ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21g23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009037.1| Triticum aestivum clone wdk5c.pk0001.d10:fis, ful... 866 0.0
2ref|XM_550320.1| Oryza sativa (japonica cultivar-group), mRNA 258 2e-65
3dbj|AK103230.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 2e-65
4gb|BT019035.1| Zea mays clone Contig552.F mRNA sequence 248 2e-62
5gb|AY105079.1| Zea mays PCO107820 mRNA sequence 248 2e-62
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
7dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
8emb|AL133167.4|CNS01DU1 Human chromosome 14 DNA sequence BAC R-1... 44 0.56
9emb|AL512665.11| Human DNA sequence from clone RP11-88H9 on chro... 42 2.2
10gb|AC121565.4| Mus musculus BAC clone RP23-223J11 from chromosom... 42 2.2
11gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosom... 42 2.2
12gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosom... 40 8.8
13gb|AC122885.4| Mus musculus BAC clone RP23-90H14 from chromosome... 40 8.8
14emb|CR713366.2|CNS0GDDU Tetraodon nigroviridis full-length cDNA 40 8.8
15ref|XM_962063.1| PREDICTED: Tribolium castaneum similar to CG120... 40 8.8
16emb|AL714011.12| Mouse DNA sequence from clone RP23-380O17 on ch... 40 8.8
17gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, co... 40 8.8
18gb|AC154618.2| Mus musculus BAC clone RP23-321M11 from chromosom... 40 8.8
19gb|AC159040.2| Pan troglodytes BAC clone CH251-149A3 from chromo... 40 8.8
20gb|AC154584.3| Mus musculus BAC clone RP23-248M3 from chromosome... 40 8.8
21emb|AL163760.4|CNS01RI7 Human chromosome 14 DNA sequence BAC R-6... 40 8.8
22emb|CR394552.9| Zebrafish DNA sequence from clone DKEYP-109B10 i... 40 8.8
23gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 8.8

>gb|BT009037.1| Triticum aestivum clone wdk5c.pk0001.d10:fis, full insert mRNA
            sequence
          Length = 1200

 Score =  866 bits (437), Expect = 0.0
 Identities = 583/627 (92%), Gaps = 10/627 (1%)
 Strand = Plus / Minus

                                                                        
Query: 18   cacatggtactaagccataaacgtaactgtaagttgccaatgcata--acgtctgaacca 75
            ||||||||||||||| ||||||||||  | ||||||||||||||||  ||||||||||||
Sbjct: 1080 cacatggtactaagc-ataaacgtaaagg-aagttgccaatgcatataacgtctgaacca 1023

                                                                        
Query: 76   acaaagcagtatcccgcatgatcagcctagaaaccagcacgtcaggatgcggcgaaatgg 135
            ||||||| ||||||| | ||||||||||| | ||||||||||||||||| |||||| |||
Sbjct: 1022 acaaagcggtatcccacgtgatcagccta-agaccagcacgtcaggatgtggcgaagtgg 964

                                                                        
Query: 136  tcgcttcaagtcagatttgcaccaagagtccttcgaccatccgccatgctcccggatgat 195
            |||||||||||||||||||||   | |||||||||| ||||||||||||||| |||||||
Sbjct: 963  tcgcttcaagtcagatttgca---atagtccttcgagcatccgccatgctcctggatgat 907

                                                                        
Query: 196  atgtgtgcatgaactatgacttcaaaccttctgctttaactgcttatnctntgaaagaaa 255
            |||  ||||||||||| |||||||   |||||||| ||||||||||| || |||||||||
Sbjct: 906  atgcatgcatgaactacgacttcat--cttctgctctaactgcttatcctctgaaagaaa 849

                                                                        
Query: 256  tagaggtatcccatgtccttgggcaggtcaacagatgcagccaccttattgtcgttgaag 315
            ||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||
Sbjct: 848  tagaggtatcccatgtccttgggcaggtcgaccgatgcagcaaccttattgtcattgaag 789

                                                                        
Query: 316  attgtccacctcccatctttgaggatatgggcgacatagtgcccacagtgtgtagaggtt 375
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788  atcgtccacctcccatctttgaggatatgggcgacatagtgcccacagtgtgtagaggtt 729

                                                                        
Query: 376  cccatgtggctcacaaatgccgtcagcttgtatctgccacttccatctgatatgtgcgag 435
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 728  cccatgtggctcacaaatgccatcagcttgtatctgccacttccatctgatatgtgcgag 669

                                                                        
Query: 436  ttgtcatcttttacagtgcttgttgaagaatcagcagatacagagttagatgcttcaggg 495
            | ||||||||||||| || |||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 668  tcgtcatcttttacattgtttgttgaagagtcagcagatacagagctagatgcttcaggg 609

                                                                        
Query: 496  tggctgaaaacccactccgtggctctctcaatatttccaccanaagctttcaaggccatt 555
            |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 608  tggctgaaaacccactccgtggctctctcaatatttccaccggaagctttcaaggccatt 549

                                                                        
Query: 556  cgggaaacatcttctggaaagccaaaggaaacaagagtttgaagacttgcttcatcaata 615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548  cgggaaacatcttctggaaagccaaaggaaacaagagtttgaagacttgcttcatcaata 489

                                       
Query: 616  gtgtcttctgcangcattgnatnttga 642
            |||||||||||| |||||| || ||||
Sbjct: 488  gtgtcttctgcaggcattggatcttga 462



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>ref|XM_550320.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2910

 Score =  258 bits (130), Expect = 2e-65
 Identities = 301/359 (83%)
 Strand = Plus / Minus

                                                                        
Query: 240  tatnctntgaaagaaatagaggtatcccatgtccttgggcaggtcaacagatgcagccac 299
            ||| || ||||||||||| ||||||||||| |||||||||| ||| ||||| ||||| ||
Sbjct: 2507 tatcctttgaaagaaatacaggtatcccatatccttgggcaagtcgacagaggcagcaac 2448

                                                                        
Query: 300  cttattgtcgttgaagattgtccacctcccatctttgaggatatgggcgacatagtgccc 359
            |||| | || ||||| |||  ||||||||| |||||||||| |||||| || ||||||||
Sbjct: 2447 cttactatcattgaatattacccacctcccgtctttgaggacatgggcaacgtagtgccc 2388

                                                                        
Query: 360  acagtgtgtagaggttcccatgtggctcacaaatgccgtcagcttgtatctgccacttcc 419
            ||| || |||||||| ||||| ||||||||||| ||| |||  |||||||||||||||||
Sbjct: 2387 acaatgggtagaggtgcccatatggctcacaaacgccatcaatttgtatctgccacttcc 2328

                                                                        
Query: 420  atctgatatgtgcgagttgtcatcttttacagtgcttgttgaagaatcagcagatacaga 479
            ||||| |||||| |  |  |||||||  | | |||||||||||||||||| || ||| ||
Sbjct: 2327 atctggtatgtgtgcatcatcatcttccatattgcttgttgaagaatcagtaggtactga 2268

                                                                        
Query: 480  gttagatgcttcagggtggctgaaaacccactccgtggctctctcaatatttccaccana 539
            | || | || ||||||||||| |||| ||| || || |||||||| |||||||||||| |
Sbjct: 2267 gctaaaagcctcagggtggctaaaaatccagtctgttgctctctcgatatttccaccaga 2208

                                                                       
Query: 540  agctttcaaggccattcgggaaacatcttctggaaagccaaaggaaacaagagtttgaa 598
            ||||  ||||||| |||| | |||||||||| |||| || |||||||||||||||||||
Sbjct: 2207 agctgccaaggcctttcgagcaacatcttcttgaaatccgaaggaaacaagagtttgaa 2149



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>dbj|AK103230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123D13, full
            insert sequence
          Length = 2910

 Score =  258 bits (130), Expect = 2e-65
 Identities = 301/359 (83%)
 Strand = Plus / Minus

                                                                        
Query: 240  tatnctntgaaagaaatagaggtatcccatgtccttgggcaggtcaacagatgcagccac 299
            ||| || ||||||||||| ||||||||||| |||||||||| ||| ||||| ||||| ||
Sbjct: 2507 tatcctttgaaagaaatacaggtatcccatatccttgggcaagtcgacagaggcagcaac 2448

                                                                        
Query: 300  cttattgtcgttgaagattgtccacctcccatctttgaggatatgggcgacatagtgccc 359
            |||| | || ||||| |||  ||||||||| |||||||||| |||||| || ||||||||
Sbjct: 2447 cttactatcattgaatattacccacctcccgtctttgaggacatgggcaacgtagtgccc 2388

                                                                        
Query: 360  acagtgtgtagaggttcccatgtggctcacaaatgccgtcagcttgtatctgccacttcc 419
            ||| || |||||||| ||||| ||||||||||| ||| |||  |||||||||||||||||
Sbjct: 2387 acaatgggtagaggtgcccatatggctcacaaacgccatcaatttgtatctgccacttcc 2328

                                                                        
Query: 420  atctgatatgtgcgagttgtcatcttttacagtgcttgttgaagaatcagcagatacaga 479
            ||||| |||||| |  |  |||||||  | | |||||||||||||||||| || ||| ||
Sbjct: 2327 atctggtatgtgtgcatcatcatcttccatattgcttgttgaagaatcagtaggtactga 2268

                                                                        
Query: 480  gttagatgcttcagggtggctgaaaacccactccgtggctctctcaatatttccaccana 539
            | || | || ||||||||||| |||| ||| || || |||||||| |||||||||||| |
Sbjct: 2267 gctaaaagcctcagggtggctaaaaatccagtctgttgctctctcgatatttccaccaga 2208

                                                                       
Query: 540  agctttcaaggccattcgggaaacatcttctggaaagccaaaggaaacaagagtttgaa 598
            ||||  ||||||| |||| | |||||||||| |||| || |||||||||||||||||||
Sbjct: 2207 agctgccaaggcctttcgagcaacatcttcttgaaatccgaaggaaacaagagtttgaa 2149



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>gb|BT019035.1| Zea mays clone Contig552.F mRNA sequence
          Length = 1262

 Score =  248 bits (125), Expect = 2e-62
 Identities = 314/378 (83%)
 Strand = Plus / Minus

                                                                        
Query: 236  tgcttatnctntgaaagaaatagaggtatcccatgtccttgggcaggtcaacagatgcag 295
            |||| || || ||||||||||||||||| ||||| ||||||||||||||||||||| | |
Sbjct: 1034 tgctaatcctctgaaagaaatagaggtagcccatttccttgggcaggtcaacagatactg 975

                                                                        
Query: 296  ccaccttattgtcgttgaagattgtccacctcccatctttgaggatatgggcgacatagt 355
            | |||||  ||||||| ||||||||||||||||| |||||||||| ||| || || ||||
Sbjct: 974  cgaccttgctgtcgttaaagattgtccacctcccgtctttgaggacatgagctacgtagt 915

                                                                        
Query: 356  gcccacagtgtgtagaggttcccatgtggctcacaaatgccgtcagcttgtatctgccac 415
            |||| ||||| |||||||| ||||| |||||||| || ||| ||||||||||||||||||
Sbjct: 914  gcccgcagtgggtagaggtgcccatatggctcacgaacgccatcagcttgtatctgccac 855

                                                                        
Query: 416  ttccatctgatatgtgcgagttgtcatcttttacagtgcttgttgaagaatcagcagata 475
            |||||||||  || |  | ||  ||| | |||||| |||| || ||||||||||||||| 
Sbjct: 854  ttccatctggaatatatgtgtcatcagcatttacattgctagtggaagaatcagcagatg 795

                                                                        
Query: 476  cagagttagatgcttcagggtggctgaaaacccactccgtggctctctcaatatttccac 535
            | ||| |||||||||| ||||||||||||| ||| || || ||| |||| ||||| ||||
Sbjct: 794  ctgaggtagatgcttcggggtggctgaaaatccagtctgtagctttctcgatattaccac 735

                                                                        
Query: 536  canaagctttcaaggccattcgggaaacatcttctggaaagccaaaggaaacaagagttt 595
            || ||||||||| |||| ||  || ||  |||||  | || |||||||| |  |||||||
Sbjct: 734  cagaagctttcagggcctttatggcaatgtcttcctggaatccaaaggagatgagagttt 675

                              
Query: 596  gaagacttgcttcatcaa 613
            ||| ||||||||| ||||
Sbjct: 674  gaacacttgcttcgtcaa 657



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>gb|AY105079.1| Zea mays PCO107820 mRNA sequence
          Length = 2648

 Score =  248 bits (125), Expect = 2e-62
 Identities = 314/378 (83%)
 Strand = Plus / Minus

                                                                        
Query: 236  tgcttatnctntgaaagaaatagaggtatcccatgtccttgggcaggtcaacagatgcag 295
            |||| || || ||||||||||||||||| ||||| ||||||||||||||||||||| | |
Sbjct: 2437 tgctaatcctctgaaagaaatagaggtagcccatttccttgggcaggtcaacagatactg 2378

                                                                        
Query: 296  ccaccttattgtcgttgaagattgtccacctcccatctttgaggatatgggcgacatagt 355
            | |||||  ||||||| ||||||||||||||||| |||||||||| ||| || || ||||
Sbjct: 2377 cgaccttgctgtcgttaaagattgtccacctcccgtctttgaggacatgagctacgtagt 2318

                                                                        
Query: 356  gcccacagtgtgtagaggttcccatgtggctcacaaatgccgtcagcttgtatctgccac 415
            |||| ||||| |||||||| ||||| |||||||| || ||| ||||||||||||||||||
Sbjct: 2317 gcccgcagtgggtagaggtgcccatatggctcacgaacgccatcagcttgtatctgccac 2258

                                                                        
Query: 416  ttccatctgatatgtgcgagttgtcatcttttacagtgcttgttgaagaatcagcagata 475
            |||||||||  || |  | ||  ||| | |||||| |||| || ||||||||||||||| 
Sbjct: 2257 ttccatctggaatatatgtgtcatcagcatttacattgctagtggaagaatcagcagatg 2198

                                                                        
Query: 476  cagagttagatgcttcagggtggctgaaaacccactccgtggctctctcaatatttccac 535
            | ||| |||||||||| ||||||||||||| ||| || || ||| |||| ||||| ||||
Sbjct: 2197 ctgaggtagatgcttcggggtggctgaaaatccagtctgtagctttctcgatattaccac 2138

                                                                        
Query: 536  canaagctttcaaggccattcgggaaacatcttctggaaagccaaaggaaacaagagttt 595
            || ||||||||| |||| ||  || ||  |||||  | || |||||||| |  |||||||
Sbjct: 2137 cagaagctttcagggcctttatggcaatgtcttcctggaatccaaaggagatgagagttt 2078

                              
Query: 596  gaagacttgcttcatcaa 613
            ||| ||||||||| ||||
Sbjct: 2077 gaacacttgcttcgtcaa 2060



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  135 bits (68), Expect = 2e-28
 Identities = 144/170 (84%)
 Strand = Plus / Minus

                                                                           
Query: 240     tatnctntgaaagaaatagaggtatcccatgtccttgggcaggtcaacagatgcagccac 299
               ||| || ||||||||||| ||||||||||| |||||||||| ||| ||||| ||||| ||
Sbjct: 3993995 tatcctttgaaagaaatacaggtatcccatatccttgggcaagtcgacagaggcagcaac 3993936

                                                                           
Query: 300     cttattgtcgttgaagattgtccacctcccatctttgaggatatgggcgacatagtgccc 359
               |||| | || ||||| |||  ||||||||| |||||||||| |||||| || ||||||||
Sbjct: 3993935 cttactatcattgaatattacccacctcccgtctttgaggacatgggcaacgtagtgccc 3993876

                                                                 
Query: 360     acagtgtgtagaggttcccatgtggctcacaaatgccgtcagcttgtatc 409
               ||| || |||||||| ||||| ||||||||||| ||| |||  |||||||
Sbjct: 3993875 acaatgggtagaggtgcccatatggctcacaaacgccatcaatttgtatc 3993826



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 105/128 (82%)
 Strand = Plus / Minus

                                                                           
Query: 409     ctgccacttccatctgatatgtgcgagttgtcatcttttacagtgcttgttgaagaatca 468
               |||||||||||||||| |||||| |  |  |||||||  | | |||||||||||||||||
Sbjct: 3993373 ctgccacttccatctggtatgtgtgcatcatcatcttccatattgcttgttgaagaatca 3993314

                                                                           
Query: 469     gcagatacagagttagatgcttcagggtggctgaaaacccactccgtggctctctcaata 528
               | || ||| ||| || | || ||||||||||| |||| ||| || || |||||||| |||
Sbjct: 3993313 gtaggtactgagctaaaagcctcagggtggctaaaaatccagtctgttgctctctcgata 3993254

                       
Query: 529     tttccacc 536
               ||||||||
Sbjct: 3993253 tttccacc 3993246



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                    
Query: 546     caaggccattcgggaaacatcttctggaaagccaaaggaaacaagagtttgaa 598
               ||||||| |||| | |||||||||| |||| || |||||||||||||||||||
Sbjct: 3993026 caaggcctttcgagcaacatcttcttgaaatccgaaggaaacaagagtttgaa 3992974



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>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0013F10
          Length = 163095

 Score =  135 bits (68), Expect = 2e-28
 Identities = 144/170 (84%)
 Strand = Plus / Minus

                                                                          
Query: 240    tatnctntgaaagaaatagaggtatcccatgtccttgggcaggtcaacagatgcagccac 299
              ||| || ||||||||||| ||||||||||| |||||||||| ||| ||||| ||||| ||
Sbjct: 115899 tatcctttgaaagaaatacaggtatcccatatccttgggcaagtcgacagaggcagcaac 115840

                                                                          
Query: 300    cttattgtcgttgaagattgtccacctcccatctttgaggatatgggcgacatagtgccc 359
              |||| | || ||||| |||  ||||||||| |||||||||| |||||| || ||||||||
Sbjct: 115839 cttactatcattgaatattacccacctcccgtctttgaggacatgggcaacgtagtgccc 115780

                                                                
Query: 360    acagtgtgtagaggttcccatgtggctcacaaatgccgtcagcttgtatc 409
              ||| || |||||||| ||||| ||||||||||| ||| |||  |||||||
Sbjct: 115779 acaatgggtagaggtgcccatatggctcacaaacgccatcaatttgtatc 115730



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 105/128 (82%)
 Strand = Plus / Minus

                                                                          
Query: 409    ctgccacttccatctgatatgtgcgagttgtcatcttttacagtgcttgttgaagaatca 468
              |||||||||||||||| |||||| |  |  |||||||  | | |||||||||||||||||
Sbjct: 115277 ctgccacttccatctggtatgtgtgcatcatcatcttccatattgcttgttgaagaatca 115218

                                                                          
Query: 469    gcagatacagagttagatgcttcagggtggctgaaaacccactccgtggctctctcaata 528
              | || ||| ||| || | || ||||||||||| |||| ||| || || |||||||| |||
Sbjct: 115217 gtaggtactgagctaaaagcctcagggtggctaaaaatccagtctgttgctctctcgata 115158

                      
Query: 529    tttccacc 536
              ||||||||
Sbjct: 115157 tttccacc 115150



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                   
Query: 546    caaggccattcgggaaacatcttctggaaagccaaaggaaacaagagtttgaa 598
              ||||||| |||| | |||||||||| |||| || |||||||||||||||||||
Sbjct: 114930 caaggcctttcgagcaacatcttcttgaaatccgaaggaaacaagagtttgaa 114878



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>emb|AL133167.4|CNS01DU1 Human chromosome 14 DNA sequence BAC R-185P18 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163096

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 321    ccacctcccatctttgaggata 342
              ||||||||||||||||||||||
Sbjct: 135328 ccacctcccatctttgaggata 135349



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>emb|AL512665.11| Human DNA sequence from clone RP11-88H9 on chromosome 1 Contains the 5'
              end of the KCND3 gen for potassium voltage-gated channel
              Shal-related subfamily member 3, two novel genes and two
              CpG islands, complete sequence
          Length = 169599

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 460    gaagaatcagcagatacagagttag 484
              |||||||||| ||||||||||||||
Sbjct: 119926 gaagaatcaggagatacagagttag 119950



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>gb|AC121565.4| Mus musculus BAC clone RP23-223J11 from chromosome 6, complete
            sequence
          Length = 170000

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 559  gaaacatcttctggaaagcca 579
            |||||||||||||||||||||
Sbjct: 1716 gaaacatcttctggaaagcca 1736



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>gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosome 6, complete sequence
          Length = 185966

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 559   gaaacatcttctggaaagcca 579
             |||||||||||||||||||||
Sbjct: 20883 gaaacatcttctggaaagcca 20863



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>gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosome 18, complete sequence
          Length = 190119

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    gtagaggttcccatgtggct 386
              ||||||||||||||||||||
Sbjct: 146899 gtagaggttcccatgtggct 146880



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>gb|AC122885.4| Mus musculus BAC clone RP23-90H14 from chromosome 14, complete sequence
          Length = 186387

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    tgttgaagaatcagcagata 475
              ||||||||||||||||||||
Sbjct: 119865 tgttgaagaatcagcagata 119846



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>emb|CR713366.2|CNS0GDDU Tetraodon nigroviridis full-length cDNA
          Length = 491

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 251 agaaatagaggtatcccatgtccttggg 278
           |||| ||||||||||||||||| |||||
Sbjct: 65  agaagtagaggtatcccatgtctttggg 38



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>ref|XM_962063.1| PREDICTED: Tribolium castaneum similar to CG12082-PA (LOC655510),
            mRNA
          Length = 2385

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 294  agccaccttattgtcgttgaagat 317
            |||||||||||||||||| |||||
Sbjct: 2328 agccaccttattgtcgttaaagat 2305



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>emb|AL714011.12| Mouse DNA sequence from clone RP23-380O17 on chromosome 4 Contains a CpG
              island, complete sequence
          Length = 166093

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 592    gtttgaagacttgcttcatcaatagtgt 619
              ||||||||| |||||||||||| |||||
Sbjct: 146026 gtttgaagatttgcttcatcaaaagtgt 145999



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>gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, complete sequence
          Length = 198295

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    ccatgtccttgggcaggtca 285
              ||||||||||||||||||||
Sbjct: 120698 ccatgtccttgggcaggtca 120679



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>gb|AC154618.2| Mus musculus BAC clone RP23-321M11 from chromosome 14, complete sequence
          Length = 209522

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 456    tgttgaagaatcagcagata 475
              ||||||||||||||||||||
Sbjct: 143082 tgttgaagaatcagcagata 143101



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>gb|AC159040.2| Pan troglodytes BAC clone CH251-149A3 from chromosome unknown, complete
             sequence
          Length = 174983

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aatgcataacgtctgaacca 75
             ||||||||||||||||||||
Sbjct: 62564 aatgcataacgtctgaacca 62583



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>gb|AC154584.3| Mus musculus BAC clone RP23-248M3 from chromosome 13, complete sequence
          Length = 166580

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   cagatacagagttagatgct 489
             ||||||||||||||||||||
Sbjct: 61869 cagatacagagttagatgct 61850



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>emb|AL163760.4|CNS01RI7 Human chromosome 14 DNA sequence BAC R-68I8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174860

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    ccttctgctttaactgctta 241
              ||||||||||||||||||||
Sbjct: 104548 ccttctgctttaactgctta 104529



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>emb|CR394552.9| Zebrafish DNA sequence from clone DKEYP-109B10 in linkage group 25,
             complete sequence
          Length = 196037

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   aaaccagcacgtcaggatgc 125
             ||||||||||||||||||||
Sbjct: 95282 aaaccagcacgtcaggatgc 95263



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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 268     atgtccttgggcaggtcaac 287
               ||||||||||||||||||||
Sbjct: 1541008 atgtccttgggcaggtcaac 1541027


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,158,220
Number of Sequences: 3902068
Number of extensions: 5158220
Number of successful extensions: 87785
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87697
Number of HSP's gapped (non-prelim): 83
length of query: 645
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 622
effective length of database: 17,143,297,704
effective search space: 10663131171888
effective search space used: 10663131171888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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