Clone Information

BLAST Search Result

Clone Name	rbaal0b12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS4_MAIZE (O22424) 40S ribosomal protein S4	121	3e-43
2	RS4_SOLTU (P46300) 40S ribosomal protein S4	118	4e-42
3	RS4_PRUAR (O81363) 40S ribosomal protein S4	118	4e-42
4	RS4_GOSHI (P46299) 40S ribosomal protein S4	115	3e-41
5	RS4_ARATH (P49204) 40S ribosomal protein S4	117	1e-40
6	RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform	96	3e-32
7	RS4_XENTR (Q6PBC4) 40S ribosomal protein S4	94	5e-32
8	RS4_XENLA (P49401) 40S ribosomal protein S4	94	5e-32
9	RS4_CRIGR (P47961) 40S ribosomal protein S4	94	5e-32
10	RS4_CHICK (P47836) 40S ribosomal protein S4	94	5e-32
11	RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform	94	5e-32
12	RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform	94	5e-32
13	RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform	94	5e-32
14	RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform	94	5e-32
15	RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single ...	94	5e-32
16	RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform	94	5e-32
17	RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform	94	5e-32
18	RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1	96	1e-31
19	RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform	93	6e-31
20	RS4_ICTPU (Q90YS0) 40S ribosomal protein S4	89	3e-30
21	RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1	92	5e-30
22	RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1	92	8e-30
23	RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1	91	1e-29
24	RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1	90	4e-29
25	RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1	90	4e-29
26	RS4_DROME (P41042) 40S ribosomal protein S4	92	5e-29
27	RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1	92	7e-29
28	RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2	89	1e-28
29	RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2	88	1e-28
30	RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B	80	9e-28
31	RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C	80	2e-27
32	RS4A_SCHPO (P87158) 40S ribosomal protein S4-A	80	2e-27
33	RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)	97	2e-27
34	RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)	77	2e-25
35	RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)	73	2e-25
36	RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)	74	5e-25
37	RS4_DICDI (P51405) 40S ribosomal protein S4	74	3e-22
38	RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4	72	2e-21
39	RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)	63	3e-13
40	RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)	63	3e-13
41	FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (...	33	0.38
42	Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977	31	1.9
43	LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3....	31	2.5
44	ABDB_DROME (P09087) Homeobox protein abdominal-B (P3) (Infraabdo...	31	2.5
45	YCGV_ECO57 (Q8X583) Hypothetical protein ycgV	30	4.3

>RS4_MAIZE (O22424) 40S ribosomal protein S4|
          Length = 265

 Score =  121 bits (303), Expect(2) = 3e-43
 Identities = 56/62 (90%), Positives = 60/62 (96%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           IKNREKHKG+FETIHVED+ GHQFATR+GNVFTIGKG KPWVSLPKGKGIKL+IIEEQRK
Sbjct: 195 IKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRK 254

Query: 204 RD 199
           RD
Sbjct: 255 RD 256



 Score = 73.6 bits (179), Expect(2) = 3e-43
 Identities = 34/35 (97%), Positives = 35/35 (100%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           GRTIRYPDPLIKANDTIK+DLETNKIVDFIKFDVG
Sbjct: 144 GRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVG 178

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>RS4_SOLTU (P46300) 40S ribosomal protein S4|
          Length = 264

 Score =  118 bits (295), Expect(2) = 4e-42
 Identities = 52/61 (85%), Positives = 60/61 (98%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           IKNREKHKG+FET+H++D+QGH+FATRLGNVFT+GKGTKPWVSLPKGKGIKLTIIE+ RK
Sbjct: 195 IKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARK 254

Query: 204 R 202
           R
Sbjct: 255 R 255



 Score = 72.8 bits (177), Expect(2) = 4e-42
 Identities = 34/35 (97%), Positives = 35/35 (100%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           GRTIRYPDPLIKANDTIKLDLE+NKIVDFIKFDVG
Sbjct: 144 GRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVG 178

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>RS4_PRUAR (O81363) 40S ribosomal protein S4|
          Length = 261

 Score =  118 bits (295), Expect(2) = 4e-42
 Identities = 54/61 (88%), Positives = 59/61 (96%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           IKNREKHKG+FETIHV+DA GH+FATRLGNVFTIGKGTKPWVSLPKGKGIKLTI+EE +K
Sbjct: 191 IKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTILEEAKK 250

Query: 204 R 202
           R
Sbjct: 251 R 251



 Score = 72.8 bits (177), Expect(2) = 4e-42
 Identities = 34/35 (97%), Positives = 34/35 (97%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           GRTIRYPDPLIKANDTIKLDLETNKI DFIKFDVG
Sbjct: 140 GRTIRYPDPLIKANDTIKLDLETNKITDFIKFDVG 174

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>RS4_GOSHI (P46299) 40S ribosomal protein S4|
          Length = 262

 Score =  115 bits (288), Expect(2) = 3e-41
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           IKNREKHKG+FETIHV+DA GH+FATRLGNVFTIGKGTKPWVSLPK KGIKL+IIEE RK
Sbjct: 195 IKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIKLSIIEEARK 254

Query: 204 R 202
           R
Sbjct: 255 R 255



 Score = 72.8 bits (177), Expect(2) = 3e-41
 Identities = 34/35 (97%), Positives = 35/35 (100%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           GRTIRYPDPLIKANDTIKLDLE+NKIVDFIKFDVG
Sbjct: 144 GRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVG 178

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>RS4_ARATH (P49204) 40S ribosomal protein S4|
          Length = 262

 Score =  117 bits (293), Expect(2) = 1e-40
 Identities = 53/61 (86%), Positives = 59/61 (96%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           IKNREKHKG+FETIH++D+ GH+FATRLGNV+TIGKGTKPWVSLPKGKGIKLTIIEE RK
Sbjct: 195 IKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARK 254

Query: 204 R 202
           R
Sbjct: 255 R 255



 Score = 68.6 bits (166), Expect(2) = 1e-40
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           GRTIRYPDPLIK NDTIKLDLE NKIV+FIKFDVG
Sbjct: 144 GRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVG 178

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>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 95.5 bits (236), Expect(2) = 3e-32
 Identities = 41/61 (67%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NREKH G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.4 bits (150), Expect(2) = 3e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTG 177

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>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4|
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4_XENLA (P49401) 40S ribosomal protein S4|
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4_CRIGR (P47961) 40S ribosomal protein S4|
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4_CHICK (P47836) 40S ribosomal protein S4|
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant|
           mRNA protein) (SCR10)
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.8 bits (151), Expect(2) = 5e-32
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 177

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>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 95.5 bits (236), Expect(2) = 1e-31
 Identities = 41/61 (67%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NREKH G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 60.5 bits (145), Expect(2) = 1e-31
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDT++++LET KI DFIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTVQINLETGKITDFIKFDTG 177

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>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score = 93.2 bits (230), Expect(2) = 6e-31
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NREKH G+F+ +HV+D+ G+ FATRL N+F IGKG KPWVSLP+GKG++LTI EE+ K
Sbjct: 194 ITNREKHPGSFDVVHVKDSIGNSFATRLSNIFVIGKGNKPWVSLPRGKGVRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 60.5 bits (145), Expect(2) = 6e-31
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DL+T KI DFIKF+ G
Sbjct: 144 RTIRYPDPLIKVNDTIRIDLDTGKITDFIKFETG 177

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>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4|
          Length = 262

 Score = 89.4 bits (220), Expect(2) = 3e-30
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+D+ G+ FATRL N+F IGKG K WVS+P+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKAWVSIPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 62.0 bits (149), Expect(2) = 3e-30
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDP+IKANDT+++DLET KI +FIKFD G
Sbjct: 144 RTIRYPDPMIKANDTVRIDLETGKITEFIKFDTG 177

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>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 91.7 bits (226), Expect(2) = 5e-30
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 58.9 bits (141), Expect(2) = 5e-30
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDT+++DL T KI++FIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTG 177

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>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 92.0 bits (227), Expect(2) = 8e-30
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 57.8 bits (138), Expect(2) = 8e-30
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDP+IK NDT+++DL T KI++FIKFD G
Sbjct: 144 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTG 177

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>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 91.3 bits (225), Expect(2) = 1e-29
 Identities = 37/61 (60%), Positives = 50/61 (81%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LT+ EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 57.8 bits (138), Expect(2) = 1e-29
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDP+IK NDT+++DL T KI++FIKFD G
Sbjct: 144 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTG 177

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>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 89.7 bits (221), Expect(2) = 4e-29
 Identities = 37/61 (60%), Positives = 49/61 (80%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IG G KPW+SLP+GKGI+LT+  E+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 57.8 bits (138), Expect(2) = 4e-29
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDP+IK NDT+++DL T KI++FIKFD G
Sbjct: 144 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTG 177

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>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 89.7 bits (221), Expect(2) = 4e-29
 Identities = 37/61 (60%), Positives = 49/61 (80%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATRL N+F IG G KPW+SLP+GKGI+LT+  E+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 57.8 bits (138), Expect(2) = 4e-29
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDP+IK NDT+++DL T KI++FIKFD G
Sbjct: 144 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTG 177

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>RS4_DROME (P41042) 40S ribosomal protein S4|
          Length = 261

 Score = 91.7 bits (226), Expect(2) = 5e-29
 Identities = 39/61 (63%), Positives = 52/61 (85%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           + NRE+H G+F+ +H++D+QGH FATRL NVF IGKG KP++SLPKGKG+KL+I EE+ K
Sbjct: 195 VVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDK 254

Query: 204 R 202
           R
Sbjct: 255 R 255



 Score = 55.5 bits (132), Expect(2) = 5e-29
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           GRTIRYPDPLI AND++++D+ + KI D+IKFD G
Sbjct: 144 GRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSG 178

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>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score = 91.7 bits (226), Expect(2) = 7e-29
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+F+ +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 55.1 bits (131), Expect(2) = 7e-29
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDP+IK NDT+++DL + KI  FIKFD G
Sbjct: 144 RTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTG 177

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>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2|
          Length = 262

 Score = 88.6 bits (218), Expect(2) = 1e-28
 Identities = 37/61 (60%), Positives = 49/61 (80%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I NRE+H G+ + +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 ITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 57.4 bits (137), Expect(2) = 1e-28
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDT+++DL T KI  FIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTG 177

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>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2|
          Length = 262

 Score = 88.2 bits (217), Expect(2) = 1e-28
 Identities = 36/61 (59%), Positives = 49/61 (80%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           + NRE+H G+ + +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ K
Sbjct: 194 VTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 57.4 bits (137), Expect(2) = 1e-28
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDT+++DL T KI  FIKFD G
Sbjct: 144 RTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTG 177

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>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B|
          Length = 262

 Score = 80.5 bits (197), Expect(2) = 9e-28
 Identities = 37/61 (60%), Positives = 47/61 (77%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I +RE H G+FE IHV+DA   +FATRL NVF IG+  K W+SLPKGKG+KL+I EE+ +
Sbjct: 195 IVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDR 254

Query: 204 R 202
           R
Sbjct: 255 R 255



 Score = 62.4 bits (150), Expect(2) = 9e-28
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 440
           GRTIRYPDPLIK NDTIKL+LETNKI  FIKFD
Sbjct: 144 GRTIRYPDPLIKVNDTIKLNLETNKIESFIKFD 176

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>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C|
          Length = 262

 Score = 79.7 bits (195), Expect(2) = 2e-27
 Identities = 37/61 (60%), Positives = 47/61 (77%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I +RE H G+FE IHV+DA   +FATRL NVF IG+  K W+SLPKGKG+KL+I EE+ +
Sbjct: 195 IVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDR 254

Query: 204 R 202
           R
Sbjct: 255 R 255



 Score = 62.4 bits (150), Expect(2) = 2e-27
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 440
           GRTIRYPDPLIK NDTIKL+LETNKI  FIKFD
Sbjct: 144 GRTIRYPDPLIKVNDTIKLNLETNKIESFIKFD 176

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>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A|
          Length = 262

 Score = 79.7 bits (195), Expect(2) = 2e-27
 Identities = 37/61 (60%), Positives = 47/61 (77%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I +RE H G+FE IHV+DA   +FATRL NVF IG+  K W+SLPKGKG+KL+I EE+ +
Sbjct: 195 IVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDR 254

Query: 204 R 202
           R
Sbjct: 255 R 255



 Score = 62.4 bits (150), Expect(2) = 2e-27
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFD 440
           GRTIRYPDPLIK NDTIKL+LETNKI  FIKFD
Sbjct: 144 GRTIRYPDPLIKVNDTIKLNLETNKIESFIKFD 176

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>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)|
          Length = 268

 Score = 96.7 bits (239), Expect(3) = 2e-27
 Identities = 45/49 (91%), Positives = 47/49 (95%)
 Frame = -2

Query: 363 KGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIE 217
           KG+FETIHVEDA GHQFATRLGNVFTIGKG KPWVSLPKGKGIKL+IIE
Sbjct: 205 KGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIE 253



 Score = 34.3 bits (77), Expect(3) = 2e-27
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -1

Query: 424 HGDWWAQHWACWCDQEQGEA*GN 356
           HGDW  ++ A WCDQ+QGEA G+
Sbjct: 186 HGDW-RRNTAVWCDQQQGEAKGS 207



 Score = 31.2 bits (69), Expect(3) = 2e-27
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -3

Query: 518 RPTHQGQRHHQARPGDQQDC*LHQ 447
           RPT  G+RH+Q R GDQQ+  LHQ
Sbjct: 156 RPT-SGKRHNQDRSGDQQELRLHQ 178

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>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)|
          Length = 260

 Score = 76.6 bits (187), Expect(2) = 2e-25
 Identities = 35/61 (57%), Positives = 47/61 (77%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I +RE+H+G F+ +H++DA  +QF TRL NVF IG+G K  +SLPKGKGIKL+I EE+  
Sbjct: 195 ITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEERDA 254

Query: 204 R 202
           R
Sbjct: 255 R 255



 Score = 58.5 bits (140), Expect(2) = 2e-25
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           GRTIRYPDPLIK NDT+K+DL T KI  F+KF+ G
Sbjct: 144 GRTIRYPDPLIKVNDTVKIDLATGKITSFVKFENG 178

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>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)|
          Length = 262

 Score = 72.8 bits (177), Expect(2) = 2e-25
 Identities = 36/62 (58%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIG-KGTKPWVSLPKGKGIKLTIIEEQR 208
           I +REK +G F+ +H++DA  + F TRL NVF IG +  KPWVSLPKGKGIKL+I EE+ 
Sbjct: 195 IVHREKLEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERD 254

Query: 207 KR 202
           +R
Sbjct: 255 RR 256



 Score = 62.0 bits (149), Expect(2) = 2e-25
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVGQ 431
           GRTIRYPDPLI+ANDT+K+DL T KI  FIKFD G+
Sbjct: 144 GRTIRYPDPLIRANDTVKIDLATGKIXSFIKFDTGR 179

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>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)|
          Length = 260

 Score = 73.6 bits (179), Expect(2) = 5e-25
 Identities = 32/61 (52%), Positives = 47/61 (77%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I ++E+H G F+ +H++D+  + F TRL NVF IG+  KP++SLPKGKGIKL+I EE+ +
Sbjct: 194 IVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDR 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 60.1 bits (144), Expect(2) = 5e-25
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVGQ 431
           GRTIRYPDP IK NDT+K+DL + KI DFIKFD G+
Sbjct: 143 GRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGK 178

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>RS4_DICDI (P51405) 40S ribosomal protein S4|
          Length = 266

 Score = 73.9 bits (180), Expect(2) = 3e-22
 Identities = 31/58 (53%), Positives = 45/58 (77%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQ 211
           + +REKH G+F+ +HV D  GHQFATRL NVF IGK ++ +VSLP GKG++ + ++E+
Sbjct: 194 VTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDER 251



 Score = 50.4 bits (119), Expect(2) = 3e-22
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDV 437
           GRTIRYPDP I  +DTIK+D+E+ KI  FI F+V
Sbjct: 143 GRTIRYPDPAISIHDTIKIDIESGKITAFIPFEV 176

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>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4|
          Length = 259

 Score = 72.0 bits (175), Expect(2) = 2e-21
 Identities = 34/61 (55%), Positives = 44/61 (72%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRK 205
           I +RE+  G  + IH++D+ GH FATR+ NVF IGKG K  VSLP G GI+L+I EE+ K
Sbjct: 194 IGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDK 253

Query: 204 R 202
           R
Sbjct: 254 R 254



 Score = 49.7 bits (117), Expect(2) = 2e-21
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -1

Query: 538 GRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           GRTIRYPDP +K NDTI  ++ T KI D +KF+ G
Sbjct: 143 GRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPG 177

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>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 62.8 bits (151), Expect(2) = 3e-13
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 126 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 159



 Score = 31.2 bits (69), Expect(2) = 3e-13
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDA 328
           I NRE+H G+F+ +HV+DA
Sbjct: 176 ITNRERHPGSFDVVHVKDA 194

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>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 62.8 bits (151), Expect(2) = 3e-13
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -1

Query: 535 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVG 434
           RTIRYPDPLIK NDTI++DLET KI DFIKFD G
Sbjct: 126 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 159



 Score = 31.2 bits (69), Expect(2) = 3e-13
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDA 328
           I NRE+H G+F+ +HV+DA
Sbjct: 176 ITNRERHPGSFDVVHVKDA 194

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>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin|
           resistance protein)
          Length = 154

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 384 IKNREKHKGTFETIHVEDAQGHQFATRLGNVF---TIGKGTKPWVSLPKG 244
           +K R++H+G  ++I+  D  GH+F    G+VF      +  KP +S  +G
Sbjct: 95  LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144

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>Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977|
          Length = 199

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
 Frame = +1

Query: 283 NGEH------VAQTGGKLVTLGILNVDGLKGSLMLL 372
           NG H      V + GGKL  +G+L  D LKGSL +L
Sbjct: 36  NGSHNPGATNVLRNGGKLAAIGVLLFDTLKGSLPVL 71

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>LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase)
           (Late nodulin 56) (N-56)
          Length = 565

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = -2

Query: 369 KHKGTFETIHVEDAQGHQFATRLGNV 292
           KHKGT+ETI  E+  GH+  TR+G V
Sbjct: 345 KHKGTYETISPEEI-GHKRTTRIGIV 369

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>ABDB_DROME (P09087) Homeobox protein abdominal-B (P3) (Infraabdominal 7)|
           (IAB-7) (PH189)
          Length = 493

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 533 HHPLPRPTHQGQRHHQARPGDQQ 465
           HH LP+P H    HH A P  QQ
Sbjct: 36  HHHLPQPLHTTSHHHSAHPHLQQ 58

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>YCGV_ECO57 (Q8X583) Hypothetical protein ycgV|
          Length = 547

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 360 GTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 262
           GTF T++VE+  G+       +V   G G KPW
Sbjct: 514 GTFTTLNVENLSGNSTFIMRADVVGEGNGVKPW 546


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,173,529
Number of Sequences: 219361
Number of extensions: 1592608
Number of successful extensions: 4457
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 4235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4456
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result