ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464558.1| Oryza sativa (japonica cultivar-group), mRNA 268 2e-68
2ref|XM_506756.1| PREDICTED Oryza sativa (japonica cultivar-group... 268 2e-68
3dbj|AK073514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
4dbj|AK060003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
5gb|AY109347.1| Zea mays CL10949_1 mRNA sequence 214 2e-52
6ref|XM_466026.1| Oryza sativa (japonica cultivar-group), mRNA 151 3e-33
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
8dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
9dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
10dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
11gb|BT014281.1| Lycopersicon esculentum clone 133514F, mRNA sequence 54 5e-04
12gb|AY105955.1| Zea mays PCO121693 mRNA sequence 48 0.029
13gb|AF288225.1| Salmonella typhimurium resistance against oxidati... 46 0.11
14gb|AE008722.1| Salmonella typhimurium LT2, section 30 of 220 of ... 46 0.11
15emb|X17250.1|STNITRD Salmonella typhimurium gene for nitroreductase 46 0.11
16emb|AL627267.1| Salmonella enterica serovar Typhi (Salmonella ty... 46 0.11
17gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 46 0.11
18gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 46 0.11
19ref|XM_448461.1| Candida glabrata CBS138, CAGL0K05423g partial mRNA 44 0.44
20emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 44 0.44
21ref|XM_426249.1| PREDICTED: Gallus gallus similar to cysteinyl l... 42 1.8
22gb|AC010996.9| Homo sapiens chromosome 10 clone RP11-118J22, com... 42 1.8
23gb|AC151955.2| Populus trichocarpa clone Pop1-041G20, complete s... 40 6.9
24gb|AE013104.1| Thermoanaerobacter tengcongensis MB4, section 131... 40 6.9
25emb|AL607144.5| Human DNA sequence from clone RP11-398A16 on chr... 40 6.9
26emb|AL160255.14| Human DNA sequence from clone RP11-60N6 on chro... 40 6.9
27emb|AL096851.1|SPBC1105 S.pombe chromosome II cosmid c1105 40 6.9
28emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4... 40 6.9
29ref|NM_001022376.1| Schizosaccharomyces pombe 972h- hypothetical... 40 6.9
30gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, co... 40 6.9
31emb|CR962132.2| Medicago truncatula chromosome 5 clone mte1-33l1... 40 6.9
32gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, co... 40 6.9
33gb|AC004465.1|AC004465 Homo sapiens 12q24 PAC RPCI3-363I18 (Rosw... 40 6.9
34gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, comple... 40 6.9 
>ref|XM_464558.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 987

 Score =  268 bits (135), Expect = 2e-68
 Identities = 231/263 (87%)
 Strand = Plus / Minus

                                                                       
Query: 225 atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
           |||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||| ||| 
Sbjct: 783 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagaccttg 724

                                                                       
Query: 285 atttctttgatgtttggcgagtaaagtggaaagacagattcgacacccacaccagctact 344
           ||||| ||||||||||| |||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 723 atttccttgatgtttggagagtaaagtggaaagacagactcgactccaacaccagctact 664

                                                                       
Query: 345 aatctccgcaatctgaaggttgtatttatcccagcattgcgccttgctatcacaatccct 404
           ||||| |||| |||||| |||||||| ||||||||||| || ||| |||| ||||| |||
Sbjct: 663 aatctacgcagtctgaaagttgtattgatcccagcattacgtcttcctatgacaatgcct 604

                                                                       
Query: 405 tttagtgtagactctcgccttttgttctcaggaacttgcaatctcatctgaatgatgcat 464
           || |  |||||||| || |  |||||||||||||||||||||||||| || || || |||
Sbjct: 603 ttcaacgtagactcacgacgcttgttctcaggaacttgcaatctcatttggataatacat 544

                                  
Query: 465 ccaggctgcacatcaggaatctc 487
           |||||||||||||||||||||||
Sbjct: 543 ccaggctgcacatcaggaatctc 521
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>ref|XM_506756.1| PREDICTED Oryza sativa (japonica cultivar-group), P0544H11.34 mRNA
          Length = 1129

 Score =  268 bits (135), Expect = 2e-68
 Identities = 231/263 (87%)
 Strand = Plus / Minus

                                                                       
Query: 225 atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
           |||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||| ||| 
Sbjct: 788 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagaccttg 729

                                                                       
Query: 285 atttctttgatgtttggcgagtaaagtggaaagacagattcgacacccacaccagctact 344
           ||||| ||||||||||| |||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 728 atttccttgatgtttggagagtaaagtggaaagacagactcgactccaacaccagctact 669

                                                                       
Query: 345 aatctccgcaatctgaaggttgtatttatcccagcattgcgccttgctatcacaatccct 404
           ||||| |||| |||||| |||||||| ||||||||||| || ||| |||| ||||| |||
Sbjct: 668 aatctacgcagtctgaaagttgtattgatcccagcattacgtcttcctatgacaatgcct 609

                                                                       
Query: 405 tttagtgtagactctcgccttttgttctcaggaacttgcaatctcatctgaatgatgcat 464
           || |  |||||||| || |  |||||||||||||||||||||||||| || || || |||
Sbjct: 608 ttcaacgtagactcacgacgcttgttctcaggaacttgcaatctcatttggataatacat 549

                                  
Query: 465 ccaggctgcacatcaggaatctc 487
           |||||||||||||||||||||||
Sbjct: 548 ccaggctgcacatcaggaatctc 526
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>dbj|AK073514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040E14, full
           insert sequence
          Length = 1129

 Score =  268 bits (135), Expect = 2e-68
 Identities = 231/263 (87%)
 Strand = Plus / Minus

                                                                       
Query: 225 atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
           |||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||| ||| 
Sbjct: 788 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagaccttg 729

                                                                       
Query: 285 atttctttgatgtttggcgagtaaagtggaaagacagattcgacacccacaccagctact 344
           ||||| ||||||||||| |||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 728 atttccttgatgtttggagagtaaagtggaaagacagactcgactccaacaccagctact 669

                                                                       
Query: 345 aatctccgcaatctgaaggttgtatttatcccagcattgcgccttgctatcacaatccct 404
           ||||| |||| |||||| |||||||| ||||||||||| || ||| |||| ||||| |||
Sbjct: 668 aatctacgcagtctgaaagttgtattgatcccagcattacgtcttcctatgacaatgcct 609

                                                                       
Query: 405 tttagtgtagactctcgccttttgttctcaggaacttgcaatctcatctgaatgatgcat 464
           || |  |||||||| || |  |||||||||||||||||||||||||| || || || |||
Sbjct: 608 ttcaacgtagactcacgacgcttgttctcaggaacttgcaatctcatttggataatacat 549

                                  
Query: 465 ccaggctgcacatcaggaatctc 487
           |||||||||||||||||||||||
Sbjct: 548 ccaggctgcacatcaggaatctc 526
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>dbj|AK060003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-A07, full
           insert sequence
          Length = 986

 Score =  268 bits (135), Expect = 2e-68
 Identities = 231/263 (87%)
 Strand = Plus / Minus

                                                                       
Query: 225 atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
           |||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||| ||| 
Sbjct: 783 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagaccttg 724

                                                                       
Query: 285 atttctttgatgtttggcgagtaaagtggaaagacagattcgacacccacaccagctact 344
           ||||| ||||||||||| |||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 723 atttccttgatgtttggagagtaaagtggaaagacagactcgactccaacaccagctact 664

                                                                       
Query: 345 aatctccgcaatctgaaggttgtatttatcccagcattgcgccttgctatcacaatccct 404
           ||||| |||| |||||| |||||||| ||||||||||| || ||| |||| ||||| |||
Sbjct: 663 aatctacgcagtctgaaagttgtattgatcccagcattacgtcttcctatgacaatgcct 604

                                                                       
Query: 405 tttagtgtagactctcgccttttgttctcaggaacttgcaatctcatctgaatgatgcat 464
           || |  |||||||| || |  |||||||||||||||||||||||||| || || || |||
Sbjct: 603 ttcaacgtagactcacgacgcttgttctcaggaacttgcaatctcatttggataatacat 544

                                  
Query: 465 ccaggctgcacatcaggaatctc 487
           |||||||||||||||||||||||
Sbjct: 543 ccaggctgcacatcaggaatctc 521
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>gb|AY109347.1| Zea mays CL10949_1 mRNA sequence
          Length = 1525

 Score =  214 bits (108), Expect = 2e-52
 Identities = 150/164 (91%)
 Strand = Plus / Plus

                                                                        
Query: 351  cgcaatctgaaggttgtatttatcccagcattgcgccttgctatcacaatcccttttagt 410
            |||||||||||||||||||| ||||| || ||||||||| ||||||||||||| || || 
Sbjct: 893  cgcaatctgaaggttgtattgatcccggcgttgcgccttcctatcacaatccccttcagc 952

                                                                        
Query: 411  gtagactctcgccttttgttctcaggaacttgcaatctcatctgaatgatgcatccaggc 470
            || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953  gtcgactcacgccgtttgttctcaggaacttgcaatctcatctgaatgatgcatccaggc 1012

                                                        
Query: 471  tgcacatcaggaatctccctctccgagtggaccttatcaaccgc 514
            |||||||||||||||||||| |||||| ||||||| || |||||
Sbjct: 1013 tgcacatcaggaatctccctttccgagcggaccttttcgaccgc 1056



 Score =  155 bits (78), Expect = 2e-34
 Identities = 93/98 (94%)
 Strand = Plus / Plus

                                                                       
Query: 225 atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
           |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||| 
Sbjct: 767 atcctgtccctcaggtaatacagcttagctctcctgactttcttcctgtccaataccttg 826

                                                 
Query: 285 atttctttgatgtttggcgagtaaagtggaaagacaga 322
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 827 atttctttgatgtttggcgagtaaagtggaaagacaga 864
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>ref|XM_466026.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 636

 Score =  151 bits (76), Expect = 3e-33
 Identities = 142/164 (86%)
 Strand = Plus / Minus

                                                                       
Query: 324 tcgacacccacaccagctactaatctccgcaatctgaaggttgtatttatcccagcattg 383
           ||||| || ||||||||||||||||| |||| |||||| |||||||| ||||||||||||
Sbjct: 533 tcgactccaacaccagctactaatctacgcagtctgaaagttgtattgatcccagcattg 474

                                                                       
Query: 384 cgccttgctatcacaatcccttttagtgtagactctcgccttttgttctcaggaacttgc 443
           || |||||||| ||||| ||||| |  |||||||| ||||  || |||||||||||||||
Sbjct: 473 cgtcttgctatgacaatgcctttcaacgtagactcgcgccgcttcttctcaggaacttgc 414

                                                       
Query: 444 aatctcatctgaatgatgcatccaggctgcacatcaggaatctc 487
           | |||||| || |  || ||||||||||||||||||||||||||
Sbjct: 413 agtctcatttggagaatacatccaggctgcacatcaggaatctc 370



 Score =  103 bits (52), Expect = 6e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                       
Query: 225 atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
           |||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||| ||| 
Sbjct: 617 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagaccttg 558

                                   
Query: 285 atttctttgatgtttggcgagtaa 308
           ||||||||||||||||| ||||||
Sbjct: 557 atttctttgatgtttggagagtaa 534
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  133 bits (67), Expect = 6e-28
 Identities = 118/135 (87%)
 Strand = Plus / Minus

                                                                            
Query: 309      agtggaaagacagattcgacacccacaccagctactaatctccgcaatctgaaggttgta 368
                |||||||||||||| ||||| || ||||||||||||||||| |||| |||||| ||||||
Sbjct: 19179294 agtggaaagacagactcgactccaacaccagctactaatctacgcagtctgaaagttgta 19179235

                                                                            
Query: 369      tttatcccagcattgcgccttgctatcacaatcccttttagtgtagactctcgccttttg 428
                || |||||||||||||| |||||||| ||||| ||||| |  |||||||| ||||  || 
Sbjct: 19179234 ttgatcccagcattgcgtcttgctatgacaatgcctttcaacgtagactcgcgccgcttc 19179175

                               
Query: 429      ttctcaggaacttgc 443
                |||||||||||||||
Sbjct: 19179174 ttctcaggaacttgc 19179160



 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                           
Query: 309     agtggaaagacagattcgacacccacaccagctactaatctccgcaatctgaaggttgta 368
               |||||||||||||| ||||| || ||||||||||||||||| |||| |||||| ||||||
Sbjct: 5908328 agtggaaagacagactcgactccaacaccagctactaatctacgcagtctgaaagttgta 5908387

                                                                           
Query: 369     tttatcccagcattgcgccttgctatcacaatcccttttagtgtagactctcgccttttg 428
               || ||||||||||| || ||| |||| ||||| ||||| |  |||||||| || |  |||
Sbjct: 5908388 ttgatcccagcattacgtcttcctatgacaatgcctttcaacgtagactcacgacgcttg 5908447

                              
Query: 429     ttctcaggaacttgc 443
               |||||||||||||||
Sbjct: 5908448 ttctcaggaacttgc 5908462



 Score =  103 bits (52), Expect = 6e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                            
Query: 225      atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
                |||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||| ||| 
Sbjct: 19180287 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagaccttg 19180228

                                        
Query: 285      atttctttgatgtttggcgagtaa 308
                ||||||||||||||||| ||||||
Sbjct: 19180227 atttctttgatgtttggagagtaa 19180204



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                            
Query: 225      atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
                |||||||| | ||||||||||| ||| |||||||| |||||||||||||||||||  || 
Sbjct: 19180898 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagactttg 19180839

                                        
Query: 285      atttctttgatgtttggcgagtaa 308
                ||||||||||||||||| ||||||
Sbjct: 19180838 atttctttgatgtttggagagtaa 19180815



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                           
Query: 225     atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
               |||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||| ||| 
Sbjct: 5907374 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagaccttg 5907433

                                       
Query: 285     atttctttgatgtttggcgagtaa 308
               ||||| ||||||||||| ||||||
Sbjct: 5907434 atttccttgatgtttggagagtaa 5907457



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                            
Query: 443     caatctcatctgaatgatgcatccaggctgcacatcaggaatctc 487
               ||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 5908542 caatctcatttggataatacatccaggctgcacatcaggaatctc 5908586



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 462      catccaggctgcacatcaggaatctc 487
                ||||||||||||||||||||||||||
Sbjct: 19179059 catccaggctgcacatcaggaatctc 19179034
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>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score =  133 bits (67), Expect = 6e-28
 Identities = 118/135 (87%)
 Strand = Plus / Minus

                                                                         
Query: 309   agtggaaagacagattcgacacccacaccagctactaatctccgcaatctgaaggttgta 368
             |||||||||||||| ||||| || ||||||||||||||||| |||| |||||| ||||||
Sbjct: 77543 agtggaaagacagactcgactccaacaccagctactaatctacgcagtctgaaagttgta 77484

                                                                         
Query: 369   tttatcccagcattgcgccttgctatcacaatcccttttagtgtagactctcgccttttg 428
             || |||||||||||||| |||||||| ||||| ||||| |  |||||||| ||||  || 
Sbjct: 77483 ttgatcccagcattgcgtcttgctatgacaatgcctttcaacgtagactcgcgccgcttc 77424

                            
Query: 429   ttctcaggaacttgc 443
             |||||||||||||||
Sbjct: 77423 ttctcaggaacttgc 77409



 Score =  103 bits (52), Expect = 6e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                         
Query: 225   atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
             |||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||| ||| 
Sbjct: 78536 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagaccttg 78477

                                     
Query: 285   atttctttgatgtttggcgagtaa 308
             ||||||||||||||||| ||||||
Sbjct: 78476 atttctttgatgtttggagagtaa 78453



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                         
Query: 225   atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
             |||||||| | ||||||||||| ||| |||||||| |||||||||||||||||||  || 
Sbjct: 79147 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagactttg 79088

                                     
Query: 285   atttctttgatgtttggcgagtaa 308
             ||||||||||||||||| ||||||
Sbjct: 79087 atttctttgatgtttggagagtaa 79064



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 462   catccaggctgcacatcaggaatctc 487
             ||||||||||||||||||||||||||
Sbjct: 77308 catccaggctgcacatcaggaatctc 77283
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>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0056C19
          Length = 147739

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                         
Query: 309   agtggaaagacagattcgacacccacaccagctactaatctccgcaatctgaaggttgta 368
             |||||||||||||| ||||| || ||||||||||||||||| |||| |||||| ||||||
Sbjct: 86549 agtggaaagacagactcgactccaacaccagctactaatctacgcagtctgaaagttgta 86608

                                                                         
Query: 369   tttatcccagcattgcgccttgctatcacaatcccttttagtgtagactctcgccttttg 428
             || ||||||||||| || ||| |||| ||||| ||||| |  |||||||| || |  |||
Sbjct: 86609 ttgatcccagcattacgtcttcctatgacaatgcctttcaacgtagactcacgacgcttg 86668

                            
Query: 429   ttctcaggaacttgc 443
             |||||||||||||||
Sbjct: 86669 ttctcaggaacttgc 86683



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                         
Query: 225   atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
             |||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||| ||| 
Sbjct: 85595 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagaccttg 85654

                                     
Query: 285   atttctttgatgtttggcgagtaa 308
             ||||| ||||||||||| ||||||
Sbjct: 85655 atttccttgatgtttggagagtaa 85678



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 443   caatctcatctgaatgatgcatccaggctgcacatcaggaatctc 487
             ||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 86763 caatctcatttggataatacatccaggctgcacatcaggaatctc 86807
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>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0544H11
          Length = 178376

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                          
Query: 309    agtggaaagacagattcgacacccacaccagctactaatctccgcaatctgaaggttgta 368
              |||||||||||||| ||||| || ||||||||||||||||| |||| |||||| ||||||
Sbjct: 138130 agtggaaagacagactcgactccaacaccagctactaatctacgcagtctgaaagttgta 138189

                                                                          
Query: 369    tttatcccagcattgcgccttgctatcacaatcccttttagtgtagactctcgccttttg 428
              || ||||||||||| || ||| |||| ||||| ||||| |  |||||||| || |  |||
Sbjct: 138190 ttgatcccagcattacgtcttcctatgacaatgcctttcaacgtagactcacgacgcttg 138249

                             
Query: 429    ttctcaggaacttgc 443
              |||||||||||||||
Sbjct: 138250 ttctcaggaacttgc 138264



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                          
Query: 225    atcctgtctctcaggtaatacagcttagctctcctcactttcttcctgtccaagatcttc 284
              |||||||| | ||||||||||| ||| |||||||| ||||||||||||||||||| ||| 
Sbjct: 137176 atcctgtcccgcaggtaatacaactttgctctcctgactttcttcctgtccaagaccttg 137235

                                      
Query: 285    atttctttgatgtttggcgagtaa 308
              ||||| ||||||||||| ||||||
Sbjct: 137236 atttccttgatgtttggagagtaa 137259



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                           
Query: 443    caatctcatctgaatgatgcatccaggctgcacatcaggaatctc 487
              ||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 138344 caatctcatttggataatacatccaggctgcacatcaggaatctc 138388
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>gb|BT014281.1| Lycopersicon esculentum clone 133514F, mRNA sequence
          Length = 1317

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 356 tctgaaggttgtatttatcccagcattgcgccttgctatcacaatcccttt 406
           |||||| || |||||||  ||||||||||||||||||||||| || |||||
Sbjct: 742 tctgaatgtagtatttaaaccagcattgcgccttgctatcactatgccttt 692
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>gb|AY105955.1| Zea mays PCO121693 mRNA sequence
          Length = 1004

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 229 tgtctctcaggtaatacagcttagctctcctcactttctt 268
           ||||| ||||||| |||| ||| |||||||||||||||||
Sbjct: 788 tgtctttcaggtagtacaactttgctctcctcactttctt 749
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>gb|AF288225.1| Salmonella typhimurium resistance against oxidative stress protein
           A (rox-A) gene, complete cds
          Length = 1724

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 368 atttatcccagcattgcgccttgctatcaca 398
           ||||| ||||||||||||||| |||||||||
Sbjct: 329 atttaccccagcattgcgcctggctatcaca 299
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>gb|AE008722.1| Salmonella typhimurium LT2, section 30 of 220 of the complete genome
          Length = 20029

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 368   atttatcccagcattgcgccttgctatcaca 398
             ||||| ||||||||||||||| |||||||||
Sbjct: 19005 atttaccccagcattgcgcctggctatcaca 18975
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>emb|X17250.1|STNITRD Salmonella typhimurium gene for nitroreductase
          Length = 1690

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 368 atttatcccagcattgcgccttgctatcaca 398
           ||||| ||||||||||||||| |||||||||
Sbjct: 32  atttaccccagcattgcgcctggctatcaca 62
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>emb|AL627267.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 3/20
          Length = 240050

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 368    atttatcccagcattgcgccttgctatcaca 398
              ||||| ||||||||||||||| |||||||||
Sbjct: 103066 atttaccccagcattgcgcctggctatcaca 103036
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 368     atttatcccagcattgcgccttgctatcaca 398
               ||||| ||||||||||||||| |||||||||
Sbjct: 2359035 atttaccccagcattgcgcctggctatcaca 2359065
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
              complete genome
          Length = 4755700

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 368    atttatcccagcattgcgccttgctatcaca 398
              ||||| ||||||||||||||| |||||||||
Sbjct: 680501 atttaccccagcattgcgcctggctatcaca 680471
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>ref|XM_448461.1| Candida glabrata CBS138, CAGL0K05423g partial mRNA
          Length = 1230

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 287  ttctttgatgtttggcgagtaa 308
            ||||||||||||||||||||||
Sbjct: 1123 ttctttgatgtttggcgagtaa 1102
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>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 287    ttctttgatgtttggcgagtaa 308
              ||||||||||||||||||||||
Sbjct: 532884 ttctttgatgtttggcgagtaa 532863
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>ref|XM_426249.1| PREDICTED: Gallus gallus similar to cysteinyl leukotriene receptor 1
            (LOC428691), mRNA
          Length = 2643

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 458  gatgcatccaggctgcacatc 478
            |||||||||||||||||||||
Sbjct: 1544 gatgcatccaggctgcacatc 1524
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>gb|AC010996.9| Homo sapiens chromosome 10 clone RP11-118J22, complete sequence
          Length = 169512

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   agatcttcatttctttgatgt 297
             |||||||||||||||||||||
Sbjct: 28090 agatcttcatttctttgatgt 28070
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>gb|AC151955.2| Populus trichocarpa clone Pop1-041G20, complete sequence
          Length = 129953

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   atcttcatttctttgatgtt 298
             ||||||||||||||||||||
Sbjct: 48812 atcttcatttctttgatgtt 48793
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>gb|AE013104.1| Thermoanaerobacter tengcongensis MB4, section 131 of 244 of the
            complete genome
          Length = 14571

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 234  ctcaggtaatacagcttagctctcctcacttt 265
            ||||||||||| ||||| |||||||| |||||
Sbjct: 5538 ctcaggtaataaagctttgctctcctaacttt 5569
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>emb|AL607144.5| Human DNA sequence from clone RP11-398A16 on chromosome 13 Contains
             part of a novel gene (KIAA0774) and a CpG island, complete
             sequence
          Length = 93294

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   tccaagatcttcatttcttt 292
             ||||||||||||||||||||
Sbjct: 12072 tccaagatcttcatttcttt 12091
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>emb|AL160255.14| Human DNA sequence from clone RP11-60N6 on chromosome 13 Contains the
             5' end of a novel gene (KIAA0774), complete sequence
          Length = 172923

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   tccaagatcttcatttcttt 292
             ||||||||||||||||||||
Sbjct: 29341 tccaagatcttcatttcttt 29360
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>emb|AL096851.1|SPBC1105 S.pombe chromosome II cosmid c1105
          Length = 34982

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 agagcaaaaatcgtagaaac 190
           ||||||||||||||||||||
Sbjct: 408 agagcaaaaatcgtagaaac 389
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>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE
          Length = 114414

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 285  atttctttgatgtttggcgagtaa 308
            ||||||||||||||||| ||||||
Sbjct: 6549 atttctttgatgtttggtgagtaa 6526
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>ref|NM_001022376.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC1105.01),
           partial mRNA
          Length = 970

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 agagcaaaaatcgtagaaac 190
           ||||||||||||||||||||
Sbjct: 411 agagcaaaaatcgtagaaac 392
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>gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, complete sequence
          Length = 198851

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   tcttcatttctttgatgttt 299
             ||||||||||||||||||||
Sbjct: 80256 tcttcatttctttgatgttt 80237
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>emb|CR962132.2| Medicago truncatula chromosome 5 clone mte1-33l16, COMPLETE SEQUENCE
          Length = 47783

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 285   atttctttgatgtttggcgagtaa 308
             ||||||||||||||||| ||||||
Sbjct: 32981 atttctttgatgtttggtgagtaa 32958
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>gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, complete sequence
          Length = 227631

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    tcttcatttctttgatgttt 299
              ||||||||||||||||||||
Sbjct: 216913 tcttcatttctttgatgttt 216932
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>gb|AC004465.1|AC004465 Homo sapiens 12q24 PAC RPCI3-363I18 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 102750

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   taaagtggaaagacagattc 325
             ||||||||||||||||||||
Sbjct: 23250 taaagtggaaagacagattc 23269
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>gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, complete sequence
          Length = 170607

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 453    tgaatgatgcatccaggctgcaca 476
              |||||||||||| |||||||||||
Sbjct: 120876 tgaatgatgcatacaggctgcaca 120853


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,644,994
Number of Sequences: 3902068
Number of extensions: 4644994
Number of successful extensions: 77875
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77738
Number of HSP's gapped (non-prelim): 137
length of query: 514
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 491
effective length of database: 17,143,297,704
effective search space: 8417359172664
effective search space used: 8417359172664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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