>TATR_NPVBM (P33245) Trans-activating transcriptional regulatory protein|
           (Immediate early protein 1) (IE-1)
          Length = 587

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +2

Query: 65  RRDVLPYNYKSNCNLLVHNIRYNSNTDSEQKSRDLLQRTKLQNSRVNPLEK 217
           ++  L Y Y S  NLL +N +Y+ N  S   + + L++ K ++  ++ +E+
Sbjct: 425 KKSTLTYKYSSVANLLFNNYKYHDNIASNNNAEN-LKKVKKEDGSMHIVEQ 474

>TATR_NPVAC (P11138) Trans-activating transcriptional regulatory protein|
           (Immediate early protein 1) (IE-1)
          Length = 582

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +2

Query: 65  RRDVLPYNYKSNCNLLVHNIRYNSNTDSEQKSRDLLQRTKLQNSRVNPLEK 217
           ++  L Y Y S  NLL +N +Y+ N  S   + + L++ K ++  ++ +E+
Sbjct: 420 KKSTLTYKYSSVANLLFNNYKYHDNIASNNNAEN-LKKVKKEDGSMHIVEQ 469

>KRA13_HUMAN (Q8IUG1) Keratin-associated protein 1-3 (Keratin-associated protein|
           1.8) (Keratin-associated protein 1.9)
          Length = 177

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 22/70 (31%), Positives = 28/70 (40%)
 Frame = -2

Query: 419 GYPGAKCKEARCXESF*WQPSRLVQMQVYPSRCQHTLDGNISLQFFFFMCSDVSXTC*QF 240
           G  G+ C +  C E+   QPS        PS CQ +  G  S    F      S +C Q 
Sbjct: 18  GTCGSSCCQPSCCETSCCQPSCCETSCCQPSCCQTSFCGFPS----FSTSGTCSSSCCQP 73

Query: 239 ACCPTLFTSP 210
           +CC T    P
Sbjct: 74  SCCETSCCQP 83

>CPR3_ARATH (Q9SUT0) Probable cysteine proteinase At4g11310 precursor (EC|
           3.4.22.-)
          Length = 364

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 250 HVKLTSEHMKKKNCSEILPSSVCWHREG 333
           HV +TS    K +  ++LP SV W  EG
Sbjct: 120 HVFMTSSDRYKTSADDVLPKSVDWRNEG 147

>NU5M_ASCSU (P24884) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 547

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = -1

Query: 303 QYFTAVFFFHVFRCQFXMLTVCMLSYSIYFSNGFTLEFWSFVLCSKS 163
           ++F + FF  VF C F         YS     GF + F   V C  S
Sbjct: 351 EFFFSNFFMVVFACMFFFSVFLTFGYSYRLWKGFFMSFSRPVFCFSS 397


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,041,190
Number of Sequences: 219361
Number of extensions: 1556599
Number of successful extensions: 3751
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3751
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)