ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_196817.1| Oryza sativa (japonica cultivar-group) unknown ... 309 7e-81
2gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 309 7e-81
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 309 7e-81
4dbj|AK101916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 7e-81
5dbj|AK102067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 7e-81
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 309 7e-81
7gb|AY110859.1| Zea mays CL41895_1 mRNA sequence 297 3e-77
8emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p1... 58 4e-05
9dbj|AP002451.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 46 0.16
10gb|AC092931.8| Homo sapiens 3 BAC RP11-131O20 (Roswell Park Canc... 44 0.63
11gb|AC093795.3| Homo sapiens BAC clone RP11-299P3 from 4, complet... 44 0.63
12emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in... 42 2.5
13emb|CR847854.12| Zebrafish DNA sequence from clone DKEY-229J6 in... 42 2.5
14gb|AC009411.2| Homo sapiens BAC clone RP11-342D1 from 2, complet... 42 2.5
15gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 42 2.5
16ref|NM_121761.2| Arabidopsis thaliana unknown protein AT5G17550 ... 40 9.8
17gb|AF047656.1| Caenorhabditis elegans cosmid F17E9, complete seq... 40 9.8
18gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Ho... 40 9.8
19gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome ... 40 9.8
20gb|AY149931.1| Arabidopsis thaliana At5g17550/K10A8_30 mRNA, com... 40 9.8
21emb|AL391151.1|ATK10A8 Arabidopsis thaliana DNA chromosome 5, BA... 40 9.8
22gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, comple... 40 9.8
23gb|AF329849.1|AF329849 Agrobacterium tumefaciens plasmid pTiAB2/... 40 9.8
24gb|AF410297.1|AF410297 Arabidopsis thaliana AT5g17550/K10A8_30 m... 40 9.8
25gb|AC027305.4|AC027305 Homo sapiens chromosome 5 clone CTB-184C1... 40 9.8
26emb|BX833106.1|CNS0A0I4 Arabidopsis thaliana Full-length cDNA Co... 40 9.8
27gb|AC016748.3| Homo sapiens BAC clone RP11-494M7 from 2, complet... 40 9.8
28gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, com... 40 9.8
29emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chro... 40 9.8
30emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on ch... 40 9.8
31emb|AL844534.4| Mouse DNA sequence from clone RP23-59M10 on chro... 40 9.8

>ref|NM_196817.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0018F16.3), mRNA
          Length = 2157

 Score =  309 bits (156), Expect = 7e-81
 Identities = 414/500 (82%)
 Strand = Plus / Minus

                                                                        
Query: 217  gcatgtattgacaccatccttgcagtcgcgtgttaggtcattgattgtctccaacttcct 276
            ||||||||||||||||| |||||| || || || || ||| ||| ||||||||| |||||
Sbjct: 1905 gcatgtattgacaccattcttgcaatcacgagtaagatcactgaatgtctccaatttcct 1846

                                                                        
Query: 277  cttccccctgaggaacacctcagtgtcgactgcaaccctcatgtaaccatcgaactccac 336
            ||||||||  ||||||||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 1845 cttcccccgaaggaacacctcagtgtcaactgcaaccctcatgtatccatcgaattcaac 1786

                                                                        
Query: 337  cggtttgccattgttgagctccttagtttcagcataccagtcactattttcatcccaaag 396
             |  || |||||| | |||||||| |||||||  ||||| || || || |||||||| | 
Sbjct: 1785 agcattaccattgctcagctcctttgtttcagtgtaccactcgctgttctcatcccataa 1726

                                                                        
Query: 397  atccttgaaatcatccaggaaacgcgtcttgtacttgttcttcagcgggtcgaagaacga 456
            ||||||||| |||||||||||  | ||    |||||   |||||  ||||| ||||| ||
Sbjct: 1725 atccttgaagtcatccaggaagtgtgttcgatacttacccttcattgggtcaaagaatga 1666

                                                                        
Query: 457  tttatcggactcatcggtagcaatgtacaaataccgtccagcaccaaccttatcattgag 516
            ||||||||  |||| ||| ||||||||||||| ||| |||||||| ||||||||||| ||
Sbjct: 1665 tttatcgggttcattggttgcaatgtacaaatgccggccagcaccgaccttatcattaag 1606

                                                                        
Query: 517  tgtcgtaaggagattttctggcgaggtatctgcatcaaggtttggccaaagctgtgtgtt 576
            ||||||||||||| | ||||| || ||||||  |||||| |||||||| | |||| ||||
Sbjct: 1605 tgtcgtaaggagactatctggagaagtatctctatcaagatttggccacaactgtttgtt 1546

                                                                        
Query: 577  ctgggctttctctcctctcacaacatgcatcgagtcgaaatcccaactcattcgggaggc 636
            |||||||||||| || ||||||||||| |  || || || ||||||  ||| ||||||| 
Sbjct: 1545 ctgggctttctcccccctcacaacatggactgaatcaaagtcccaatccatccgggagga 1486

                                                                        
Query: 637  aatggcagacacaatctccatcaagcggcgcgacttccacaagaaatgccatggccgttt 696
            |||||||||||| ||||||||||| || ||||| |||||||| |||| |||||| || ||
Sbjct: 1485 aatggcagacacgatctccatcaatcgacgcgatttccacaataaataccatgggcgctt 1426

                                
Query: 697  gatcatggcctctgtctcac 716
            |||||  ||||| |||||||
Sbjct: 1425 gatcactgcctccgtctcac 1406



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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
             complete sequence
          Length = 179157

 Score =  309 bits (156), Expect = 7e-81
 Identities = 414/500 (82%)
 Strand = Plus / Minus

                                                                         
Query: 217   gcatgtattgacaccatccttgcagtcgcgtgttaggtcattgattgtctccaacttcct 276
             ||||||||||||||||| |||||| || || || || ||| ||| ||||||||| |||||
Sbjct: 42311 gcatgtattgacaccattcttgcaatcacgagtaagatcactgaatgtctccaatttcct 42252

                                                                         
Query: 277   cttccccctgaggaacacctcagtgtcgactgcaaccctcatgtaaccatcgaactccac 336
             ||||||||  ||||||||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 42251 cttcccccgaaggaacacctcagtgtcaactgcaaccctcatgtatccatcgaattcaac 42192

                                                                         
Query: 337   cggtttgccattgttgagctccttagtttcagcataccagtcactattttcatcccaaag 396
              |  || |||||| | |||||||| |||||||  ||||| || || || |||||||| | 
Sbjct: 42191 agcattaccattgctcagctcctttgtttcagtgtaccactcgctgttctcatcccataa 42132

                                                                         
Query: 397   atccttgaaatcatccaggaaacgcgtcttgtacttgttcttcagcgggtcgaagaacga 456
             ||||||||| |||||||||||  | ||    |||||   |||||  ||||| ||||| ||
Sbjct: 42131 atccttgaagtcatccaggaagtgtgttcgatacttacccttcattgggtcaaagaatga 42072

                                                                         
Query: 457   tttatcggactcatcggtagcaatgtacaaataccgtccagcaccaaccttatcattgag 516
             ||||||||  |||| ||| ||||||||||||| ||| |||||||| ||||||||||| ||
Sbjct: 42071 tttatcgggttcattggttgcaatgtacaaatgccggccagcaccgaccttatcattaag 42012

                                                                         
Query: 517   tgtcgtaaggagattttctggcgaggtatctgcatcaaggtttggccaaagctgtgtgtt 576
             ||||||||||||| | ||||| || ||||||  |||||| |||||||| | |||| ||||
Sbjct: 42011 tgtcgtaaggagactatctggagaagtatctctatcaagatttggccacaactgtttgtt 41952

                                                                         
Query: 577   ctgggctttctctcctctcacaacatgcatcgagtcgaaatcccaactcattcgggaggc 636
             |||||||||||| || ||||||||||| |  || || || ||||||  ||| ||||||| 
Sbjct: 41951 ctgggctttctcccccctcacaacatggactgaatcaaagtcccaatccatccgggagga 41892

                                                                         
Query: 637   aatggcagacacaatctccatcaagcggcgcgacttccacaagaaatgccatggccgttt 696
             |||||||||||| ||||||||||| || ||||| |||||||| |||| |||||| || ||
Sbjct: 41891 aatggcagacacgatctccatcaatcgacgcgatttccacaataaataccatgggcgctt 41832

                                 
Query: 697   gatcatggcctctgtctcac 716
             |||||  ||||| |||||||
Sbjct: 41831 gatcactgcctccgtctcac 41812



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  309 bits (156), Expect = 7e-81
 Identities = 414/500 (82%)
 Strand = Plus / Minus

                                                                            
Query: 217      gcatgtattgacaccatccttgcagtcgcgtgttaggtcattgattgtctccaacttcct 276
                ||||||||||||||||| |||||| || || || || ||| ||| ||||||||| |||||
Sbjct: 16163422 gcatgtattgacaccattcttgcaatcacgagtaagatcactgaatgtctccaatttcct 16163363

                                                                            
Query: 277      cttccccctgaggaacacctcagtgtcgactgcaaccctcatgtaaccatcgaactccac 336
                ||||||||  ||||||||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 16163362 cttcccccgaaggaacacctcagtgtcaactgcaaccctcatgtatccatcgaattcaac 16163303

                                                                            
Query: 337      cggtttgccattgttgagctccttagtttcagcataccagtcactattttcatcccaaag 396
                 |  || |||||| | |||||||| |||||||  ||||| || || || |||||||| | 
Sbjct: 16163302 agcattaccattgctcagctcctttgtttcagtgtaccactcgctgttctcatcccataa 16163243

                                                                            
Query: 397      atccttgaaatcatccaggaaacgcgtcttgtacttgttcttcagcgggtcgaagaacga 456
                ||||||||| |||||||||||  | ||    |||||   |||||  ||||| ||||| ||
Sbjct: 16163242 atccttgaagtcatccaggaagtgtgttcgatacttacccttcattgggtcaaagaatga 16163183

                                                                            
Query: 457      tttatcggactcatcggtagcaatgtacaaataccgtccagcaccaaccttatcattgag 516
                ||||||||  |||| ||| ||||||||||||| ||| |||||||| ||||||||||| ||
Sbjct: 16163182 tttatcgggttcattggttgcaatgtacaaatgccggccagcaccgaccttatcattaag 16163123

                                                                            
Query: 517      tgtcgtaaggagattttctggcgaggtatctgcatcaaggtttggccaaagctgtgtgtt 576
                ||||||||||||| | ||||| || ||||||  |||||| |||||||| | |||| ||||
Sbjct: 16163122 tgtcgtaaggagactatctggagaagtatctctatcaagatttggccacaactgtttgtt 16163063

                                                                            
Query: 577      ctgggctttctctcctctcacaacatgcatcgagtcgaaatcccaactcattcgggaggc 636
                |||||||||||| || ||||||||||| |  || || || ||||||  ||| ||||||| 
Sbjct: 16163062 ctgggctttctcccccctcacaacatggactgaatcaaagtcccaatccatccgggagga 16163003

                                                                            
Query: 637      aatggcagacacaatctccatcaagcggcgcgacttccacaagaaatgccatggccgttt 696
                |||||||||||| ||||||||||| || ||||| |||||||| |||| |||||| || ||
Sbjct: 16163002 aatggcagacacgatctccatcaatcgacgcgatttccacaataaataccatgggcgctt 16162943

                                    
Query: 697      gatcatggcctctgtctcac 716
                |||||  ||||| |||||||
Sbjct: 16162942 gatcactgcctccgtctcac 16162923



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>dbj|AK101916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071I02, full
            insert sequence
          Length = 2290

 Score =  309 bits (156), Expect = 7e-81
 Identities = 414/500 (82%)
 Strand = Plus / Minus

                                                                        
Query: 217  gcatgtattgacaccatccttgcagtcgcgtgttaggtcattgattgtctccaacttcct 276
            ||||||||||||||||| |||||| || || || || ||| ||| ||||||||| |||||
Sbjct: 2008 gcatgtattgacaccattcttgcaatcacgagtaagatcactgaatgtctccaatttcct 1949

                                                                        
Query: 277  cttccccctgaggaacacctcagtgtcgactgcaaccctcatgtaaccatcgaactccac 336
            ||||||||  ||||||||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 1948 cttcccccgaaggaacacctcagtgtcaactgcaaccctcatgtatccatcgaattcaac 1889

                                                                        
Query: 337  cggtttgccattgttgagctccttagtttcagcataccagtcactattttcatcccaaag 396
             |  || |||||| | |||||||| |||||||  ||||| || || || |||||||| | 
Sbjct: 1888 agcattaccattgctcagctcctttgtttcagtgtaccactcgctgttctcatcccataa 1829

                                                                        
Query: 397  atccttgaaatcatccaggaaacgcgtcttgtacttgttcttcagcgggtcgaagaacga 456
            ||||||||| |||||||||||  | ||    |||||   |||||  ||||| ||||| ||
Sbjct: 1828 atccttgaagtcatccaggaagtgtgttcgatacttacccttcattgggtcaaagaatga 1769

                                                                        
Query: 457  tttatcggactcatcggtagcaatgtacaaataccgtccagcaccaaccttatcattgag 516
            ||||||||  |||| ||| ||||||||||||| ||| |||||||| ||||||||||| ||
Sbjct: 1768 tttatcgggttcattggttgcaatgtacaaatgccggccagcaccgaccttatcattaag 1709

                                                                        
Query: 517  tgtcgtaaggagattttctggcgaggtatctgcatcaaggtttggccaaagctgtgtgtt 576
            ||||||||||||| | ||||| || ||||||  |||||| |||||||| | |||| ||||
Sbjct: 1708 tgtcgtaaggagactatctggagaagtatctctatcaagatttggccacaactgtttgtt 1649

                                                                        
Query: 577  ctgggctttctctcctctcacaacatgcatcgagtcgaaatcccaactcattcgggaggc 636
            |||||||||||| || ||||||||||| |  || || || ||||||  ||| ||||||| 
Sbjct: 1648 ctgggctttctcccccctcacaacatggactgaatcaaagtcccaatccatccgggagga 1589

                                                                        
Query: 637  aatggcagacacaatctccatcaagcggcgcgacttccacaagaaatgccatggccgttt 696
            |||||||||||| ||||||||||| || ||||| |||||||| |||| |||||| || ||
Sbjct: 1588 aatggcagacacgatctccatcaatcgacgcgatttccacaataaataccatgggcgctt 1529

                                
Query: 697  gatcatggcctctgtctcac 716
            |||||  ||||| |||||||
Sbjct: 1528 gatcactgcctccgtctcac 1509



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>dbj|AK102067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082F19, full
            insert sequence
          Length = 2230

 Score =  309 bits (156), Expect = 7e-81
 Identities = 414/500 (82%)
 Strand = Plus / Minus

                                                                        
Query: 217  gcatgtattgacaccatccttgcagtcgcgtgttaggtcattgattgtctccaacttcct 276
            ||||||||||||||||| |||||| || || || || ||| ||| ||||||||| |||||
Sbjct: 1948 gcatgtattgacaccattcttgcaatcacgagtaagatcactgaatgtctccaatttcct 1889

                                                                        
Query: 277  cttccccctgaggaacacctcagtgtcgactgcaaccctcatgtaaccatcgaactccac 336
            ||||||||  ||||||||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 1888 cttcccccgaaggaacacctcagtgtcaactgcaaccctcatgtatccatcgaattcaac 1829

                                                                        
Query: 337  cggtttgccattgttgagctccttagtttcagcataccagtcactattttcatcccaaag 396
             |  || |||||| | |||||||| |||||||  ||||| || || || |||||||| | 
Sbjct: 1828 agcattaccattgctcagctcctttgtttcagtgtaccactcgctgttctcatcccataa 1769

                                                                        
Query: 397  atccttgaaatcatccaggaaacgcgtcttgtacttgttcttcagcgggtcgaagaacga 456
            ||||||||| |||||||||||  | ||    |||||   |||||  ||||| ||||| ||
Sbjct: 1768 atccttgaagtcatccaggaagtgtgttcgatacttacccttcattgggtcaaagaatga 1709

                                                                        
Query: 457  tttatcggactcatcggtagcaatgtacaaataccgtccagcaccaaccttatcattgag 516
            ||||||||  |||| ||| ||||||||||||| ||| |||||||| ||||||||||| ||
Sbjct: 1708 tttatcgggttcattggttgcaatgtacaaatgccggccagcaccgaccttatcattaag 1649

                                                                        
Query: 517  tgtcgtaaggagattttctggcgaggtatctgcatcaaggtttggccaaagctgtgtgtt 576
            ||||||||||||| | ||||| || ||||||  |||||| |||||||| | |||| ||||
Sbjct: 1648 tgtcgtaaggagactatctggagaagtatctctatcaagatttggccacaactgtttgtt 1589

                                                                        
Query: 577  ctgggctttctctcctctcacaacatgcatcgagtcgaaatcccaactcattcgggaggc 636
            |||||||||||| || ||||||||||| |  || || || ||||||  ||| ||||||| 
Sbjct: 1588 ctgggctttctcccccctcacaacatggactgaatcaaagtcccaatccatccgggagga 1529

                                                                        
Query: 637  aatggcagacacaatctccatcaagcggcgcgacttccacaagaaatgccatggccgttt 696
            |||||||||||| ||||||||||| || ||||| |||||||| |||| |||||| || ||
Sbjct: 1528 aatggcagacacgatctccatcaatcgacgcgatttccacaataaataccatgggcgctt 1469

                                
Query: 697  gatcatggcctctgtctcac 716
            |||||  ||||| |||||||
Sbjct: 1468 gatcactgcctccgtctcac 1449



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  309 bits (156), Expect = 7e-81
 Identities = 414/500 (82%)
 Strand = Plus / Minus

                                                                            
Query: 217      gcatgtattgacaccatccttgcagtcgcgtgttaggtcattgattgtctccaacttcct 276
                ||||||||||||||||| |||||| || || || || ||| ||| ||||||||| |||||
Sbjct: 16171663 gcatgtattgacaccattcttgcaatcacgagtaagatcactgaatgtctccaatttcct 16171604

                                                                            
Query: 277      cttccccctgaggaacacctcagtgtcgactgcaaccctcatgtaaccatcgaactccac 336
                ||||||||  ||||||||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 16171603 cttcccccgaaggaacacctcagtgtcaactgcaaccctcatgtatccatcgaattcaac 16171544

                                                                            
Query: 337      cggtttgccattgttgagctccttagtttcagcataccagtcactattttcatcccaaag 396
                 |  || |||||| | |||||||| |||||||  ||||| || || || |||||||| | 
Sbjct: 16171543 agcattaccattgctcagctcctttgtttcagtgtaccactcgctgttctcatcccataa 16171484

                                                                            
Query: 397      atccttgaaatcatccaggaaacgcgtcttgtacttgttcttcagcgggtcgaagaacga 456
                ||||||||| |||||||||||  | ||    |||||   |||||  ||||| ||||| ||
Sbjct: 16171483 atccttgaagtcatccaggaagtgtgttcgatacttacccttcattgggtcaaagaatga 16171424

                                                                            
Query: 457      tttatcggactcatcggtagcaatgtacaaataccgtccagcaccaaccttatcattgag 516
                ||||||||  |||| ||| ||||||||||||| ||| |||||||| ||||||||||| ||
Sbjct: 16171423 tttatcgggttcattggttgcaatgtacaaatgccggccagcaccgaccttatcattaag 16171364

                                                                            
Query: 517      tgtcgtaaggagattttctggcgaggtatctgcatcaaggtttggccaaagctgtgtgtt 576
                ||||||||||||| | ||||| || ||||||  |||||| |||||||| | |||| ||||
Sbjct: 16171363 tgtcgtaaggagactatctggagaagtatctctatcaagatttggccacaactgtttgtt 16171304

                                                                            
Query: 577      ctgggctttctctcctctcacaacatgcatcgagtcgaaatcccaactcattcgggaggc 636
                |||||||||||| || ||||||||||| |  || || || ||||||  ||| ||||||| 
Sbjct: 16171303 ctgggctttctcccccctcacaacatggactgaatcaaagtcccaatccatccgggagga 16171244

                                                                            
Query: 637      aatggcagacacaatctccatcaagcggcgcgacttccacaagaaatgccatggccgttt 696
                |||||||||||| ||||||||||| || ||||| |||||||| |||| |||||| || ||
Sbjct: 16171243 aatggcagacacgatctccatcaatcgacgcgatttccacaataaataccatgggcgctt 16171184

                                    
Query: 697      gatcatggcctctgtctcac 716
                |||||  ||||| |||||||
Sbjct: 16171183 gatcactgcctccgtctcac 16171164



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>gb|AY110859.1| Zea mays CL41895_1 mRNA sequence
          Length = 888

 Score =  297 bits (150), Expect = 3e-77
 Identities = 442/541 (81%)
 Strand = Plus / Plus

                                                                       
Query: 176 tcagctcaccttactcaaccaggtattcaggaggaggctgcgcatgtattgacaccatcc 235
           |||||||||||||  | ||||  | ||||||| || |||| ||||||||| || ||||||
Sbjct: 222 tcagctcaccttagcccaccaaatgttcaggaagaagctgagcatgtattcacgccatcc 281

                                                                       
Query: 236 ttgcagtcgcgtgttaggtcattgattgtctccaacttcctcttccccctgaggaacacc 295
           ||||| || ||||| || || |||| ||||||||  | ||||||     | | ||| |||
Sbjct: 282 ttgcaatcacgtgtaagctcgttgaatgtctccacatgcctcttnnnnntcaagaatacc 341

                                                                       
Query: 296 tcagtgtcgactgcaaccctcatgtaaccatcgaactccaccggtttgccattgttgagc 355
           |||||||| ||||||| |||||| || ||||| || || || || |  |||||| | |||
Sbjct: 342 tcagtgtcaactgcaatcctcatatagccatcaaattctactggctgaccattgctcagc 401

                                                                       
Query: 356 tccttagtttcagcataccagtcactattttcatcccaaagatccttgaaatcatccagg 415
           |||||||||||||   |||| |||||||| |||||||| || | |||||||||||| |||
Sbjct: 402 tccttagtttcagtgaaccactcactattctcatcccacaggtacttgaaatcatcaagg 461

                                                                       
Query: 416 aaacgcgtcttgtacttgttcttcagcgggtcgaagaacgatttatcggactcatcggta 475
           ||  | || || ||||| | ||| || ||||  ||||||||||| || |  |||| ||||
Sbjct: 462 aagtgtgttttatacttttccttgagtgggttaaagaacgatttgtcaggttcattggta 521

                                                                       
Query: 476 gcaatgtacaaataccgtccagcaccaaccttatcattgagtgtcgtaaggagattttct 535
           ||||||||||||||||| |||||||||||||||||||| |||| | |||||||| | |||
Sbjct: 522 gcaatgtacaaataccggccagcaccaaccttatcattaagtgccataaggagactgtct 581

                                                                       
Query: 536 ggcgaggtatctgcatcaaggtttggccaaagctgtgtgttctgggctttctctcctctc 595
           || |||||||||   ||||||||||||||||| ||||||||||| |||||||| ||||| 
Sbjct: 582 ggtgaggtatctctgtcaaggtttggccaaagttgtgtgttctgcgctttctcccctctg 641

                                                                       
Query: 596 acaacatgcatcgagtcgaaatcccaactcattcgggaggcaatggcagacacaatctcc 655
           |||||||| | |||||| || |||||  |||| || |||||||||||||| |||||||||
Sbjct: 642 acaacatggaccgagtcaaagtcccagttcatccgtgaggcaatggcagatacaatctcc 701

                                                                       
Query: 656 atcaagcggcgcgacttccacaagaaatgccatggccgtttgatcatggcctctgtctca 715
           |||||||| || || ||||||| |||||||||||| || ||||| ||  |||| ||||||
Sbjct: 702 atcaagcgacgagatttccacaggaaatgccatgggcgcttgattattccctcagtctca 761

            
Query: 716 c 716
           |
Sbjct: 762 c 762



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>emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p15, COMPLETE SEQUENCE
          Length = 111128

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                         
Query: 539   gaggtatctgcatcaaggtttggccaaagctgtgtgttctgggctttctctcctctcaca 598
             ||||||| ||||||||| ||||||||||||| | |||||   || || ||||||||||||
Sbjct: 20763 gaggtatgtgcatcaagatttggccaaagctctttgttcctcgccttttctcctctcaca 20704

                  
Query: 599   acatg 603
             |||||
Sbjct: 20703 acatg 20699



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>dbj|AP002451.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-792P2, complete
             sequence
          Length = 50359

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 259   gattgtctccaacttcctcttcc 281
             |||||||||||||||||||||||
Sbjct: 39280 gattgtctccaacttcctcttcc 39302



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>gb|AC092931.8| Homo sapiens 3 BAC RP11-131O20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152737

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 373   ccagtcactattttcatcccaa 394
             ||||||||||||||||||||||
Sbjct: 94894 ccagtcactattttcatcccaa 94915



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>gb|AC093795.3| Homo sapiens BAC clone RP11-299P3 from 4, complete sequence
          Length = 183917

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 373   ccagtcactattttcatcccaa 394
             ||||||||||||||||||||||
Sbjct: 35054 ccagtcactattttcatcccaa 35033



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>emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in linkage group 8,
           complete sequence
          Length = 153753

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 35  cgtgaatgaattaagtaaact 55
           |||||||||||||||||||||
Sbjct: 691 cgtgaatgaattaagtaaact 671



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>emb|CR847854.12| Zebrafish DNA sequence from clone DKEY-229J6 in linkage group 8, complete
              sequence
          Length = 155365

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     cgtgaatgaattaagtaaact 55
              |||||||||||||||||||||
Sbjct: 149875 cgtgaatgaattaagtaaact 149855



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>gb|AC009411.2| Homo sapiens BAC clone RP11-342D1 from 2, complete sequence
          Length = 170804

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 254    tcattgattgtctccaacttc 274
              |||||||||||||||||||||
Sbjct: 170052 tcattgattgtctccaacttc 170032



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>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 324    catcgaactccaccggtttgc 344
              |||||||||||||||||||||
Sbjct: 383400 catcgaactccaccggtttgc 383380



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>ref|NM_121761.2| Arabidopsis thaliana unknown protein AT5G17550 mRNA, complete cds
          Length = 1044

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 aagatccttgaaatcatcca 413
           ||||||||||||||||||||
Sbjct: 145 aagatccttgaaatcatcca 126



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>gb|AF047656.1| Caenorhabditis elegans cosmid F17E9, complete sequence
          Length = 25543

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   taaactagtgttacttcaaa 69
            ||||||||||||||||||||
Sbjct: 9040 taaactagtgttacttcaaa 9021



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>gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237199

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    atcaaggtttggccaaagct 569
              ||||||||||||||||||||
Sbjct: 208196 atcaaggtttggccaaagct 208177



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>gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome 7, complete sequence
          Length = 221548

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 669   acttccacaagaaatgccat 688
             ||||||||||||||||||||
Sbjct: 61704 acttccacaagaaatgccat 61723



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>gb|AY149931.1| Arabidopsis thaliana At5g17550/K10A8_30 mRNA, complete cds
          Length = 738

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 aagatccttgaaatcatcca 413
           ||||||||||||||||||||
Sbjct: 72  aagatccttgaaatcatcca 53



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>emb|AL391151.1|ATK10A8 Arabidopsis thaliana DNA chromosome 5, BAC clone K10A8 (ESSA project)
          Length = 43387

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   aagatccttgaaatcatcca 413
             ||||||||||||||||||||
Sbjct: 11605 aagatccttgaaatcatcca 11624



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>gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, complete sequence
          Length = 178030

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   tctccaacttcctcttcccc 283
             ||||||||||||||||||||
Sbjct: 33537 tctccaacttcctcttcccc 33518



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>gb|AF329849.1|AF329849 Agrobacterium tumefaciens plasmid pTiAB2/73 vir region, complete
             sequence
          Length = 32495

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 272   ttcctcttccccctgaggaacacc 295
             ||||||||||||| ||||||||||
Sbjct: 25787 ttcctcttcccccagaggaacacc 25764



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>gb|AF410297.1|AF410297 Arabidopsis thaliana AT5g17550/K10A8_30 mRNA, complete cds
          Length = 994

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 aagatccttgaaatcatcca 413
           ||||||||||||||||||||
Sbjct: 145 aagatccttgaaatcatcca 126



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>gb|AC027305.4|AC027305 Homo sapiens chromosome 5 clone CTB-184C17, complete sequence
          Length = 72259

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   tctccaacttcctcttcccc 283
             ||||||||||||||||||||
Sbjct: 67126 tctccaacttcctcttcccc 67145



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>emb|BX833106.1|CNS0A0I4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL34ZD12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1012

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 aagatccttgaaatcatcca 413
           ||||||||||||||||||||
Sbjct: 108 aagatccttgaaatcatcca 89



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>gb|AC016748.3| Homo sapiens BAC clone RP11-494M7 from 2, complete sequence
          Length = 182776

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    tctccaacttcctcttcccc 283
              ||||||||||||||||||||
Sbjct: 158092 tctccaacttcctcttcccc 158111



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>gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, complete sequence
          Length = 226595

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 669  acttccacaagaaatgccat 688
            ||||||||||||||||||||
Sbjct: 5368 acttccacaagaaatgccat 5349



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>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete
             sequence
          Length = 148202

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 141   ttcaaaaacactctatcaagaataataa 168
             |||||| ||| |||||||||||||||||
Sbjct: 17065 ttcaaatacattctatcaagaataataa 17092



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>emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on chromosome 4, complete
             sequence
          Length = 182829

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 574   gttctgggctttctctcctctcac 597
             ||||||||||||||||| ||||||
Sbjct: 18318 gttctgggctttctctcatctcac 18295



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>emb|AL844534.4| Mouse DNA sequence from clone RP23-59M10 on chromosome 2, complete
             sequence
          Length = 107752

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   ggtttgccattgttgagctc 357
             ||||||||||||||||||||
Sbjct: 45761 ggtttgccattgttgagctc 45742


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,878,304
Number of Sequences: 3902068
Number of extensions: 5878304
Number of successful extensions: 114572
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114434
Number of HSP's gapped (non-prelim): 136
length of query: 716
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 693
effective length of database: 17,143,297,704
effective search space: 11880305308872
effective search space used: 11880305308872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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