ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags21h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 1015 bits (512), Expect = 0.0 Identities = 527/532 (99%) Strand = Plus / Minus Query: 100 ctaagatgatacatttgcttcgatctggtgatggtatcaagattgttgaacagaaaatga 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctaagatgatacatttgcttcgatctggtgatggtatcaagattgttgaacagaaaatga 501 Query: 160 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 441 Query: 220 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 381 Query: 280 atttcatctcttggccatgggaaacattgtccatgttgtcacaaacggaagtcctgcatc 339 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 380 atttcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtccggcatc 321 Query: 340 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 261 Query: 400 gatagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcaga 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 gatagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcaga 201 Query: 460 ctggtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttct 519 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 ctggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttct 141 Query: 520 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacac 579 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 tgcagcaactcttggcttctacttggacctgctccagaactaaacccaatatgagaacac 81 Query: 580 aaataaccacgctcttaatactcttgttggttgccatggttggctggttggc 631 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 aaataaccacgctcttaatactcttgttggttgccatggttggctggttggc 29 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 75 cataatatatccatggaacttttat 99 ||||||||||||||||||||||||| Sbjct: 658 cataatatatccatggaacttttat 634
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 1015 bits (512), Expect = 0.0 Identities = 527/532 (99%) Strand = Plus / Minus Query: 100 ctaagatgatacatttgcttcgatctggtgatggtatcaagattgttgaacagaaaatga 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctaagatgatacatttgcttcgatctggtgatggtatcaagattgttgaacagaaaatga 501 Query: 160 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 441 Query: 220 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 381 Query: 280 atttcatctcttggccatgggaaacattgtccatgttgtcacaaacggaagtcctgcatc 339 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 380 atttcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtccggcatc 321 Query: 340 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 261 Query: 400 gatagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcaga 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 gatagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcaga 201 Query: 460 ctggtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttct 519 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 ctggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttct 141 Query: 520 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacac 579 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 tgcagcaactcttggcttctacttggacctgctccagaactaaacccaatatgagaacac 81 Query: 580 aaataaccacgctcttaatactcttgttggttgccatggttggctggttggc 631 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 aaataaccacgctcttaatactcttgttggttgccatggttggctggttggc 29
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 975 bits (492), Expect = 0.0 Identities = 507/512 (99%) Strand = Plus / Minus Query: 120 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 481 Query: 180 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcatta 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcatta 421 Query: 240 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccatgg 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 420 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 361 Query: 300 gaaacattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtc 359 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 360 gaaacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtc 301 Query: 360 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 241 Query: 420 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcg 181 Query: 480 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttct 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 180 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttct 121 Query: 540 acttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaata 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 acttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaata 61 Query: 600 ctcttgttggttgccatggttggctggttggc 631 |||||||||||||||||||||||||||||||| Sbjct: 60 ctcttgttggttgccatggttggctggttggc 29
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 926 bits (467), Expect = 0.0 Identities = 482/487 (98%) Strand = Plus / Minus Query: 100 ctaagatgatacatttgcttcgatctggtgatggtatcaagattgttgaacagaaaatga 159 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 487 ctaagatgatacatttgcttcgatgtggtgatggtatcaagattgttgaacagaaaatga 428 Query: 160 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 427 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagact 368 Query: 220 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 308 Query: 280 atttcatctcttggccatgggaaacattgtccatgttgtcacaaacggaagtcctgcatc 339 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 307 atttcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatc 248 Query: 340 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 188 Query: 400 gatagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcaga 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 gatagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcaga 128 Query: 460 ctggtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttct 519 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 ctggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttct 68 Query: 520 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacac 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacac 8 Query: 580 aaataac 586 ||||||| Sbjct: 7 aaataac 1
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 789 bits (398), Expect = 0.0 Identities = 410/414 (99%) Strand = Plus / Minus Query: 203 ttaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgct 262 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 263 gcagagtcccatgtcgaatttcatctcttggccatgggaaacattgtccatgttgtcaca 322 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 323 aacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 382 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 383 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 443 acaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtt 502 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115 Query: 503 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55 Query: 563 acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54 acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 1
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 755 bits (381), Expect = 0.0 Identities = 396/401 (98%) Strand = Plus / Minus Query: 100 ctaagatgatacatttgcttcgatctggtgatggtatcaagattgttgaacagaaaatga 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 ctaagatgatacatttgcttcgatctggtgatggtatcaagattgttgaacagaaaatga 342 Query: 160 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 219 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 aaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 282 Query: 220 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 222 Query: 280 atttcatctcttggccatgggaaacattgtccatgttgtcacaaacggaagtcctgcatc 339 ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 221 atttcatctcttggccacgggaaacattgtccaggttgtcacagacggaagtcctgcatc 162 Query: 340 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 102 Query: 400 gatagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcaga 459 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 gatagtccctaggacaggttgggccgcttatgattttacaaccacaagcagttgcgcaga 42 Query: 460 ctggtcgggaaccaccggcgaaacggcaggcgttgtagcag 500 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 41 ctggtcgggaaccaccggcgaaacggcaggcgttgtagcag 1
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 620 bits (313), Expect = e-174 Identities = 473/525 (90%), Gaps = 1/525 (0%) Strand = Plus / Minus Query: 101 taagatgatacatttgcttcgat-ctggtgatggtatcaagattgttgaacagaaaatga 159 ||||||||||||||| ||||||| | | |||||||||||||||| || || | ||||||| Sbjct: 542 taagatgatacatttccttcgatacagctgatggtatcaagattattcaagacaaaatga 483 Query: 160 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 219 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 482 caatacgaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagact 423 Query: 220 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 279 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 422 gaatgactgcaccatcattacaaaaacgggcacatgcgttgctgcagagtcccatgtcga 363 Query: 280 atttcatctcttggccatgggaaacattgtccatgttgtcacaaacggaagtcctgcatc 339 ||||||||||||||||| || |||||||||||||||||||||| || ||| ||||||||| Sbjct: 362 atttcatctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatc 303 Query: 340 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 399 |||| |||||||||| ||| ||| ||||||||||||||||||||||||||| || |||| Sbjct: 302 caatggtgcagtactgagtgacatctggttcaccggattcagggagaagattaagtttag 243 Query: 400 gatagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcaga 459 ||||||| ||||| ||| |||| || |||||||||||||||| ||||||| |||||||| Sbjct: 242 gatagtcactagggcattttggaccacttatgattttacaacgacaagcacctgcgcaga 183 Query: 460 ctggtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttct 519 |||| ||||||||||| ||||||||||| | ||||||||||||||| | ||||| || Sbjct: 182 ctggacgggaaccacccgcgaaacggcaagtgttgtagcagtttctagctaacgtgtcct 123 Query: 520 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacac 579 |||||||||| || || || || ||||||||||||||||||||||||| ||||||||||| Sbjct: 122 tgcagcaactttttccctccacctggacctgctccagaactaaacccagtatgagaacac 63 Query: 580 aaataaccacgctcttaatactcttgttggttgccatggttggct 624 |||| ||||| ||||||||||||||| ||| |||||||||||||| Sbjct: 62 aaatgaccacactcttaatactcttgctgggtgccatggttggct 18 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 58 aaaattgtggtgtatcacataatatatccatggaacttttat 99 |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 657 aaaattgtagtgtatcacataatatatccatggaacttttat 616
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 605 bits (305), Expect = e-170 Identities = 471/525 (89%), Gaps = 1/525 (0%) Strand = Plus / Minus Query: 101 taagatgatacatttgcttcgat-ctggtgatggtatcaagattgttgaacagaaaatga 159 |||||||||||||| ||||| || | | |||||||||||||||| || || | ||||||| Sbjct: 535 taagatgatacattggcttccatacagctgatggtatcaagattattcaagacaaaatga 476 Query: 160 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 219 ||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 475 caatacgaccatggccatagaaatcatgcacaagaaggcatgattaggcttcaacagact 416 Query: 220 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 279 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 gaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 356 Query: 280 atttcatctcttggccatgggaaacattgtccatgttgtcacaaacggaagtcctgcatc 339 ||||||||||||||||| || |||||||||||||||||||||| || ||| ||||||||| Sbjct: 355 atttcatctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatc 296 Query: 340 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 399 |||| |||||||||| || ||| |||||||||||||||||||||||||||||| |||| Sbjct: 295 caatggtgcagtactgcgtgacatctggttcaccggattcagggagaagattcagtttag 236 Query: 400 gatagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcaga 459 ||||||| ||||| ||| |||| || |||||||||||||||| ||||||| |||||||| Sbjct: 235 gatagtcactagggcattttggaccacttatgattttacaacgacaagcacctgcgcaga 176 Query: 460 ctggtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttct 519 |||| ||||||||||| |||||| |||| | ||||||||||||||| | ||||| || Sbjct: 175 ctggacgggaaccacccgcgaaatggcaagtgttgtagcagtttctagctaacgtgtcct 116 Query: 520 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacac 579 |||||||||| || || || || ||||||||||||||||||||||||| ||||||||||| Sbjct: 115 tgcagcaactttttccctccacctggacctgctccagaactaaacccagtatgagaacac 56 Query: 580 aaataaccacgctcttaatactcttgttggttgccatggttggct 624 |||| ||||| ||||||||||||||| ||| |||||||||||||| Sbjct: 55 aaatgaccacactcttaatactcttgctgggtgccatggttggct 11 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 71 atcacataatatatccatggaacttttat 99 ||||||||||||||||||||||||||||| Sbjct: 637 atcacataatatatccatggaacttttat 609
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 509 bits (257), Expect = e-141 Identities = 260/261 (99%) Strand = Plus / Minus Query: 371 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 430 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 431 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618 Query: 551 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1617 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 1558 Query: 611 tgccatggttggctggttggc 631 ||||||||||||||||||||| Sbjct: 1557 tgccatggttggctggttggc 1537 Score = 349 bits (176), Expect = 7e-93 Identities = 182/184 (98%) Strand = Plus / Minus Query: 121 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2237 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 2178 Query: 181 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2177 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 2118 Query: 241 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccatggg 300 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 2117 agaaacgggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacggg 2058 Query: 301 aaac 304 |||| Sbjct: 2057 aaac 2054 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Minus Query: 304 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcat 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 364 ttggttcacc 373 |||||||||| Sbjct: 1903 ttggttcacc 1894
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 448 bits (226), Expect = e-122 Identities = 329/362 (90%), Gaps = 1/362 (0%) Strand = Plus / Minus Query: 101 taagatgatacatttgcttcgat-ctggtgatggtatcaagattgttgaacagaaaatga 159 ||||||||||||||| ||||||| | | |||||||||||||||| || || | ||||||| Sbjct: 362 taagatgatacatttccttcgatacagctgatggtatcaagattattcaagacaaaatga 303 Query: 160 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 219 ||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 302 caatacgaccttggccatagaaatcatgcacaagaaggcatgattaggattcaacagact 243 Query: 220 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 279 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 242 gaatgactgcaccatcattacaaaaacgggcacatgcgttgctgcagagtcccatgtcga 183 Query: 280 atttcatctcttggccatgggaaacattgtccatgttgtcacaaacggaagtcctgcatc 339 |||||||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| Sbjct: 182 atttcatctcttggccatggaaaacattgtccatgttgtcacagacagaattcctgcatc 123 Query: 340 caattgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttag 399 |||| |||||||||| ||| ||| |||||||||||||||||||||||||| || |||| Sbjct: 122 caatggtgcagtactgagtgacatcgggttcaccggattcagggagaagattaagtttag 63 Query: 400 gatagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcaga 459 ||||||| ||||| ||| |||| || |||||||||||||||| ||||||| |||||||| Sbjct: 62 gatagtcactagggcattttggaccacttatgattttacaacgacaagcacctgcgcaga 3 Query: 460 ct 461 || Sbjct: 2 ct 1
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 287 bits (145), Expect = 2e-74 Identities = 185/197 (93%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 101 taagatgatacatttgcttcgat-ctggtgatggtatcaagattgttgaacagaaaatga 159 |||||||||||||| ||||| || | | |||||||||||||||| || || | ||||||| Sbjct: 2235 taagatgatacattggcttccatacagctgatggtatcaagattattcaagacaaaatga 2176 Query: 160 caaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagact 219 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2175 caatacgaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagact 2116 Query: 220 gaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 279 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2115 gaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcga 2056 Query: 280 atttcatctcttggcca 296 ||||||||||||||||| Sbjct: 2055 atttcatctcttggcca 2039 Score = 266 bits (134), Expect = 8e-68 Identities = 224/254 (88%) Strand = Plus / Minus Query: 371 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 430 |||||||||||||||||||||||| ||||||||||| ||||| ||| |||| || ||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 431 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 490 ||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| | ||||| |||||||||||| || || || || |||||||| Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597 Query: 551 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 610 ||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||| ||| Sbjct: 1596 ctccagaactaaaaccagtatgagaacacaaatgaccacactcttaatactcttgctggg 1537 Query: 611 tgccatggttggct 624 |||||||||||||| Sbjct: 1536 tgccatggttggct 1523 Score = 75.8 bits (38), Expect = 2e-10 Identities = 78/89 (87%), Gaps = 3/89 (3%) Strand = Plus / Minus Query: 11 ttaatatgaaacaattgatatacaagcaaacaacattaaaaaatttaaaaattgtggtgt 70 ||||||| |||| ||||||||||| | ||||||||| |||||| ||| |||| |||| Sbjct: 2394 ttaatataaaacgattgatatacatg-aaacaacatcggaaaattgaaa--ttgtagtgt 2338 Query: 71 atcacataatatatccatggaacttttat 99 ||||||||||||||||||||||||||||| Sbjct: 2337 atcacataatatatccatggaacttttat 2309 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 304 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcat 363 ||||||||||||||||||| || ||| || |||||||||| |||||||||| ||| ||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 364 ttggttcacc 373 ||||||||| Sbjct: 1877 ctggttcacc 1868
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 214 bits (108), Expect = 3e-52 Identities = 368/454 (81%), Gaps = 3/454 (0%) Strand = Plus / Minus Query: 166 gaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatga 225 ||||| ||||| ||||||||||| ||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 226 cttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 285 | |||| | ||||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 286 tctcttggccatgggaaacattgtccatgttgtcacaaacggaagtcctgcatccaattg 345 ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| || | Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 346 tgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagt 405 ||||||||||||| ||| ||||||||||||||| | ||||||| ||| |||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatagc 257 Query: 406 ccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagactggtc 465 | |||||||||| ||| || ||||||||| |||||| || ||||||| ||| | Sbjct: 256 catcaggacatgtt---ccgtctacgattttacatccacaaagagatgcgcagcgtggcc 200 Query: 466 gggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagc 525 ||||| ||||| ||||||||| |||| ||||||||||| | | ||| || ||||| Sbjct: 199 gggaagtaccggttaaacggcagacgttatagcagtttcttgcagatgtgctcgggcagc 140 Query: 526 aactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaaataa 585 ||||||| || ||||| ||||||||| ||||||||||||| | || ||| ||||||| | Sbjct: 139 aactctttccctctacctggacctgccccagaactaaacctagtacgaggacacaaagca 80 Query: 586 ccacgctcttaatactcttgttggttgccatggt 619 |||| | ||||| || ||| ||||||||||||| Sbjct: 79 ccacacacttaagacctttggtggttgccatggt 46
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 192 bits (97), Expect = 1e-45 Identities = 259/313 (82%) Strand = Plus / Minus Query: 312 atgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttca 371 ||||||||||||||||||||| |||||||||| ||||||||||||| |||| || |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 372 ccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatg 431 ||| |||||| |||||||| | | ||||| | || || ||||| |||| || || | Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267 Query: 432 attttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcg 491 | |||||||||||| | | |||||||||||| || | | |||| || ||||||||| | Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207 Query: 492 ttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgc 551 |||||||||||| | |||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgc 147 Query: 552 tccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggtt 611 |||||||||||||||| ||||| | ||||||||| | ||||| |||| |||| | || Sbjct: 146 tccagaactaaacccagcatgaggaaacaaataacagcactcttgatacccttgcttgtg 87 Query: 612 gccatggttggct 624 ||||||||||||| Sbjct: 86 gccatggttggct 74 Score = 75.8 bits (38), Expect = 2e-10 Identities = 116/142 (81%) Strand = Plus / Minus Query: 155 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 214 |||| |||||||||| ||||||||||||| | || | ||| |||||||||||| | || Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499 Query: 215 agactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 274 ||| || |||| |||| | |||||||||||| ||||||||||| |||||| | ||| Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439 Query: 275 gtcgaatttcatctcttggcca 296 ||||| ||||||||||||||| Sbjct: 438 gtcgatgttcatctcttggcca 417
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 113 bits (57), Expect = 7e-22 Identities = 114/133 (85%) Strand = Plus / Minus Query: 490 cgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacct 549 |||||||||||||||| |||| |||| ||||||||||||||| || ||||||||||| | Sbjct: 149 cgttgtagcagtttcttgccgtggtgtccttgcagcaactctttccctctacttggacat 90 Query: 550 gctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttgg 609 |||||||||||| ||||||| ||||||||||| ||||| ||||||| || |||| | Sbjct: 89 gctccagaactatccccaatacaagaacacaaatgaccacactcttaagacccttgatac 30 Query: 610 ttgccatggttgg 622 || |||||||||| Sbjct: 29 ttcccatggttgg 17
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73 Query: 551 ctccagaactaaacccaatatgag 574 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin Length = 641 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 189 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 130 Query: 551 ctccagaactaaacccaatatgag 574 |||||||| || |||| |||||| Sbjct: 129 ttccagaaccaaccccagtatgag 106
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene Length = 901 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 73 Query: 551 ctccagaactaaacccaatatgag 574 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81 Query: 551 ctccagaactaaacccaatatgag 574 |||||||| || |||| |||||| Sbjct: 80 ttccagaaccaaccccagtatgag 57
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds Length = 915 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 177 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 118 Query: 551 ctccagaactaaacccaatatgag 574 |||||||| || |||| |||||| Sbjct: 117 ttccagaaccaaccccagtatgag 94
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 518 cttgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaac 577 ||||||||||||||| || ||||||||||||||||||||||||| ||||||| || || Sbjct: 122 cttgcagcaactctttccctctacttggacctgctccagaactatccccaatacaaggac 63 Query: 578 acaaataaccacgctcttaa 597 |||||| || || ||||||| Sbjct: 62 acaaatgactacactcttaa 43
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| || ||| |||||||||||||||| ||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctacttgcacctg 73 Query: 551 ctccagaactaaacccaatatgag 574 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin Length = 535 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 520 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgag 574 ||||||||||||||||||||||||| || || |||||||| || |||| |||||| Sbjct: 127 tgcagcaactcttgccttctacttgcacatgttccagaaccaaccccagtatgag 73
>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin Length = 569 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| Sbjct: 107 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 48 Query: 551 ctccagaac 559 || ||||| Sbjct: 47 ttcgagaac 39
>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds Length = 1805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| Sbjct: 485 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 426 Query: 551 ctccagaac 559 || ||||| Sbjct: 425 ttcgagaac 417
>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring Length = 888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| ||| ||| || ||||||| |||||||||||||| || | ||| Sbjct: 132 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 73 Query: 551 ctccagaactaaacccaatatgag 574 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin Length = 567 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 491 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 550 ||||||||||||||| ||| ||| || ||||||| |||||||||||||| || | ||| Sbjct: 91 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 32 Query: 551 ctccagaactaaacccaatatgag 574 |||||||| || |||| |||||| Sbjct: 31 ttccagaaccaaccccagtatgag 8
>gb|AC139356.17| Medicago truncatula clone mth2-12c11, complete sequence Length = 120921 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 38 aaacaacattaaaaaatttaaaaat 62 ||||||||||||||||||||||||| Sbjct: 33519 aaacaacattaaaaaatttaaaaat 33543 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 38 aaacaacattaaaaaatttaaaaat 62 ||||||||||||||||||||||||| Sbjct: 22663 aaacaacattaaaaaatttaaaaat 22639 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 38 aaacaacattaaaaaatttaaaaat 62 ||||||||||||||||||||||||| Sbjct: 19740 aaacaacattaaaaaatttaaaaat 19764
>gb|AC120413.20| Mus musculus chromosome 5, clone RP24-458L16, complete sequence Length = 163011 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaatt 63 |||||||||||||||||||||| Sbjct: 411 aacattaaaaaatttaaaaatt 432
>gb|AC145906.2| Pan troglodytes BAC clone RP43-9J5 from 7, complete sequence Length = 220120 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 acaacattaaaaaatttaaaaa 61 |||||||||||||||||||||| Sbjct: 8116 acaacattaaaaaatttaaaaa 8137
>gb|AC002429.1| Homo sapiens BAC clone GS1-200K5 from 7, complete sequence Length = 234053 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaatt 63 |||||||||||||||||||||| Sbjct: 223866 aacattaaaaaatttaaaaatt 223845
>dbj|AB022159.1| Mus musculus Cctz-1 gene for chaperonin containing TCP-1 zeta-1 subunit, complete cds Length = 19505 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaatt 63 |||||||||||||||||||||| Sbjct: 4979 aacattaaaaaatttaaaaatt 4958
>gb|AC150556.1| Drosophila melanogaster clone BACR07H20, complete sequence Length = 183020 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 aaaaaatttaaaaattgtggt 68 ||||||||||||||||||||| Sbjct: 58753 aaaaaatttaaaaattgtggt 58773
>gb|AC122520.2| Mus musculus BAC clone RP24-470M22 from 6, complete sequence Length = 153520 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 taaaaaatttaaaaattgtgg 67 ||||||||||||||||||||| Sbjct: 99578 taaaaaatttaaaaattgtgg 99558
>gb|AC122496.2| Mus musculus BAC clone RP24-400K16 from 5, complete sequence Length = 180081 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tcacataatatatccatggaa 92 ||||||||||||||||||||| Sbjct: 155539 tcacataatatatccatggaa 155559
>emb|AL356115.9| Human DNA sequence from clone RP11-486O22 on chromosome 10 Contains the 3' end of a novel gene (KIAA1128, FLJ14262, FLJ25809) , the 5' end of a Siah-interacting protein (SIP) (calcyclin binding protein) pseudogene, ribosomal protein S3A pseudogene 5 (RPS3AP5) and two CpG islands, complete sequence Length = 150151 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 gtatcacataatatatccatg 89 ||||||||||||||||||||| Sbjct: 8649 gtatcacataatatatccatg 8629
>emb|AL109934.22|HSDJ81L22 Human DNA sequence from clone RP1-81L22 on chromosome 6, complete sequence Length = 95347 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 acattaaaaaatttaaaaatt 63 ||||||||||||||||||||| Sbjct: 62552 acattaaaaaatttaaaaatt 62532
>emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in linkage group 3, complete sequence Length = 240105 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 catgggaaacattgtccatgt 315 ||||||||||||||||||||| Sbjct: 160447 catgggaaacattgtccatgt 160427
>gb|AC074321.10| Homo sapiens chromosome 10 clone RP11-122F14, complete sequence Length = 177203 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 gtatcacataatatatccatg 89 ||||||||||||||||||||| Sbjct: 41668 gtatcacataatatatccatg 41688
>gb|AC013247.8| Drosophila melanogaster, chromosome 2R, region 41D-41E, BAC clone BACR06P07, complete sequence Length = 187793 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 aaaaaatttaaaaattgtggt 68 ||||||||||||||||||||| Sbjct: 108759 aaaaaatttaaaaattgtggt 108739
>ref|XM_679359.1| PREDICTED: Danio rerio similar to CG40351-PA.3 (LOC556535), mRNA Length = 7195 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 catgggaaacattgtccatgt 315 ||||||||||||||||||||| Sbjct: 483 catgggaaacattgtccatgt 503
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 cattaaaaaatttaaaaattgtggt 68 |||||| |||||||||||||||||| Sbjct: 22663233 cattaacaaatttaaaaattgtggt 22663257 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 taatatgaaacaattgatata 32 ||||||||||||||||||||| Sbjct: 16906587 taatatgaaacaattgatata 16906607
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 taatatgaaacaattgatata 32 ||||||||||||||||||||| Sbjct: 23615123 taatatgaaacaattgatata 23615143 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattg 64 |||||||||||||||||||| Sbjct: 21777550 attaaaaaatttaaaaattg 21777531
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 caagattgttgaacagaaaat 157 ||||||||||||||||||||| Sbjct: 6740764 caagattgttgaacagaaaat 6740784
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence Length = 209156 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 ttgtccatgttgtcacaaacggaag 330 ||||||||||||||||||| ||||| Sbjct: 87238 ttgtccatgttgtcacaaatggaag 87262
>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence Length = 196848 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 acattaaaaaatttaaaaatt 63 ||||||||||||||||||||| Sbjct: 62602 acattaaaaaatttaaaaatt 62622
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 cattaaaaaatttaaaaattgtggt 68 |||||| |||||||||||||||||| Sbjct: 136734 cattaacaaatttaaaaattgtggt 136758
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 taatatgaaacaattgatata 32 ||||||||||||||||||||| Sbjct: 67564 taatatgaaacaattgatata 67584
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 caagattgttgaacagaaaat 157 ||||||||||||||||||||| Sbjct: 61817 caagattgttgaacagaaaat 61837
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1111C03 Length = 144879 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 cattaaaaaatttaaaaattgtggt 68 |||||| |||||||||||||||||| Sbjct: 32027 cattaacaaatttaaaaattgtggt 32051
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 taatatgaaacaattgatata 32 ||||||||||||||||||||| Sbjct: 53598 taatatgaaacaattgatata 53618
>emb|BX284620.5| Zebrafish DNA sequence from clone CH211-218E20 in linkage group 20, complete sequence Length = 201942 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaat 62 ||||||||||||||||||||| Sbjct: 93178 aacattaaaaaatttaaaaat 93158
>gb|AE003787.5| Drosophila melanogaster chromosome 2R, section 2 of 73 of the complete sequence Length = 294609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 aaaaaatttaaaaattgtggt 68 ||||||||||||||||||||| Sbjct: 112200 aaaaaatttaaaaattgtggt 112220
>emb|AL928885.9| Zebrafish DNA sequence from clone CH211-195G24 in linkage group 3, complete sequence Length = 196857 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 catgggaaacattgtccatgt 315 ||||||||||||||||||||| Sbjct: 42229 catgggaaacattgtccatgt 42209
>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA, complete genome Length = 697724 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaat 62 ||||||||||||||||||||| Sbjct: 257683 aacattaaaaaatttaaaaat 257663
>gb|AC121851.4| Mus musculus chromosome 8 clone RP24-92F5, complete sequence Length = 184603 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 82203 ttaaaaaatttaaaaattgt 82222
>ref|XM_629332.1| Dictyostelium discoideum hypothetical protein (DDB0191787), partial mRNA Length = 3195 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 acaacattaaaaaatttaaaaatt 63 ||||||||||| |||||||||||| Sbjct: 3118 acaacattaaagaatttaaaaatt 3095
>gb|AC167126.6| Mus musculus chromosome 1, clone RP24-104I19, complete sequence Length = 156900 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 123386 aacattaaaaaatttaaaaa 123405
>gb|AF001295.1| Homo sapiens tyrosinase related protein 1 (TYRP1) gene, complete cds Length = 24667 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cattaaaaaatttaaaaatt 63 |||||||||||||||||||| Sbjct: 3140 cattaaaaaatttaaaaatt 3121
>gb|AC138210.10| Mus musculus chromosome 1, clone RP23-346B12, complete sequence Length = 206044 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 156315 aacattaaaaaatttaaaaa 156296
>gb|AC149231.2| Pan troglodytes BAC clone CH251-481H1 from 7, complete sequence Length = 217836 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattgtggt 68 |||||||| ||||||||||||||| Sbjct: 202296 attaaaaactttaaaaattgtggt 202273
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15 Length = 1523 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 cgtgttcttgcagcaactct 531 |||||||||||||||||||| Sbjct: 947 cgtgttcttgcagcaactct 966
>gb|AC147094.2| Pan troglodytes BAC clone RP43-52H15 from 7, complete sequence Length = 183596 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattgtggt 68 |||||||| ||||||||||||||| Sbjct: 139056 attaaaaactttaaaaattgtggt 139033
>gb|U89350.1|DDU89350 Dictyostelium discoideum golvesin (gol) gene, complete cds Length = 2500 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 26 ttaaaaaatttaaaaattgt 7
>gb|AC005158.3| Homo sapiens BAC clone GS1-250N6 from 7, complete sequence Length = 266344 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 196963 ttaaaaaatttaaaaattgt 196982
>emb|BX908387.8| Zebrafish DNA sequence from clone DKEY-45B6 in linkage group 3, complete sequence Length = 212624 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 58 aaaattgtggtgtatcacataatatatc 85 ||||||||||| || ||||||||||||| Sbjct: 42463 aaaattgtggtttaacacataatatatc 42436
>emb|Z83229.1|CEF54F11 Caenorhabditis elegans Cosmid F54F11, complete sequence Length = 20836 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 4335 ttaaaaaatttaaaaattgt 4354
>gb|AC102769.11| Mus musculus chromosome 17, clone RP23-89A3, complete sequence Length = 162417 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 acaacattaaaaaatttaaa 59 |||||||||||||||||||| Sbjct: 112543 acaacattaaaaaatttaaa 112524
>gb|AC124434.3| Mus musculus BAC clone RP24-250K22 from chromosome 8, complete sequence Length = 167741 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 9683 ttaaaaaatttaaaaattgt 9702
>gb|AC120837.6| Mus musculus Strain C57BL6/J chromosome 11 BAC, RP23-439E2, Complete Sequence, complete sequence Length = 211996 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 9046 aacattaaaaaatttaaaaa 9027
>gb|AC124194.3| Mus musculus BAC clone RP23-277L21 from 2, complete sequence Length = 181676 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 aacaacattaaaaaatttaaaaat 62 ||||||| |||||||||||||||| Sbjct: 36305 aacaacaataaaaaatttaaaaat 36282
>ref|XM_672981.1| Plasmodium berghei strain ANKA N-acetylglucosamine-1-phosphate transferase (PB000880.00.0) partial mRNA Length = 1203 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aaaaaatttaaaaattgtgg 67 |||||||||||||||||||| Sbjct: 971 aaaaaatttaaaaattgtgg 952
>ref|XM_719171.1| Plasmodium yoelii yoelii str. 17XNL N-acetylglucosamine-1-phosphate transferase (PY00432) partial mRNA Length = 1338 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aaaaaatttaaaaattgtgg 67 |||||||||||||||||||| Sbjct: 1106 aaaaaatttaaaaattgtgg 1087
>ref|XM_725615.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02786) partial mRNA Length = 1467 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 attaaaaaatttaaaaattg 64 |||||||||||||||||||| Sbjct: 909 attaaaaaatttaaaaattg 928
>ref|XM_950155.1| Theileria annulata strain Ankara hypothetical protein (TA05190) partial mRNA Length = 4128 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 acaacattaaaaaatttaaa 59 |||||||||||||||||||| Sbjct: 1639 acaacattaaaaaatttaaa 1620
>gb|AC096909.10| Rattus norvegicus 8 BAC CH230-88B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 241078 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattg 64 |||||||||||||||||||| Sbjct: 69800 attaaaaaatttaaaaattg 69781
>emb|Z98050.1|HS451B15 Human DNA sequence from clone RP3-451B15 on chromosome 6p24 Contains the 3' end of the HIVEP1 gene for human immunodeficiency virus type I enhancer-binding protein 1, the EDN1 gene for endothelin 1 (ET1) and a SMT3 suppressor of mif two 3 homolog 1 (yeast) (SMT3H1) pseudogene, complete sequence Length = 186510 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 aaacaacattaaaaaatttaaaaa 61 |||||||| ||||||||||||||| Sbjct: 172832 aaacaacagtaaaaaatttaaaaa 172855
>emb|AL691523.6| Human DNA sequence from clone RP13-531C17 on chromosome 1 Contains the 5' end of the gene for glycine- glutamate- thienylcyclohexylpiperidine-binding protein (KIAA0562), the DFFB gene for DNA fragmentation factor 40kDa beta polypeptide (caspase-activated DNase), the 3' end of the gene for a novel protein and three CpG islands, complete sequence Length = 69982 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 acattaaaaaatttaaaaat 62 |||||||||||||||||||| Sbjct: 17720 acattaaaaaatttaaaaat 17739
>emb|AL499605.6| Human DNA sequence from clone RP11-478L17 on chromosome 1, complete sequence Length = 188350 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 58389 ttaaaaaatttaaaaattgt 58370
>emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on chromosome 13 Contains the gene for a novel protein (FLJ31208), three novel genes, a novel pseudogene and three CpG islands, complete sequence Length = 178850 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aaaaatttaaaaattgtggt 68 |||||||||||||||||||| Sbjct: 24620 aaaaatttaaaaattgtggt 24639
>gb|AC092003.3| Felis catus clone RP86-137F8, complete sequence Length = 157615 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 35135 aacattaaaaaatttaaaaa 35116
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence Length = 173428 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 cgtgttcttgcagcaactct 531 |||||||||||||||||||| Sbjct: 54209 cgtgttcttgcagcaactct 54190
>emb|AL355581.14| Human DNA sequence from clone RP11-73O6 on chromosome 6 Contains the 3' end of the gene for KIAA1798 protein, a novel genen and the 3' end of a novel gene, complete sequence Length = 140446 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 9476 ttaaaaaatttaaaaattgt 9495
>emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on chromosome 13, complete sequence Length = 159981 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 ttaatactcttgttggttgc 613 |||||||||||||||||||| Sbjct: 131995 ttaatactcttgttggttgc 131976
>emb|AL161730.9| Human DNA sequence from clone RP11-441I5 on chromosome 9 Contains the DMRTA1 gene for DMRT-like family A1 (DMO) and a CpG island, complete sequence Length = 170066 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 96147 aacattaaaaaatttaaaaa 96166
>emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chromosome 1p32.1-33 Contains the 3' ends of genes FLJ34719 and KIAA0191, complete sequence Length = 127006 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cattaaaaaatttaaaaatt 63 |||||||||||||||||||| Sbjct: 101290 cattaaaaaatttaaaaatt 101271
>emb|AL138753.8| Human DNA sequence from clone RP11-3L8 on chromosome 9 Contains the TYRP1 gene for tyrosinase-related protein 1, the 3' end of a novel gene and the 5' end of a novel gene (FLJ38505 FLJ90271), complete sequence Length = 162151 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cattaaaaaatttaaaaatt 63 |||||||||||||||||||| Sbjct: 68805 cattaaaaaatttaaaaatt 68786
>ref|XM_964873.1| PREDICTED: Tribolium castaneum similar to CG2091-PA (LOC658490), mRNA Length = 1992 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aaaaatttaaaaattgtggt 68 |||||||||||||||||||| Sbjct: 1075 aaaaatttaaaaattgtggt 1094
>emb|AL603745.16| Mouse DNA sequence from clone RP23-392I13 on chromosome 11 Contains the 5' end of the Rad51l3 gene for RAD51-like 3 (S. cerevisiae), two novel genes, the gene for a novel WD40 repeat containing protein, the Cmya4 gene for cardiomyopathy associated 4, a novel gene, the Slfn5, Slfn9, Slfn8 and Slfn2 genes for schlafen 5, 9, 8 and 2, a SET domain-containing protein 8 (Set8) pseudogene, a ribosomal protein L12 (Rpl12) pseudogene, a schlafen (Slfn) pseudogene and a CpG island, complete sequence Length = 198392 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 88943 aacattaaaaaatttaaaaa 88962
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 70674 ttaaaaaatttaaaaattgt 70655
>emb|BX936305.18| Zebrafish DNA sequence from clone CH211-51N3 in linkage group 13, complete sequence Length = 150383 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aaaaatttaaaaattgtggt 68 |||||||||||||||||||| Sbjct: 117138 aaaaatttaaaaattgtggt 117157
>emb|BX323005.6| Mouse DNA sequence from clone RP23-125G4 on chromosome 11 no genes, complete sequence Length = 9359 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaattgt 65 |||||| ||||||||||||||||| Sbjct: 4158 aacatttaaaaatttaaaaattgt 4135
>gb|AC026367.14| Homo sapiens 12 BAC RP11-131L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181445 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 56981 aacattaaaaaatttaaaaa 57000
>emb|CR352326.5| Zebrafish DNA sequence from clone CH211-105K20 in linkage group 13, complete sequence Length = 174828 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 140464 aacattaaaaaatttaaaaa 140445
>gb|AC104961.7| Homo sapiens chromosome 18, clone RP11-958F21, complete sequence Length = 184371 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 152105 ttaaaaaatttaaaaattgt 152124
>gb|AC008761.8| Homo sapiens chromosome 19 clone CTD-3149D2, complete sequence Length = 226170 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 aaacaacattaaaaaatttaaaaa 61 |||||| ||||||||||||||||| Sbjct: 217916 aaacaaaattaaaaaatttaaaaa 217939
>gb|AC091565.10| Homo sapiens chromosome 15, clone RP11-228M15, complete sequence Length = 180741 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattgtggt 68 ||||||||||||||| |||||||| Sbjct: 168528 attaaaaaatttaaatattgtggt 168505
>gb|AC025138.14| Homo sapiens chromosome 15, clone RP11-291O21, complete sequence Length = 173173 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattgtggt 68 ||||||||||||||| |||||||| Sbjct: 92352 attaaaaaatttaaatattgtggt 92329
>dbj|AB028971.1| Homo sapiens mRNA for KIAA1048 protein, partial cds Length = 4506 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 aaacaacattaaaaaatttaaaaa 61 |||||| ||||||||||||||||| Sbjct: 3734 aaacaaaattaaaaaatttaaaaa 3757
>gb|AC060232.6| Homo sapiens chromosome 10 clone RP11-458D17, complete sequence Length = 167912 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 93993 aacattaaaaaatttaaaaa 94012
>gb|AC114323.2| Homo sapiens chromosome 5 clone RP11-93N19, complete sequence Length = 172823 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 73720 aacattaaaaaatttaaaaa 73701
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 gttgccatggttggctggtt 628 |||||||||||||||||||| Sbjct: 1035668 gttgccatggttggctggtt 1035649
>gb|AC007184.4| Arabidopsis thaliana chromosome 2 clone T11P11 map mi54, complete sequence Length = 17599 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 16144 ttaaaaaatttaaaaattgt 16163
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 1550 ttaaaaaatttaaaaattgt 1569
>gb|AC023395.8| Homo sapiens chromosome 18, clone RP11-484N16, complete sequence Length = 160084 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 72209 aacattaaaaaatttaaaaa 72228
>gb|AC105114.3| Homo sapiens chromosome 18, clone CTD-2576N18, complete sequence Length = 167827 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 39745 ttaaaaaatttaaaaattgt 39764
>gb|AC096760.3| Homo sapiens BAC clone RP11-577B11 from 4, complete sequence Length = 99511 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 taaaaaatttaaaaattgtg 66 |||||||||||||||||||| Sbjct: 65261 taaaaaatttaaaaattgtg 65280
>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence Length = 171987 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 attaaaaaatttaaaaattgtggt 68 ||||||||||||||| |||||||| Sbjct: 165344 attaaaaaatttaaatattgtggt 165367
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 aacccaatatgagaacacaa 581 |||||||||||||||||||| Sbjct: 112938 aacccaatatgagaacacaa 112957
>emb|BX569789.4| Zebrafish DNA sequence from clone DKEY-68O6 in linkage group 3, complete sequence Length = 244662 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 58 aaaattgtggtgtatcacataatatatc 85 ||||||||||| || ||||||||||||| Sbjct: 147038 aaaattgtggtttaacacataatatatc 147065
>gb|DP000032.1| Felis catus target 116 genomic scaffold Length = 376810 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 199178 aacattaaaaaatttaaaaa 199159
>emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 in linkage group 6, complete sequence Length = 148605 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 acattaaaaaatttaaaaat 62 |||||||||||||||||||| Sbjct: 68947 acattaaaaaatttaaaaat 68928
>gb|AC135348.5| Homo sapiens chromosome 17, clone RP13-822L18, complete sequence Length = 111302 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattgtggt 68 ||||||||||||||| |||||||| Sbjct: 46392 attaaaaaatttaaatattgtggt 46369
>gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3p, complete sequence Length = 177721 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 aagattgttgaacagaaaat 157 |||||||||||||||||||| Sbjct: 113658 aagattgttgaacagaaaat 113677
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 23905701 ttaaaaaatttaaaaattgt 23905682
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 4141056 ttaaaaaatttaaaaattgt 4141075
>gb|AC105346.3| Homo sapiens BAC clone RP11-691D7 from 2, complete sequence Length = 76425 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattg 64 |||||||||||||||||||| Sbjct: 16354 attaaaaaatttaaaaattg 16335
>gb|AC079121.5| Homo sapiens BAC clone RP11-368O9 from 2, complete sequence Length = 79228 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 aaacaacattaaaaaatttaaaaa 61 |||||| ||||||||||||||||| Sbjct: 4597 aaacaaaattaaaaaatttaaaaa 4574
>gb|AC138748.4| Homo sapiens chromosome 15, clone RP11-382A4, complete sequence Length = 71640 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 attaaaaaatttaaaaattgtggt 68 ||||||||||||||| |||||||| Sbjct: 32035 attaaaaaatttaaatattgtggt 32058
>gb|AC079300.4| Homo sapiens BAC clone RP11-144B9 from 2, complete sequence Length = 113889 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 taaaaaatttaaaaattgtg 66 |||||||||||||||||||| Sbjct: 15517 taaaaaatttaaaaattgtg 15498
>gb|AC137568.8| Homo sapiens chromosome 15, clone RP11-1217C12, complete sequence Length = 199045 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattgtggt 68 ||||||||||||||| |||||||| Sbjct: 156805 attaaaaaatttaaatattgtggt 156782
>gb|AF274572.4| Homo sapiens chromosome X clone RP4-741O10 map q28, complete sequence Length = 126522 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 acaagcaaacaacattaaaaaatt 55 |||| ||||||||||||||||||| Sbjct: 77258 acaaacaaacaacattaaaaaatt 77281
>gb|AC078974.4| Homo sapiens BAC clone RP11-60H5 from 2, complete sequence Length = 28184 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattg 64 |||||||||||||||||||| Sbjct: 24359 attaaaaaatttaaaaattg 24340
>gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, complete sequence Length = 180708 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattgtggt 68 ||||||||||||||| |||||||| Sbjct: 12906 attaaaaaatttaaatattgtggt 12883
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 attaaaaaatttaaaaattg 64 |||||||||||||||||||| Sbjct: 94733 attaaaaaatttaaaaattg 94714
>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence Length = 172551 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 aacccaatatgagaacacaa 581 |||||||||||||||||||| Sbjct: 31644 aacccaatatgagaacacaa 31663
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 88027 ttaaaaaatttaaaaattgt 88046
>dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, map 22, complete sequences Length = 135513 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ttgtccatgttgtcacaaac 325 |||||||||||||||||||| Sbjct: 53181 ttgtccatgttgtcacaaac 53200
>emb|AL929153.11| Mouse DNA sequence from clone RP23-55C8 on chromosome 2, complete sequence Length = 116887 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 aacaacattaaaaaatttaaaaat 62 ||||||| |||||||||||||||| Sbjct: 27548 aacaacaataaaaaatttaaaaat 27571
>emb|AL928619.6| Zebrafish DNA sequence from clone CH211-63I20, complete sequence Length = 158847 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aatttaaaaattgtggtgta 71 |||||||||||||||||||| Sbjct: 113622 aatttaaaaattgtggtgta 113641
>emb|BX248523.8| Zebrafish DNA sequence from clone CH211-257G8 in linkage group 20, complete sequence Length = 169849 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aaacaacattaaaaaattta 57 |||||||||||||||||||| Sbjct: 150165 aaacaacattaaaaaattta 150184
>dbj|AP001077.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-767P20, complete sequence Length = 199652 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caacattaaaaaatttaaaa 60 |||||||||||||||||||| Sbjct: 17587 caacattaaaaaatttaaaa 17606
>dbj|AP005482.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-973H7, complete sequence Length = 170560 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caacattaaaaaatttaaaa 60 |||||||||||||||||||| Sbjct: 67080 caacattaaaaaatttaaaa 67099
>gb|AY787816.1| Perga condei mitochondrion, partial genome Length = 13416 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 acaacattaaaaaatttaaa 59 |||||||||||||||||||| Sbjct: 10287 acaacattaaaaaatttaaa 10306
>gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome II, complete sequence Length = 350181 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cattaaaaaatttaaaaatt 63 |||||||||||||||||||| Sbjct: 229594 cattaaaaaatttaaaaatt 229575
>emb|BX323863.6| Mouse DNA sequence from clone RP24-353A18 on chromosome 4, complete sequence Length = 55311 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 39883 aacattaaaaaatttaaaaa 39902
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cattaaaaaatttaaaaatt 63 |||||||||||||||||||| Sbjct: 120478 cattaaaaaatttaaaaatt 120459
>emb|CT025641.10| Mouse DNA sequence from clone RP24-322A17 on chromosome 17, complete sequence Length = 122522 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 acaacattaaaaaatttaaa 59 |||||||||||||||||||| Sbjct: 30501 acaacattaaaaaatttaaa 30482
>gb|AC005952.2| Homo sapiens chromosome 19, cosmid F19847, complete sequence Length = 15976 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 aaacaacattaaaaaatttaaaaa 61 |||||| ||||||||||||||||| Sbjct: 345 aaacaaaattaaaaaatttaaaaa 368
>gb|AC169668.1| Mus musculus chromosome 1, clone RP23-317J12, complete sequence Length = 224712 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 90600 aacattaaaaaatttaaaaa 90619
>emb|AL928843.9| Zebrafish DNA sequence from clone DKEY-7P8 in linkage group 7, complete sequence Length = 179577 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaaaatttaaaaattgtggt 68 |||||||||||||||||||| Sbjct: 67204 aaaaatttaaaaattgtggt 67185
>emb|AL935040.6| Zebrafish DNA sequence from clone CH211-176L21, complete sequence Length = 159468 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 110272 aacattaaaaaatttaaaaa 110291
>emb|X99078.1|ONDNAATPA Ochrosphaera neapolitana plastid atpA gene cluster Length = 4396 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aacaacattaaaaaatttaa 58 |||||||||||||||||||| Sbjct: 2711 aacaacattaaaaaatttaa 2692
>emb|AL844500.1|CNS08CAS Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 85K17 of library RPCI-23 from chromosome 11 of strain C57Bl/6 of Mus musculus (mouse) Length = 234746 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aacattaaaaaatttaaaaa 61 |||||||||||||||||||| Sbjct: 20472 aacattaaaaaatttaaaaa 20491
>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ccttggccatagaaatcatgccca 191 |||||||||| ||||||||||||| Sbjct: 862 ccttggccattgaaatcatgccca 839
>gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3p, complete sequence Length = 179814 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 aagattgttgaacagaaaat 157 |||||||||||||||||||| Sbjct: 3697 aagattgttgaacagaaaat 3716
>dbj|AP003534.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1554H10 Length = 194091 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 24406 ttaaaaaatttaaaaattgt 24387
>dbj|AP003478.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1247B1 Length = 153894 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ttaaaaaatttaaaaattgt 65 |||||||||||||||||||| Sbjct: 144123 ttaaaaaatttaaaaattgt 144104 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,600,057 Number of Sequences: 3902068 Number of extensions: 6600057 Number of successful extensions: 197437 Number of sequences better than 10.0: 147 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 196543 Number of HSP's gapped (non-prelim): 878 length of query: 631 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 608 effective length of database: 17,143,297,704 effective search space: 10423125004032 effective search space used: 10423125004032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
