| Clone Name | rbags21e18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 2e-08 Identities = 63/73 (86%) Strand = Plus / Minus Query: 91 aactctacagcctacggcaaacctctcggaagcggttccagcttccagctacatctgctn 150 |||||||||| |||||||||||||||| ||| ||||||| |||| ||||||||| | Sbjct: 3947781 aactctacagtctacggcaaacctctcagaacaggttccaagatccaactacatctggtt 3947722 Query: 151 ataacctatattt 163 ||||||||||||| Sbjct: 3947721 ataacctatattt 3947709
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 67.9 bits (34), Expect = 2e-08 Identities = 63/73 (86%) Strand = Plus / Plus Query: 91 aactctacagcctacggcaaacctctcggaagcggttccagcttccagctacatctgctn 150 |||||||||| |||||||||||||||| ||| ||||||| |||| ||||||||| | Sbjct: 151587 aactctacagtctacggcaaacctctcagaacaggttccaagatccaactacatctggtt 151646 Query: 151 ataacctatattt 163 ||||||||||||| Sbjct: 151647 ataacctatattt 151659
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 2e-08 Identities = 63/73 (86%) Strand = Plus / Minus Query: 91 aactctacagcctacggcaaacctctcggaagcggttccagcttccagctacatctgctn 150 |||||||||| |||||||||||||||| ||| ||||||| |||| ||||||||| | Sbjct: 3947892 aactctacagtctacggcaaacctctcagaacaggttccaagatccaactacatctggtt 3947833 Query: 151 ataacctatattt 163 ||||||||||||| Sbjct: 3947832 ataacctatattt 3947820
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 67.9 bits (34), Expect = 2e-08 Identities = 63/73 (86%) Strand = Plus / Minus Query: 91 aactctacagcctacggcaaacctctcggaagcggttccagcttccagctacatctgctn 150 |||||||||| |||||||||||||||| ||| ||||||| |||| ||||||||| | Sbjct: 154254 aactctacagtctacggcaaacctctcagaacaggttccaagatccaactacatctggtt 154195 Query: 151 ataacctatattt 163 ||||||||||||| Sbjct: 154194 ataacctatattt 154182
>dbj|AK063978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-C08, full insert sequence Length = 1279 Score = 67.9 bits (34), Expect = 2e-08 Identities = 63/73 (86%) Strand = Plus / Minus Query: 91 aactctacagcctacggcaaacctctcggaagcggttccagcttccagctacatctgctn 150 |||||||||| |||||||||||||||| ||| ||||||| |||| ||||||||| | Sbjct: 1079 aactctacagtctacggcaaacctctcagaacaggttccaagatccaactacatctggtt 1020 Query: 151 ataacctatattt 163 ||||||||||||| Sbjct: 1019 ataacctatattt 1007
>gb|AY110224.1| Zea mays CL5837_1 mRNA sequence Length = 944 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 300 tcctcgccggnaacttcagcaaagcanacaggacataccttg 341 |||||||| | ||||||||||||||| ||||| ||||||||| Sbjct: 688 tcctcgccaggaacttcagcaaagcaaacagggcataccttg 647
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 tcaaactctacagcctacggc 108 ||||||||||||||||||||| Sbjct: 2486452 tcaaactctacagcctacggc 2486472 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,630,683 Number of Sequences: 3902068 Number of extensions: 1630683 Number of successful extensions: 26821 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 26779 Number of HSP's gapped (non-prelim): 42 length of query: 356 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 334 effective length of database: 17,147,199,772 effective search space: 5727164723848 effective search space used: 5727164723848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)