ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags21h06 |
|---|---|
| Clone Library Name | barley_pub |
>GUAA_RALEJ (Q470G4) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 539 Score = 34.3 bits (77), Expect = 0.31 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +1 Query: 397 WSFLKLRAFSASPILSSLRMLSPA----WMSLWKSHNAQTTALPPRERILTISSTSPIAN 564 + + ++RA +P+L + S A + +W SH + ALPP +++ + + PIA Sbjct: 103 FGYAEVRAHGHTPLLKDIEDFSTAEGHGMLKVWMSHGDKVAALPPGFKLMASTPSCPIAG 162 Query: 565 L 567 + Sbjct: 163 M 163
>GUAAA_PYRHO (O59071) GMP synthase [glutamine-hydrolyzing] subunit A (EC| 6.3.5.2) (Glutamine amidotransferase) Length = 189 Score = 33.9 bits (76), Expect = 0.40 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +1 Query: 391 AAWSFLKLRAFSASPILSSLRMLSPAWMSLWKSHNAQTTALPPRERILTISSTSPIANLK 570 A +S +++ I L P + +W+SH + LPP+ +IL S T PI +K Sbjct: 99 AEYSLVEIEIIDEDEIFKGL----PKRLKVWESHMDEVKELPPKFKILARSETCPIEAMK 154
>GUAA_LEGPL (Q5WVX4) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 525 Score = 33.1 bits (74), Expect = 0.69 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +1 Query: 397 WSFLKLRAFSASPILSSLR----MLSPAWMSLWKSHNAQTTALPPRERILTISSTSPIAN 564 + + +LR S +LS++ M A + +W SH + T LPP +++ + +PIA Sbjct: 107 FGYAELRLHGHSQLLSNIEDRTAMDGSALLDVWMSHGDKVTELPPGFKVICETRNAPIAG 166 Query: 565 L 567 + Sbjct: 167 M 167
>GUAA_LEGPA (Q5X4I9) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 525 Score = 33.1 bits (74), Expect = 0.69 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +1 Query: 397 WSFLKLRAFSASPILSSLR----MLSPAWMSLWKSHNAQTTALPPRERILTISSTSPIAN 564 + + +LR S +LS++ M A + +W SH + T LPP +++ + +PIA Sbjct: 107 FGYAELRLHGHSQLLSNIEDRTAMDGSALLDVWMSHGDKVTELPPGFKVICETRNAPIAG 166 Query: 565 L 567 + Sbjct: 167 M 167
>GUAAA_PYRFU (Q8U0R9) GMP synthase [glutamine-hydrolyzing] subunit A (EC| 6.3.5.2) (Glutamine amidotransferase) Length = 188 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/60 (26%), Positives = 30/60 (50%) Frame = +1 Query: 391 AAWSFLKLRAFSASPILSSLRMLSPAWMSLWKSHNAQTTALPPRERILTISSTSPIANLK 570 A +S +++ + I L P + +W+SH + LPP+ ++L S T P+ +K Sbjct: 98 AEYSLVEIEIIDENDIFKGL----PRKVRVWESHMDEVKKLPPKFKLLARSDTCPVEAMK 153
>GUAAA_PYRAB (Q9V0I6) GMP synthase [glutamine-hydrolyzing] subunit A (EC| 6.3.5.2) (Glutamine amidotransferase) Length = 188 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = +1 Query: 391 AAWSFLKLRAFSASPILSSLRMLSPAWMSLWKSHNAQTTALPPRERILTISSTSPIANLK 570 A +S +++ I L P + +W+SH + LPP ++L S T PI +K Sbjct: 98 AEYSLVEIEILEEDEIFKGL----PRKLRVWESHMDEVKELPPNFKVLARSETCPIEAMK 153
>GUAA_LEGPH (Q5ZUS0) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 525 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Frame = +1 Query: 397 WSFLKLRAFSASPILSSL--RMLSP--AWMSLWKSHNAQTTALPPRERILTISSTSPIAN 564 + + +LR S +L+++ R+L+ A + +W SH + T LPP +I+ + +PIA Sbjct: 107 FGYAELRLHGHSQLLNNIEDRILADGSALLDVWMSHGDKVTELPPGFKIICETRNAPIAG 166 Query: 565 L 567 + Sbjct: 167 M 167
>PUR91_YEAST (P54113) Bifunctional purine biosynthesis protein ADE16 [Includes:| Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP synthetase) (ATIC)] Length = 591 Score = 31.2 bits (69), Expect = 2.6 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 26/149 (17%) Frame = -3 Query: 590 VYRHTGGFRFAIGLVDDIVRILSLGGNAVVCALCDF----------------------HR 477 VY TG A GLV++ VRIL+ GG A + F H Sbjct: 12 VYDKTGLLDLAKGLVENNVRILASGGTANMVREAGFPVDDVSSITHAPEMLGGRVKTLHP 71 Query: 476 LIQAGESILKEDKMGEAEKARSFKKLHAAGRKLFFMTCWAHEQPSEVWP---SLARIVEV 306 + AG IL + G+ + K+ H K+ F+ C ++P ++A+I Sbjct: 72 AVHAG--ILARNLEGD---EKDLKEQHI--DKVDFVVC-------NLYPFKETVAKIGVT 117 Query: 305 QKAALEELD-GGSGLRKAGRKNNPQSKVL 222 + A+EE+D GG L +A KN+ + +L Sbjct: 118 VQEAVEEIDIGGVTLLRAAAKNHSRVTIL 146
>GUAA_SYNEL (Q8DGA5) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 535 Score = 31.2 bits (69), Expect = 2.6 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 478 LWKSHNAQTTALPPRERILTISSTSPIANLKPP 576 +W SH T LPP R+L + +PIA + P Sbjct: 143 MWMSHGDSVTELPPGFRVLAHTDNTPIAAIAHP 175
>GUAA_AZOSE (Q5NYE5) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 521 Score = 31.2 bits (69), Expect = 2.6 Identities = 11/36 (30%), Positives = 21/36 (58%) Frame = +1 Query: 472 MSLWKSHNAQTTALPPRERILTISSTSPIANLKPPV 579 + +W SH + TALPP +++ + + P+A + V Sbjct: 133 LDVWMSHGDKVTALPPGFKVIASNESCPVAGMADEV 168
>VHSJ_LAMBD (P03749) Host specificity protein J| Length = 1132 Score = 31.2 bits (69), Expect = 2.6 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 6/43 (13%) Frame = +2 Query: 257 PSSVRFHRPAPQELLSAPQRCEPT------TATPHLAAHEPSM 367 P+SV F AP +AP R E T TATPHLA ++P++ Sbjct: 704 PASVSFRIAAP----AAPSRIELTPGYFQITATPHLAVYDPTV 742
>GUAAA_PYRKO (Q5JFM4) GMP synthase [glutamine-hydrolyzing] subunit A (EC| 6.3.5.2) (Glutamine amidotransferase) Length = 188 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = +1 Query: 391 AAWSFLKLRAFSASPILSSLRMLSPAWMSLWKSHNAQTTALPPRERILTISSTSPIANLK 570 A +S +++ + I L P + +W+SH + LPP ++L S T P+ +K Sbjct: 98 AEYSLVEIEILDENDIFRGL----PRKLRVWESHMDEVKELPPGFKLLARSETCPVEAMK 153
>SYV_PROMM (Q7TUI9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 929 Score = 30.0 bits (66), Expect = 5.8 Identities = 24/77 (31%), Positives = 34/77 (44%) Frame = -3 Query: 572 GFRFAIGLVDDIVRILSLGGNAVVCALCDFHRLIQAGESILKEDKMGEAEKARSFKKLHA 393 G F L+D IVR L G V+C H I A ++IL++ EA + Sbjct: 68 GHAFNTALIDTIVRFQRLQGKNVLCLPGTDHASI-AVQTILEKQLKAEAISR------YD 120 Query: 392 AGRKLFFMTCWAHEQPS 342 GR+ F WA ++ S Sbjct: 121 LGREAFLERAWAWKEES 137
>PIWL2_MOUSE (Q8CDG1) Piwi-like protein 2| Length = 971 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -1 Query: 490 VTSTGSSKLARASSRKTKWVRQKRRGASKSSMPPVGSCSS 371 V + G SKLA AS W R RG+S+ S+ P+G +S Sbjct: 123 VLAAGDSKLAEAS---VGWSRMLGRGSSEVSLLPLGRAAS 159
>MMP15_MOUSE (O54732) Matrix metalloproteinase-15 precursor (EC 3.4.24.-)| (MMP-15) (Membrane-type matrix metalloproteinase 2) (MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix metalloproteinase) (MT2-MMP) (MT2MMP) Length = 657 Score = 29.6 bits (65), Expect = 7.6 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -3 Query: 374 FMTCWAHEQPSEVWPSLAR-IVEVQKAALEELDGGSGLRKAGRKNNPQSKVL-IEEV 210 FM C H +P WP +AR A E DG S AG K+ V+ +EEV Sbjct: 552 FMGCQEHVEPRSRWPDVARPPFNPNGGAEPEADGDSKEENAGDKDEGSRVVVQMEEV 608
>GUAA_METCA (Q60C21) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 524 Score = 29.6 bits (65), Expect = 7.6 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = +1 Query: 472 MSLWKSHNAQTTALPPRERILTISSTSPIANL 567 + +W SH Q LPP +++ + ++PIA + Sbjct: 136 LDVWMSHGDQVVGLPPGFKLIASTESAPIAGM 167
>SYV_PROMT (Q46IA7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 933 Score = 29.6 bits (65), Expect = 7.6 Identities = 23/77 (29%), Positives = 32/77 (41%) Frame = -3 Query: 572 GFRFAIGLVDDIVRILSLGGNAVVCALCDFHRLIQAGESILKEDKMGEAEKARSFKKLHA 393 G F L+D +VR L GN V+C H I A ++IL+ E + R Sbjct: 66 GHAFNTALIDTVVRYKRLKGNNVLCLPGTDHASI-AVQTILERQLKEEGKNRRDL----- 119 Query: 392 AGRKLFFMTCWAHEQPS 342 GR F W ++ S Sbjct: 120 -GRASFLEKAWEWKEKS 135
>GUAA_OCEIH (Q8CXK8) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 511 Score = 29.6 bits (65), Expect = 7.6 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 460 SPAWMSLWKSHNAQTTALPPRERILTISSTSPIA 561 +P ++W SH + TA PP I S ++PIA Sbjct: 122 TPKGQTVWMSHGDKVTAAPPSFNIDATSPSTPIA 155
>GUAA_BORPE (Q7VVM4) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 530 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = +1 Query: 397 WSFLKLRAFSASPILSSLRMLSP----AWMSLWKSHNAQTTALPPRERILTISSTSPIAN 564 + + ++RA + +L L + + +W SH + T LPP +++ +++ PIA Sbjct: 106 FGYAEVRAHGHTKLLDGLADFTTDEGHGMLKVWMSHGDKVTELPPGFKLMASTASCPIAG 165 Query: 565 L 567 + Sbjct: 166 M 166
>GUAA_BORPA (Q7WAV6) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 530 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = +1 Query: 397 WSFLKLRAFSASPILSSLRMLSP----AWMSLWKSHNAQTTALPPRERILTISSTSPIAN 564 + + ++RA + +L L + + +W SH + T LPP +++ +++ PIA Sbjct: 106 FGYAEVRAHGHTKLLDGLADFTTDEGHGMLKVWMSHGDKVTELPPGFKLMASTASCPIAG 165 Query: 565 L 567 + Sbjct: 166 M 166
>GUAA_BORBR (Q7WK13) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 530 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = +1 Query: 397 WSFLKLRAFSASPILSSLRMLSP----AWMSLWKSHNAQTTALPPRERILTISSTSPIAN 564 + + ++RA + +L L + + +W SH + T LPP +++ +++ PIA Sbjct: 106 FGYAEVRAHGHTKLLDGLADFTTDEGHGMLKVWMSHGDKVTELPPGFKLMASTASCPIAG 165 Query: 565 L 567 + Sbjct: 166 M 166
>KAD_NEUCR (Q9HE76) Probable adenylate kinase (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 236 Score = 29.3 bits (64), Expect = 10.0 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 19/114 (16%) Frame = -3 Query: 548 VDDIVRILSLGGNAVVCALC-DFHRLIQAGESILKEDKMGEAEKARSFKKLHAAGRKL-- 378 +DD + + + G V A +HR+ + +K+D GE RS A ++L Sbjct: 114 IDDSLLVARITGRLVHPASGRSYHRIFNPPKDDMKDDITGEPLVQRSDDNAEALRKRLET 173 Query: 377 ----------------FFMTCWAHEQPSEVWPSLARIVEVQKAALEELDGGSGL 264 + A ++P++VW SL I E KA + GSG+ Sbjct: 174 YHKQTAPVVGYYQNTGIWKAIDASQEPAQVWKSLLAIFEGDKA--KASSAGSGI 225 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,321,337 Number of Sequences: 219361 Number of extensions: 1926253 Number of successful extensions: 6000 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 5843 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5997 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
