| Clone Name | rbags21e06 |
|---|---|
| Clone Library Name | barley_pub |
>UBX2_SCHPO (O14048) UBX domain-containing protein 2| Length = 427 Score = 36.2 bits (82), Expect = 0.037 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = -1 Query: 437 RVAVRLPGGRRIQRNFLHTDPIKLLWSLCSSEVEDGEKRAFHFGQPIPGAAINKLQYESE 258 R+ +R+P G R R F TDP+ +++ E +K+ F L + Sbjct: 355 RIQIRMPNGARFIRRFSLTDPVSKVYAYVKGVAEGADKQPFSL-----TFQRKSLWTSLD 409 Query: 257 QTFKEAGLANSMI 219 T KEAG+ N+ + Sbjct: 410 STIKEAGIQNTAL 422
>PTK7_HUMAN (Q13308) Tyrosine-protein kinase-like 7 precursor (Colon carcinoma| kinase 4) (CCK-4) Length = 1070 Score = 34.3 bits (77), Expect = 0.14 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 8/70 (11%) Frame = -1 Query: 377 PIKLLWSLCSSEVEDGEKRAFHFGQPIPGAAINKLQ--------YESEQTFKEAGLANSM 222 P+ + W L + V+D E+R F G + AA++ LQ + T +EA AN+ Sbjct: 60 PVHVYWLLDGAPVQDTERR-FAQGSSLSFAAVDPLQDSGTFQCVARDDVTGEEARSANAS 118 Query: 221 INLLWD*AGP 192 N+ W AGP Sbjct: 119 FNIKWIEAGP 128
>CAPS_CAEEL (Q23658) Calcium-dependent secretion activator (Uncoordinated| protein 31) Length = 1260 Score = 30.4 bits (67), Expect = 2.0 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 214 RLIIELASPASLKVCSLSYCSLLMAAPGMGWPKWKARF 327 R+ I + P +LK C YC A W KWK RF Sbjct: 478 RIAIRVEKPPNLKYCGYCYCIGRNA-----WKKWKKRF 510
>TA2R9_PANTR (Q646C6) Taste receptor type 2 member 9 (T2R9)| Length = 312 Score = 29.3 bits (64), Expect = 4.5 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = -1 Query: 227 SMINLLWD*AGPSHLWWASCIACCFFARI 141 S++N++W A S LW+ SC++ + +I Sbjct: 83 SIVNVVWTFANNSSLWFTSCLSIFYLLKI 111
>TA2R9_HUMAN (Q9NYW1) Taste receptor type 2 member 9 (T2R9) (Taste receptor| family B member 6) (TRB6) Length = 312 Score = 29.3 bits (64), Expect = 4.5 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = -1 Query: 227 SMINLLWD*AGPSHLWWASCIACCFFARI 141 S++N++W A S LW+ SC++ + +I Sbjct: 83 SIVNVVWTFANNSSLWFTSCLSIFYLLKI 111
>OXA1L_HUMAN (Q15070) Inner membrane protein OXA1L, mitochondrial precursor| (Oxidase assembly 1-like protein) (OXA1-like protein) (OXA1Hs) (Hsa) Length = 435 Score = 28.9 bits (63), Expect = 5.9 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Frame = -1 Query: 293 GAAINKLQYESEQTFKEAGLAN-SMINLLWD*AGPSHL-----WWASCIACCFFAR--IY 138 G + +Q +EQ+F E GL + + + L+ + H+ WW + AC FAR I+ Sbjct: 97 GETADVVQTAAEQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIF 156 Query: 137 *LIV 126 LIV Sbjct: 157 PLIV 160
>STAG3_HUMAN (Q9UJ98) Cohesin subunit SA-3 (Stromal antigen 3) (Stromalin 3) (SCC3| homolog 3) Length = 1225 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Frame = -1 Query: 365 LWSLCSSEVEDGEKRAFHFGQPIPGAAINKL----QYESEQTFKEAGLANSMINL 213 LW L E EDG + F GQP+ G ++ +++ GL N ++ L Sbjct: 1119 LWGLKEMEEEDGSELDFAQGQPVAGTERSRFLGPQYFQTPHNPSGPGLGNQLMRL 1173
>NPB_BOVIN (Q8MJV4) Neuropeptide B precursor (Preproprotein L7) (bPPL7)| [Contains: Neuropeptide B-29 (NPB29) (L7C)] Length = 122 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +1 Query: 229 LASPASLKVCSLSYCSLLMAAPGMGWPK 312 +A PA L +L+ C LL+A+PG+ W K Sbjct: 1 MAGPAMLVAAALALC-LLLASPGLAWYK 27
>TA2R9_PONPY (Q645V9) Taste receptor type 2 member 9 (T2R9)| Length = 312 Score = 28.5 bits (62), Expect = 7.7 Identities = 9/29 (31%), Positives = 19/29 (65%) Frame = -1 Query: 227 SMINLLWD*AGPSHLWWASCIACCFFARI 141 S+++++W A S LW+ SC++ + +I Sbjct: 83 SIVBIVWTFANNSSLWFTSCLSIFYLLKI 111
>INCC1_ECOLI (Q52312) Protein incC| Length = 358 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +3 Query: 180 PKMRWAGLVPQEVDHR----VXXXXXXXXXXXXXXXXXXXRARDGLAEVEGPLLPVLHLR 347 PK+R+ G+VP +VD R V ARD +AE G +PV ++ Sbjct: 273 PKLRFLGMVPNKVDARKPRHVNNLATLQQAYPQLILPFSIGARDSIAEALGEQMPVWKIK 332
>SLU7_MAGGR (Q51LA6) Pre-mRNA-splicing factor SLU7| Length = 474 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Frame = +1 Query: 301 GWPKWKARFSPSSTSEE--HNDHSSLMGSVWRKFLW 402 G PK AR S E+ HN+H+S+ GS W F W Sbjct: 333 GGPKGVAR---SKYKEDIFHNNHTSVWGSWWSDFKW 365 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,149,237 Number of Sequences: 219361 Number of extensions: 1268961 Number of successful extensions: 4120 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4001 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4119 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)