ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags20p20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104584.1| Zea mays PCO129366 mRNA sequence Length = 1360 Score = 137 bits (69), Expect = 5e-29 Identities = 139/161 (86%), Gaps = 1/161 (0%) Strand = Plus / Minus Query: 491 cctcctctttcctcttgcgggcccacttcgggctgacctcgatgagcctgtgaggcatga 550 ||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||| | Sbjct: 904 cctccgctttcctcttgcgaatccacctcgggctaacctcgatgagcctgtgaggcataa 845 Query: 551 gctgcttctccttccgggtgagcttctttgtagttcatgactctgagtttcgcaatcttg 610 |||||| |||||||| ||| |||||| |||||||| | || |||||||| || ||||| Sbjct: 844 gctgctgctccttcctggtcagcttc-ttgtagttgctcaccctgagtttggcgatcttt 786 Query: 611 gcttcctcctcggctgtggcttctctgaccaccactgtcag 651 || |||||||| ||||| |||||||| |||||||||||||| Sbjct: 785 gcctcctcctcagctgtagcttctctaaccaccactgtcag 745
>ref|NM_192797.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 858 Score = 105 bits (53), Expect = 2e-19 Identities = 135/161 (83%), Gaps = 1/161 (0%) Strand = Plus / Minus Query: 491 cctcctctttcctcttgcgggcccacttcgggctgacctcgatgagcctgtgaggcatga 550 ||||||||||||||||||| |||||| ||||||| |||||||| || | ||| ||||| | Sbjct: 811 cctcctctttcctcttgcgagcccacctcgggctaacctcgataagacggtgcggcatta 752 Query: 551 gctgcttctccttccgggtgagcttctttgtagttcatgactctgagtttcgcaatcttg 610 ||||||||||||| | ||| |||||| || ||||| |||||||||||||||| ||||| Sbjct: 751 gctgcttctcctttctggtcagcttc-ttatagttgctgactctgagtttcgcgatcttt 693 Query: 611 gcttcctcctcggctgtggcttctctgaccaccactgtcag 651 || || ||||| || || || |||| ||||| |||||||| Sbjct: 692 gcctcttcctcagcggtagcctctcgaaccactactgtcag 652
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 105 bits (53), Expect = 2e-19 Identities = 135/161 (83%), Gaps = 1/161 (0%) Strand = Plus / Minus Query: 491 cctcctctttcctcttgcgggcccacttcgggctgacctcgatgagcctgtgaggcatga 550 ||||||||||||||||||| |||||| ||||||| |||||||| || | ||| ||||| | Sbjct: 24479520 cctcctctttcctcttgcgagcccacctcgggctaacctcgataagacggtgcggcatta 24479461 Query: 551 gctgcttctccttccgggtgagcttctttgtagttcatgactctgagtttcgcaatcttg 610 ||||||||||||| | ||| |||||| || ||||| |||||||||||||||| ||||| Sbjct: 24479460 gctgcttctcctttctggtcagcttc-ttatagttgctgactctgagtttcgcgatcttt 24479402 Query: 611 gcttcctcctcggctgtggcttctctgaccaccactgtcag 651 || || ||||| || || || |||| ||||| |||||||| Sbjct: 24479401 gcctcttcctcagcggtagcctctcgaaccactactgtcag 24479361
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 105 bits (53), Expect = 2e-19 Identities = 135/161 (83%), Gaps = 1/161 (0%) Strand = Plus / Minus Query: 491 cctcctctttcctcttgcgggcccacttcgggctgacctcgatgagcctgtgaggcatga 550 ||||||||||||||||||| |||||| ||||||| |||||||| || | ||| ||||| | Sbjct: 59904 cctcctctttcctcttgcgagcccacctcgggctaacctcgataagacggtgcggcatta 59845 Query: 551 gctgcttctccttccgggtgagcttctttgtagttcatgactctgagtttcgcaatcttg 610 ||||||||||||| | ||| |||||| || ||||| |||||||||||||||| ||||| Sbjct: 59844 gctgcttctcctttctggtcagcttc-ttatagttgctgactctgagtttcgcgatcttt 59786 Query: 611 gcttcctcctcggctgtggcttctctgaccaccactgtcag 651 || || ||||| || || || |||| ||||| |||||||| Sbjct: 59785 gcctcttcctcagcggtagcctctcgaaccactactgtcag 59745
>dbj|AK073157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012O14, full insert sequence Length = 1196 Score = 105 bits (53), Expect = 2e-19 Identities = 135/161 (83%), Gaps = 1/161 (0%) Strand = Plus / Minus Query: 491 cctcctctttcctcttgcgggcccacttcgggctgacctcgatgagcctgtgaggcatga 550 ||||||||||||||||||| |||||| ||||||| |||||||| || | ||| ||||| | Sbjct: 944 cctcctctttcctcttgcgagcccacctcgggctaacctcgataagacggtgcggcatta 885 Query: 551 gctgcttctccttccgggtgagcttctttgtagttcatgactctgagtttcgcaatcttg 610 ||||||||||||| | ||| |||||| || ||||| |||||||||||||||| ||||| Sbjct: 884 gctgcttctcctttctggtcagcttc-ttatagttgctgactctgagtttcgcgatcttt 826 Query: 611 gcttcctcctcggctgtggcttctctgaccaccactgtcag 651 || || ||||| || || || |||| ||||| |||||||| Sbjct: 825 gcctcttcctcagcggtagcctctcgaaccactactgtcag 785
>gb|AY616034.1| Xenopus laevis myosin 10 mRNA, complete cds Length = 7764 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 487 tcctcctcctctttcctcttgcg 509 ||||||||||||||||||||||| Sbjct: 2871 tcctcctcctctttcctcttgcg 2849
>gb|AC166056.2| Mus musculus BAC clone RP23-462A15 from chromosome 13, complete sequence Length = 198814 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 195108 cctcctcctcctctttcctctt 195129
>gb|AC120841.7| Mus musculus chromosome 8, clone RP24-553L18, complete sequence Length = 143963 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 65797 cctcctcctcctctttcctctt 65818
>gb|AC121097.6| Mus musculus chromosome 13, clone RP24-449F13, complete sequence Length = 217251 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 8349 cctcctcctcctctttcctctt 8370
>gb|AC125096.3| Mus musculus BAC clone RP24-181K19 from chromosome 18, complete sequence Length = 154941 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 82353 cctcctcctcctctttcctctt 82332
>gb|AC117226.3| Mus musculus BAC clone RP23-377C22 from 13, complete sequence Length = 169858 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 60206 cctcctcctcctctttcctctt 60227
>gb|AC073182.4| Homo sapiens BAC clone CTD-2012B24 from 7, complete sequence Length = 122912 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 609 cctcctcctcctctttcctctt 630 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 845 cctcctcctcctctttcctc 864 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 829 cctcctcctcctctttcctc 848 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 813 cctcctcctcctctttcctc 832 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 797 cctcctcctcctctttcctc 816 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 781 cctcctcctcctctttcctc 800 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 733 cctcctcctcctctttcctc 752 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 679 cctcctcctcctctttcctc 698 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 663 cctcctcctcctctttcctc 682 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 647 cctcctcctcctctttcctc 666
>gb|AC092108.4| Homo sapiens BAC clone RP11-1263I10 from 7, complete sequence Length = 26349 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 24958 cctcctcctcctctttcctctt 24979 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 25226 cctcctcctcctctttcctc 25245 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 25210 cctcctcctcctctttcctc 25229 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 25194 cctcctcctcctctttcctc 25213 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 25178 cctcctcctcctctttcctc 25197 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 25162 cctcctcctcctctttcctc 25181 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 25146 cctcctcctcctctttcctc 25165 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 25082 cctcctcctcctctttcctc 25101 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 25028 cctcctcctcctctttcctc 25047 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 25012 cctcctcctcctctttcctc 25031 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 24996 cctcctcctcctctttcctc 25015
>gb|AC108508.2| Genomic sequence for Mus musculus, clone RP23-437O14, complete sequence Length = 196162 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 128690 cctcctcctcctctttcctctt 128711
>emb|AL604027.9| Mouse DNA sequence from clone RP23-155G20 on chromosome 11, complete sequence Length = 196398 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 193254 cctcctcctcctctttcctctt 193233
>gb|AC080013.17| Homo sapiens 3 BAC RP11-379F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163074 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 86826 cctcctcctcctctttcctctt 86847
>gb|AC159097.5| Mus musculus chromosome 8, clone RP24-310O9, complete sequence Length = 179528 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 155374 cctcctcctcctctttcctctt 155395
>dbj|AK044584.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930025A13 product:unclassifiable, full insert sequence Length = 2348 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 971 cctcctcctcctctttcctctt 992
>gb|AC154764.2| Mus musculus BAC clone RP24-423N7 from chromosome 16, complete sequence Length = 159556 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 95358 cctcctcctcctctttcctctt 95379
>gb|AC009434.19| Homo sapiens chromosome 15, clone RP11-96C21, complete sequence Length = 177207 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 139259 cctcctcctcctctttcctctt 139238
>emb|AL844580.13| Mouse DNA sequence from clone RP23-367K9 on chromosome 2, complete sequence Length = 222380 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 22183 cctcctcctcctctttcctctt 22162
>emb|CT009564.11| Mouse DNA sequence from clone RP23-16F13 on chromosome 17, complete sequence Length = 157729 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 22106 cctcctcctcctctttcctctt 22085
>emb|AL773595.10| Mouse DNA sequence from clone RP23-297I16 on chromosome 2, complete sequence Length = 173925 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 12414 cctcctcctcctctttcctctt 12393
>emb|AL731654.7| Mouse DNA sequence from clone RP23-376I2 on chromosome 4, complete sequence Length = 49798 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctctt 506 |||||||||||||||||||||| Sbjct: 9923 cctcctcctcctctttcctctt 9944
>gb|AC154842.2| Mus musculus BAC clone RP23-55C11 from chromosome 17, complete sequence Length = 252431 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 106580 cctcctcctcctctttcctct 106560
>ref|XM_479797.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2387 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 85 cctcctcctcctctttcctct 105
>ref|NM_001031477.1| Gallus gallus scavenger receptor cysteine rich domain containing, group B (4 domains) (SRCRB4D), mRNA Length = 3348 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gcctcctcctcctctttcctc 504 ||||||||||||||||||||| Sbjct: 49 gcctcctcctcctctttcctc 69
>gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, complete sequence Length = 213387 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 175752 cctcctcctcctctttcctct 175732
>gb|AC148759.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0030K09, complete sequence Length = 143355 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gcctcctcctcctctttcctc 504 ||||||||||||||||||||| Sbjct: 32878 gcctcctcctcctctttcctc 32898
>gb|AC137745.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0041J18, complete sequence Length = 129523 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gcctcctcctcctctttcctc 504 ||||||||||||||||||||| Sbjct: 99739 gcctcctcctcctctttcctc 99759
>gb|AC135428.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0628H02, complete sequence Length = 65115 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 cagcctcctcctcctctttcc 502 ||||||||||||||||||||| Sbjct: 41003 cagcctcctcctcctctttcc 40983
>gb|AC137746.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0030J05, complete sequence Length = 147352 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 cagcctcctcctcctctttcc 502 ||||||||||||||||||||| Sbjct: 6313 cagcctcctcctcctctttcc 6293
>gb|AC127342.3| Mus musculus BAC clone RP23-191B18 from chromosome 18, complete sequence Length = 185210 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 ccagcctcctcctcctctttc 501 ||||||||||||||||||||| Sbjct: 60457 ccagcctcctcctcctctttc 60477
>emb|CR407547.14| Zebrafish DNA sequence from clone DKEY-62A12 in linkage group 9, complete sequence Length = 204067 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 ctcctcctcctctttcctctt 506 ||||||||||||||||||||| Sbjct: 179236 ctcctcctcctctttcctctt 179256
>gb|AC110554.10| Mus musculus chromosome 8, clone RP23-249H16, complete sequence Length = 170361 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 99453 cctcctcctcctctttcctct 99473
>gb|AC124914.3| Homo sapiens chromosome 3 clone RP11-146K16, complete sequence Length = 187803 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 90210 cctcctcctcctctttcctct 90190
>emb|AJ851534.1| Gallus gallus mRNA for hypothetical protein, clone 5e12 Length = 3348 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gcctcctcctcctctttcctc 504 ||||||||||||||||||||| Sbjct: 49 gcctcctcctcctctttcctc 69
>emb|AL662882.13| Mouse DNA sequence from clone RP23-187N13 on chromosome 11, complete sequence Length = 222359 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 taaaaagtaacacacccagaa 26 ||||||||||||||||||||| Sbjct: 126654 taaaaagtaacacacccagaa 126634
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gcctcctcctcctctttcctc 504 ||||||||||||||||||||| Sbjct: 16572441 gcctcctcctcctctttcctc 16572461
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gcctcctcctcctctttcctc 504 ||||||||||||||||||||| Sbjct: 270100 gcctcctcctcctctttcctc 270120
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 968027 cctcctcctcctctttcctct 968047
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 cagcctcctcctcctctttcc 502 ||||||||||||||||||||| Sbjct: 12507465 cagcctcctcctcctctttcc 12507445
>gb|AC155328.5| Mus musculus 6 BAC RP24-75K10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 216930 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 44098 cctcctcctcctctttcctct 44118
>gb|AC154721.3| Mus musculus BAC clone RP24-371H8 from chromosome 17, complete sequence Length = 128301 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 50581 cctcctcctcctctttcctct 50601
>gb|AC069148.6| Homo sapiens BAC clone RP11-107N15 from 2, complete sequence Length = 71173 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 984 cctcctcctcctctttcctct 964
>gb|AC007358.2| Homo sapiens BAC clone RP11-53H10 from 2, complete sequence Length = 155611 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 1017 cctcctcctcctctttcctct 1037
>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0414D03 Length = 169823 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gcctcctcctcctctttcctc 504 ||||||||||||||||||||| Sbjct: 18699 gcctcctcctcctctttcctc 18719
>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0066B16 Length = 190143 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gcctcctcctcctctttcctc 504 ||||||||||||||||||||| Sbjct: 165598 gcctcctcctcctctttcctc 165618
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 130765 cctcctcctcctctttcctct 130785
>dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104G24, full insert sequence Length = 2387 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 85 cctcctcctcctctttcctct 105
>emb|CR385027.12| Zebrafish DNA sequence from clone DKEY-13A17 in linkage group 9, complete sequence Length = 228454 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 ctcctcctcctctttcctctt 506 ||||||||||||||||||||| Sbjct: 158867 ctcctcctcctctttcctctt 158847
>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence Length = 162405 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 128268 cctcctcctcctctttcctct 128288
>emb|AJ509725.1|AME509725 Apis mellifera microsatellite marker Am0494=AG005g Length = 509 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctct 505 ||||||||||||||||||||| Sbjct: 381 cctcctcctcctctttcctct 401
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gcctcctcctcctctttcctc 504 ||||||||||||||||||||| Sbjct: 16662974 gcctcctcctcctctttcctc 16662994
>emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-991C1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 177792 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 aagcaccagcctcctcctcct 496 ||||||||||||||||||||| Sbjct: 64319 aagcaccagcctcctcctcct 64339
>gb|AC153729.1| Mus musculus BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250801 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 31319 cctcctcctcctctttcctc 31300
>gb|AC107838.16| Mus musculus chromosome 1, clone RP23-274N9, complete sequence Length = 160232 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 tcctcctcctctttcctctt 506 |||||||||||||||||||| Sbjct: 56318 tcctcctcctctttcctctt 56337
>gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, complete sequence Length = 238980 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 123591 cctcctcctcctctttcctc 123572
>gb|AC005364.1| Homo sapiens chromosome 16, cosmid clone 53H2 (LANL), complete sequence Length = 36342 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 1294 cctcctcctcctctttcctc 1313
>gb|AC005347.1| Homo sapiens chromosome 16, cosmid clone 308C6 (LANL), complete sequence Length = 35828 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 22082 cctcctcctcctctttcctc 22101
>gb|AC115937.14| Mus musculus chromosome 5, clone RP24-547J21, complete sequence Length = 215400 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 198586 cctcctcctcctctttcctc 198605
>gb|AC161276.2| Pan troglodytes BAC clone CH251-520C21 from chromosome 7, complete sequence Length = 210088 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 tcctcctcctctttcctctt 506 |||||||||||||||||||| Sbjct: 93767 tcctcctcctctttcctctt 93748
>gb|AC127417.3| Mus musculus BAC clone RP23-459M2 from chromosome 10, complete sequence Length = 192814 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 142264 cctcctcctcctctttcctc 142245 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 32571 cctcctcctcctctttcctc 32552
>gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, complete sequence Length = 170056 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctcttgc 508 ||||||||||||||| |||||||| Sbjct: 40129 cctcctcctcctcttccctcttgc 40106
>gb|AC163025.3| Mus musculus chromosome 1, clone RP23-80N7, complete sequence Length = 174774 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctcttgc 508 ||||||||||||||| |||||||| Sbjct: 36014 cctcctcctcctcttccctcttgc 36037
>gb|AC110235.13| Mus musculus chromosome 9, clone RP23-100M12, complete sequence Length = 220755 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 481 ccagcctcctcctcctctttcctc 504 |||| ||||||||||||||||||| Sbjct: 5429 ccagtctcctcctcctctttcctc 5406
>gb|AC132110.2| Mus musculus BAC clone RP24-188M9 from chromosome 18, complete sequence Length = 189130 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ctcctcctcctctttcctct 505 |||||||||||||||||||| Sbjct: 96819 ctcctcctcctctttcctct 96800
>gb|AC055873.8| Homo sapiens chromosome 15, clone RP11-339F1, complete sequence Length = 194765 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 103260 cctcctcctcctctttcctc 103241
>gb|AC116690.15| Mus musculus chromosome 8, clone RP24-279I6, complete sequence Length = 171583 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 tcctcctcctctttcctctt 506 |||||||||||||||||||| Sbjct: 158455 tcctcctcctctttcctctt 158436
>gb|AC122514.4| Mus musculus BAC clone RP24-455L10 from chromosome 8, complete sequence Length = 171839 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 tcctcctcctctttcctctt 506 |||||||||||||||||||| Sbjct: 64399 tcctcctcctctttcctctt 64418
>gb|AC131234.3| Homo sapiens 12 BAC RP11-308F13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 16903 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 agcaccagcctcctcctcct 496 |||||||||||||||||||| Sbjct: 9466 agcaccagcctcctcctcct 9485
>gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosome 3, complete sequence Length = 190309 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctcttgc 508 ||||||||||||| |||||||||| Sbjct: 156352 cctcctcctcctccttcctcttgc 156329
>gb|AC010268.10| Homo sapiens clone CTC-484E17, complete sequence Length = 165776 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 163579 cctcctcctcctctttcctc 163598
>gb|AC002127.1| Homo sapiens BAC clone CTA-305H12 from 7, complete sequence Length = 144165 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 tcctcctcctctttcctctt 506 |||||||||||||||||||| Sbjct: 5124 tcctcctcctctttcctctt 5143
>emb|CR653221.2|CNS0F2ZV Tetraodon nigroviridis full-length cDNA Length = 1060 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 133 cctcctcctcctctttcctc 152
>emb|CR640419.2|CNS0ET49 Tetraodon nigroviridis full-length cDNA Length = 1052 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 126 cctcctcctcctctttcctc 145
>gb|AC158144.13| Mus musculus chromosome 7, clone RP23-82N3, complete sequence Length = 213341 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gtaccaaaaatacataatgt 109 |||||||||||||||||||| Sbjct: 105164 gtaccaaaaatacataatgt 105183
>emb|CR634596.2|CNS0EOMI Tetraodon nigroviridis full-length cDNA Length = 1041 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 128 cctcctcctcctctttcctc 147
>gb|AC161366.6| Mus musculus BAC clone RP24-230D17 from chromosome 9, complete sequence Length = 155733 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 ccagcctcctcctcctctttcctc 504 |||| ||||||||||||||||||| Sbjct: 38538 ccagtctcctcctcctctttcctc 38561
>gb|AC158512.2| Mus musculus BAC clone RP24-319O6 from chromosome 9, complete sequence Length = 171723 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 104530 cctcctcctcctctttcctc 104549
>emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on chromosome 6 Contains a CpG island, complete sequence Length = 170970 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctcttgc 508 ||||||||||||| |||||||||| Sbjct: 60613 cctcctcctcctccttcctcttgc 60590
>emb|AL451146.7| Human DNA sequence from clone RP11-510K18 on chromosome 10 Contains a serine/threonine protein kinase pseudogene, complete sequence Length = 200891 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 ttctctgaccaccactgtca 650 |||||||||||||||||||| Sbjct: 192157 ttctctgaccaccactgtca 192176
>emb|AL449083.23| Human DNA sequence from clone RP11-434N3 on chromosome 9, complete sequence Length = 128945 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 tcctcctcctctttcctctt 506 |||||||||||||||||||| Sbjct: 28822 tcctcctcctctttcctctt 28803 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 tcctcctcctctttcctctt 506 |||||||||||||||||||| Sbjct: 28760 tcctcctcctctttcctctt 28741
>emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on chromosome 1 Contains the 3' UTR of a novel gene (DKFZp761P211), the ITPKB gene for inositol 1,4,5-trisphosphate 3-kinase B, two novel genes, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene and a CpG island, complete sequence Length = 181144 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 tcctcctcctctttcctctt 506 |||||||||||||||||||| Sbjct: 132452 tcctcctcctctttcctctt 132471
>emb|AL356433.19| Human DNA sequence from clone RP11-453F1 on chromosome 10 Contains three CpG islands, complete sequence Length = 159810 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 104500 cctcctcctcctctttcctc 104481
>emb|AL356312.12| Human DNA sequence from clone RP11-172A19 on chromosome 13, complete sequence Length = 60683 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 624 ctgtggcttctctgaccaccactgtcag 651 ||||| || ||||||||||||||||||| Sbjct: 49379 ctgtgcctcctctgaccaccactgtcag 49352
>emb|AL138781.13| Human DNA sequence from clone RP11-83N9 on chromosome 9p34.1-35.1 Contains a novel gene (LOC90120), the LHX3 gene for LIM homeobox protein 3, the gene for a novel protein (DKFZp762A2013) similar to quiescin proteins and seven CpG islands, complete sequence Length = 154918 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 gcaccagcctcctcctcctc 497 |||||||||||||||||||| Sbjct: 37773 gcaccagcctcctcctcctc 37754
>gb|AC158218.4| Mus musculus chromosome 8, clone RP23-196J23, complete sequence Length = 239980 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 tcctcctcctctttcctctt 506 |||||||||||||||||||| Sbjct: 111573 tcctcctcctctttcctctt 111554
>emb|AL109927.61|HSDJ547C9 Human DNA sequence from clone RP4-547C9 on chromosome 1p34.3-36.12 Contains the 3' end of the PPP1R8 protein phosphatase 1, regulatory (inhibitor) subunit 8, the C1orf38 gene for chromosome 1 open reading frame 38, the RPA2 gene for replication protein A2, 32kDa and a CpG island, complete sequence Length = 79438 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 73829 cctcctcctcctctttcctc 73848
>ref|XM_963546.1| PREDICTED: Tribolium castaneum similar to CG9388-PA (LOC657059), mRNA Length = 1448 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 tgcgggcccacttcgggctg 525 |||||||||||||||||||| Sbjct: 1189 tgcgggcccacttcgggctg 1208
>gb|AC112162.8| Mus Musculus chromosome 9 BAC clone MGS1-296M6 ES cell line, complete sequence Length = 116580 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 ccagcctcctcctcctctttcctc 504 |||| ||||||||||||||||||| Sbjct: 12312 ccagtctcctcctcctctttcctc 12335
>emb|AL603924.18| Mouse DNA sequence from clone RP23-188C13 on chromosome 11 Contains the 3' end of a novel gene, a pygopus 2 (Pygo2) pseudogene, the Sec61g gene for SEC61, gamma subunit (S. cerevisiae), a thymoma viral proto-oncogene 2 (Akt2) pseudogene and a CpG island, complete sequence Length = 219989 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 agtaaatctcaacagatgga 384 |||||||||||||||||||| Sbjct: 75213 agtaaatctcaacagatgga 75232
>emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chromosome 11 Contains a ribosomal protein S2 (Rps2) pseudogene, a novel gene, an apurinic/apyrimidinic endonuclease 2 (Apex2) pseudogene, the Rtn4 gene for reticulon 4, the 3' end of the gene for a novel protein (C230094A16Rik) (MGC38936) and a CpG island, complete sequence Length = 212042 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 11858 cctcctcctcctctttcctc 11877
>emb|AL589699.4| Mouse DNA sequence from clone RP23-92G13 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to KIAA0386, five novel genes, the Gmnn gene for geminin, gene PNAS-27, the Ttrap gene for Traf and Tnf receptor associated protein, the gene for a novel protein similar to KIAA0319, the gene for the ortholog of human and rat aldehyde dehydrogenase 5A1 (succinate-semialdehyde dehydrogenase) (ALDH5A1) (SSADH), the 5' end of the Gpld1 gene for glycosylphosphatidylinositol specific phospholipase D1 and four CpG islands, complete sequence Length = 256608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 accagcctcctcctcctctt 499 |||||||||||||||||||| Sbjct: 43267 accagcctcctcctcctctt 43248
>gb|AC104989.11| Homo sapiens chromosome 8, clone RP11-769N21, complete sequence Length = 181644 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ctcctcctcctctttcctct 505 |||||||||||||||||||| Sbjct: 160032 ctcctcctcctctttcctct 160013
>gb|AC162943.2| Mus musculus BAC clone RP23-76K9 from chromosome 16, complete sequence Length = 184984 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 142572 cctcctcctcctctttcctc 142591
>gb|AC129312.6| Mus musculus BAC clone RP24-405K6 from chromosome 1, complete sequence Length = 197135 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 38793 cctcctcctcctctttcctc 38812
>gb|AC009717.15| Homo sapiens chromosome 18, clone RP11-534N16, complete sequence Length = 184717 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 155293 cctcctcctcctctttcctc 155312
>dbj|AK123741.1| Homo sapiens cDNA FLJ41747 fis, clone HSYRA2006873 Length = 2169 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ggaccctgctgcaaacggga 460 |||||||||||||||||||| Sbjct: 1609 ggaccctgctgcaaacggga 1628
>gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209599 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 109003 cctcctcctcctctttcctc 109022
>emb|AL606905.8| Mouse DNA sequence from clone RP23-394K13 on chromosome 2, complete sequence Length = 59640 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 18233 cctcctcctcctctttcctc 18214
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 cagcctcctcctcctctttc 501 |||||||||||||||||||| Sbjct: 5945830 cagcctcctcctcctctttc 5945849
>gb|AY835966.1| Pristionchus pacificus beta-catenin (bar-1) mRNA, complete cds Length = 2580 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 83 cctcctcctcctctttcctc 64
>gb|AC147212.4| Pan troglodytes BAC clone RP43-126P16 from chromosome 7, complete sequence Length = 150935 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 31291 cctcctcctcctctttcctc 31272 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 31275 cctcctcctcctctttcctc 31256 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 31225 cctcctcctcctctttcctc 31206 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 31196 cctcctcctcctctttcctc 31177 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 31180 cctcctcctcctctttcctc 31161 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 31161 cctcctcctcctctttcctc 31142 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 31142 cctcctcctcctctttcctc 31123 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 31123 cctcctcctcctctttcctc 31104
>gb|AF490843.1| Homo sapiens clone PAC 70L19, HOXC gene cluster Length = 152740 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ggaccctgctgcaaacggga 460 |||||||||||||||||||| Sbjct: 40656 ggaccctgctgcaaacggga 40637
>gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete sequence Length = 171949 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ggaccctgctgcaaacggga 460 |||||||||||||||||||| Sbjct: 100477 ggaccctgctgcaaacggga 100458
>gb|AC020909.9| Homo sapiens chromosome 19 clone CTD-2545M3, complete sequence Length = 100826 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ctcctcctcctctttcctct 505 |||||||||||||||||||| Sbjct: 91020 ctcctcctcctctttcctct 91001
>gb|AC130454.2| Homo sapiens chromosome 16 clone CTA-345G4, complete sequence Length = 260160 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 182323 cctcctcctcctctttcctc 182304
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 cagcctcctcctcctctttc 501 |||||||||||||||||||| Sbjct: 124051 cagcctcctcctcctctttc 124070
>emb|BX294131.7| Zebrafish DNA sequence from clone CH211-254O18, complete sequence Length = 164141 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 359 ttcttcagtaaatctcaacagatggact 386 |||||||||| ||||||||||| ||||| Sbjct: 110390 ttcttcagtatatctcaacagaaggact 110363
>gb|AC157097.5| Mus musculus 6 BAC RP24-369M3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 206335 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 64158 cctcctcctcctctttcctc 64177
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 cagcctcctcctcctctttc 501 |||||||||||||||||||| Sbjct: 175632 cagcctcctcctcctctttc 175651
>ref|XM_313430.2| Anopheles gambiae str. PEST ENSANGP00000020211 (ENSANGG00000017722), partial mRNA Length = 12294 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 cttcgggctgacctcgatga 535 |||||||||||||||||||| Sbjct: 11796 cttcgggctgacctcgatga 11777
>ref|XM_313432.2| Anopheles gambiae str. PEST ENSANGP00000022422 (ENSANGG00000017722), partial mRNA Length = 12213 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 cttcgggctgacctcgatga 535 |||||||||||||||||||| Sbjct: 11715 cttcgggctgacctcgatga 11696
>gb|AC140346.4| Mus musculus BAC clone RP24-260I8 from 16, complete sequence Length = 185587 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcttaaatatcaaattctgagggc 59 |||||||||||||||| ||||||| Sbjct: 79908 tcttaaatatcaaattatgagggc 79885
>gb|AY105851.1| Zea mays PCO072468 mRNA sequence Length = 1545 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 165 cctcctcctcctctttcctc 146
>dbj|AP005140.4| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-65A1, complete sequence Length = 112601 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aaacagaccgatggcatgta 197 |||||||||||||||||||| Sbjct: 22622 aaacagaccgatggcatgta 22641
>gb|AC108805.15| Mus musculus chromosome 9, clone RP23-226G13, complete sequence Length = 242531 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 24555 cctcctcctcctctttcctc 24536
>gb|AC174458.2| Mus musculus BAC clone RP23-282D14 from chromosome 13, complete sequence Length = 205673 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 gcctcctcctcctctttcct 503 |||||||||||||||||||| Sbjct: 23469 gcctcctcctcctctttcct 23450
>emb|CT025753.11| Mouse DNA sequence from clone RP24-340F12 on chromosome 16, complete sequence Length = 231697 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 75707 cctcctcctcctctttcctc 75688
>emb|BX321909.3| Mouse DNA sequence from clone RP23-443D3 on chromosome 2, complete sequence Length = 82074 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 66631 cctcctcctcctctttcctc 66612
>gb|AC015535.11| Mus musculus chromosome 5, clone RP23-39M18, complete sequence Length = 263382 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 51859 cctcctcctcctctttcctc 51878
>gb|AC147476.3| Mus musculus BAC clone RP23-132H10 from 3, complete sequence Length = 197405 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctcttgc 508 ||||||||||||| |||||||||| Sbjct: 118149 cctcctcctcctccttcctcttgc 118172
>gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, complete sequence Length = 206373 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 122353 cctcctcctcctctttcctc 122334
>emb|AL929132.9| Mouse DNA sequence from clone RP23-346G8 on chromosome 2, complete sequence Length = 129438 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 35366 cctcctcctcctctttcctc 35385
>emb|CT025614.7| Mouse DNA sequence from clone RP23-418B18 on chromosome 13, complete sequence Length = 183907 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 gcctcctcctcctctttcct 503 |||||||||||||||||||| Sbjct: 147285 gcctcctcctcctctttcct 147266
>dbj|AP003071.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-554A11, complete sequence Length = 191898 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aaacagaccgatggcatgta 197 |||||||||||||||||||| Sbjct: 181726 aaacagaccgatggcatgta 181745
>emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chromosome 4, complete sequence Length = 232587 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 197645 cctcctcctcctctttcctc 197626
>emb|AL731664.14| Mouse DNA sequence from clone RP23-400M24 on chromosome 4, complete sequence Length = 98653 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cctcctcctcctctttcctc 504 |||||||||||||||||||| Sbjct: 51582 cctcctcctcctctttcctc 51563 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,262,865 Number of Sequences: 3902068 Number of extensions: 7262865 Number of successful extensions: 212702 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 211613 Number of HSP's gapped (non-prelim): 1084 length of query: 653 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 630 effective length of database: 17,143,297,704 effective search space: 10800277553520 effective search space used: 10800277553520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
