>ATC2_YEAST (P38929) Calcium-transporting ATPase 2 (EC 3.6.3.8) (Vacuolar|
            Ca(2+)-ATPase)
          Length = 1173

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 58   ERLPRGHSSRSNSTAYGKPLGSGSSFQLHLLITYI*XFFGPNI 186
            +R PRG S+   S +  K + S ++ QL  ++T+I  F+GP +
Sbjct: 959  DRKPRGRSTSLISVSTWKMILSQATLQL--IVTFILHFYGPEL 999

>LRRK1_HUMAN (Q38SD2) Leucine-rich repeat serine/threonine-protein kinase 1 (EC|
            2.7.11.1)
          Length = 2038

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = -2

Query: 328  VCFAEVXGEEPXRXXVVW----QSRSCCARXRMMHDLCLRAACXVPDPFR 191
            VC +E  GEE     VVW    ++ S        + LC R  C VP P R
Sbjct: 1763 VCSSEGRGEE-----VVWCLDDKANSLVMYHSTTYQLCARYFCGVPSPLR 1807

>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)|
          Length = 1670

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 153  NLYLVFFWS*YTSLKGSGTXQAALKQRSCIIRXRAQQLRDCH 278
            +L+  F +  +TS    GT QA     SC+   RA    +CH
Sbjct: 1576 SLWKGFSFIMFTSAGSEGTGQALASPGSCLEEFRASPFLECH 1617


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,415,381
Number of Sequences: 219361
Number of extensions: 772099
Number of successful extensions: 1323
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)