| Clone Name | rbags21f17 |
|---|---|
| Clone Library Name | barley_pub |
>ORAV1_MOUSE (Q8CH62) Oral cancer overexpressed protein 1 homolog| Length = 137 Score = 53.9 bits (128), Expect = 4e-07 Identities = 28/97 (28%), Positives = 49/97 (50%) Frame = -3 Query: 633 EGRQVGLKNGFQVGEELGFYQGCLDVWMSIIRLDQDAFSARVRKYIEQLAALVSNYPLSD 454 EG++ G+ +G ++G E+G Y+G W ++ +R K +E L AL+ ++P D Sbjct: 37 EGKRYGMVHGAKIGSEIGCYRGFALAWKCLLHSGAGEKDSRKMKVVEALIALLQDFPYDD 96 Query: 453 PEDEQLQGMMREIRLKFSVITGSLGAKLGYEGRPTSS 343 P E+L + IR KF + L + ++ P S Sbjct: 97 PTYEKLHEDLDRIRGKFRQLCSLLNVQPDFKVTPGGS 133
>ORAV1_HUMAN (Q8WV07) Oral cancer overexpressed protein 1 (Tumor amplified and| overexpressed sequence 1) Length = 137 Score = 50.8 bits (120), Expect = 3e-06 Identities = 25/77 (32%), Positives = 40/77 (51%) Frame = -3 Query: 633 EGRQVGLKNGFQVGEELGFYQGCLDVWMSIIRLDQDAFSARVRKYIEQLAALVSNYPLSD 454 EGRQ G +G ++G E+G YQG W ++ +R K +E L ++ +P D Sbjct: 37 EGRQHGTLHGAKIGSEIGCYQGFAFAWKCLLHSCTTEKDSRKMKVLESLIGMIQKFPYDD 96 Query: 453 PEDEQLQGMMREIRLKF 403 P ++L + +IR KF Sbjct: 97 PTYDKLHEDLDKIRGKF 113
>SVIL_MOUSE (Q8K4L3) Supervillin (Archvillin) (p205/p250)| Length = 2170 Score = 32.7 bits (73), Expect = 0.93 Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 12/165 (7%) Frame = +3 Query: 171 RYPSGSTIRETEHHHKYKIKRE-TILAPNISFKVVTET-*YHKGPFGNSKQATYPQCLAQ 344 RYPSGS I E K + + ++ A + F+ + ++ H P +S+ A Q L + Sbjct: 629 RYPSGSEIPVVEDEEKVDERAKLSVAAKRLLFREMEKSFDEHTVPKRHSRNAAVEQRLRR 688 Query: 345 MMWGDLHTPILLLSFL**R*ISAVS--PSSCLEAAHP----LDQTKDSCSQVQLVALCIS 506 + PI + I+A P+SC HP L + S VQ L S Sbjct: 689 LQDRSHTQPITTEEVV----IAATEPIPASCSGVTHPVTARLPSPTVARSSVQPARLQAS 744 Query: 507 SHELRMHLDR-GELLTSTHPSSPDRIPVL---RLPGNHSLSQPAS 629 +H+ + D+ E S P PD + +L + LSQP S Sbjct: 745 AHQKALARDQANEGRESAEPGEPDSSTLSLAEKLALFNKLSQPVS 789
>UVRB_CLOAB (Q97LQ2) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 666 Score = 31.2 bits (69), Expect = 2.7 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 16/101 (15%) Frame = +3 Query: 12 YYPKFFLXYSEENHLILKREDHIYNEQRDPKN----------------PLKFEDFAADVX 143 Y+P FL + +E+H+ L + +Y R KN PLKF++F + Sbjct: 327 YFPDDFLMFIDESHVTLPQVKAMYGGDRSRKNSLVDYGFRLPSAYDNRPLKFDEFEEKIN 386 Query: 144 YI*SAPDILRYPSGSTIRETEHHHKYKIKRETILAPNISFK 266 I + PS + +E+ + I+ +L P I + Sbjct: 387 QI---VFVSATPSNYELDHSENIAEQVIRPTGLLDPEIEVR 424
>SLK_MOUSE (O54988) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)| (STE20-like kinase) (STE20-related serine/threonine-protein kinase) (STE20-related kinase) (mSLK) (Serine/threonine-protein kinase 2) (STE20-related kinase SMAK) (Etk4) Length = 1233 Score = 30.4 bits (67), Expect = 4.6 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = -3 Query: 462 LSDPEDEQLQGMMREI---RLKFSVITGSLGAKLGYEGRPTSSEQDIEDM*LV*NYRKVP 292 L PE ++++ + L+ V+TG+ LG EG ++E D+E N +KVP Sbjct: 631 LEQPETDEVEQVSESNSIEELERLVVTGAEARALGSEGEAAATEVDLERK---ENAQKVP 687 Query: 291 CGIKSQSP 268 +SQ+P Sbjct: 688 VKAESQAP 695
>YN00_YEAST (P53846) Hypothetical 23.3 kDa protein in ORC5-ATX1 intergenic| region Length = 198 Score = 30.0 bits (66), Expect = 6.0 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 2/106 (1%) Frame = -3 Query: 633 EGRQVGLKNGFQVGEELGFYQGCLDVWMSIIRLDQDAFSARVRKYIEQLAALVSNYPLSD 454 EG+Q GL+ GFQ LG +G DV S S + K I + L+ +++ Sbjct: 68 EGKQYGLQVGFQRFTLLGQMEGLCDVIES-----YGLHSPTLEKNIHTIRTLMKGLKMNN 122 Query: 453 PEDE--QLQGMMREIRLKFSVITGSLGAKLGYEGRPTSSEQDIEDM 322 ++ + + ++ +++ KF I +L + + PT + + ED+ Sbjct: 123 DDESVMEFERVLIKLKNKFRTILITLHRLVKDKRTPTVTFEVFEDV 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,652,003 Number of Sequences: 219361 Number of extensions: 1833012 Number of successful extensions: 4717 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4564 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4708 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)