>gb|BT018960.1| Zea mays clone Contig259.F mRNA sequence
          Length = 599

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 295 ttggcgtagtgctcgaacagtcctccatcgatggcgatgactgaccg 341
           |||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 86  ttggtgtagtgctcgaacagtcctccgtcgatggcgatgactgaccg 40

>ref|NM_189656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1800

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 289  ctgaacttggcgtagtgctcgaacagtcctccatcgatggcgatgac 335
            ||||| |||| |||||| |||||||  |||||||| |||||||||||
Sbjct: 1673 ctgaatttggtgtagtgttcgaacaaacctccatcaatggcgatgac 1627

>gb|DQ116390.1| Oryza sativa (japonica cultivar-group) hexokinase 8 (HXK8) mRNA,
            complete cds
          Length = 1835

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 289  ctgaacttggcgtagtgctcgaacagtcctccatcgatggcgatgac 335
            ||||| |||| |||||| |||||||  |||||||| |||||||||||
Sbjct: 1514 ctgaatttggtgtagtgttcgaacaaacctccatcaatggcgatgac 1468

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                              
Query: 289     ctgaacttggcgtagtgctcgaacagtcctccatcgatggcgatgac 335
               ||||| |||| |||||| |||||||  |||||||| |||||||||||
Sbjct: 4819492 ctgaatttggtgtagtgttcgaacaaacctccatcaatggcgatgac 4819538

>gb|AY884167.1| Oryza sativa (japonica cultivar-group) hexokinase 4 (HXK4) mRNA,
            complete cds
          Length = 1622

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 289  ctgaacttggcgtagtgctcgaacagtcctccatcgatggcgatgac 335
            ||||| |||| |||||| |||||||  |||||||| |||||||||||
Sbjct: 1339 ctgaatttggtgtagtgttcgaacaaacctccatcaatggcgatgac 1293

>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0710E05
          Length = 179714

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 289   ctgaacttggcgtagtgctcgaacagtcctccatcgatggcgatgac 335
             ||||| |||| |||||| |||||||  |||||||| |||||||||||
Sbjct: 64141 ctgaatttggtgtagtgttcgaacaaacctccatcaatggcgatgac 64187

>dbj|AK099119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038N14, full
            insert sequence
          Length = 1634

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 289  ctgaacttggcgtagtgctcgaacagtcctccatcgatggcgatgac 335
            ||||| |||| |||||| |||||||  |||||||| |||||||||||
Sbjct: 1320 ctgaatttggtgtagtgttcgaacaaacctccatcaatggcgatgac 1274

>dbj|AK064011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-G12, full
            insert sequence
          Length = 1868

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 289  ctgaacttggcgtagtgctcgaacagtcctccatcgatggcgatgac 335
            ||||| |||| |||||| |||||||  |||||||| |||||||||||
Sbjct: 1531 ctgaatttggtgtagtgttcgaacaaacctccatcaatggcgatgac 1485

>gb|AY818711.1| Neurospora crassa FRQ-interacting RNA helicase (frh) mRNA, complete
            cds
          Length = 3321

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   cccccgagtacatgctggaga 77
            |||||||||||||||||||||
Sbjct: 1901 cccccgagtacatgctggaga 1921

>ref|XM_322620.1| Neurospora crassa OR74A hypothetical protein (NCU03363.1) partial
            mRNA
          Length = 3321

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   cccccgagtacatgctggaga 77
            |||||||||||||||||||||
Sbjct: 1901 cccccgagtacatgctggaga 1921

>ref|XM_951205.1| Neurospora crassa OR74A hypothetical protein (NCU03363.1) partial
            mRNA
          Length = 3321

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   cccccgagtacatgctggaga 77
            |||||||||||||||||||||
Sbjct: 1901 cccccgagtacatgctggaga 1921

>emb|BX284747.1|NCB9B11 Neurospora crassa DNA linkage group II BAC clone B9B11
          Length = 103284

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   cccccgagtacatgctggaga 77
            |||||||||||||||||||||
Sbjct: 9851 cccccgagtacatgctggaga 9871

>emb|CR556696.19| Zebrafish DNA sequence from clone CH211-80J13 in linkage group 20,
             complete sequence
          Length = 130645

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   tgcctactgttattcaacatt 158
             |||||||||||||||||||||
Sbjct: 85458 tgcctactgttattcaacatt 85478

>ref|NM_187061.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1497

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 291  gaacttggcgtagtgctcgaacag 314
            ||||||| ||||||||||||||||
Sbjct: 1362 gaacttgccgtagtgctcgaacag 1339

>emb|AL358612.9| Human DNA sequence from clone RP11-435M3 on chromosome 10 Contains the 5'
              end of the MYO3A gene for myosin IIIA, a novel gene and a
              CpG island, complete sequence
          Length = 174021

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    tgcctactgttattcaacat 157
              ||||||||||||||||||||
Sbjct: 146112 tgcctactgttattcaacat 146093

>gb|DQ116383.1| Oryza sativa (japonica cultivar-group) hexokinase 1 (HXK1) mRNA,
            complete cds
          Length = 1626

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 291  gaacttggcgtagtgctcgaacag 314
            ||||||| ||||||||||||||||
Sbjct: 1397 gaacttgccgtagtgctcgaacag 1374

>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence
          Length = 111912

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  catttgctgaacttggcgta 302
            ||||||||||||||||||||
Sbjct: 8196 catttgctgaacttggcgta 8177

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 291      gaacttggcgtagtgctcgaacag 314
                ||||||| ||||||||||||||||
Sbjct: 15240997 gaacttgccgtagtgctcgaacag 15240974

>gb|AY884164.1| Oryza sativa (japonica cultivar-group) hexokinase 1 (HXK1) mRNA,
            complete cds
          Length = 1584

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 291  gaacttggcgtagtgctcgaacag 314
            ||||||| ||||||||||||||||
Sbjct: 1421 gaacttgccgtagtgctcgaacag 1398

>gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, complete sequence
          Length = 159371

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 115   cacaaaatgtattgcaactagcttgcct 142
             ||||||||||||||||| || |||||||
Sbjct: 99470 cacaaaatgtattgcaattatcttgcct 99497

>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0475E07
          Length = 139961

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 291   gaacttggcgtagtgctcgaacag 314
             ||||||| ||||||||||||||||
Sbjct: 27010 gaacttgccgtagtgctcgaacag 26987

>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0030H06
          Length = 147890

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 291    gaacttggcgtagtgctcgaacag 314
              ||||||| ||||||||||||||||
Sbjct: 107746 gaacttgccgtagtgctcgaacag 107723

>dbj|AP002982.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1683C8
          Length = 176644

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   gtggtttccaagcatttgct 290
             ||||||||||||||||||||
Sbjct: 49585 gtggtttccaagcatttgct 49566


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,875,410
Number of Sequences: 3902068
Number of extensions: 1875410
Number of successful extensions: 34632
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34587
Number of HSP's gapped (non-prelim): 45
length of query: 354
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 332
effective length of database: 17,147,199,772
effective search space: 5692870324304
effective search space used: 5692870324304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)