| Clone Name | rbags21f03 |
|---|---|
| Clone Library Name | barley_pub |
>RL27C_ARATH (P49637) 60S ribosomal protein L27a-3| Length = 146 Score = 122 bits (306), Expect(2) = 1e-49 Identities = 52/55 (94%), Positives = 54/55 (98%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 MTTR KKNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGMHHHRILFDKYHPGYFG+ Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 55 Score = 94.4 bits (233), Expect(2) = 1e-49 Identities = 43/69 (62%), Positives = 55/69 (79%), Gaps = 1/69 (1%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGM 253 GKVGMRYFHKL N+F+ P VN+++LWS+VP D A++ D P++DV+Q G+FKVLGKG Sbjct: 54 GKVGMRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGH 113 Query: 252 LPE-KPIVV 229 LPE KP VV Sbjct: 114 LPENKPFVV 122
>RL27A_ARATH (Q9LR33) 60S ribosomal protein L27a-2| Length = 146 Score = 119 bits (299), Expect(2) = 4e-49 Identities = 51/55 (92%), Positives = 53/55 (96%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M T LKKNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGMHHHRILFDKYHPGYFG+ Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 55 Score = 95.1 bits (235), Expect(2) = 4e-49 Identities = 43/69 (62%), Positives = 55/69 (79%), Gaps = 1/69 (1%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGM 253 GKVGMRYFHKL N+F+ P VN+++LWS+VP D A++ D P++DV+Q G+FKVLGKG Sbjct: 54 GKVGMRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGH 113 Query: 252 LPE-KPIVV 229 LPE KP VV Sbjct: 114 LPENKPFVV 122
>RL27A_OSCBR (O01358) 60S ribosomal protein L27a (Ribosomal protein RPL-27)| Length = 145 Score = 100 bits (249), Expect(2) = 7e-42 Identities = 43/55 (78%), Positives = 46/55 (83%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M L+K RK RGHVS GHGR+GKHRKHPGGRGNAGG HHHRI DKYHPGYFG+ Sbjct: 1 MAHSLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGK 55 Score = 90.1 bits (222), Expect(2) = 7e-42 Identities = 38/68 (55%), Positives = 52/68 (76%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGM 253 GKVGMR FH N Y PTVNV+RLW++VP ++ + +KAPV+D + GYFKVLGKG+ Sbjct: 54 GKVGMRVFHLNKNHHYCPTVNVDRLWALVPEEQKTKVSAEKAPVIDCVKAGYFKVLGKGL 113 Query: 252 LPEKPIVV 229 LP++P++V Sbjct: 114 LPKQPLIV 121
>RL27A_RAT (P18445) 60S ribosomal protein L27a| Length = 147 Score = 107 bits (267), Expect(2) = 1e-39 Identities = 45/53 (84%), Positives = 49/53 (92%) Frame = -2 Query: 586 TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 +RL+K RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYHPGYFG+ Sbjct: 2 SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGK 54 Score = 75.9 bits (185), Expect(2) = 1e-39 Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 3/71 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLG 262 GKVGMR++H N+ + PTVN+++LW++V A +K AP++DV + GY+KVLG Sbjct: 53 GKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLG 112 Query: 261 KGMLPEKPIVV 229 KG LP++P++V Sbjct: 113 KGKLPKQPVIV 123
>RL27A_ERYGR (P78987) 60S ribosomal protein L27a (L29)| Length = 149 Score = 101 bits (251), Expect(2) = 2e-39 Identities = 44/55 (80%), Positives = 45/55 (81%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M T L K RK RGHVSAGHGRVGKHRKHPGGRG AGG HHHR DKYHPGYFG+ Sbjct: 1 MPTHLSKTRKHRGHVSAGHGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGK 55 Score = 80.9 bits (198), Expect(2) = 2e-39 Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 4/72 (5%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDK----AAEAGGDKAPVVDVSQFGYFKVL 265 GKVGMRYFHK N F+ P +N+E+LWS++P++K + D PV+D+ GY KVL Sbjct: 54 GKVGMRYFHKQGNHFWKPVLNLEKLWSLIPAEKREAYLSSTNPDVIPVIDLLPLGYSKVL 113 Query: 264 GKGMLPEKPIVV 229 GKG +P+ P+VV Sbjct: 114 GKGRIPKVPLVV 125
>RL27A_PONPY (Q5REY2) 60S ribosomal protein L27a| Length = 147 Score = 106 bits (264), Expect(2) = 5e-39 Identities = 44/53 (83%), Positives = 49/53 (92%) Frame = -2 Query: 586 TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 +RL+K RK RGHVS GHGR+GKHRKHPGGRGNAGG+HHHRI FDKYHPGYFG+ Sbjct: 2 SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGK 54 Score = 74.7 bits (182), Expect(2) = 5e-39 Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 3/71 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLG 262 GKVGM+++H N+ + PTVN+++LW++V A +K AP++DV + GY+KVLG Sbjct: 53 GKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLG 112 Query: 261 KGMLPEKPIVV 229 KG LP++P++V Sbjct: 113 KGKLPKQPVIV 123
>RL27A_PANTR (Q5R1X0) 60S ribosomal protein L27a| Length = 147 Score = 106 bits (264), Expect(2) = 5e-39 Identities = 44/53 (83%), Positives = 49/53 (92%) Frame = -2 Query: 586 TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 +RL+K RK RGHVS GHGR+GKHRKHPGGRGNAGG+HHHRI FDKYHPGYFG+ Sbjct: 2 SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGK 54 Score = 74.7 bits (182), Expect(2) = 5e-39 Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 3/71 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLG 262 GKVGM+++H N+ + PTVN+++LW++V A +K AP++DV + GY+KVLG Sbjct: 53 GKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLG 112 Query: 261 KGMLPEKPIVV 229 KG LP++P++V Sbjct: 113 KGKLPKQPVIV 123
>RL27A_HUMAN (P46776) 60S ribosomal protein L27a| Length = 147 Score = 106 bits (264), Expect(2) = 5e-39 Identities = 44/53 (83%), Positives = 49/53 (92%) Frame = -2 Query: 586 TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 +RL+K RK RGHVS GHGR+GKHRKHPGGRGNAGG+HHHRI FDKYHPGYFG+ Sbjct: 2 SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGK 54 Score = 74.7 bits (182), Expect(2) = 5e-39 Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 3/71 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLG 262 GKVGM+++H N+ + PTVN+++LW++V A +K AP++DV + GY+KVLG Sbjct: 53 GKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLG 112 Query: 261 KGMLPEKPIVV 229 KG LP++P++V Sbjct: 113 KGKLPKQPVIV 123
>RL27A_MOUSE (P14115) 60S ribosomal protein L27a (L29)| Length = 147 Score = 107 bits (267), Expect(2) = 7e-39 Identities = 45/53 (84%), Positives = 49/53 (92%) Frame = -2 Query: 586 TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 +RL+K RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYHPGYFG+ Sbjct: 2 SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGK 54 Score = 73.2 bits (178), Expect(2) = 7e-39 Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 3/71 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLG 262 GKVGMR++H N+ + PTVN+++ W++V A +K AP++DV + GY+KVLG Sbjct: 53 GKVGMRHYHLKRNQSFCPTVNLDKPWTLVSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLG 112 Query: 261 KGMLPEKPIVV 229 KG LP++P++V Sbjct: 113 KGKLPKQPVIV 123
>RL27A_DICDI (P48160) 60S ribosomal protein L27a| Length = 148 Score = 99.4 bits (246), Expect(2) = 2e-38 Identities = 43/55 (78%), Positives = 47/55 (85%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M TR K+RK RG V AG+GRVGKHRKHPGGRGNAGG+ HHRI FDKYHPGYFG+ Sbjct: 1 MPTRFSKHRKSRGDVCAGYGRVGKHRKHPGGRGNAGGLTHHRINFDKYHPGYFGK 55 Score = 79.7 bits (195), Expect(2) = 2e-38 Identities = 38/71 (53%), Positives = 55/71 (77%), Gaps = 3/71 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSD--KAAEAGGD-KAPVVDVSQFGYFKVLG 262 GK+GMR+FH L N+++ PTV++E++W++VP K+ A D APVVDV+Q G+FKVLG Sbjct: 54 GKLGMRHFHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLG 113 Query: 261 KGMLPEKPIVV 229 G+LP +PI+V Sbjct: 114 HGILPTQPIIV 124
>RL27A_DROME (P41092) 60S ribosomal protein L27a| Length = 149 Score = 104 bits (260), Expect(2) = 3e-38 Identities = 44/50 (88%), Positives = 46/50 (92%) Frame = -2 Query: 577 KKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 KK RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYHPGYFG+ Sbjct: 7 KKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGK 56 Score = 73.9 bits (180), Expect(2) = 3e-38 Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 3/71 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK---APVVDVSQFGYFKVLG 262 GKVGMR FH + P +N+++LWS+V ++K AE +K APV+D+ +FGY+K+LG Sbjct: 55 GKVGMRNFHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLG 114 Query: 261 KGMLPEKPIVV 229 +G LP +P++V Sbjct: 115 RGHLPARPVIV 125
>RL27A_XENLA (P47830) 60S ribosomal protein L27a (L22)| Length = 147 Score = 106 bits (264), Expect(2) = 3e-37 Identities = 44/53 (83%), Positives = 49/53 (92%) Frame = -2 Query: 586 TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 ++L+K RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYHPGYFG+ Sbjct: 2 SKLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGK 54 Score = 68.9 bits (167), Expect(2) = 3e-37 Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 3/71 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSD---KAAEAGGDKAPVVDVSQFGYFKVLG 262 GKVGMR++H N+ + PT+N+++LW++V A+ AP++D GY+KVLG Sbjct: 53 GKVGMRHYHLKKNQSFCPTINLDKLWTLVSEQTRLNHAKNLEGPAPIIDAVHAGYYKVLG 112 Query: 261 KGMLPEKPIVV 229 KG LP++P++V Sbjct: 113 KGKLPKQPVIV 123
>RL28_NEUCR (P08978) 60S ribosomal protein L28 (L27A) (L29) (CRP1)| Length = 149 Score = 98.6 bits (244), Expect(2) = 8e-37 Identities = 43/55 (78%), Positives = 44/55 (80%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M TR K RK RGHVSAG GRVGKHRKHPGGRG AGG HHHR DKYHPGYFG+ Sbjct: 1 MPTRFSKTRKHRGHVSAGKGRVGKHRKHPGGRGMAGGQHHHRTNLDKYHPGYFGK 55 Score = 75.1 bits (183), Expect(2) = 8e-37 Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 4/72 (5%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDK----AAEAGGDKAPVVDVSQFGYFKVL 265 GKVGMR+FH L N + P +N+E+LW++VP++ + A + APV+D+ GY K+L Sbjct: 54 GKVGMRHFHLLRNHQWAPILNIEKLWTLVPAEAREKYVSGAATETAPVIDLLSHGYAKLL 113 Query: 264 GKGMLPEKPIVV 229 GKG LP+ PIVV Sbjct: 114 GKGRLPQVPIVV 125
>RL28A_SCHPO (P36585) 60S ribosomal protein L28-A (L27A) (L29)| Length = 148 Score = 95.9 bits (237), Expect(2) = 1e-36 Identities = 41/55 (74%), Positives = 45/55 (81%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M T + K RK RGHVSAGHGR+GKHRKHPGGRG AGG+ H R FDKYHPGYFG+ Sbjct: 1 MPTHVSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGK 55 Score = 77.4 bits (189), Expect(2) = 1e-36 Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 3/71 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPS---DKAAEAGGDKAPVVDVSQFGYFKVLG 262 GKVGMR FH + N + PTVN++RLW+++P+ DK + APV++V Q GY KVLG Sbjct: 54 GKVGMRRFHLMKNPLWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQSGYGKVLG 113 Query: 261 KGMLPEKPIVV 229 KG LPE P++V Sbjct: 114 KGRLPETPVIV 124
>RL28_YEAST (P02406) 60S ribosomal protein L28 (L27A) (L29) (YL24) (RP62)| Length = 148 Score = 95.9 bits (237), Expect(2) = 2e-36 Identities = 41/53 (77%), Positives = 44/53 (83%) Frame = -2 Query: 586 TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 +R K RK RGHVSAG GR+GKHRKHPGGRG AGG HHHRI DKYHPGYFG+ Sbjct: 2 SRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGEHHHRINMDKYHPGYFGK 54 Score = 76.3 bits (186), Expect(2) = 2e-36 Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 4/72 (5%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAE----AGGDKAPVVDVSQFGYFKVL 265 GKVGMRYFHK F+ P +N+++LW+++P DK + A + APV+D GY K+L Sbjct: 53 GKVGMRYFHKQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSASKETAPVIDTLAAGYGKIL 112 Query: 264 GKGMLPEKPIVV 229 GKG +P P++V Sbjct: 113 GKGRIPNVPVIV 124
>RL28B_SCHPO (P57728) 60S ribosomal protein L28-B| Length = 148 Score = 95.1 bits (235), Expect(2) = 5e-36 Identities = 41/55 (74%), Positives = 44/55 (80%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M T K RK RGHVSAGHGR+GKHRKHPGGRG AGG+ H R FDKYHPGYFG+ Sbjct: 1 MPTHTSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGK 55 Score = 75.9 bits (185), Expect(2) = 5e-36 Identities = 35/71 (49%), Positives = 51/71 (71%), Gaps = 3/71 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGG---DKAPVVDVSQFGYFKVLG 262 GKVGMR FH + N + PTVN++RLW++VP++ + G + APV++V Q GY KVLG Sbjct: 54 GKVGMRRFHLMKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLG 113 Query: 261 KGMLPEKPIVV 229 KG LP+ P+++ Sbjct: 114 KGRLPDTPVII 124
>RL27A_EUPCR (P48161) 60S ribosomal protein L27a (L29)| Length = 148 Score = 84.7 bits (208), Expect(2) = 8e-34 Identities = 38/55 (69%), Positives = 41/55 (74%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 MT + RK RGHVS GHGRVGKHRKHPGGRG AG HHHRI KYHPG+ G+ Sbjct: 1 MTHSKRNTRKLRGHVSHGHGRVGKHRKHPGGRGMAGPEHHHRINVFKYHPGHIGK 55 Score = 79.0 bits (193), Expect(2) = 8e-34 Identities = 35/70 (50%), Positives = 53/70 (75%), Gaps = 2/70 (2%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPV--VDVSQFGYFKVLGK 259 GK GMR+FH + N++Y P++N+ +LWS+V ++ +A DK+ V +DV + GY+KVLGK Sbjct: 54 GKHGMRHFHLMRNQYYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGK 113 Query: 258 GMLPEKPIVV 229 G+LPE P+VV Sbjct: 114 GLLPEVPLVV 123
>RL27A_TENMO (Q27021) 60S ribosomal protein L27a| Length = 148 Score = 108 bits (269), Expect(2) = 1e-33 Identities = 46/55 (83%), Positives = 49/55 (89%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M+T KK RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYHPGYFG+ Sbjct: 1 MSTHKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGK 55 Score = 55.1 bits (131), Expect(2) = 1e-33 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPS---DKAAEAGGDKAPVVDVSQFGYFKVLG 262 GK+GMR +H N + P +N+++LW++V K KAPV+D+ + GY+K+LG Sbjct: 54 GKLGMRNYHLRRNSKWAPAINLDKLWTLVSEQTRSKYQNHPEGKAPVIDIVKAGYYKLLG 113 Query: 261 KG 256 KG Sbjct: 114 KG 115
>RL27A_TETTH (Q00454) 60S ribosomal protein L27a (L29)| Length = 149 Score = 90.1 bits (222), Expect(2) = 1e-33 Identities = 41/57 (71%), Positives = 46/57 (80%), Gaps = 2/57 (3%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHP--GGRGNAGGMHHHRILFDKYHPGYFGQ 428 M + LKK RK RGHVS GHGRVGKHRK GGRG AGGMHHHRIL +K+HPGY+G+ Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGK 57 Score = 72.8 bits (177), Expect(2) = 1e-33 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 2/70 (2%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDK--APVVDVSQFGYFKVLGK 259 GK+GMR FH N + P VN+++LWS+V + DK PV+DV++ G+FKVLGK Sbjct: 56 GKLGMRTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGK 115 Query: 258 GMLPEKPIVV 229 G LP +P+VV Sbjct: 116 GRLPNQPVVV 125
>R27A2_ENTHI (Q9BH80) 60S ribosomal protein L27a-2/4| Length = 149 Score = 82.8 bits (203), Expect(2) = 5e-33 Identities = 33/55 (60%), Positives = 42/55 (76%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M TR ++ R++RGHVS G+GR+GKHRK GGRGNAGG HH + F +HP YFG+ Sbjct: 1 MATRFRQTRRRRGHVSMGYGRIGKHRKQRGGRGNAGGQHHRKTWFTTFHPDYFGK 55 Score = 78.2 bits (191), Expect(2) = 5e-33 Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 4/72 (5%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAG----GDKAPVVDVSQFGYFKVL 265 GK GMR FH +N++Y P++NV+ LWS+V D A+ G++ PV+D + GYFKVL Sbjct: 54 GKHGMRVFHLKANKYYCPSINVDSLWSLVGKDVQAQYKNAKVGEEVPVIDCVKHGYFKVL 113 Query: 264 GKGMLPEKPIVV 229 GKG LP++P++V Sbjct: 114 GKGFLPKQPVIV 125
>R27A1_ENTHI (Q9BI06) 60S ribosomal protein L27a-1| Length = 149 Score = 82.8 bits (203), Expect(2) = 6e-33 Identities = 33/55 (60%), Positives = 42/55 (76%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M TR ++ R++RGHVS G+GR+GKHRK GGRGNAGG HH + F +HP YFG+ Sbjct: 1 MATRFRQTRRRRGHVSMGYGRIGKHRKQRGGRGNAGGQHHRKTWFTTFHPDYFGK 55 Score = 77.8 bits (190), Expect(2) = 6e-33 Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 4/72 (5%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAG----GDKAPVVDVSQFGYFKVL 265 GK GMR FH +N++Y P++NV+ LWS+V D A+ G++ PV+D + GYFKVL Sbjct: 54 GKHGMRVFHLKANKYYCPSINVDSLWSLVGKDIQAQYKNAKVGEEVPVIDCVKHGYFKVL 113 Query: 264 GKGMLPEKPIVV 229 GKG LP++P++V Sbjct: 114 GKGFLPKQPVIV 125
>R27A3_ENTHI (Q9BI14) 60S ribosomal protein L27a-3| Length = 149 Score = 82.8 bits (203), Expect(2) = 1e-32 Identities = 33/55 (60%), Positives = 42/55 (76%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M TR ++ R++RGHVS G+GR+GKHRK GGRGNAGG HH + F +HP YFG+ Sbjct: 1 MATRFRQTRRRRGHVSMGYGRIGKHRKQRGGRGNAGGQHHRKTWFTTFHPDYFGK 55 Score = 76.6 bits (187), Expect(2) = 1e-32 Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAE----AGGDKAPVVDVSQFGYFKVL 265 GK GMR FH +N++Y P++NV+ LWS+V D + G++ PV+D + GYFKVL Sbjct: 54 GKHGMRVFHLKANKYYCPSINVDSLWSLVGKDVQEQYKNAKTGEEVPVIDCVKHGYFKVL 113 Query: 264 GKGMLPEKPIVV 229 GKG LP++P++V Sbjct: 114 GKGFLPKQPVIV 125
>RL27A_TRYBB (O15883) 60S ribosomal protein L27a (L29)| Length = 145 Score = 92.4 bits (228), Expect(2) = 1e-28 Identities = 40/55 (72%), Positives = 43/55 (78%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M TR KK R +RG G+GRVGKHRKHP GRGNAGG HHHRI F KYHPGYFG+ Sbjct: 1 MPTRFKKTRHQRGSTFCGYGRVGKHRKHPSGRGNAGGEHHHRINFRKYHPGYFGK 55 Score = 53.5 bits (127), Expect(2) = 1e-28 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEA-GGDKAPVVDVSQFGYFKVLGKG 256 GK GM ++HK N + PT+N++ L ++ D+A +A G+ PV+D+ GY K+LG G Sbjct: 54 GKCGMNHYHKKKNTTWKPTINLDNLTKLMAKDEAMKAKKGEVLPVIDLLANGYSKLLGNG 113 Query: 255 MLPEKPIV 232 L IV Sbjct: 114 HLQAPCIV 121
>RL27A_ENCCU (O62581) 60S ribosomal protein L27a| Length = 147 Score = 80.1 bits (196), Expect(2) = 3e-26 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 MT R+KK RK RGHVS G+GRVGKHRKH GGRG AGG H + F ++HP Y G+ Sbjct: 1 MTDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGK 55 Score = 58.2 bits (139), Expect(2) = 3e-26 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAE--AGGDKAPVVDVSQFGYFKVLGK 259 GK GMR +H+ N Y ++ RLW M+P ++ + +K PV+DV +FGY V+G Sbjct: 54 GKRGMRVYHRKENSDYARPISSARLWGMIPKEQRYDFLDNPEKVPVIDVREFGYHVVVGG 113 Query: 258 GMLPEKPIVV 229 + E+PIVV Sbjct: 114 KLSLERPIVV 123
>RL27A_PIG (Q29333) 60S ribosomal protein L27a (Fragment)| Length = 53 Score = 101 bits (251), Expect = 2e-21 Identities = 43/52 (82%), Positives = 46/52 (88%) Frame = -2 Query: 586 TRLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFG 431 +RL+ RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI FDKYH GYFG Sbjct: 2 SRLRXTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHXGYFG 53
>RL15_METMP (Q6LXD1) 50S ribosomal protein L15P| Length = 143 Score = 50.4 bits (119), Expect(2) = 3e-08 Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRK--HPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M + KK KKRG + G+G KHR H GGRGNAG H + K++P YFG+ Sbjct: 1 MIRKSKKITKKRGSRTCGYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPDYFGK 57 Score = 26.9 bits (58), Expect(2) = 3e-08 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -3 Query: 378 TVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIV 232 T+N+ L + K A + VV+ ++ G+ KVLGKG + +V Sbjct: 72 TINIGELEEYILKYKDAFQVEEGKVVVNATEIGFEKVLGKGRISTAMVV 120
>RL15_METVA (P14032) 50S ribosomal protein L15P| Length = 143 Score = 48.5 bits (114), Expect(2) = 4e-08 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRK--HPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M + KK K+RG + G+G KHR H GGRGNAG H + K++P YFG+ Sbjct: 1 MIRKSKKITKQRGSRTCGYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPEYFGK 57 Score = 28.5 bits (62), Expect(2) = 4e-08 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = -3 Query: 378 TVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIV 232 T+NV L V K A D VV+ ++ G+ K+LGKG + +V Sbjct: 72 TINVGELEEYVLKYKDAFKLKDGKVVVNATEIGFEKILGKGRISTAMVV 120
>RL15_METTH (O26133) 50S ribosomal protein L15P| Length = 146 Score = 40.4 bits (93), Expect(2) = 6e-07 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRK--HPGGRGNAGGMHHHRILFDKYHPGYFGQ 428 M + +K + RG + G G K R H GGRG AGG HH KY P +FG+ Sbjct: 1 MIRKRRKITRMRGSRTVGGGCSKKRRGAGHRGGRGQAGGHKHHWTWIVKYDPKHFGK 57 Score = 32.3 bits (72), Expect(2) = 6e-07 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPS--DKAAEAGGDKAPVVDVSQFGYFKVLGK 259 GK G + KL R TVN+ L M+P ++ + D V+DV G+ KVLG Sbjct: 56 GKYGFKRPQKLIKRL--ETVNLAYLDEMIPELLERGVASEEDGMVVLDVRDLGFEKVLGS 113 Query: 258 GML 250 G + Sbjct: 114 GRI 116
>RL15_METJA (P54047) 50S ribosomal protein L15P| Length = 143 Score = 38.9 bits (89), Expect(2) = 1e-06 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = -2 Query: 592 MTTRLKKNRKKRGHVSAGHGRVGKHRK--HPGGRGNAGGMHHHRILFDKYHPGYFGQSRY 419 M + KK +K RG + G G K R + GGRG AGG H KY P YFG+ + Sbjct: 1 MIRKKKKVKKIRGSRTCGGGSHKKRRGAGNKGGRGMAGGHKHKWTWIIKYCPDYFGKYGF 60 Query: 418 EVLP 407 + P Sbjct: 61 KRHP 64 Score = 32.7 bits (73), Expect(2) = 1e-06 Identities = 25/67 (37%), Positives = 31/67 (46%) Frame = -3 Query: 432 GKVGMRYFHKLSNRFYTPTVNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGM 253 GK G + L R T+NV L +V + D VVDV + GY KVLGKG Sbjct: 56 GKYGFKRHPSLVKRL--ETINVGELEEIVLKNPDKFEKEDDKFVVDVIELGYEKVLGKGK 113 Query: 252 LPEKPIV 232 + IV Sbjct: 114 VTIPMIV 120
>RL15_SULAC (O05643) 50S ribosomal protein L15P| Length = 144 Score = 33.5 bits (75), Expect(2) = 8e-04 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = -2 Query: 577 KKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFD-KYHPGYFGQ 428 KK+RK RG+ + G G G+HR G GMH + + K+ G++G+ Sbjct: 7 KKSRKYRGYRTHGWGTKGQHRDRGAQGGRQIGMHKEKWSWTVKFGEGWYGK 57 Score = 28.5 bits (62), Expect(2) = 8e-04 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = -3 Query: 375 VNVERLWSMVPSDKAAEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIVV 229 + + +L + +DK + VVD++++GY K+LG G L P+V+ Sbjct: 71 IGLRKLQEYIDNDKIKIEEENGKKVVDLAKYGYDKLLGGGNL-RLPLVI 118
>RL28_CANAL (P47831) 60S ribosomal protein L28 (L27A) (L29) (Fragment)| Length = 62 Score = 40.0 bits (92), Expect = 0.005 Identities = 17/34 (50%), Positives = 23/34 (67%) Frame = -3 Query: 330 AEAGGDKAPVVDVSQFGYFKVLGKGMLPEKPIVV 229 +++ APV+D GY KVLGKG LPE P++V Sbjct: 8 SKSSASAAPVIDTLAHGYGKVLGKGRLPEVPVIV 41
>RL15_SULSO (Q9UX85) 50S ribosomal protein L15P| Length = 144 Score = 33.5 bits (75), Expect(2) = 0.007 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -2 Query: 583 RLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHR-ILFDKYHPGYFGQ 428 R KK+RK RG + G G G+HR G GMH + KY G++G+ Sbjct: 5 REKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGKGWYGK 57 Score = 25.4 bits (54), Expect(2) = 0.007 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = -3 Query: 384 TPTVNVERLWSMVPSD--KAAEAGGDKAPVVDVSQFGYFKVLGKGML 250 T +++ +L ++ S K E G K +VD+++ GY K+LG G + Sbjct: 68 TSAISLRKLNELLESGYIKIKEMDGKK--IVDLNELGYNKLLGGGSI 112
>RL15_PYRAE (Q8ZT50) 50S ribosomal protein L15P| Length = 156 Score = 35.0 bits (79), Expect = 0.17 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Frame = -2 Query: 592 MTTRLKKNRK-KRGHVSAGHGRVGKHRKHPGGRGNAG--GMHHHR 467 M R K+ K +RG + G GRVG+HRK GG G G G H H+ Sbjct: 1 MVRRFKRGTKYRRGSRTHGWGRVGQHRK-SGGSGGKGMVGFHKHK 44
>RL15_THEVO (Q97BV4) 50S ribosomal protein L15P| Length = 145 Score = 33.9 bits (76), Expect = 0.37 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = -2 Query: 583 RLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFG 431 R + + + GH G + G+ + GGRGNAG H I KY P +FG Sbjct: 3 RERTKKLRGGHYGRGM-KAGRGKGKKGGRGNAGMGKHKWIWMVKYDPLHFG 52
>RL15_THEAC (Q9HIS9) 50S ribosomal protein L15P| Length = 144 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = -2 Query: 583 RLKKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFG 431 R + + + GH G + G+ + GG GNAG H I KY P +FG Sbjct: 3 RERTKKLRGGHYGRGF-KAGRGKGKKGGSGNAGMGKHKWIWMVKYDPLHFG 52
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = -2 Query: 559 RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQSRYE 416 RGH GHG G HR H GG + G M + + H G RYE Sbjct: 881 RGHDGPGHGG-GGHRGHDGGHSHGGDMSNRPVC---RHFMMKGNCRYE 924
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = -2 Query: 559 RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQSRYE 416 RGH GHG G HR H GG + G M + + H G RYE Sbjct: 881 RGHDGPGHGG-GGHRGHDGGHSHGGDMSNRPVC---RHFMMKGNCRYE 924
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = -2 Query: 559 RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQSRYE 416 RGH GHG G HR H GG + G M + + H G RYE Sbjct: 881 RGHDGPGHGG-GGHRGHDGGHSHGGDMSNRPVC---RHFMMKGNCRYE 924
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 30.4 bits (67), Expect = 4.1 Identities = 19/48 (39%), Positives = 21/48 (43%) Frame = -2 Query: 559 RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQSRYE 416 RGH GHG G HR H GG + G M + H G RYE Sbjct: 866 RGHDGPGHGG-GGHRGHDGGHNHGGDMSKRPVC---RHFMMKGNCRYE 909
>AXN1_HUMAN (O15169) Axin-1 (Axis inhibition protein 1) (hAxin)| Length = 862 Score = 30.4 bits (67), Expect = 4.1 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -2 Query: 556 GHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYH 446 G ++GHG KH G + +A G+HHHR + H Sbjct: 507 GGAASGHG---KHVPKSGAKLDAAGLHHHRHVHHHVH 540
>DBP9_NEUCR (Q7S6F3) ATP-dependent RNA helicase dbp-9 (EC 3.6.1.-)| Length = 676 Score = 30.0 bits (66), Expect = 5.3 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -2 Query: 577 KKNRKKRGHVSAGHGRVGKHRKHPGGRGN 491 KK R K+G G G GK++K PGGR N Sbjct: 640 KKTRGKKG-AKGGKGGHGKYKKGPGGRKN 667
>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 888 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = -2 Query: 559 RGHVSAGHGRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQSRYEV 413 R H G HR H G GN GG HR H G G ++V Sbjct: 766 RSHDGPGGNMGSGHRSHDGPGGNMGGSGGHRSHEGPGHGGPHGHRPHDV 814
>AXN1_BRARE (P57094) Axin-1 (Axis inhibition protein 1)| Length = 835 Score = 30.0 bits (66), Expect = 5.3 Identities = 14/51 (27%), Positives = 25/51 (49%) Frame = -2 Query: 535 GRVGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGQSRYEVLPQAQQQVLH 383 G GKH+ G +G A +HHH+ + +H Y + + +A+ +H Sbjct: 521 GGQGKHQARQGPKGEAAHLHHHKHI---HHTHYAAAGKPKEQAEAEAARMH 568 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,681,214 Number of Sequences: 219361 Number of extensions: 873959 Number of successful extensions: 2945 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 2711 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2913 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)