32emb|CR378669.1| Photobacterium profundum SS9; segment 7/12 40 7.4
33gb|AC117806.11| Mus musculus chromosome 15, clone RP24-566D14, c... 40 7.4
34gb|AC008725.5| Homo sapiens chromosome 5 clone CTB-95D12, comple... 40 7.4
35gb|AC093909.2| Homo sapiens BAC clone RP11-756P10 from 4, comple... 40 7.4
36gb|AC090451.6| Homo sapiens chromosome 8, clone RP11-318N11, com... 40 7.4
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
38gb|AC083872.2|AC083872 Homo sapiens chromosome 7 clone RP11-639H... 40 7.4
39gb|AC009483.3|AC009483 Homo sapiens BAC clone RP11-303H5 from 2,... 40 7.4
40gb|AY040217.1| Lactobacillus delbrueckii subsp. bulgaricus ISLdl... 40 7.4
41gb|AC087856.6| Homo sapiens chromosome 8, clone RP11-4K16, compl... 40 7.4
42emb|BX000431.10| Zebrafish DNA sequence from clone DKEY-14B11 in... 40 7.4
43dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
44emb|AJ316615.2|LDE316615 Lactobacillus delbrueckii subsp. lactis... 40 7.4
45emb|AJ302652.1|LDE302652 Lactobacillus delbrueckii subsp.lactis ... 40 7.4
46gb|AC009514.2|AC009514 Homo sapiens chromosome 8 clone RP11-4K16... 40 7.4
47gb|AC120438.9| Mus musculus chromosome 7, clone RP24-572G2, comp... 40 7.4
48emb|AL844140.7| Mouse DNA sequence from clone RP23-428B12 on chr... 40 7.4 
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0068N01, complete sequence
          Length = 152233

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                         
Query: 461   aatcaatgttggatctcgcatagctcccagttcccctcaccatcgatgagtttaagctcc 520
             ||||| || ||||||||||||||||||||||| || || || ||||||||||| ||||||
Sbjct: 52016 aatcattggtggatctcgcatagctcccagtttccttctccgtcgatgagtttcagctcc 52075

                           
Query: 521   acggagtggaaggg 534
             | ||| ||||||||
Sbjct: 52076 aaggaatggaaggg 52089
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>gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromosome 5 BAC, complete
             sequence
          Length = 86190

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                         
Query: 461   aatcaatgttggatctcgcatagctcccagttcccctcaccatcgatgagtttaagctcc 520
             ||||| || ||||||||||||||||||||||| || || || ||||||||||| ||||||
Sbjct: 51227 aatcattggtggatctcgcatagctcccagtttccttctccgtcgatgagtttcagctcc 51286

                           
Query: 521   acggagtggaaggg 534
             | ||| ||||||||
Sbjct: 51287 aaggaatggaaggg 51300
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                          
Query: 461    aatcaatgttggatctcgcatagctcccagttcccctcaccatcgatgagtttaagctcc 520
              ||||| || ||||||||||||||||||||||| || || || ||||||||||| ||||||
Sbjct: 390369 aatcattggtggatctcgcatagctcccagtttccttctccgtcgatgagtttcagctcc 390428

                            
Query: 521    acggagtggaaggg 534
              | ||| ||||||||
Sbjct: 390429 aaggaatggaaggg 390442
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>dbj|AK120821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023017F21, full
            insert sequence
          Length = 3856

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                        
Query: 461  aatcaatgttggatctcgcatagctcccagttcccctcaccatcgatgagtttaagctcc 520
            ||||| || ||||||||||||||||||||||| || || || ||||||||||| ||||||
Sbjct: 3454 aatcattggtggatctcgcatagctcccagtttccttctccgtcgatgagtttcagctcc 3395

                          
Query: 521  acggagtggaaggg 534
            | ||| ||||||||
Sbjct: 3394 aaggaatggaaggg 3381
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>dbj|AK099809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099A18, full
            insert sequence
          Length = 3128

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                        
Query: 461  aatcaatgttggatctcgcatagctcccagttcccctcaccatcgatgagtttaagctcc 520
            ||||| || ||||||||||||||||||||||| || || || ||||||||||| ||||||
Sbjct: 2614 aatcattggtggatctcgcatagctcccagtttccttctccgtcgatgagtttcagctcc 2555

                          
Query: 521  acggagtggaaggg 534
            | ||| ||||||||
Sbjct: 2554 aaggaatggaaggg 2541
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>emb|AJ535082.1|OSA535082 Oryza sativa (japonica cultivar-group) pmp2 gene for peroxisomal
             membrane protein ABC transporter homologue, exons 1-27
          Length = 10805

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                         
Query: 470   tggatctcgcatagctcccagttcccctcaccatcgatgagtttaagctccacggagtgg 529
             ||||||||||||||||||||||| || || || ||||||||||| ||||||| ||| |||
Sbjct: 10798 tggatctcgcatagctcccagtttccttctccgtcgatgagtttcagctccaaggaatgg 10739

                  
Query: 530   aaggg 534
             |||||
Sbjct: 10738 aaggg 10734
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>ref|NM_189403.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3624

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 479  catagctcccagttcccctcaccatcgatgagtttaagctccacggagtggaagggtata 538
            ||||| ||||| || || ||||||||||||||||| |||||||  || ||||||||||| 
Sbjct: 3608 catagttcccactttccttcaccatcgatgagtttcagctccaacgaatggaagggtatc 3549

                  
Query: 539  agagca 544
            ||||||
Sbjct: 3548 agagca 3543
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 479      catagctcccagttcccctcaccatcgatgagtttaagctccacggagtggaagggtata 538
                ||||| ||||| || || ||||||||||||||||| |||||||  || ||||||||||| 
Sbjct: 42604341 catagttcccactttccttcaccatcgatgagtttcagctccaacgaatggaagggtatc 42604282

                      
Query: 539      agagca 544
                ||||||
Sbjct: 42604281 agagca 42604276



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 255      cattcagtttgttactaaatttggta 280
                |||| |||||||||||||||||||||
Sbjct: 25734013 catttagtttgttactaaatttggta 25734038
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>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0458E05
          Length = 193577

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                          
Query: 479    catagctcccagttcccctcaccatcgatgagtttaagctccacggagtggaagggtata 538
              ||||| ||||| || || ||||||||||||||||| |||||||  || ||||||||||| 
Sbjct: 125224 catagttcccactttccttcaccatcgatgagtttcagctccaacgaatggaagggtatc 125165

                    
Query: 539    agagca 544
              ||||||
Sbjct: 125164 agagca 125159
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>dbj|AK110805.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-E11, full
           insert sequence
          Length = 1368

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 479 catagctcccagttcccctcaccatcgatgagtttaagctccacggagtggaagggtata 538
           ||||| ||||| || || ||||||||||||||||| |||||||  || ||||||||||| 
Sbjct: 917 catagttcccactttccttcaccatcgatgagtttcagctccaacgaatggaagggtatc 858

                 
Query: 539 agagca 544
           ||||||
Sbjct: 857 agagca 852
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>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039G05
          Length = 138429

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 255   cattcagtttgttactaaatttggta 280
             |||| |||||||||||||||||||||
Sbjct: 36477 catttagtttgttactaaatttggta 36502
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>gb|BC054668.1| Danio rerio zgc:66267, mRNA (cDNA clone MGC:66267 IMAGE:5410623),
            complete cds
          Length = 1664

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 165  actgctgttctacactctcat 185
            |||||||||||||||||||||
Sbjct: 1266 actgctgttctacactctcat 1246
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>gb|BC066625.1| Danio rerio zgc:66267, mRNA (cDNA clone IMAGE:6960075), partial cds
          Length = 1571

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 165  actgctgttctacactctcat 185
            |||||||||||||||||||||
Sbjct: 1213 actgctgttctacactctcat 1193
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>ref|XM_950085.1| Theileria annulata strain Ankara hypothetical protein (TA04795)
           partial mRNA
          Length = 900

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 198 ctccaaatcgaaacacctctcaatc 222
           |||||||||||||| ||||||||||
Sbjct: 466 ctccaaatcgaaactcctctcaatc 490
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>ref|NM_200426.1| Danio rerio zgc:66267 (zgc:66267), mRNA
          Length = 1664

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 165  actgctgttctacactctcat 185
            |||||||||||||||||||||
Sbjct: 1266 actgctgttctacactctcat 1246
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>gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 182635

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 376    cgatatgaacaacttgctaca 396
              |||||||||||||||||||||
Sbjct: 108179 cgatatgaacaacttgctaca 108199
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>gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187230

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 376   cgatatgaacaacttgctaca 396
             |||||||||||||||||||||
Sbjct: 11857 cgatatgaacaacttgctaca 11837
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>ref|NM_132301.3| Drosophila melanogaster CG7065-RA (CG7065), mRNA
          Length = 4044

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 376  cgatatgaacaacttgctaca 396
            |||||||||||||||||||||
Sbjct: 2461 cgatatgaacaacttgctaca 2481
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>gb|AY069601.1| Drosophila melanogaster LD35502 full length cDNA
          Length = 1653

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 376 cgatatgaacaacttgctaca 396
           |||||||||||||||||||||
Sbjct: 44  cgatatgaacaacttgctaca 64
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>emb|BX248108.11| Zebrafish DNA sequence from clone CH211-221P4, complete sequence
          Length = 230610

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 133   cacatcaacagctgctctgagagag 157
             ||||||||||| |||||||||||||
Sbjct: 39939 cacatcaacagatgctctgagagag 39915
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>gb|BT023505.1| Drosophila melanogaster LD15018 full insert cDNA
          Length = 4229

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 376  cgatatgaacaacttgctaca 396
            |||||||||||||||||||||
Sbjct: 2462 cgatatgaacaacttgctaca 2482
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 260      agtttgttactaaatttggta 280
                |||||||||||||||||||||
Sbjct: 18542334 agtttgttactaaatttggta 18542354
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>emb|CR548627.7| Zebrafish DNA sequence from clone DKEYP-24A7 in linkage group 19,
             complete sequence
          Length = 146348

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 165   actgctgttctacactctcat 185
             |||||||||||||||||||||
Sbjct: 57539 actgctgttctacactctcat 57559
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>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete
             sequence
          Length = 290970

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 376   cgatatgaacaacttgctaca 396
             |||||||||||||||||||||
Sbjct: 97120 cgatatgaacaacttgctaca 97140
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 260      agtttgttactaaatttggta 280
                |||||||||||||||||||||
Sbjct: 18468560 agtttgttactaaatttggta 18468580
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>emb|AL935067.2|CNS08CCJ Oryza sativa chromosome 12, . BAC OSJNBa0072A13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 130954

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   agtttgttactaaatttggta 280
             |||||||||||||||||||||
Sbjct: 52956 agtttgttactaaatttggta 52936
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 183    catcctacttcacacctccaa 203
              |||||||||||||||||||||
Sbjct: 750078 catcctacttcacacctccaa 750098
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>gb|AY510454.1| Aspergillus nomius isolate AN13137 aflatoxin biosynthesis gene cluster,
             complete sequence
          Length = 75352

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   ataaaaactctagctggtgg 456
             ||||||||||||||||||||
Sbjct: 45091 ataaaaactctagctggtgg 45110
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>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete sequence
          Length = 184346

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   ctgttctacactctcatcct 188
             ||||||||||||||||||||
Sbjct: 77526 ctgttctacactctcatcct 77545
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>gb|AC123820.4| Mus musculus BAC clone RP23-461O5 from chromosome 7, complete sequence
          Length = 204757

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    gccaaatttattccatatgt 90
             ||||||||||||||||||||
Sbjct: 72066 gccaaatttattccatatgt 72047
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>emb|AL031985.10|HS228H13 Human DNA sequence from clone RP1-228H13 on chromosome 1p34.1-35.3
             Contains the gene for a novel protein, a ribosomal protein
             L21 (RPL21), a ribosomal protein L10a (RPL10A) and the
             gene for a novel zinc finger protein, complete sequence
          Length = 139737

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   ttgtacatgctgctcctgct 352
             ||||||||||||||||||||
Sbjct: 72935 ttgtacatgctgctcctgct 72916
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>emb|CR378669.1| Photobacterium profundum SS9; segment 7/12
          Length = 349285

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    atgaacaacttgctacagta 399
              ||||||||||||||||||||
Sbjct: 311462 atgaacaacttgctacagta 311481
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>gb|AC117806.11| Mus musculus chromosome 15, clone RP24-566D14, complete sequence
          Length = 194925

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 443    actctagctggtggtgtcaa 462
              ||||||||||||||||||||
Sbjct: 135090 actctagctggtggtgtcaa 135109
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>gb|AC008725.5| Homo sapiens chromosome 5 clone CTB-95D12, complete sequence
          Length = 127540

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 63    caacaacagccaaatttattccat 86
             ||||||||||||||||||| ||||
Sbjct: 54927 caacaacagccaaatttatcccat 54904
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>gb|AC093909.2| Homo sapiens BAC clone RP11-756P10 from 4, complete sequence
          Length = 181886

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    atcaataataggtttgataa 130
              ||||||||||||||||||||
Sbjct: 161570 atcaataataggtttgataa 161551
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>gb|AC090451.6| Homo sapiens chromosome 8, clone RP11-318N11, complete sequence
          Length = 160671

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   aatcaataataggtttgata 129
             ||||||||||||||||||||
Sbjct: 18672 aatcaataataggtttgata 18691
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 260      agtttgttactaaatttggt 279
                ||||||||||||||||||||
Sbjct: 27251344 agtttgttactaaatttggt 27251325
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>gb|AC083872.2|AC083872 Homo sapiens chromosome 7 clone RP11-639H21, complete sequence
          Length = 186609

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     atggcaacaacagccaaatt 78
              ||||||||||||||||||||
Sbjct: 173672 atggcaacaacagccaaatt 173691
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>gb|AC009483.3|AC009483 Homo sapiens BAC clone RP11-303H5 from 2, complete sequence
          Length = 206589

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 63     caacaacagccaaatttattccat 86
              ||||||||||||||||||| ||||
Sbjct: 191770 caacaacagccaaatttatcccat 191793
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>gb|AY040217.1| Lactobacillus delbrueckii subsp. bulgaricus ISLdl1 transposase
           gene, complete cds
          Length = 1512

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 500 ccatcgatgagtttaagctccacg 523
           |||| |||||||||||||||||||
Sbjct: 641 ccattgatgagtttaagctccacg 664
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>gb|AC087856.6| Homo sapiens chromosome 8, clone RP11-4K16, complete sequence
          Length = 169060

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   aatcaataataggtttgata 129
             ||||||||||||||||||||
Sbjct: 88968 aatcaataataggtttgata 88949
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>emb|BX000431.10| Zebrafish DNA sequence from clone DKEY-14B11 in linkage group 15,
             complete sequence
          Length = 200161

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ttcagtttgttactaaattt 276
             ||||||||||||||||||||
Sbjct: 69226 ttcagtttgttactaaattt 69207
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>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0637D03
          Length = 180159

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    agtttgttactaaatttggt 279
              ||||||||||||||||||||
Sbjct: 108360 agtttgttactaaatttggt 108341
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>emb|AJ316615.2|LDE316615 Lactobacillus delbrueckii subsp. lactis insertion sequences ISLdl2,
            ISLdl4, ISLdl1, ISLdl3 and ISL7 (partial)
          Length = 6354

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 500  ccatcgatgagtttaagctccacg 523
            |||| |||||||||||||||||||
Sbjct: 3800 ccattgatgagtttaagctccacg 3823
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>emb|AJ302652.1|LDE302652 Lactobacillus delbrueckii subsp.lactis insertion sequence ISLdl1,
           ORF1
          Length = 1508

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 500 ccatcgatgagtttaagctccacg 523
           |||| |||||||||||||||||||
Sbjct: 639 ccattgatgagtttaagctccacg 662
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>gb|AC009514.2|AC009514 Homo sapiens chromosome 8 clone RP11-4K16, complete sequence
          Length = 169059

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   aatcaataataggtttgata 129
             ||||||||||||||||||||
Sbjct: 88968 aatcaataataggtttgata 88949
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>gb|AC120438.9| Mus musculus chromosome 7, clone RP24-572G2, complete sequence
          Length = 169442

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   gccaaatttattccatatgt 90
            ||||||||||||||||||||
Sbjct: 9523 gccaaatttattccatatgt 9542
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>emb|AL844140.7| Mouse DNA sequence from clone RP23-428B12 on chromosome 4, complete
              sequence
          Length = 160681

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    aacagctgctctgagagaga 158
              ||||||||||||||||||||
Sbjct: 149520 aacagctgctctgagagaga 149539


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,242,011
Number of Sequences: 3902068
Number of extensions: 4242011
Number of successful extensions: 77038
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76835
Number of HSP's gapped (non-prelim): 203
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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