ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20p12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468382.1| Oryza sativa (japonica cultivar-group), mRNA 410 e-111
2ref|XM_507042.1| PREDICTED Oryza sativa (japonica cultivar-group... 410 e-111
3dbj|AK104489.1| Oryza sativa (japonica cultivar-group) cDNA clon... 410 e-111
4dbj|AK067252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 410 e-111
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 327 3e-86
6dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 327 3e-86
7dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic D... 327 3e-86
8ref|XM_536832.2| PREDICTED: Canis familiaris similar to arginino... 44 0.57
9ref|XM_582084.2| PREDICTED: Bos taurus similar to RNA binding mo... 42 2.3
10gb|BC024153.2| Homo sapiens RNA binding motif protein 10, transc... 42 2.3
11gb|BC004181.2| Homo sapiens RNA binding motif protein 10, transc... 42 2.3
12gb|BC008733.2| Homo sapiens RNA binding motif protein 10, transc... 42 2.3
13gb|BC003089.1| Homo sapiens RNA binding motif protein 10, transc... 42 2.3
14ref|NM_152856.1| Homo sapiens RNA binding motif protein 10 (RBM1... 42 2.3
15ref|NM_005676.3| Homo sapiens RNA binding motif protein 10 (RBM1... 42 2.3
16gb|BC064167.1| Xenopus tropicalis splicing factor, arginine/seri... 42 2.3
17ref|XM_538013.2| PREDICTED: Canis familiaris similar to RNA-bind... 42 2.3
18emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 2.3
19gb|BC045229.1| Xenopus laevis splicing factor, arginine/serine-r... 42 2.3
20gb|BC000681.2| Homo sapiens RNA binding motif protein 10, mRNA (... 42 2.3
21emb|AL513366.11| Human DNA sequence from clone CTD-2522E6 on chr... 42 2.3
22emb|BX537969.1|HSM806098 Homo sapiens mRNA; cDNA DKFZp686E2459 (... 42 2.3
23ref|NM_203997.1| Xenopus tropicalis splicing factor, arginine/se... 42 2.3
24gb|BC004674.1| Mus musculus RNA binding motif protein 10, mRNA (... 42 2.3
25gb|AF403071.1| Gossypium anomalum microsomal omega6 desaturase F... 42 2.3
26ref|NM_145627.1| Mus musculus RNA binding motif protein 10 (Rbm1... 42 2.3
27dbj|D50912.1| Homo sapiens mRNA for KIAA0122 gene, partial cds 42 2.3
28dbj|AK145991.1| Mus musculus 14 days embryo liver cDNA, RIKEN fu... 42 2.3
29dbj|AK153736.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 2.3
30dbj|AK167666.1| Mus musculus 14 days pregnant adult female amnio... 42 2.3
31dbj|AK041871.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 2.3
32dbj|AK089105.1| Mus musculus 2 days neonate thymus thymic cells ... 42 2.3
33gb|BC093519.1| Mus musculus RNA binding motif protein 10, mRNA (... 42 2.3
34gb|AC007391.3| Homo sapiens BAC clone RP11-429J10 from 2, comple... 42 2.3
35ref|NM_152861.3| Rattus norvegicus RNA binding motif protein 10 ... 42 2.3
36dbj|AK122208.1| Mus musculus mRNA for mKIAA0122 protein 42 2.3
37emb|CR760874.2| Xenopus tropicalis finished cDNA, clone TTpA004e12 42 2.3
38emb|AL672073.8| Mouse DNA sequence from clone RP23-333P16 on chr... 42 2.3
39dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 2.3
40emb|AL137421.1|HSM802123 Homo sapiens mRNA; cDNA DKFZp434P072 (f... 42 2.3
41dbj|D83948.1| Rat adult liver mRNA for S1-1 protein, complete cds 42 2.3
42ref|XM_550536.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.0
43ref|XM_550520.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.0
44gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 9.0
45ref|XM_363439.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 9.0
46ref|NM_176858.1| Bos taurus alkaline phosphatase, liver/bone/kid... 40 9.0
47gb|CP000321.1| Nitrobacter hamburgensis X14 plasmid 2, complete ... 40 9.0
48emb|BX069388.1|CNS09PPC Single read from an extremity of a full-... 40 9.0
49emb|BX069387.1|CNS09PPB Single read from an extremity of a full-... 40 9.0
50emb|BX066740.1|CNS09NNS Single read from an extremity of a full-... 40 9.0
51emb|AL591382.3| Zebrafish DNA sequence from clone BUSM1-105L16 i... 40 9.0
52emb|AL591497.2| Zebrafish DNA sequence from clone BUSM1-173M20 i... 40 9.0
53gb|AE012048.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 9.0
54dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 9.0
55gb|AC008836.6|AC008836 Homo sapiens chromosome 5 clone CTD-2150D... 40 9.0
56dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
57gb|AC069019.8|AC069019 Mus musculus BAC RP23-455N13 (Roswell Pa... 40 9.0
58dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
59dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
60dbj|AK063112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.0
61emb|CR847549.21| Zebrafish DNA sequence from clone CH211-260H7 i... 40 9.0
62emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chrom... 40 9.0
63gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 9.0
64emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 ... 40 9.0
65emb|BX284626.3| Mouse DNA sequence from clone RP23-76P19 on chro... 40 9.0
66gb|AC171004.2| Mus musculus BAC clone RP23-67N16 from chromosome... 40 9.0
67gb|DQ173584.1| Pan troglodytes isolate CMP03 G18MC anonymous int... 40 9.0
68gb|M18443.1|BOVAP Bovine alkaline phosphatase (AP) mRNA, complet... 40 9.0 
>ref|XM_468382.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1327

 Score =  410 bits (207), Expect = e-111
 Identities = 300/331 (90%)
 Strand = Plus / Minus

                                                                       
Query: 305 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 854

                                                                       
Query: 365 ccgtcgtagagcacccgggcgccgaccacgttgccgcagcgctggaacgcgtcggtgagc 424
           ||||||||||||||||||||||||||||||||||||||   |||||||   || || |||
Sbjct: 853 ccgtcgtagagcacccgggcgccgaccacgttgccgcacttctggaacatctccgtcagc 794

                                                                       
Query: 425 atctccggggtgaccgtccacgacaggttgcccacgaagagcttgtgctccgtctccggg 484
           ||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 793 atctccgaggtgaccgtccacgacaggttgccgacgaacagcttgtgctcagtctccggg 734

                                                                       
Query: 485 tacagcggcgccttgggcttgggcctgtcggccatgttcaccctcatcgtgcgcccgctg 544
           |||||||||  ||| ||||||||| |||| || | ||||||||||||||||||||| |||
Sbjct: 733 tacagcggcagcttcggcttgggcttgtccgcgaagttcaccctcatcgtgcgcccactg 674

                                                                       
Query: 545 tacagggtgccgtccaggttcttgatgacacgctcgcagtcctcgagcgtgctcatcgtc 604
           |||||| ||||||| ||||||||||| ||  |||||||||| ||||  ||||||||||||
Sbjct: 673 tacaggctgccgtcgaggttcttgatcacttgctcgcagtcttcgatggtgctcatcgtc 614

                                          
Query: 605 acgaaggcgaagccccggctcctccccgtcg 635
           ||||| |||||||| ||||||||||| ||||
Sbjct: 613 acgaacgcgaagcctcggctcctccctgtcg 583



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 247 gttgaccctgatctccctgccttcaatctccgttccgttgagcg 290
           |||||||| ||||||||||||||| |  |||||||| |||||||
Sbjct: 971 gttgacccggatctccctgccttctagttccgttccattgagcg 928
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>ref|XM_507042.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1293_E04.28
           mRNA
          Length = 1332

 Score =  410 bits (207), Expect = e-111
 Identities = 300/331 (90%)
 Strand = Plus / Minus

                                                                       
Query: 305 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 855

                                                                       
Query: 365 ccgtcgtagagcacccgggcgccgaccacgttgccgcagcgctggaacgcgtcggtgagc 424
           ||||||||||||||||||||||||||||||||||||||   |||||||   || || |||
Sbjct: 854 ccgtcgtagagcacccgggcgccgaccacgttgccgcacttctggaacatctccgtcagc 795

                                                                       
Query: 425 atctccggggtgaccgtccacgacaggttgcccacgaagagcttgtgctccgtctccggg 484
           ||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 794 atctccgaggtgaccgtccacgacaggttgccgacgaacagcttgtgctcagtctccggg 735

                                                                       
Query: 485 tacagcggcgccttgggcttgggcctgtcggccatgttcaccctcatcgtgcgcccgctg 544
           |||||||||  ||| ||||||||| |||| || | ||||||||||||||||||||| |||
Sbjct: 734 tacagcggcagcttcggcttgggcttgtccgcgaagttcaccctcatcgtgcgcccactg 675

                                                                       
Query: 545 tacagggtgccgtccaggttcttgatgacacgctcgcagtcctcgagcgtgctcatcgtc 604
           |||||| ||||||| ||||||||||| ||  |||||||||| ||||  ||||||||||||
Sbjct: 674 tacaggctgccgtcgaggttcttgatcacttgctcgcagtcttcgatggtgctcatcgtc 615

                                          
Query: 605 acgaaggcgaagccccggctcctccccgtcg 635
           ||||| |||||||| ||||||||||| ||||
Sbjct: 614 acgaacgcgaagcctcggctcctccctgtcg 584



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 247 gttgaccctgatctccctgccttcaatctccgttccgttgagcg 290
           |||||||| ||||||||||||||| |  |||||||| |||||||
Sbjct: 972 gttgacccggatctccctgccttctagttccgttccattgagcg 929
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>dbj|AK104489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B08, full
           insert sequence
          Length = 1328

 Score =  410 bits (207), Expect = e-111
 Identities = 300/331 (90%)
 Strand = Plus / Minus

                                                                       
Query: 305 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 854

                                                                       
Query: 365 ccgtcgtagagcacccgggcgccgaccacgttgccgcagcgctggaacgcgtcggtgagc 424
           ||||||||||||||||||||||||||||||||||||||   |||||||   || || |||
Sbjct: 853 ccgtcgtagagcacccgggcgccgaccacgttgccgcacttctggaacatctccgtcagc 794

                                                                       
Query: 425 atctccggggtgaccgtccacgacaggttgcccacgaagagcttgtgctccgtctccggg 484
           ||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 793 atctccgaggtgaccgtccacgacaggttgccgacgaacagcttgtgctcagtctccggg 734

                                                                       
Query: 485 tacagcggcgccttgggcttgggcctgtcggccatgttcaccctcatcgtgcgcccgctg 544
           |||||||||  ||| ||||||||| |||| || | ||||||||||||||||||||| |||
Sbjct: 733 tacagcggcagcttcggcttgggcttgtccgcgaagttcaccctcatcgtgcgcccactg 674

                                                                       
Query: 545 tacagggtgccgtccaggttcttgatgacacgctcgcagtcctcgagcgtgctcatcgtc 604
           |||||| ||||||| ||||||||||| ||  |||||||||| ||||  ||||||||||||
Sbjct: 673 tacaggctgccgtcgaggttcttgatcacttgctcgcagtcttcgatggtgctcatcgtc 614

                                          
Query: 605 acgaaggcgaagccccggctcctccccgtcg 635
           ||||| |||||||| ||||||||||| ||||
Sbjct: 613 acgaacgcgaagcctcggctcctccctgtcg 583



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 247 gttgaccctgatctccctgccttcaatctccgttccgttgagcg 290
           |||||||| ||||||||||||||| |  |||||||| |||||||
Sbjct: 971 gttgacccggatctccctgccttctagttccgttccattgagcg 928
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>dbj|AK067252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L06, full
           insert sequence
          Length = 1332

 Score =  410 bits (207), Expect = e-111
 Identities = 300/331 (90%)
 Strand = Plus / Minus

                                                                       
Query: 305 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 855

                                                                       
Query: 365 ccgtcgtagagcacccgggcgccgaccacgttgccgcagcgctggaacgcgtcggtgagc 424
           ||||||||||||||||||||||||||||||||||||||   |||||||   || || |||
Sbjct: 854 ccgtcgtagagcacccgggcgccgaccacgttgccgcacttctggaacatctccgtcagc 795

                                                                       
Query: 425 atctccggggtgaccgtccacgacaggttgcccacgaagagcttgtgctccgtctccggg 484
           ||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 794 atctccgaggtgaccgtccacgacaggttgccgacgaacagcttgtgctcagtctccggg 735

                                                                       
Query: 485 tacagcggcgccttgggcttgggcctgtcggccatgttcaccctcatcgtgcgcccgctg 544
           |||||||||  ||| ||||||||| |||| || | ||||||||||||||||||||| |||
Sbjct: 734 tacagcggcagcttcggcttgggcttgtccgcgaagttcaccctcatcgtgcgcccactg 675

                                                                       
Query: 545 tacagggtgccgtccaggttcttgatgacacgctcgcagtcctcgagcgtgctcatcgtc 604
           |||||| ||||||| ||||||||||| ||  |||||||||| ||||  ||||||||||||
Sbjct: 674 tacaggctgccgtcgaggttcttgatcacttgctcgcagtcttcgatggtgctcatcgtc 615

                                          
Query: 605 acgaaggcgaagccccggctcctccccgtcg 635
           ||||| |||||||| ||||||||||| ||||
Sbjct: 614 acgaacgcgaagcctcggctcctccctgtcg 584



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 247 gttgaccctgatctccctgccttcaatctccgttccgttgagcg 290
           |||||||| ||||||||||||||| |  |||||||| |||||||
Sbjct: 972 gttgacccggatctccctgccttctagttccgttccattgagcg 929
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  327 bits (165), Expect = 3e-86
 Identities = 225/245 (91%)
 Strand = Plus / Minus

                                                                            
Query: 305      tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 364
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34942493 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 34942434

                                                                            
Query: 365      ccgtcgtagagcacccgggcgccgaccacgttgccgcagcgctggaacgcgtcggtgagc 424
                ||||||||||||||||||||||||||||||||||||||   |||||||   || || |||
Sbjct: 34942433 ccgtcgtagagcacccgggcgccgaccacgttgccgcacttctggaacatctccgtcagc 34942374

                                                                            
Query: 425      atctccggggtgaccgtccacgacaggttgcccacgaagagcttgtgctccgtctccggg 484
                ||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 34942373 atctccgaggtgaccgtccacgacaggttgccgacgaacagcttgtgctcagtctccggg 34942314

                                                                            
Query: 485      tacagcggcgccttgggcttgggcctgtcggccatgttcaccctcatcgtgcgcccgctg 544
                |||||||||  ||| ||||||||| |||| || | ||||||||||||||||||||| |||
Sbjct: 34942313 tacagcggcagcttcggcttgggcttgtccgcgaagttcaccctcatcgtgcgcccactg 34942254

                     
Query: 545      tacag 549
                |||||
Sbjct: 34942253 tacag 34942249



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                            
Query: 552      tgccgtccaggttcttgatgacacgctcgcagtcctcgagcgtgctcatcgtcacgaagg 611
                ||||||| ||||||||||| ||  |||||||||| ||||  ||||||||||||||||| |
Sbjct: 34942151 tgccgtcgaggttcttgatcacttgctcgcagtcttcgatggtgctcatcgtcacgaacg 34942092

                                        
Query: 612      cgaagccccggctcctccccgtcg 635
                ||||||| ||||||||||| ||||
Sbjct: 34942091 cgaagcctcggctcctccctgtcg 34942068



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 247      gttgaccctgatctccctgccttc 270
                |||||||| |||||||||||||||
Sbjct: 34942892 gttgacccggatctccctgccttc 34942869
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>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0643F09
          Length = 161001

 Score =  327 bits (165), Expect = 3e-86
 Identities = 225/245 (91%)
 Strand = Plus / Minus

                                                                        
Query: 305  tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2834 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 2775

                                                                        
Query: 365  ccgtcgtagagcacccgggcgccgaccacgttgccgcagcgctggaacgcgtcggtgagc 424
            ||||||||||||||||||||||||||||||||||||||   |||||||   || || |||
Sbjct: 2774 ccgtcgtagagcacccgggcgccgaccacgttgccgcacttctggaacatctccgtcagc 2715

                                                                        
Query: 425  atctccggggtgaccgtccacgacaggttgcccacgaagagcttgtgctccgtctccggg 484
            ||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 2714 atctccgaggtgaccgtccacgacaggttgccgacgaacagcttgtgctcagtctccggg 2655

                                                                        
Query: 485  tacagcggcgccttgggcttgggcctgtcggccatgttcaccctcatcgtgcgcccgctg 544
            |||||||||  ||| ||||||||| |||| || | ||||||||||||||||||||| |||
Sbjct: 2654 tacagcggcagcttcggcttgggcttgtccgcgaagttcaccctcatcgtgcgcccactg 2595

                 
Query: 545  tacag 549
            |||||
Sbjct: 2594 tacag 2590



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                        
Query: 552  tgccgtccaggttcttgatgacacgctcgcagtcctcgagcgtgctcatcgtcacgaagg 611
            ||||||| ||||||||||| ||  |||||||||| ||||  ||||||||||||||||| |
Sbjct: 2492 tgccgtcgaggttcttgatcacttgctcgcagtcttcgatggtgctcatcgtcacgaacg 2433

                                    
Query: 612  cgaagccccggctcctccccgtcg 635
            ||||||| ||||||||||| ||||
Sbjct: 2432 cgaagcctcggctcctccctgtcg 2409



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 247  gttgaccctgatctccctgccttc 270
            |||||||| |||||||||||||||
Sbjct: 3233 gttgacccggatctccctgccttc 3210
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>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1293_E04
          Length = 118192

 Score =  327 bits (165), Expect = 3e-86
 Identities = 225/245 (91%)
 Strand = Plus / Minus

                                                                          
Query: 305    tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 364
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101990 tccatctcctccttggtggagtagcagacgaagccgtagccacgggaccggccggtctcg 101931

                                                                          
Query: 365    ccgtcgtagagcacccgggcgccgaccacgttgccgcagcgctggaacgcgtcggtgagc 424
              ||||||||||||||||||||||||||||||||||||||   |||||||   || || |||
Sbjct: 101930 ccgtcgtagagcacccgggcgccgaccacgttgccgcacttctggaacatctccgtcagc 101871

                                                                          
Query: 425    atctccggggtgaccgtccacgacaggttgcccacgaagagcttgtgctccgtctccggg 484
              ||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 101870 atctccgaggtgaccgtccacgacaggttgccgacgaacagcttgtgctcagtctccggg 101811

                                                                          
Query: 485    tacagcggcgccttgggcttgggcctgtcggccatgttcaccctcatcgtgcgcccgctg 544
              |||||||||  ||| ||||||||| |||| || | ||||||||||||||||||||| |||
Sbjct: 101810 tacagcggcagcttcggcttgggcttgtccgcgaagttcaccctcatcgtgcgcccactg 101751

                   
Query: 545    tacag 549
              |||||
Sbjct: 101750 tacag 101746



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                          
Query: 552    tgccgtccaggttcttgatgacacgctcgcagtcctcgagcgtgctcatcgtcacgaagg 611
              ||||||| ||||||||||| ||  |||||||||| ||||  ||||||||||||||||| |
Sbjct: 101648 tgccgtcgaggttcttgatcacttgctcgcagtcttcgatggtgctcatcgtcacgaacg 101589

                                      
Query: 612    cgaagccccggctcctccccgtcg 635
              ||||||| ||||||||||| ||||
Sbjct: 101588 cgaagcctcggctcctccctgtcg 101565



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 247    gttgaccctgatctccctgccttc 270
              |||||||| |||||||||||||||
Sbjct: 102389 gttgacccggatctccctgccttc 102366
to top
>ref|XM_536832.2| PREDICTED: Canis familiaris similar to argininosuccinate lyase
           isoform 1 (LOC479704), mRNA
          Length = 1487

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 301 ctggtccatctcctccttggtg 322
           ||||||||||||||||||||||
Sbjct: 278 ctggtccatctcctccttggtg 257
to top
>ref|XM_582084.2| PREDICTED: Bos taurus similar to RNA binding motif protein 10
           isoform 1 (LOC505749), mRNA
          Length = 2515

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 38  acgaaggcgaagccccggctc 18
to top
>gb|BC024153.2| Homo sapiens RNA binding motif protein 10, transcript variant 1,
           mRNA (cDNA clone MGC:16349 IMAGE:3845258), complete cds
          Length = 3041

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 535 acgaaggcgaagccccggctc 515
to top
>gb|BC004181.2| Homo sapiens RNA binding motif protein 10, transcript variant 1,
           mRNA (cDNA clone MGC:2794 IMAGE:2961094), complete cds
          Length = 3409

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 873 acgaaggcgaagccccggctc 853
to top
>gb|BC008733.2| Homo sapiens RNA binding motif protein 10, transcript variant 1,
           mRNA (cDNA clone MGC:997 IMAGE:3163064), complete cds
          Length = 3414

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 905 acgaaggcgaagccccggctc 885
to top
>gb|BC003089.1| Homo sapiens RNA binding motif protein 10, transcript variant 2,
           mRNA (cDNA clone MGC:1132 IMAGE:3536058), complete cds
          Length = 3143

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 628 acgaaggcgaagccccggctc 608
to top
>ref|NM_152856.1| Homo sapiens RNA binding motif protein 10 (RBM10), transcript
           variant 2, mRNA
          Length = 3190

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 675 acgaaggcgaagccccggctc 655
to top
>ref|NM_005676.3| Homo sapiens RNA binding motif protein 10 (RBM10), transcript
           variant 1, mRNA
          Length = 3415

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 906 acgaaggcgaagccccggctc 886
to top
>gb|BC064167.1| Xenopus tropicalis splicing factor, arginine/serine-rich 2 (SC-35),
           mRNA (cDNA clone MGC:75633 IMAGE:5379445), complete cds
          Length = 1762

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 303 acgaaggcgaagccccggctc 283
to top
>ref|XM_538013.2| PREDICTED: Canis familiaris similar to RNA-binding protein 10 (RNA
           binding motif protein 10) (DXS8237E), transcript variant
           1 (LOC480895), mRNA
          Length = 3411

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 930 acgaaggcgaagccccggctc 910
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 400     gcagcgctggaacgcgtcggt 420
               |||||||||||||||||||||
Sbjct: 3592587 gcagcgctggaacgcgtcggt 3592567
to top
>gb|BC045229.1| Xenopus laevis splicing factor, arginine/serine-rich 2, mRNA (cDNA
           clone MGC:53177 IMAGE:5543005), complete cds
          Length = 1663

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 283 acgaaggcgaagccccggctc 263
to top
>gb|BC000681.2| Homo sapiens RNA binding motif protein 10, mRNA (cDNA clone
           IMAGE:3349287), partial cds
          Length = 1626

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 145 acgaaggcgaagccccggctc 125
to top
>emb|AL513366.11| Human DNA sequence from clone CTD-2522E6 on chromosome X Contains the RGN
              gene for regucalcin (senescence marker protein-30) (RC,
              SMP30), the gene for neuronal protein 17.3 (P17.3), the
              RBM10 gene for RNA binding motif protein 10 (MGC997,
              MGC1132, DXS8237E, KIAA0122), an inositol
              1,3,4-triphosphate 5/6 kinase (ITPK1) pseudogene, the UBE1
              gene for ubiquitin-activating enzyme E1 (A1S9T and BN75
              temperature sensitivity complementing) (A1S9, A1ST, GXP1,
              A1S9T, UBE1X, MGC4781), the 5' UTR of the PCTK1 gene for
              PCTAIRE protein kinase 1 and five CpG islands, complete
              sequence
          Length = 145456

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 605    acgaaggcgaagccccggctc 625
              |||||||||||||||||||||
Sbjct: 100088 acgaaggcgaagccccggctc 100068
to top
>emb|BX537969.1|HSM806098 Homo sapiens mRNA; cDNA DKFZp686E2459 (from clone DKFZp686E2459);
           complete cds
          Length = 3408

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 902 acgaaggcgaagccccggctc 882
to top
>ref|NM_203997.1| Xenopus tropicalis splicing factor, arginine/serine-rich 2 (SC-35)
           (sfrs2), mRNA
          Length = 1762

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 303 acgaaggcgaagccccggctc 283
to top
>gb|BC004674.1| Mus musculus RNA binding motif protein 10, mRNA (cDNA clone
           MGC:7826 IMAGE:3500403), complete cds
          Length = 3127

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 629 acgaaggcgaagccccggctc 609
to top
>gb|AF403071.1| Gossypium anomalum microsomal omega6 desaturase FAD2-1 (FAD2) gene,
           partial cds
          Length = 1275

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 203 tgaagaaacgatcaagctctctagtatct 231
           |||| ||||||| ||||||||||||||||
Sbjct: 336 tgaataaacgatgaagctctctagtatct 308
to top
>ref|NM_145627.1| Mus musculus RNA binding motif protein 10 (Rbm10), mRNA
          Length = 3127

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 629 acgaaggcgaagccccggctc 609
to top
>dbj|D50912.1| Homo sapiens mRNA for KIAA0122 gene, partial cds
          Length = 3244

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 771 acgaaggcgaagccccggctc 751
to top
>dbj|AK145991.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:I530023A20 product:RNA binding motif
           protein 10, full insert sequence
          Length = 3415

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 944 acgaaggcgaagccccggctc 924
to top
>dbj|AK153736.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630065L18 product:RNA binding motif
            protein 10, full insert sequence
          Length = 3699

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 605  acgaaggcgaagccccggctc 625
            |||||||||||||||||||||
Sbjct: 1232 acgaaggcgaagccccggctc 1212
to top
>dbj|AK167666.1| Mus musculus 14 days pregnant adult female amnion cDNA, RIKEN
           full-length enriched library, clone:I530027M13
           product:RNA binding motif protein 10, full insert
           sequence
          Length = 3161

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 691 acgaaggcgaagccccggctc 671
to top
>dbj|AK041871.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630043D22 product:RNA-BINDING PROTEIN 10
           (RNA BINDING MOTIF PROTEIN 10) (S1-1 PROTEIN) homolog
           [Rattus norvegicus], full insert sequence
          Length = 2063

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 688 acgaaggcgaagccccggctc 668
to top
>dbj|AK089105.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430039K10
           product:RNA-BINDING PROTEIN 10 (RNA BINDING MOTIF
           PROTEIN 10) (S1-1 PROTEIN) homolog [Rattus norvegicus],
           full insert sequence
          Length = 2992

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 524 acgaaggcgaagccccggctc 504
to top
>gb|BC093519.1| Mus musculus RNA binding motif protein 10, mRNA (cDNA clone
           IMAGE:3153178), partial cds
          Length = 2124

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 645 acgaaggcgaagccccggctc 625
to top
>gb|AC007391.3| Homo sapiens BAC clone RP11-429J10 from 2, complete sequence
          Length = 183991

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 215   caagctctctagtatctcttc 235
             |||||||||||||||||||||
Sbjct: 49855 caagctctctagtatctcttc 49835
to top
>ref|NM_152861.3| Rattus norvegicus RNA binding motif protein 10 (Rbm10), mRNA
          Length = 3115

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 632 acgaaggcgaagccccggctc 612
to top
>dbj|AK122208.1| Mus musculus mRNA for mKIAA0122 protein
          Length = 5111

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 631 acgaaggcgaagccccggctc 611
to top
>emb|CR760874.2| Xenopus tropicalis finished cDNA, clone TTpA004e12
          Length = 1649

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 211 acgaaggcgaagccccggctc 191
to top
>emb|AL672073.8| Mouse DNA sequence from clone RP23-333P16 on chromosome X, complete
              sequence
          Length = 216812

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 605    acgaaggcgaagccccggctc 625
              |||||||||||||||||||||
Sbjct: 209968 acgaaggcgaagccccggctc 209948
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 355     gccggtctcgccgtcgtagagcacc 379
               |||||||| ||||||||||||||||
Sbjct: 3285887 gccggtcttgccgtcgtagagcacc 3285911
to top
>emb|AL137421.1|HSM802123 Homo sapiens mRNA; cDNA DKFZp434P072 (from clone DKFZp434P072);
           partial cds
          Length = 3301

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 809 acgaaggcgaagccccggctc 789
to top
>dbj|D83948.1| Rat adult liver mRNA for S1-1 protein, complete cds
          Length = 3123

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 acgaaggcgaagccccggctc 625
           |||||||||||||||||||||
Sbjct: 640 acgaaggcgaagccccggctc 620
to top
>ref|XM_550536.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 845

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 357 cggtctcgccgtcgtagagc 376
           ||||||||||||||||||||
Sbjct: 470 cggtctcgccgtcgtagagc 451
to top
>ref|XM_550520.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 847

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 357 cggtctcgccgtcgtagagc 376
           ||||||||||||||||||||
Sbjct: 468 cggtctcgccgtcgtagagc 449
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 295     gatggcctggtccatctcctccttggtg 322
               ||||||||||||||||  ||||||||||
Sbjct: 2423159 gatggcctggtccatcgactccttggtg 2423186
to top
>ref|XM_363439.1| Magnaporthe grisea 70-15 hypothetical protein (MG01365.4) partial
           mRNA
          Length = 1713

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 347 cgggaccggccggtctcgccgtcg 370
           ||||||||||||| ||||||||||
Sbjct: 56  cgggaccggccggcctcgccgtcg 79
to top
>ref|NM_176858.1| Bos taurus alkaline phosphatase, liver/bone/kidney (ALPL), mRNA
          Length = 1931

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  cgatggcctggtccatctcc 313
            ||||||||||||||||||||
Sbjct: 1281 cgatggcctggtccatctcc 1262
to top
>gb|CP000321.1| Nitrobacter hamburgensis X14 plasmid 2, complete sequence
          Length = 188318

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   gttccgttgagcgtctcgatggcc 301
             ||||| ||||||||||||||||||
Sbjct: 53428 gttcctttgagcgtctcgatggcc 53451
to top
>emb|BX069388.1|CNS09PPC Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC6AB07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 407

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 435 tgaccgtccacgacaggttgcccacgaa 462
           ||||||||||||  ||||||||||||||
Sbjct: 159 tgaccgtccacggtaggttgcccacgaa 186
to top
>emb|BX069387.1|CNS09PPB Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC6AB07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 948

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 435 tgaccgtccacgacaggttgcccacgaa 462
           ||||||||||||  ||||||||||||||
Sbjct: 845 tgaccgtccacggtaggttgcccacgaa 818
to top
>emb|BX066740.1|CNS09NNS Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC50AF04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 427

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 435 tgaccgtccacgacaggttgcccacgaa 462
           ||||||||||||  ||||||||||||||
Sbjct: 245 tgaccgtccacggtaggttgcccacgaa 272
to top
>emb|AL591382.3| Zebrafish DNA sequence from clone BUSM1-105L16 in linkage group 7
             Contains the nitr2d_1 gene for novel immune-type receptor
             2d, allele 1, the nitr1o_3 gene for novel immune-type
             receptor 1o, allele 3, the nitr1m_2 gene for novel
             immune-type receptor 1m, allele 2, the nitr1l_2 gene for
             novel immune-type receptor 1l, allele 2, a novel
             immune-type receptor 1 pseudogene, the nitr5_4 gene for
             novel immune-type receptor 5, allele 4, the nitr4a_2 gene
             for novel immune-type receptor 4a, allele 2, the nitr1i_2
             gene for novel immune-type receptor 1i, allele 2, the
             nitr1j_1 gene for novel immune-type receptor 1j, allele 1,
             the nitr1g_1 gene for novel immune-type receptor 1g,
             allele 1, a novel immune-type receptor 4b pseudogene, a
             novel gene, the nitr1k_3 gene for novel immune-type
             receptor 1k, allele 3 and a CpG island, complete sequence
          Length = 98934

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   tgctctgtataattttgcat 152
             ||||||||||||||||||||
Sbjct: 83757 tgctctgtataattttgcat 83738
to top
>emb|AL591497.2| Zebrafish DNA sequence from clone BUSM1-173M20 in linkage group 7
             Contains the nitr1.14, nitr1.17, nitr1.18, nitr2.4,
             nitr2.6, nitr3r.2, nitr1.13, nitr1.15, nitr1.16, nitr2.5,
             nitr3.4 and nitr3r.1 genes for novel immune-type receptors
             and a nitr pseudogene, complete sequence
          Length = 127998

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   tgctctgtataattttgcat 152
             ||||||||||||||||||||
Sbjct: 14686 tgctctgtataattttgcat 14667
to top
>gb|AE012048.1| Xanthomonas axonopodis pv. citri str. 306,  section 426 of 469 of the
            complete genome
          Length = 12239

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 390  ccacgttgccgcagcgctgg 409
            ||||||||||||||||||||
Sbjct: 7183 ccacgttgccgcagcgctgg 7202
to top
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 487     cagcggcgccttgggcttgg 506
               ||||||||||||||||||||
Sbjct: 1241201 cagcggcgccttgggcttgg 1241220
to top
>gb|AC008836.6|AC008836 Homo sapiens chromosome 5 clone CTD-2150D9, complete sequence
          Length = 157492

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 212   gatcaagctctctagtatctcttc 235
             |||||||||||||||| |||||||
Sbjct: 80041 gatcaagctctctagtgtctcttc 80064
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 357     cggtctcgccgtcgtagagc 376
               ||||||||||||||||||||
Sbjct: 1002828 cggtctcgccgtcgtagagc 1002847



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    cggtctcgccgtcgtagagc 376
              ||||||||||||||||||||
Sbjct: 932618 cggtctcgccgtcgtagagc 932637
to top
>gb|AC069019.8|AC069019 Mus musculus  BAC RP23-455N13 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 196175

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   gtttatttgttgctctgtat 142
             ||||||||||||||||||||
Sbjct: 97285 gtttatttgttgctctgtat 97266
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>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0062J13
          Length = 152837

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   cggtctcgccgtcgtagagc 376
             ||||||||||||||||||||
Sbjct: 65701 cggtctcgccgtcgtagagc 65720
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>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0019F11
          Length = 123673

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    cggtctcgccgtcgtagagc 376
              ||||||||||||||||||||
Sbjct: 113513 cggtctcgccgtcgtagagc 113532
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>dbj|AK063112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-D09, full
           insert sequence
          Length = 847

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 357 cggtctcgccgtcgtagagc 376
           ||||||||||||||||||||
Sbjct: 468 cggtctcgccgtcgtagagc 449
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>emb|CR847549.21| Zebrafish DNA sequence from clone CH211-260H7 in linkage group 8,
            complete sequence
          Length = 80961

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 94   tcagaatgtgctttcatgag 113
            ||||||||||||||||||||
Sbjct: 5537 tcagaatgtgctttcatgag 5518
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>emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chromosome 4, complete sequence
          Length = 221208

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     tgttatttgttgctctcagaatgt 102
              |||| |||||||||||||||||||
Sbjct: 147276 tgttctttgttgctctcagaatgt 147253
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 414     cgtcggtgagcatctccggg 433
               ||||||||||||||||||||
Sbjct: 1734815 cgtcggtgagcatctccggg 1734834
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>emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 in linkage group 7,
              complete sequence
          Length = 112025

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    tgctctgtataattttgcat 152
              ||||||||||||||||||||
Sbjct: 101774 tgctctgtataattttgcat 101793
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>emb|BX284626.3| Mouse DNA sequence from clone RP23-76P19 on chromosome 11, complete
              sequence
          Length = 182810

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    gtttatttgttgctctgtat 142
              ||||||||||||||||||||
Sbjct: 117813 gtttatttgttgctctgtat 117832
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>gb|AC171004.2| Mus musculus BAC clone RP23-67N16 from chromosome 13, complete sequence
          Length = 213660

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    ctcagaatgtgctttcatga 112
             ||||||||||||||||||||
Sbjct: 62466 ctcagaatgtgctttcatga 62447
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>gb|DQ173584.1| Pan troglodytes isolate CMP03 G18MC anonymous intergenic region
           genomic sequence
          Length = 1795

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 agctctctagtatctcttcc 236
           ||||||||||||||||||||
Sbjct: 514 agctctctagtatctcttcc 495
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>gb|M18443.1|BOVAP Bovine alkaline phosphatase (AP) mRNA, complete cds
          Length = 1931

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  cgatggcctggtccatctcc 313
            ||||||||||||||||||||
Sbjct: 1281 cgatggcctggtccatctcc 1262


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,041,166
Number of Sequences: 3902068
Number of extensions: 4041166
Number of successful extensions: 85824
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85316
Number of HSP's gapped (non-prelim): 501
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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