ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104144.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
2dbj|AK060098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
3dbj|AK059861.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
4dbj|AK059321.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
5gb|AY107133.1| Zea mays PCO086632 mRNA sequence 84 6e-13
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 78 4e-11
8emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb... 78 4e-11
9dbj|AK104250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
10dbj|AK104179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
11dbj|AK104015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
12dbj|AK059969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
13gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome... 70 9e-09
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 70 9e-09
15gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 70 9e-09
16dbj|AK059747.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
17emb|CR555306.1| Azoarcus sp. EbN1 complete genome 44 0.53
18dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
19dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.1
20dbj|AK120395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
21dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
22dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
23gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold 40 8.3
24gb|AC165380.3| Colobus guereza clone CH272-85C5, complete sequence 40 8.3
25gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 8.3
26ref|XM_360206.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.3
27gb|DQ491002.1| Paramecium bursaria Chlorella virus NY2A Chlorell... 40 8.3
28gb|AC087214.4| Papio anubis clone RP41-150K7, complete sequence 40 8.3
29gb|AY224382.1| Bacillus cereus strain BGSC 6A5 rrnE operon, comp... 40 8.3
30gb|AC148058.4| Callicebus moloch clone LB5-358H21, complete sequ... 40 8.3
31gb|AC175615.3| Nomascus leucogenys leucogenys clone CH271-480C7,... 40 8.3
32gb|AC182351.3| Ateles geoffroyi clone UC1-76C3, complete sequence 40 8.3
33emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome... 40 8.3
34emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 8.3
35dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.3
36gb|DP000005.1| Macaca mulatta target 1 genomic scaffold 40 8.3
37gb|AC146925.5| Callithrix jacchus clone CH259-254J2, complete se... 40 8.3
38gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 40 8.3
39gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold 40 8.3
40gb|AC151472.2| Mus musculus BAC clone RP23-407N2 from chromosome... 40 8.3
41gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.3
42gb|AC074362.5| Homo sapiens BAC clone RP11-1C10 from 2, complete... 40 8.3
43gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, comple... 40 8.3
44gb|AC151365.3| Macaca mulatta clone CH250-345I13, complete sequence 40 8.3
45gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 8.3
46gb|AC152894.3| Saimiri boliviensis boliviensis clone CH254-450C1... 40 8.3
47gb|AC151371.4| Aotus nancymaae clone CH258-333O11, complete sequ... 40 8.3
48gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 40 8.3
49gb|AC151373.4| Aotus nancymaae clone CH258-480P12, complete sequ... 40 8.3
50emb|AL831718.6| Mouse DNA sequence from clone RP23-146O20 on chr... 40 8.3
51gb|AC138724.3| Cercopithecus aethiops clone CH252-200P12, comple... 40 8.3 
>dbj|AK104144.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A12, full
           insert sequence
          Length = 997

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 358 cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
           ||||||||| | ||||||||| || ||||| |||| ||| || |||| ||||||||| ||
Sbjct: 621 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaggctcccctc 562

                                                     
Query: 418 cttcttctccagccgagcgtgcaccccagaaactgtcgcgac 459
            |||||||||||||| ||||||  |||||||||||| |||||
Sbjct: 561 tttcttctccagccgtgcgtgcgtcccagaaactgttgcgac 520



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 74/88 (84%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                       
Query: 510 cggatgcgatctcgatggcgccgggccgggcgacgcggtagcccgatgtgtttccagtcg 569
           ||||||| |||| || | ||||||| || ||||||||||| |||||| ||   ||| |||
Sbjct: 466 cggatgctatctggaagccgccgggtcgtgcgacgcggta-cccgatatgacgccaatcg 408

                                       
Query: 570 ccgtctcctgcgggctcaagaatccatc 597
           ||||||||||| |||||||||| |||||
Sbjct: 407 ccgtctcctgcaggctcaagaacccatc 380
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>dbj|AK060098.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G12, full
           insert sequence
          Length = 1024

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 358 cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
           ||||||||| | ||||||||| || ||||| |||| ||| || |||| ||||||||| ||
Sbjct: 579 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaggctcccctc 520

                                                     
Query: 418 cttcttctccagccgagcgtgcaccccagaaactgtcgcgac 459
            |||||||||||||| ||||||  |||||||||||| |||||
Sbjct: 519 tttcttctccagccgtgcgtgcgtcccagaaactgttgcgac 478



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 74/88 (84%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                       
Query: 510 cggatgcgatctcgatggcgccgggccgggcgacgcggtagcccgatgtgtttccagtcg 569
           ||||||| |||| || | ||||||| || ||||||||||| |||||| ||   ||| |||
Sbjct: 424 cggatgctatctggaagccgccgggtcgtgcgacgcggta-cccgatatgacgccaatcg 366

                                       
Query: 570 ccgtctcctgcgggctcaagaatccatc 597
           ||||||||||| |||||||||| |||||
Sbjct: 365 ccgtctcctgcaggctcaagaacccatc 338
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>dbj|AK059861.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-C05, full
           insert sequence
          Length = 937

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 358 cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
           ||||||||| | ||||||||| || ||||| |||| ||| || |||| ||||||||| ||
Sbjct: 675 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaggctcccctc 616

                                                     
Query: 418 cttcttctccagccgagcgtgcaccccagaaactgtcgcgac 459
            |||||||||||||| ||||||  |||||||||||| |||||
Sbjct: 615 tttcttctccagccgtgcgtgcgtcccagaaactgttgcgac 574



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 74/88 (84%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                       
Query: 510 cggatgcgatctcgatggcgccgggccgggcgacgcggtagcccgatgtgtttccagtcg 569
           ||||||| |||| || | ||||||| || ||||||||||| |||||| ||   ||| |||
Sbjct: 520 cggatgctatctggaagccgccgggtcgtgcgacgcggta-cccgatatgacgccaatcg 462

                                       
Query: 570 ccgtctcctgcgggctcaagaatccatc 597
           ||||||||||| |||||||||| |||||
Sbjct: 461 ccgtctcctgcaggctcaagaacccatc 434
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>dbj|AK059321.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H08, full
           insert sequence
          Length = 974

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 358 cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
           ||||||||| | ||||||||| || ||||| |||| ||| || |||| ||||||||| ||
Sbjct: 532 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaggctcccctc 473

                                                     
Query: 418 cttcttctccagccgagcgtgcaccccagaaactgtcgcgac 459
            |||||||||||||| ||||||  |||||||||||| |||||
Sbjct: 472 tttcttctccagccgtgcgtgcgtcccagaaactgttgcgac 431



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 74/88 (84%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                       
Query: 510 cggatgcgatctcgatggcgccgggccgggcgacgcggtagcccgatgtgtttccagtcg 569
           ||||||| |||| || | ||||||| || ||||||||||| |||||| ||   ||| |||
Sbjct: 377 cggatgctatctggaagccgccgggtcgcgcgacgcggta-cccgatatgacgccaatcg 319

                                       
Query: 570 ccgtctcctgcgggctcaagaatccatc 597
           ||||||||||| |||||||||| |||||
Sbjct: 318 ccgtctcctgcaggctcaagaacccatc 291
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>gb|AY107133.1| Zea mays PCO086632 mRNA sequence
          Length = 817

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 120/146 (82%)
 Strand = Plus / Plus

                                                                       
Query: 266 gtcttcctaacccgaaacattgccaagtggatgtcaccgaagatgagcaggctcccgggt 325
           |||||||| || || ||||| |||||||||||||||||||||||||| ||||| ||||| 
Sbjct: 664 gtcttccttacacggaacatggccaagtggatgtcaccgaagatgagtaggctgccgggg 723

                                                                       
Query: 326 tggacggcgactgggaatcccggcaccagcttcctctcgttaacgtaggtgccgttggtg 385
           | |||||   | ||||| |||||    |||   | |||||| | ||||||||||||||||
Sbjct: 724 tcgacggacgcggggaagcccgggttgagccggcgctcgttgatgtaggtgccgttggtg 783

                                     
Query: 386 ctgtccatgtccgtaaccaccaggct 411
           ||||||| |||||| |||| ||||||
Sbjct: 784 ctgtccaggtccgtcaccagcaggct 809
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 358     cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
               ||||||||| | ||||||||| || ||||| |||| ||| || |||| ||||||||| ||
Sbjct: 1156791 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaggctcccctc 1156732

                                                  
Query: 418     cttcttctccagccgagcgtgcaccccagaaactg 452
                |||||||||||||| ||||||  |||||||||||
Sbjct: 1156731 tttcttctccagccgtgcgtgcgtcccagaaactg 1156697
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 358     cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
               ||||||||| | ||||||||| || ||||| |||| ||| || |||| ||||||||| ||
Sbjct: 1156791 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaggctcccctc 1156732

                                                  
Query: 418     cttcttctccagccgagcgtgcaccccagaaactg 452
                |||||||||||||| ||||||  |||||||||||
Sbjct: 1156731 tttcttctccagccgtgcgtgcgtcccagaaactg 1156697
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>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 358   cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
             ||||||||| | ||||||||| || ||||| |||| ||| || |||| ||||||||| ||
Sbjct: 95774 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaggctcccctc 95715

                                                
Query: 418   cttcttctccagccgagcgtgcaccccagaaactg 452
              |||||||||||||| ||||||  |||||||||||
Sbjct: 95714 tttcttctccagccgtgcgtgcgtcccagaaactg 95680
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>dbj|AK104250.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H05, full
           insert sequence
          Length = 979

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 86/102 (84%)
 Strand = Plus / Minus

                                                                       
Query: 358 cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
           ||||||||| | ||||||||| || ||||| |||| ||| || |||| || |||||| ||
Sbjct: 547 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaagctcccctc 488

                                                     
Query: 418 cttcttctccagccgagcgtgcaccccagaaactgtcgcgac 459
            |||||||||||||| ||||||  |||||||||||| |||||
Sbjct: 487 tttcttctccagccgtgcgtgcgtcccagaaactgttgcgac 446



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 281 aacattgccaagtggatgtcaccgaagatgagcaggctcccggg 324
           ||||| |||| |||||||||||| |||||||| ||||| |||||
Sbjct: 624 aacatggccaggtggatgtcaccaaagatgaggaggctgccggg 581



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 73/88 (82%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                       
Query: 510 cggatgcgatctcgatggcgccgggccgggcgacgcggtagcccgatgtgtttccagtcg 569
           ||||||| |||| || | ||||||| || ||||||||||| |||||| ||   ||| |||
Sbjct: 392 cggatgctatctggaagccgccgggtcgtgcgacgcggta-cccgatatgacgccaatcg 334

                                       
Query: 570 ccgtctcctgcgggctcaagaatccatc 597
           ||||||||||| ||||| |||| |||||
Sbjct: 333 ccgtctcctgcaggctcgagaacccatc 306
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>dbj|AK104179.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G06, full
           insert sequence
          Length = 974

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 86/102 (84%)
 Strand = Plus / Minus

                                                                       
Query: 358 cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
           ||||||||| | ||||||||| || ||||| |||| ||| || |||| || |||||| ||
Sbjct: 598 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaagctcccctc 539

                                                     
Query: 418 cttcttctccagccgagcgtgcaccccagaaactgtcgcgac 459
            |||||||||||||| ||||||  |||||||||||| |||||
Sbjct: 538 tttcttctccagccgtgcgtgcgtcccagaaactgttgcgac 497



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 281 aacattgccaagtggatgtcaccgaagatgagcaggctcccggg 324
           ||||| |||| |||||||||||| |||||||| ||||| |||||
Sbjct: 675 aacatggccaggtggatgtcaccaaagatgaggaggctgccggg 632



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 73/88 (82%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                       
Query: 510 cggatgcgatctcgatggcgccgggccgggcgacgcggtagcccgatgtgtttccagtcg 569
           ||||||| |||| || | ||||||| || ||||||||||| |||||| ||   ||| |||
Sbjct: 443 cggatgctatctggaagccgccgggtcgtgcgacgcggta-cccgatatgacgccaatcg 385

                                       
Query: 570 ccgtctcctgcgggctcaagaatccatc 597
           ||||||||||| ||||| |||| |||||
Sbjct: 384 ccgtctcctgcaggctcgagaacccatc 357
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>dbj|AK104015.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F09, full
           insert sequence
          Length = 969

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 86/102 (84%)
 Strand = Plus / Minus

                                                                       
Query: 358 cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
           ||||||||| | ||||||||| || ||||| |||| ||| || |||| || |||||| ||
Sbjct: 547 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaagctcccctc 488

                                                     
Query: 418 cttcttctccagccgagcgtgcaccccagaaactgtcgcgac 459
            |||||||||||||| ||||||  |||||||||||| |||||
Sbjct: 487 tttcttctccagccgtgcgtgcgtcccagaaactgttgcgac 446



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 281 aacattgccaagtggatgtcaccgaagatgagcaggctcccggg 324
           ||||| |||| |||||||||||| |||||||| ||||| |||||
Sbjct: 624 aacatggccaggtggatgtcaccaaagatgaggaggctgccggg 581



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 73/88 (82%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                       
Query: 510 cggatgcgatctcgatggcgccgggccgggcgacgcggtagcccgatgtgtttccagtcg 569
           ||||||| |||| || | ||||||| || ||||||||||| |||||| ||   ||| |||
Sbjct: 392 cggatgctatctggaagccgccgggtcgtgcgacgcggta-cccgatatgacgccaatcg 334

                                       
Query: 570 ccgtctcctgcgggctcaagaatccatc 597
           ||||||||||| ||||| |||| |||||
Sbjct: 333 ccgtctcctgcaggctcgagaacccatc 306
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>dbj|AK059969.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-G08, full
           insert sequence
          Length = 1048

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 86/102 (84%)
 Strand = Plus / Minus

                                                                       
Query: 358 cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
           ||||||||| | ||||||||| || ||||| |||| ||| || |||| || |||||| ||
Sbjct: 604 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaagctcccctc 545

                                                     
Query: 418 cttcttctccagccgagcgtgcaccccagaaactgtcgcgac 459
            |||||||||||||| ||||||  |||||||||||| |||||
Sbjct: 544 tttcttctccagccgtgcgtgcgtcccagaaactgttgcgac 503



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 281 aacattgccaagtggatgtcaccgaagatgagcaggctcccggg 324
           ||||| |||| |||||||||||| |||||||| ||||| |||||
Sbjct: 681 aacatggccaggtggatgtcaccaaagatgaggaggctgccggg 638



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 73/88 (82%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                       
Query: 510 cggatgcgatctcgatggcgccgggccgggcgacgcggtagcccgatgtgtttccagtcg 569
           ||||||| |||| || | ||||||| || ||||||||||| |||||| ||   ||| |||
Sbjct: 449 cggatgctatctggaagccgccgggtcgtgcgacgcggta-cccgatatgacgccaatcg 391

                                       
Query: 570 ccgtctcctgcgggctcaagaatccatc 597
           ||||||||||| ||||| |||| |||||
Sbjct: 390 ccgtctcctgcaggctcgagaacccatc 363
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>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15,
              complete sequence
          Length = 147941

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                          
Query: 358    cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
              ||||||||| | ||||||||| || ||||| |||| ||| || |||| || |||||| ||
Sbjct: 108221 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaagctcccctc 108280

                                                 
Query: 418    cttcttctccagccgagcgtgcaccccagaaactg 452
               |||||||||||||| ||||||  |||||||||||
Sbjct: 108281 tttcttctccagccgtgcgtgcgtcccagaaactg 108315
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                           
Query: 358     cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
               ||||||||| | ||||||||| || ||||| |||| ||| || |||| || |||||| ||
Sbjct: 1282394 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaagctcccctc 1282335

                                                  
Query: 418     cttcttctccagccgagcgtgcaccccagaaactg 452
                |||||||||||||| ||||||  |||||||||||
Sbjct: 1282334 tttcttctccagccgtgcgtgcgtcccagaaactg 1282300
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                           
Query: 358     cctctcgttaacgtaggtgccgttggtgctgtccatgtccgtaaccaccaggctcccatc 417
               ||||||||| | ||||||||| || ||||| |||| ||| || |||| || |||||| ||
Sbjct: 1280115 cctctcgttgatgtaggtgccattcgtgctctccaggtctgttaccaacaagctcccctc 1280056

                                                  
Query: 418     cttcttctccagccgagcgtgcaccccagaaactg 452
                |||||||||||||| ||||||  |||||||||||
Sbjct: 1280055 tttcttctccagccgtgcgtgcgtcccagaaactg 1280021
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>dbj|AK059747.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A02, full
           insert sequence
          Length = 923

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 74/88 (84%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                       
Query: 510 cggatgcgatctcgatggcgccgggccgggcgacgcggtagcccgatgtgtttccagtcg 569
           ||||||| |||| || | ||||||| || ||||||||||| |||||| ||   ||| |||
Sbjct: 365 cggatgctatctggaagccgccgggtcgtgcgacgcggta-cccgatatgacgccaatcg 307

                                       
Query: 570 ccgtctcctgcgggctcaagaatccatc 597
           ||||||||||| |||||||||| |||||
Sbjct: 306 ccgtctcctgcaggctcaagaacccatc 279
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 368     acgtaggtgccgttggtgctgt 389
               ||||||||||||||||||||||
Sbjct: 2457639 acgtaggtgccgttggtgctgt 2457618
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 526     ggcgccgggccgggcgacgcg 546
               |||||||||||||||||||||
Sbjct: 7533461 ggcgccgggccgggcgacgcg 7533441
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 369     cgtaggtgccgttggtgctgt 389
               |||||||||||||||||||||
Sbjct: 1450562 cgtaggtgccgttggtgctgt 1450582
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>dbj|AK120395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075G01, full
            insert sequence
          Length = 3213

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 526  ggcgccgggccgggcgacgcg 546
            |||||||||||||||||||||
Sbjct: 2597 ggcgccgggccgggcgacgcg 2617
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>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0061L20
          Length = 138926

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 526    ggcgccgggccgggcgacgcg 546
              |||||||||||||||||||||
Sbjct: 111775 ggcgccgggccgggcgacgcg 111755
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>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0407H12
          Length = 167754

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 526   ggcgccgggccgggcgacgcg 546
             |||||||||||||||||||||
Sbjct: 38871 ggcgccgggccgggcgacgcg 38851
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>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold
          Length = 1952403

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    ccaggctcccatccttcttctcca 428
              |||||||||||||||||| |||||
Sbjct: 721922 ccaggctcccatccttctactcca 721945
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>gb|AC165380.3| Colobus guereza clone CH272-85C5, complete sequence
          Length = 199248

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    ccaggctcccatccttcttctcca 428
              |||||||||||||||||| |||||
Sbjct: 116153 ccaggctcccatccttctactcca 116176
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 528     cgccgggccgggcgacgcgg 547
               ||||||||||||||||||||
Sbjct: 2596299 cgccgggccgggcgacgcgg 2596318
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>ref|XM_360206.1| Magnaporthe grisea 70-15 hypothetical protein (MG05580.4) partial
            mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 519  tctcgatggcgccgggccgg 538
            ||||||||||||||||||||
Sbjct: 1201 tctcgatggcgccgggccgg 1182
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>gb|DQ491002.1| Paramecium bursaria Chlorella virus NY2A Chlorella virus NY2A ctg_13
              genomic sequence
          Length = 368683

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    aacccgaaacattgccaagt 293
              ||||||||||||||||||||
Sbjct: 281257 aacccgaaacattgccaagt 281276
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>gb|AC087214.4| Papio anubis clone RP41-150K7, complete sequence
          Length = 141415

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   ccaggctcccatccttcttctcca 428
             |||||||||||||||||| |||||
Sbjct: 42790 ccaggctcccatccttctactcca 42813
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>gb|AY224382.1| Bacillus cereus strain BGSC 6A5 rrnE operon, complete sequence
          Length = 7685

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 71  tgttgaaaatttctcttactcgta 94
           |||| |||||||||||||||||||
Sbjct: 321 tgtttaaaatttctcttactcgta 344
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>gb|AC148058.4| Callicebus moloch clone LB5-358H21, complete sequence
          Length = 151378

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   ccaggctcccatccttcttctcca 428
             |||||||||||||||||| |||||
Sbjct: 34335 ccaggctcccatccttctactcca 34358
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>gb|AC175615.3| Nomascus leucogenys leucogenys clone CH271-480C7, complete sequence
          Length = 165598

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    ccaggctcccatccttcttctcca 428
              |||||||||||||||||| |||||
Sbjct: 117451 ccaggctcccatccttctactcca 117474
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>gb|AC182351.3| Ateles geoffroyi clone UC1-76C3, complete sequence
          Length = 212614

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   ccaggctcccatccttcttctcca 428
             |||||||||||||||||| |||||
Sbjct: 90999 ccaggctcccatccttctactcca 91022
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>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13
          Length = 348247

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 528    cgccgggccgggcgacgcgg 547
              ||||||||||||||||||||
Sbjct: 175615 cgccgggccgggcgacgcgg 175634
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>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             9/14
          Length = 306550

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   cgccgggccgggcgacgcgg 547
             ||||||||||||||||||||
Sbjct: 67049 cgccgggccgggcgacgcgg 67068
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    tcggcttcctgctggtcatc 234
              ||||||||||||||||||||
Sbjct: 159988 tcggcttcctgctggtcatc 159969
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>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    ccaggctcccatccttcttctcca 428
              |||||||||||||||||| |||||
Sbjct: 596708 ccaggctcccatccttctactcca 596731
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>gb|AC146925.5| Callithrix jacchus clone CH259-254J2, complete sequence
          Length = 160998

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    ccaggctcccatccttcttctcca 428
              |||||||||||||||||| |||||
Sbjct: 101385 ccaggctcccatccttctactcca 101408
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    ccaggctcccatccttcttctcca 428
              |||||||||||||||||| |||||
Sbjct: 620029 ccaggctcccatccttctactcca 620052
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>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold
          Length = 1819346

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    ccaggctcccatccttcttctcca 428
              |||||||||||||||||| |||||
Sbjct: 553686 ccaggctcccatccttctactcca 553709
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>gb|AC151472.2| Mus musculus BAC clone RP23-407N2 from chromosome 7, complete sequence
          Length = 196583

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    tgctggtcatctttgctggc 243
              ||||||||||||||||||||
Sbjct: 107012 tgctggtcatctttgctggc 107031
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 528     cgccgggccgggcgacgcgg 547
               ||||||||||||||||||||
Sbjct: 1074951 cgccgggccgggcgacgcgg 1074932
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>gb|AC074362.5| Homo sapiens BAC clone RP11-1C10 from 2, complete sequence
          Length = 149705

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    accaccaggctcccatcctt 420
              ||||||||||||||||||||
Sbjct: 116978 accaccaggctcccatcctt 116997
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>gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, complete sequence
          Length = 171846

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     agctgttgaaaatttctctt 87
              ||||||||||||||||||||
Sbjct: 104278 agctgttgaaaatttctctt 104297
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>gb|AC151365.3| Macaca mulatta clone CH250-345I13, complete sequence
          Length = 40673

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   ccaggctcccatccttcttctcca 428
             |||||||||||||||||| |||||
Sbjct: 34990 ccaggctcccatccttctactcca 35013
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     tgttgaaaatttctcttactcgta 94
              |||| |||||||||||||||||||
Sbjct: 150485 tgtttaaaatttctcttactcgta 150508
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>gb|AC152894.3| Saimiri boliviensis boliviensis clone CH254-450C11, complete sequence
          Length = 167306

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   ccaggctcccatccttcttctcca 428
             |||||||||||||||||| |||||
Sbjct: 39813 ccaggctcccatccttctactcca 39836
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>gb|AC151371.4| Aotus nancymaae clone CH258-333O11, complete sequence
          Length = 103418

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   ccaggctcccatccttcttctcca 428
             |||||||||||||||||| |||||
Sbjct: 14616 ccaggctcccatccttctactcca 14639
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>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    ccaggctcccatccttcttctcca 428
              |||||||||||||||||| |||||
Sbjct: 701212 ccaggctcccatccttctactcca 701235
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>gb|AC151373.4| Aotus nancymaae clone CH258-480P12, complete sequence
          Length = 171933

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    ccaggctcccatccttcttctcca 428
              |||||||||||||||||| |||||
Sbjct: 151031 ccaggctcccatccttctactcca 151054
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>emb|AL831718.6| Mouse DNA sequence from clone RP23-146O20 on chromosome X, complete
             sequence
          Length = 116076

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   ccaggctcccatccttcttctcca 428
             |||||||||||||| |||||||||
Sbjct: 54611 ccaggctcccatccatcttctcca 54634
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>gb|AC138724.3| Cercopithecus aethiops clone CH252-200P12, complete sequence
          Length = 173770

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   ccaggctcccatccttcttctcca 428
             |||||||||||||||||| |||||
Sbjct: 92896 ccaggctcccatccttctactcca 92919


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,709,842
Number of Sequences: 3902068
Number of extensions: 3709842
Number of successful extensions: 66244
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65495
Number of HSP's gapped (non-prelim): 734
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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