ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags20p10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0082F22, complete sequence Length = 176038 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 552 tgccaaggttcgcttgttgccgaatagggagctcaccttggagtacctctgcctcagcgg 611 ||||| ||| ||||||||| ||| |||||||||| | |||||||| ||||||||||||| Sbjct: 141070 tgccatggtccgcttgttgttgaacagggagctcatcctggagtacttctgcctcagcgg 141011 Query: 612 tgtcggggt 620 ||||||||| Sbjct: 141010 tgtcggggt 141002
>gb|AC093955.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1240_E09, complete sequence Length = 118742 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 552 tgccaaggttcgcttgttgccgaatagggagctcaccttggagtacctctgcctcagcgg 611 ||||| ||| ||||||||| ||| |||||||||| | |||||||| ||||||||||||| Sbjct: 12292 tgccatggtccgcttgttgttgaacagggagctcatcctggagtacttctgcctcagcgg 12233 Query: 612 tgtcggggt 620 ||||||||| Sbjct: 12232 tgtcggggt 12224
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 552 tgccaaggttcgcttgttgccgaatagggagctcaccttggagtacctctgcctcagcgg 611 ||||| ||| ||||||||| ||| |||||||||| | |||||||| ||||||||||||| Sbjct: 13178293 tgccatggtccgcttgttgttgaacagggagctcatcctggagtacttctgcctcagcgg 13178234 Query: 612 tgtcggggt 620 ||||||||| Sbjct: 13178233 tgtcggggt 13178225
>dbj|AK060760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-H12, full insert sequence Length = 1447 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 552 tgccaaggttcgcttgttgccgaatagggagctcaccttggagtacctctgcctcagcgg 611 ||||| ||| ||||||||| ||| |||||||||| | |||||||| ||||||||||||| Sbjct: 891 tgccatggtccgcttgttgttgaacagggagctcatcctggagtacttctgcctcagcgg 832 Query: 612 tgtcggggt 620 ||||||||| Sbjct: 831 tgtcggggt 823
>emb|BX572638.13| Mouse DNA sequence from clone RP23-240N23 on chromosome 4, complete sequence Length = 47459 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 ataaaatgaaaagaataacagca 31 ||||||||||||||||||||||| Sbjct: 214 ataaaatgaaaagaataacagca 236
>emb|AL772296.6| Mouse DNA sequence from clone RP23-66O9 on chromosome 4, complete sequence Length = 191662 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 ataaaatgaaaagaataacagca 31 ||||||||||||||||||||||| Sbjct: 189876 ataaaatgaaaagaataacagca 189898
>gb|AC104395.4| Homo sapiens BAC clone RP11-488M9 from 2, complete sequence Length = 114032 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 aaataaaatgaaaagaataac 27 ||||||||||||||||||||| Sbjct: 78693 aaataaaatgaaaagaataac 78713
>emb|AL954857.10| Zebrafish DNA sequence from clone DKEY-216D12 in linkage group 23, complete sequence Length = 65564 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ctgaaataaaatgaaaagaat 24 ||||||||||||||||||||| Sbjct: 64049 ctgaaataaaatgaaaagaat 64069
>emb|AL929188.6| Zebrafish DNA sequence from clone CH211-273O6 in linkage group 23, complete sequence Length = 150865 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ctgaaataaaatgaaaagaat 24 ||||||||||||||||||||| Sbjct: 485 ctgaaataaaatgaaaagaat 505
>gb|AC166163.3| Mus musculus BAC clone RP23-444G9 from chromosome 17, complete sequence Length = 171447 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 taactttaggaactttataa 140 |||||||||||||||||||| Sbjct: 91271 taactttaggaactttataa 91290
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tcatgatttgcacatatggt 117 |||||||||||||||||||| Sbjct: 1682034 tcatgatttgcacatatggt 1682053
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tcatgatttgcacatatggt 117 |||||||||||||||||||| Sbjct: 1647032 tcatgatttgcacatatggt 1647051
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tcatgatttgcacatatggt 117 |||||||||||||||||||| Sbjct: 1646977 tcatgatttgcacatatggt 1646996
>ref|XM_751294.1| Ustilago maydis 521 hypothetical protein (UM00240.1) partial mRNA Length = 3099 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 cgacgacgaagaccatgacg 487 |||||||||||||||||||| Sbjct: 852 cgacgacgaagaccatgacg 871
>emb|CR407585.14| Zebrafish DNA sequence from clone CH211-141O18 in linkage group 6, complete sequence Length = 164483 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 67511 aaataaaatgaaaagaataa 67492
>gb|AC139296.4| Mus musculus BAC clone RP24-131C5 from chromosome 18, complete sequence Length = 165703 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 taatttttgtagacatattt 216 |||||||||||||||||||| Sbjct: 12365 taatttttgtagacatattt 12346
>gb|AC125538.4| Mus musculus BAC clone RP24-178B2 from chromosome 15, complete sequence Length = 169576 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ttctgaaataaaatgaaaagaata 25 |||||||| ||||||||||||||| Sbjct: 165745 ttctgaaagaaaatgaaaagaata 165768
>gb|AE014311.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 8 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 tgaaataaaatgaaaagaataaca 28 ||||||||||||||||||| |||| Sbjct: 171924 tgaaataaaatgaaaagaaaaaca 171947
>gb|AC122051.2| Mus musculus BAC clone RP24-459B17 from 18, complete sequence Length = 177747 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 taatttttgtagacatattt 216 |||||||||||||||||||| Sbjct: 165082 taatttttgtagacatattt 165063
>gb|AY318832.1| Gorilla gorilla AluYe5AH8 preintegration site Length = 501 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 cagctgccgacctcatcttc 540 |||||||||||||||||||| Sbjct: 53 cagctgccgacctcatcttc 72
>gb|AY318829.1| Homo sapiens AluYe5AH8 preintegration site Length = 812 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 cagctgccgacctcatcttc 540 |||||||||||||||||||| Sbjct: 53 cagctgccgacctcatcttc 72
>gb|AC003080.1| Homo sapiens BAC clone GS1-368F15 from 7, complete sequence Length = 179531 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ttagttatctcagccttatc 234 |||||||||||||||||||| Sbjct: 61448 ttagttatctcagccttatc 61467
>gb|AC162304.4| Mus musculus chromosome 7, clone RP23-350J16, complete sequence Length = 219899 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ataaaatgaaaagaataaca 28 |||||||||||||||||||| Sbjct: 80782 ataaaatgaaaagaataaca 80763
>emb|AL591847.8| Human DNA sequence from clone RP11-510L10 on chromosome 13, complete sequence Length = 171596 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 tgaaataaaatgaaaagaataaca 28 ||||||||||||||||||| |||| Sbjct: 52570 tgaaataaaatgaaaagaaaaaca 52593
>emb|AL357498.16| Human DNA sequence from clone RP11-342H9 on chromosome 6, complete sequence Length = 101064 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 tgaaataaaatgaaaagaataaca 28 ||||||||||||||||||| |||| Sbjct: 39928 tgaaataaaatgaaaagaagaaca 39905
>gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence Length = 270695 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 ccttggagtacctctgcctc 606 |||||||||||||||||||| Sbjct: 30077 ccttggagtacctctgcctc 30096
>emb|AL158841.6| Human DNA sequence from clone RP11-183M13 on chromosome 1 Contains part of the PTGFR gene for prostaglandin F receptor (FP) and part of a novel gene, complete sequence Length = 167721 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 catttcatgtacttacacat 82 |||||||||||||||||||| Sbjct: 137035 catttcatgtacttacacat 137016
>emb|AL139812.11| Human DNA sequence from clone RP1-19N1 on chromosome Xq21.33-22.3 Contains the gene for a novel protein similar to chondroitin sulfate GalNAcT-2 (GALNACT-2), complete sequence Length = 144242 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ttgtagacatatttagttatctca 226 ||||| |||||||||||||||||| Sbjct: 19890 ttgtaaacatatttagttatctca 19867
>emb|AL008710.1|HS292H14 Human DNA sequence from clone RP1-292H14 on chromosome Xp21, complete sequence Length = 97129 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 72762 aaataaaatgaaaagaataa 72743
>ref|XM_792866.1| PREDICTED: Strongylocentrotus purpuratus similar to zn-finger, CCHC type and RNA-directed DNA polymerase and Integrase, catalytic domain containing protein family member (1E419) (LOC593390), mRNA Length = 2313 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 catctgtcatttcatgtact 75 |||||||||||||||||||| Sbjct: 67 catctgtcatttcatgtact 48
>emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 in linkage group 8, complete sequence Length = 175706 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 146756 aaataaaatgaaaagaataa 146775
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 cgaccgctgccccgaggttg 316 |||||||||||||||||||| Sbjct: 820964 cgaccgctgccccgaggttg 820945
>emb|AL034560.3|PFMAL3P8 Plasmodium falciparum MAL3P8, complete sequence Length = 108908 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 cgacgacgaagaccatgacgccga 491 ||||||||||||| |||||||||| Sbjct: 35932 cgacgacgaagacgatgacgccga 35955
>gb|AC091969.3| Homo sapiens chromosome 5 clone RP11-501F22, complete sequence Length = 177647 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gaaataaaatgaaaagaata 25 |||||||||||||||||||| Sbjct: 155955 gaaataaaatgaaaagaata 155936
>gb|AC009711.10| Homo sapiens chromosome 15, clone RP11-356B18, complete sequence Length = 205925 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 cagctgccgacctcatcttc 540 |||||||||||||||||||| Sbjct: 89600 cagctgccgacctcatcttc 89581
>emb|BX470133.27| Zebrafish DNA sequence from clone DKEY-169N7 in linkage group 9, complete sequence Length = 178929 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 51025 aaataaaatgaaaagaataa 51006
>gb|AC117384.5| Homo sapiens 3 BAC RP11-114I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164598 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tcaaatttaaactgcaccat 256 |||||||||||||||||||| Sbjct: 161554 tcaaatttaaactgcaccat 161535
>gb|AC068776.17| Homo sapiens 3 BAC RP11-280F2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162446 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ctctcagttacacttacctg 181 |||||||||||||||||||| Sbjct: 69916 ctctcagttacacttacctg 69897
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 425 gttcgtctttgtctagatggactgcttc 452 |||||||| ||||||| ||||||||||| Sbjct: 1679708 gttcgtctctgtctaggtggactgcttc 1679681
>gb|AF498399.1| Bombus patagiatus cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 450 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 127 aaataaaatgaaaagaataa 108
>gb|AF498397.1| Bombus hypocrita cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 450 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 127 aaataaaatgaaaagaataa 108
>gb|AF002724.1| Lestrimelitta limao cytochrome b (cytb) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 520 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 290 aaataaaatgaaaagaataa 271
>gb|AF002722.1| Bombus lucorum cytochrome b (cytb) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 520 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 290 aaataaaatgaaaagaataa 271
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cattgcattagtaatttttg 205 |||||||||||||||||||| Sbjct: 98273 cattgcattagtaatttttg 98254
>gb|AC008794.8| Homo sapiens chromosome 19 clone CTD-2050I18, complete sequence Length = 131972 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 gaaataaaatgaaaagaata 25 |||||||||||||||||||| Sbjct: 45924 gaaataaaatgaaaagaata 45943
>emb|BX323042.7| Zebrafish DNA sequence from clone DKEYP-78G2 in linkage group 6, complete sequence Length = 206473 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 167909 aaataaaatgaaaagaataa 167890
>dbj|AK032478.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430559N13 product:unclassifiable, full insert sequence Length = 2776 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ataaaatgaaaagaataaca 28 |||||||||||||||||||| Sbjct: 5 ataaaatgaaaagaataaca 24
>gb|AC010900.12| Homo sapiens BAC clone RP11-544H14 from 2, complete sequence Length = 208024 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tgaaataaaatgaaaagaat 24 |||||||||||||||||||| Sbjct: 204649 tgaaataaaatgaaaagaat 204630
>gb|AC068137.8| Homo sapiens BAC clone RP11-803A13 from 2, complete sequence Length = 166719 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gaaataaaatgaaaagaata 25 |||||||||||||||||||| Sbjct: 120336 gaaataaaatgaaaagaata 120317
>gb|AC019164.9| Homo sapiens BAC clone RP11-146J19 from 2, complete sequence Length = 117543 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 97235 aaataaaatgaaaagaataa 97216
>gb|AC093412.3| Homo sapiens chromosome 3 clone RP11-11L6, complete sequence Length = 178447 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 taactcatctgatcagacta 277 |||||||||||||||||||| Sbjct: 108113 taactcatctgatcagacta 108132
>emb|AL928556.7| Zebrafish DNA sequence from clone DKEY-63M7, complete sequence Length = 196404 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 142905 aaataaaatgaaaagaataa 142886
>emb|Z98746.1|HS334P19 Human DNA sequence from clone RP3-334P19 on chromosome Xq22, complete sequence Length = 30281 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ttgtagacatatttagttatctca 226 ||||| |||||||||||||||||| Sbjct: 27545 ttgtaaacatatttagttatctca 27522
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tcatgatttgcacatatggt 117 |||||||||||||||||||| Sbjct: 1650457 tcatgatttgcacatatggt 1650476
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tcatgatttgcacatatggt 117 |||||||||||||||||||| Sbjct: 1646909 tcatgatttgcacatatggt 1646928
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tcatgatttgcacatatggt 117 |||||||||||||||||||| Sbjct: 1770241 tcatgatttgcacatatggt 1770260
>gb|AC135113.4| Mus musculus BAC clone RP24-63N7 from 15, complete sequence Length = 173656 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ttctgaaataaaatgaaaagaata 25 |||||||| ||||||||||||||| Sbjct: 150454 ttctgaaagaaaatgaaaagaata 150431
>dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT42D17, TM0108, complete sequence Length = 117124 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 tctgaaataaaatgaaaagaataa 26 ||||||||||||||||| |||||| Sbjct: 96242 tctgaaataaaatgaaatgaataa 96265
>emb|AJ235249.1|CSI235249 Ceratosolen silvestrianus mitochondrial cytb gene, strain CSSULT11, partial Length = 681 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 421 aaataaaatgaaaagaataa 402
>emb|AJ235247.1|CME235247 Ceratosolen megacephalus mitochondrial cytb gene, strain CMVCTZ19, partial Length = 699 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 421 aaataaaatgaaaagaataa 402
>emb|AJ235235.1|CCA235235 Ceratosolen capensis mitochondrial cytb gene, strain CCSUTZ18, partial Length = 699 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 421 aaataaaatgaaaagaataa 402
>dbj|D31785.1|HASMT Pichia canadensis mitochondrial DNA, complete sequence Length = 27694 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aaataaaatgaaaagaataa 26 |||||||||||||||||||| Sbjct: 22785 aaataaaatgaaaagaataa 22804 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,493,169 Number of Sequences: 3902068 Number of extensions: 6493169 Number of successful extensions: 120351 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119904 Number of HSP's gapped (non-prelim): 447 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
