ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags20p13 |
|---|---|
| Clone Library Name | barley_pub |
>PIS1_ARATH (Q8LBA6) CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1| (EC 2.7.8.11) (Phosphatidylinositol synthase 1) (PtdIns synthase 1) (PI synthase 1) (AtPIS1) Length = 227 Score = 105 bits (261), Expect = 9e-23 Identities = 52/101 (51%), Positives = 68/101 (67%) Frame = -1 Query: 475 GKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDEKSTSLLNTCRGILK 296 GK+SHKDVK + + L +LYYG R FM +CCV+ EVLYIIL L +S +LLN L Sbjct: 123 GKSSHKDVKDSTSWLFRLYYGNRIFMCYCCVSCEVLYIILLLIAKNQSENLLNVVVATLT 182 Query: 295 ESPLVVFMFISTLIGWALKQVINVIQMKTAAYACVAFDSKR 173 + + F+ TL GW++KQ INVIQMKTAA CV +D ++ Sbjct: 183 QISPLSFLLALTLFGWSMKQTINVIQMKTAADVCVLYDIEK 223
>PIS2_ARATH (Q8GUK6) Probable CDP-diacylglycerol--inositol| 3-phosphatidyltransferase 2 (EC 2.7.8.11) (Phosphatidylinositol synthase 2) (PtdIns synthase 2) (PI synthase 2) (AtPIS2) Length = 225 Score = 104 bits (259), Expect = 1e-22 Identities = 51/103 (49%), Positives = 75/103 (72%), Gaps = 1/103 (0%) Frame = -1 Query: 478 TGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDEKSTSLLNTC-RGI 302 +GKTSHKDVK + + L +LYYG R FM +CCV+ EVLYIIL L ++ +L+N + + Sbjct: 119 SGKTSHKDVKDSTSWLFRLYYGNRMFMGYCCVSCEVLYIILLLIATNQTENLMNVVVKSL 178 Query: 301 LKESPLVVFMFISTLIGWALKQVINVIQMKTAAYACVAFDSKR 173 ++ SPL + + +S + GW++KQ+INVIQMKTAA CV +D ++ Sbjct: 179 MQISPLSLLLALS-IFGWSIKQIINVIQMKTAADVCVLYDIEK 220
>YAT8_SCHPO (Q10153) Hypothetical protein C1D4.08 in chromosome I| Length = 251 Score = 47.4 bits (111), Expect = 2e-05 Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 8/114 (7%) Frame = -1 Query: 475 GKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDEKST----SLLNTCR 308 G +SHK V N +L+LYYG + C A E+ ++ L+L T L Sbjct: 135 GASSHKTVTKKHNWMLRLYYGNNKVLFIFCAANEMFFVALYLLSFTPRTPPKLGYLPVPS 194 Query: 307 GILK--ESPLVVFMFISTLIG--WALKQVINVIQMKTAAYACVAFDSKRGK*AK 158 I E PL ++ L G KQ+INV+Q+ AA A V D ++ + AK Sbjct: 195 FIYSTGELPLSYPTLLAVLCGPICLAKQIINVVQLVNAANALVKMDVEQRRAAK 248
>CDIPT_MOUSE (Q8VDP6) CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC| 2.7.8.11) (Phosphatidylinositol synthase) (PtdIns synthase) (PI synthase) Length = 213 Score = 46.6 bits (109), Expect = 4e-05 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Frame = -1 Query: 475 GKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDEKSTSLLNTCRGILK 296 G SHK + +GN +L++YY RP + C E+ Y +L+L+ Sbjct: 116 GSESHKMIDLSGNPVLRIYYTSRPALFTLCAGNELFYCLLYLFN--------------FS 161 Query: 295 ESPLVVFMFISTLIGWA------LKQVINVIQMKTAAYACVAFDS 179 E PLV + + + W LK VI+VI + TAA A D+ Sbjct: 162 EGPLVGSVGLFRMGLWVTAPIALLKSVISVIHLITAARNMAALDA 206
>CDIPT_RAT (P70500) CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC| 2.7.8.11) (Phosphatidylinositol synthase) (PtdIns synthase) (PI synthase) Length = 213 Score = 46.2 bits (108), Expect = 5e-05 Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Frame = -1 Query: 475 GKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDEKSTSLLNTCRGILK 296 G SHK + +GN +L++YY RP + C E+ Y +L+L+ Sbjct: 116 GSESHKMIDLSGNPVLRIYYTSRPALFTLCAGNELFYCLLYLFN--------------FS 161 Query: 295 ESPLVVFMFISTLIGW------ALKQVINVIQMKTAAYACVAFDS 179 E PLV + + + W LK +I+VI + TAA A D+ Sbjct: 162 EGPLVGSVGLFRMGLWITAPIALLKSIISVIHLVTAARNMAALDA 206
>CDIPT_HUMAN (O14735) CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC| 2.7.8.11) (Phosphatidylinositol synthase) (PtdIns synthase) (PI synthase) Length = 213 Score = 45.4 bits (106), Expect = 8e-05 Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Frame = -1 Query: 475 GKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDEKSTSLLNTCRGILK 296 G SHK + +GN +L++YY RP + C E+ Y +L+L+ Sbjct: 116 GSESHKMIDLSGNPVLRIYYTSRPALFTLCAGNELFYCLLYLFH--------------FS 161 Query: 295 ESPLVVFMFISTLIGWA------LKQVINVIQMKTAAYACVAFDS 179 E PLV + + + W LK +I+VI + TAA A D+ Sbjct: 162 EGPLVGSVGLFRMGLWVTAPIALLKSLISVIHLITAARNMAALDA 206
>PIS_YEAST (P06197) CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC| 2.7.8.11) (Phosphatidylinositol synthase) (PTDINS synthase) (PI synthase) Length = 220 Score = 43.1 bits (100), Expect = 4e-04 Identities = 32/100 (32%), Positives = 44/100 (44%) Frame = -1 Query: 475 GKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDEKSTSLLNTCRGILK 296 GKTSHK V + LL LYY R + C E+ Y L+L L + K Sbjct: 125 GKTSHKSVGEGESRLLHLYYTRRDVLFTICAFNELFYAGLYL-------QLFSNSATFGK 177 Query: 295 ESPLVVFMFISTLIGWALKQVINVIQMKTAAYACVAFDSK 176 + ++ F G+ KQ NV+Q+K AA D+K Sbjct: 178 WTTIISFP------GYVFKQTANVVQLKRAALILADNDAK 211
>COX10_MAGGR (P0C150) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 552 Score = 30.4 bits (67), Expect = 2.7 Identities = 24/64 (37%), Positives = 29/64 (45%) Frame = -1 Query: 436 GLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDEKSTSLLNTCRGILKESPLVVFMFISTL 257 G+L L +G P +AF A VLY +Y K S LNT G V I L Sbjct: 308 GILALQFGVNPTVAFLGAANIVLY--AGIYTPLKRVSALNTWVG-------AVVGGIPPL 358 Query: 256 IGWA 245 +GWA Sbjct: 359 MGWA 362
>UNC47_CAEEL (P34579) Vesicular GABA transporter (Uncoordinated protein 47)| (Protein unc-47) Length = 486 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +3 Query: 102 GMFFLDMPTQMKTKPWWSIFAHLPLFESNATQAYAAVFIWMTLITCLSAHPIR 260 GMF + +P +K WWSI A + + AY + + LI CL + ++ Sbjct: 104 GMFIVGLPIAVKVGGWWSIGAMVGV-------AYVCYWTGVLLIECLYENGVK 149
>MDTG_SALTY (Q8ZQ25) Multidrug resistance protein mdtG| Length = 404 Score = 28.9 bits (63), Expect = 7.8 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 7/88 (7%) Frame = -1 Query: 496 ATGFKCTGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDE------- 338 A G TG S + GLL +YG RP + +++ F + E Sbjct: 141 ALGTLSTGGVSGALLGPLAGGLLADHYGLRPVFFITASVLFICFLLTFFFIRENFLPVSK 200 Query: 337 KSTSLLNTCRGILKESPLVVFMFISTLI 254 K + LK LV+ +F++TLI Sbjct: 201 KEMLHVREVVASLKNPRLVLSLFVTTLI 228
>MDTG_SALTI (Q8Z7L7) Multidrug resistance protein mdtG| Length = 404 Score = 28.9 bits (63), Expect = 7.8 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 7/88 (7%) Frame = -1 Query: 496 ATGFKCTGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDE------- 338 A G TG S + GLL +YG RP + +++ F + E Sbjct: 141 ALGTLSTGGVSGALLGPLAGGLLADHYGLRPVFFITASVLFICFLLTFFFIRENFLPVSK 200 Query: 337 KSTSLLNTCRGILKESPLVVFMFISTLI 254 K + LK LV+ +F++TLI Sbjct: 201 KEMLHVREVVASLKNPRLVLSLFVTTLI 228
>MDTG_SALPA (Q5PGY0) Multidrug resistance protein mdtG| Length = 404 Score = 28.9 bits (63), Expect = 7.8 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 7/88 (7%) Frame = -1 Query: 496 ATGFKCTGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDE------- 338 A G TG S + GLL +YG RP + +++ F + E Sbjct: 141 ALGTLSTGGVSGALLGPLAGGLLADHYGLRPVFFITASVLFICFLLTFFFIRENFLPVSK 200 Query: 337 KSTSLLNTCRGILKESPLVVFMFISTLI 254 K + LK LV+ +F++TLI Sbjct: 201 KEMLHVREVVASLKNPRLVLSLFVTTLI 228
>MDTG_SALCH (Q57QK4) Multidrug resistance protein mdtG| Length = 404 Score = 28.9 bits (63), Expect = 7.8 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 7/88 (7%) Frame = -1 Query: 496 ATGFKCTGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVAXEVLYIILFLYXDE------- 338 A G TG S + GLL +YG RP + +++ F + E Sbjct: 141 ALGTLSTGGVSGALLGPLAGGLLADHYGLRPVFFITASVLFICFLLTFFFIRENFLPVSK 200 Query: 337 KSTSLLNTCRGILKESPLVVFMFISTLI 254 K + LK LV+ +F++TLI Sbjct: 201 KEMLHVREVVASLKNPRLVLSLFVTTLI 228 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,039,528 Number of Sequences: 219361 Number of extensions: 1471714 Number of successful extensions: 3798 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3725 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3796 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
