ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X98244.2|ZMANNP33 Z.mays mRNA for annexin p33 244 2e-61
2gb|AY105151.1| Zea mays PCO072293 mRNA sequence 244 2e-61
3dbj|AK072559.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
5dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
6emb|X98245.1|ZMANNP35 Z.mays mRNA for annexin p35 98 4e-17
7gb|AY105105.1| Zea mays PCO122403 mRNA sequence 98 4e-17
8gb|AF542967.1| Triticum aestivum annexin P35-like mRNA, partial ... 96 1e-16
9ref|XM_467846.1| Oryza sativa (japonica cultivar-group), mRNA 88 3e-14
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
11dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
12dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
13dbj|AK101787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
14gb|AF006197.1| Lavatera thuringiaca annexin (AnxLt1) mRNA, compl... 56 1e-04
15gb|U73746.2|GHU73746 Gossypium hirsutum annexin (AnnGh1) mRNA, p... 48 0.030
16gb|AC016705.4|AC016705 Homo sapiens BAC clone RP11-210M15 from 1... 44 0.47
17dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.8
18gb|AC102632.8| Mus musculus chromosome 5, clone RP23-286C5, comp... 42 1.8
19gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 1.8
20gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome... 40 7.3
21gb|AF186998.5| Homo sapiens chromosome 8 clone CTB-878E2 map q21... 40 7.3
22gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, co... 40 7.3
23gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosom... 40 7.3
24gb|AC103770.5| Homo sapiens chromosome 8, clone RP11-122A3, comp... 40 7.3
25ref|XM_815175.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.3
26gb|AC073068.8| Homo sapiens BAC clone RP11-159I18 from 7, comple... 40 7.3
27emb|CR381695.4| Zebrafish DNA sequence from clone CH211-265I20 i... 40 7.3
28emb|BX511003.9| Zebrafish DNA sequence from clone CH211-69F16 in... 40 7.3
29emb|BX855591.11| Zebrafish DNA sequence from clone DKEY-237H21 i... 40 7.3
30dbj|AK037541.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 7.3
31emb|BX465203.6| Zebrafish DNA sequence from clone CH211-221F10 i... 40 7.3
32emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chr... 40 7.3
33gb|U89609.1|GHU89609 Gossypium hirsutum fiber annexin mRNA, comp... 40 7.3
34emb|AL928611.9| Mouse DNA sequence from clone RP23-263O5 on chro... 40 7.3
35gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, comple... 40 7.3
36dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC c... 40 7.3 
>emb|X98244.2|ZMANNP33 Z.mays mRNA for annexin p33
          Length = 1277

 Score =  244 bits (123), Expect = 2e-61
 Identities = 252/295 (85%)
 Strand = Plus / Minus

                                                                        
Query: 241  tcactccttccccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgc 300
            |||||||| ||||||||| || ||||||||| |||||||||||||||||||||| || ||
Sbjct: 1029 tcactcctgccccaggagcgcgaggagcatgctctcgtagtcgccggaggtgtcccccgc 970

                                                                        
Query: 301  gacggccttctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcag 360
            |||||||  |||||  || || ||||||||||||||||| ||||| || ||||| || ||
Sbjct: 969  gacggcccgctccagcggcacgctgttcctcttctggtacgcctccttaatcagtttgag 910

                                                                        
Query: 361  gtccacctcggcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccc 420
            ||||||||| |||||||| || |||||||| || |||||||||||||| || ||   |||
Sbjct: 909  gtccacctcagcgcgggtggtgatgaccctggtcagggagttctcatctgtgcctagccc 850

                                                                        
Query: 421  tgcaatggccaacctggcaaccttctcaaagtacctatcagggcaggtgaagcaccggat 480
             || ||||||  ||| || ||||||||||||||||| ||||||||  |||||||||||||
Sbjct: 849  cgctatggcctgcctagccaccttctcaaagtacctgtcagggcaactgaagcaccggat 790

                                                                   
Query: 481  aaccgcccgcagggttttgaggaactcatccttggggtcagccttcagatccttg 535
             | ||||||||| ||| ||||| |||| |||| ||||||||||||||||||||||
Sbjct: 789  gatcgcccgcagcgttctgaggtactcgtcctgggggtcagccttcagatccttg 735
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>gb|AY105151.1| Zea mays PCO072293 mRNA sequence
          Length = 1369

 Score =  244 bits (123), Expect = 2e-61
 Identities = 252/295 (85%)
 Strand = Plus / Minus

                                                                        
Query: 241  tcactccttccccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgc 300
            |||||||| ||||||||| || ||||||||| |||||||||||||||||||||| || ||
Sbjct: 1046 tcactcctgccccaggagcgcgaggagcatgctctcgtagtcgccggaggtgtcccccgc 987

                                                                        
Query: 301  gacggccttctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcag 360
            |||||||  |||||  || || ||||||||||||||||| ||||| || ||||| || ||
Sbjct: 986  gacggcccgctccagcggcacgctgttcctcttctggtacgcctccttaatcagtttgag 927

                                                                        
Query: 361  gtccacctcggcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccc 420
            ||||||||| |||||||| || |||||||| || |||||||||||||| || ||   |||
Sbjct: 926  gtccacctcagcgcgggtggtgatgaccctggtcagggagttctcatctgtgcctagccc 867

                                                                        
Query: 421  tgcaatggccaacctggcaaccttctcaaagtacctatcagggcaggtgaagcaccggat 480
             || ||||||  ||| || ||||||||||||||||| ||||||||  |||||||||||||
Sbjct: 866  cgctatggcctgcctagccaccttctcaaagtacctgtcagggcaactgaagcaccggat 807

                                                                   
Query: 481  aaccgcccgcagggttttgaggaactcatccttggggtcagccttcagatccttg 535
             | ||||||||| ||| ||||| |||| |||| ||||||||||||||||||||||
Sbjct: 806  gatcgcccgcagcgttctgaggtactcgtcctgggggtcagccttcagatccttg 752
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>dbj|AK072559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A10, full
            insert sequence
          Length = 1274

 Score =  168 bits (85), Expect = 1e-38
 Identities = 235/285 (82%)
 Strand = Plus / Minus

                                                                        
Query: 251  cccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgcgacggccttc 310
            ||||| || ||||| |||||  |||||||||| ||||||||||| |||||||| ||   |
Sbjct: 1036 cccagaagagcaagaagcatcctctcgtagtccccggaggtgtcccctgcgaccgcacgc 977

                                                                        
Query: 311  tccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcg 370
            ||||  ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||
Sbjct: 976  tccagcgggacactgttcctcttctggtacgcctccgtgatcagcttcagatccacctcg 917

                                                                        
Query: 371  gcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccctgcaatggcc 430
            || || || || |||| |||||||||||||||||| || |||||  | ||||| ||||||
Sbjct: 916  gcacgagtggtaatgatcctagtgagggagttctcgtctgttcccatgcctgcgatggcc 857

                                                                        
Query: 431  aacctggcaaccttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgc 490
            ||||||   || ||||| |||||||| ||||||||   |||||| ||||| |  || |||
Sbjct: 856  aacctgatgactttctcgaagtacctgtcagggcaacagaagcagcggatgattgcacgc 797

                                                         
Query: 491  agggttttgaggaactcatccttggggtcagccttcagatccttg 535
            || ||    |||||||| |||||||| |||||||| |||||||||
Sbjct: 796  agcgtggaaaggaactcgtccttgggatcagccttgagatccttg 752
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  165 bits (83), Expect = 2e-37
 Identities = 233/283 (82%)
 Strand = Plus / Minus

                                                                           
Query: 251     cccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgcgacggccttc 310
               ||||| || ||||| |||||  |||||||||| ||||||||||| |||||||| ||   |
Sbjct: 6264287 cccagaagagcaagaagcatcctctcgtagtccccggaggtgtcccctgcgaccgcacgc 6264228

                                                                           
Query: 311     tccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcg 370
               ||||  ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||
Sbjct: 6264227 tccagcgggacactgttcctcttctggtacgcctccgtgatcagcttcagatccacctcg 6264168

                                                                           
Query: 371     gcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccctgcaatggcc 430
               || || || || |||| |||||||||||||||||| || |||||  | ||||| ||||||
Sbjct: 6264167 gcacgagtggtaatgatcctagtgagggagttctcgtctgttcccatgcctgcgatggcc 6264108

                                                                           
Query: 431     aacctggcaaccttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgc 490
               ||||||   || ||||| |||||||| ||||||||   |||||| ||||| |  || |||
Sbjct: 6264107 aacctgatgactttctcgaagtacctgtcagggcaacagaagcagcggatgattgcacgc 6264048

                                                          
Query: 491     agggttttgaggaactcatccttggggtcagccttcagatcct 533
               || ||    |||||||| |||||||| |||||||| |||||||
Sbjct: 6264047 agcgtggaaaggaactcgtccttgggatcagccttgagatcct 6264005
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>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0516A04
          Length = 145107

 Score =  165 bits (83), Expect = 2e-37
 Identities = 233/283 (82%)
 Strand = Plus / Minus

                                                                         
Query: 251   cccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgcgacggccttc 310
             ||||| || ||||| |||||  |||||||||| ||||||||||| |||||||| ||   |
Sbjct: 58363 cccagaagagcaagaagcatcctctcgtagtccccggaggtgtcccctgcgaccgcacgc 58304

                                                                         
Query: 311   tccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcg 370
             ||||  ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||
Sbjct: 58303 tccagcgggacactgttcctcttctggtacgcctccgtgatcagcttcagatccacctcg 58244

                                                                         
Query: 371   gcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccctgcaatggcc 430
             || || || || |||| |||||||||||||||||| || |||||  | ||||| ||||||
Sbjct: 58243 gcacgagtggtaatgatcctagtgagggagttctcgtctgttcccatgcctgcgatggcc 58184

                                                                         
Query: 431   aacctggcaaccttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgc 490
             ||||||   || ||||| |||||||| ||||||||   |||||| ||||| |  || |||
Sbjct: 58183 aacctgatgactttctcgaagtacctgtcagggcaacagaagcagcggatgattgcacgc 58124

                                                        
Query: 491   agggttttgaggaactcatccttggggtcagccttcagatcct 533
             || ||    |||||||| |||||||| |||||||| |||||||
Sbjct: 58123 agcgtggaaaggaactcgtccttgggatcagccttgagatcct 58081
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>emb|X98245.1|ZMANNP35 Z.mays mRNA for annexin p35
          Length = 1257

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                       
Query: 443 ttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgcagggttttgagg 502
           ||||| ||||| || ||||||||||||||||||||||| | ||||||||| |||   || 
Sbjct: 874 ttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcccgcagtgttgaaaga 815

                                            
Query: 503 aactcatccttggggtcagccttcagatccttg 535
           |||||||||||||||||||| ||||||||||||
Sbjct: 814 aactcatccttggggtcagctttcagatccttg 782



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 320 acactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcggcgcgggtc 379
           |||||||| |||||||| || ||||| || |||||||||||||| ||||||||||| || 
Sbjct: 997 acactgtttctcttctgataagcctcctttatcagcttcaggtcgacctcggcgcgagta 938

                             
Query: 380 gttatgaccctagtgagg 397
           |||| |||||| ||||||
Sbjct: 937 gttacgaccctggtgagg 920
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>gb|AY105105.1| Zea mays PCO122403 mRNA sequence
          Length = 1401

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                       
Query: 443 ttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgcagggttttgagg 502
           ||||| ||||| || ||||||||||||||||||||||| | ||||||||| |||   || 
Sbjct: 968 ttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcccgcagtgttgaaaga 909

                                            
Query: 503 aactcatccttggggtcagccttcagatccttg 535
           |||||||||||||||||||| ||||||||||||
Sbjct: 908 aactcatccttggggtcagctttcagatccttg 876



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 320  acactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcggcgcgggtc 379
            |||||||| |||||||| || ||||| || |||||||||||||| ||||||||||| || 
Sbjct: 1091 acactgtttctcttctgataagcctcctttatcagcttcaggtcgacctcggcgcgagta 1032

                              
Query: 380  gttatgaccctagtgagg 397
            |||| |||||| ||||||
Sbjct: 1031 gttacgaccctggtgagg 1014
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>gb|AF542967.1| Triticum aestivum annexin P35-like mRNA, partial sequence
          Length = 766

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 166/204 (81%), Gaps = 1/204 (0%)
 Strand = Plus / Minus

                                                                       
Query: 317 gggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcggcgcgg 376
           ||||| ||||||||||||||||| ||||| || |||| ||||||||||||||||||||| 
Sbjct: 636 gggacgctgttcctcttctggtacgcctcctttatcaccttcaggtccacctcggcgcga 577

                                                                       
Query: 377 gtcgttatgaccctagt-gagggagttctcatcggttccattccctgcaatggccaacct 435
           || ||||||||||| ||  |||| |||||| || || ||    ||| ||| |||||||| 
Sbjct: 576 gtggttatgaccctcgtaaagggtgttctcgtctgtgccgacgcctccaagggccaaccg 517

                                                                       
Query: 436 ggcaaccttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgcagggt 495
           |   | |||||||||||| || |||||||| ||||| ||||  || | ||||| ||||||
Sbjct: 516 gatgatcttctcaaagtatctgtcagggcaagtgaaacaccttatgatcgccctcagggt 457

                                   
Query: 496 tttgaggaactcatccttggggtc 519
           |  ||||||||| | |||||||||
Sbjct: 456 tgagaggaactcgttcttggggtc 433
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>ref|XM_467846.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1223

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                       
Query: 310 ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 369
           |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 991 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 932

                                               
Query: 370 ggcgcgggtcgttatgaccctagtgagggagttctc 405
           ||| || || ||||||| ||| || || ||||||||
Sbjct: 931 ggcacgagttgttatgatccttgtaagagagttctc 896



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 443 ttctcaaagtacctatcagggcaggtgaagca 474
           ||||||||||| || |||||||| ||||||||
Sbjct: 858 ttctcaaagtatctgtcagggcaagtgaagca 827
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                            
Query: 310      ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 369
                |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 31716929 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 31716988

                                                    
Query: 370      ggcgcgggtcgttatgaccctagtgagggagttctc 405
                ||| || || ||||||| ||| || || ||||||||
Sbjct: 31716989 ggcacgagttgttatgatccttgtaagagagttctc 31717024



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 443      ttctcaaagtacctatcagggcaggtgaagca 474
                ||||||||||| || |||||||| ||||||||
Sbjct: 31717062 ttctcaaagtatctgtcagggcaagtgaagca 31717093
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>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0627E03
          Length = 159861

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                         
Query: 310   ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 369
             |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 12727 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 12786

                                                 
Query: 370   ggcgcgggtcgttatgaccctagtgagggagttctc 405
             ||| || || ||||||| ||| || || ||||||||
Sbjct: 12787 ggcacgagttgttatgatccttgtaagagagttctc 12822



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 443   ttctcaaagtacctatcagggcaggtgaagca 474
             ||||||||||| || |||||||| ||||||||
Sbjct: 12860 ttctcaaagtatctgtcagggcaagtgaagca 12891
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>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1288_G09
          Length = 109672

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                         
Query: 310   ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 369
             |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 96716 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 96775

                                                 
Query: 370   ggcgcgggtcgttatgaccctagtgagggagttctc 405
             ||| || || ||||||| ||| || || ||||||||
Sbjct: 96776 ggcacgagttgttatgatccttgtaagagagttctc 96811



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 443   ttctcaaagtacctatcagggcaggtgaagca 474
             ||||||||||| || |||||||| ||||||||
Sbjct: 96849 ttctcaaagtatctgtcagggcaagtgaagca 96880
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>dbj|AK101787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065F07, full
           insert sequence
          Length = 1223

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                       
Query: 310 ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 369
           |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 991 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 932

                                               
Query: 370 ggcgcgggtcgttatgaccctagtgagggagttctc 405
           ||| || || ||||||| ||| || || ||||||||
Sbjct: 931 ggcacgagttgttatgatccttgtaagagagttctc 896



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 443 ttctcaaagtacctatcagggcaggtgaagca 474
           ||||||||||| || |||||||| ||||||||
Sbjct: 858 ttctcaaagtatctgtcagggcaagtgaagca 827
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>gb|AF006197.1| Lavatera thuringiaca annexin (AnxLt1) mRNA, complete cds
          Length = 1112

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 500 aggaactcatccttggggtcagccttcagatccttg 535
           |||||||||||||| |||||||||||||| ||||||
Sbjct: 687 aggaactcatccttagggtcagccttcaggtccttg 652
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>gb|U73746.2|GHU73746 Gossypium hirsutum annexin (AnnGh1) mRNA, partial cds
          Length = 948

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 500 aggaactcatccttggggtcagccttca 527
           |||||||||||||| |||||||||||||
Sbjct: 683 aggaactcatccttagggtcagccttca 656
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>gb|AC016705.4|AC016705 Homo sapiens BAC clone RP11-210M15 from 15, complete sequence
          Length = 177964

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 46     tgaacatctaagctagtacaaa 67
              ||||||||||||||||||||||
Sbjct: 121419 tgaacatctaagctagtacaaa 121440
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 282     cgccggaggtgtcgcctgcgacggc 306
               |||||||||||||||| ||||||||
Sbjct: 4911239 cgccggaggtgtcgcccgcgacggc 4911263
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>gb|AC102632.8| Mus musculus chromosome 5, clone RP23-286C5, complete sequence
          Length = 200020

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    gtaaagcacacctctctctat 113
             |||||||||||||||||||||
Sbjct: 67083 gtaaagcacacctctctctat 67103
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 361    gtccacctcggcgcgggtcgt 381
              |||||||||||||||||||||
Sbjct: 497372 gtccacctcggcgcgggtcgt 497352
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>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence
          Length = 176868

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     agaaaactcacttttttaac 20
             ||||||||||||||||||||
Sbjct: 36980 agaaaactcacttttttaac 36999
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>gb|AF186998.5| Homo sapiens chromosome 8 clone CTB-878E2 map q21.3, complete sequence
          Length = 125222

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 244   ctccttccccaggagggcaaggagcatg 271
             ||||||||||| |||||||||| |||||
Sbjct: 25802 ctccttccccaagagggcaaggggcatg 25829
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>gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, complete sequence
          Length = 168641

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     agaaaactcacttttttaac 20
             ||||||||||||||||||||
Sbjct: 49680 agaaaactcacttttttaac 49661
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>gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosome 8, complete sequence
          Length = 208404

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    cagggtttattctctgattt 197
              ||||||||||||||||||||
Sbjct: 160599 cagggtttattctctgattt 160618
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>gb|AC103770.5| Homo sapiens chromosome 8, clone RP11-122A3, complete sequence
          Length = 176632

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 244    ctccttccccaggagggcaaggagcatg 271
              ||||||||||| |||||||||| |||||
Sbjct: 130824 ctccttccccaagagggcaaggggcatg 130797
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>ref|XM_815175.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508277.80) partial mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 461 gggcaggtgaagcaccggat 480
           ||||||||||||||||||||
Sbjct: 637 gggcaggtgaagcaccggat 656
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>gb|AC073068.8| Homo sapiens BAC clone RP11-159I18 from 7, complete sequence
          Length = 171058

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tttgagatatgaaaaggata 214
             ||||||||||||||||||||
Sbjct: 78955 tttgagatatgaaaaggata 78936
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>emb|CR381695.4| Zebrafish DNA sequence from clone CH211-265I20 in linkage group 14,
            complete sequence
          Length = 81999

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  tgagatatgaaaaggataac 216
            ||||||||||||||||||||
Sbjct: 8517 tgagatatgaaaaggataac 8498
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>emb|BX511003.9| Zebrafish DNA sequence from clone CH211-69F16 in linkage group 1,
             complete sequence
          Length = 151271

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   ttctcaaagtacctatcagg 462
             ||||||||||||||||||||
Sbjct: 90000 ttctcaaagtacctatcagg 89981
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>emb|BX855591.11| Zebrafish DNA sequence from clone DKEY-237H21 in linkage group 1,
             complete sequence
          Length = 131858

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   ttctcaaagtacctatcagg 462
             ||||||||||||||||||||
Sbjct: 64924 ttctcaaagtacctatcagg 64905
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>dbj|AK037541.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130024J05 product:hypothetical protein,
            full insert sequence
          Length = 2807

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  ctctctatcttattctcacc 125
            ||||||||||||||||||||
Sbjct: 1958 ctctctatcttattctcacc 1977
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>emb|BX465203.6| Zebrafish DNA sequence from clone CH211-221F10 in linkage group 14,
              complete sequence
          Length = 150992

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    tgagatatgaaaaggataac 216
              ||||||||||||||||||||
Sbjct: 142477 tgagatatgaaaaggataac 142496
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>emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chromosome 11, complete
             sequence
          Length = 114581

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     agaaaactcacttttttaac 20
             ||||||||||||||||||||
Sbjct: 25466 agaaaactcacttttttaac 25447
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>gb|U89609.1|GHU89609 Gossypium hirsutum fiber annexin mRNA, complete cds
          Length = 1141

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 500 aggaactcatccttggggtcagccttca 527
           |||||||||||||| || ||||||||||
Sbjct: 719 aggaactcatccttaggatcagccttca 692
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>emb|AL928611.9| Mouse DNA sequence from clone RP23-263O5 on chromosome 2, complete
              sequence
          Length = 199317

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ctctctatcttattctcacc 125
              ||||||||||||||||||||
Sbjct: 170111 ctctctatcttattctcacc 170130
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>gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, complete sequence
          Length = 175181

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    cagggtttattctctgattt 197
              ||||||||||||||||||||
Sbjct: 139626 cagggtttattctctgattt 139607
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>dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC clone 521F14, complete
             sequence
          Length = 116160

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   accctagtgagggagttctc 405
             ||||||||||||||||||||
Sbjct: 35355 accctagtgagggagttctc 35374


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,099,511
Number of Sequences: 3902068
Number of extensions: 4099511
Number of successful extensions: 78864
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78676
Number of HSP's gapped (non-prelim): 186
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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