ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465156.2| Oryza sativa (japonica cultivar-group), mRNA 58 4e-05
2ref|XM_507470.1| PREDICTED Oryza sativa (japonica cultivar-group... 58 4e-05
3ref|XM_465155.1| Oryza sativa (japonica cultivar-group), mRNA 58 4e-05
4ref|XM_507469.1| PREDICTED Oryza sativa (japonica cultivar-group... 58 4e-05
5ref|XM_506781.2| PREDICTED Oryza sativa (japonica cultivar-group... 58 4e-05
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
7dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
8dbj|AK099254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
9dbj|AK072860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
10ref|XM_507600.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
11ref|XM_483517.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
12ref|XM_507599.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
13ref|XM_507307.2| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
14ref|XM_483511.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
16dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
17dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
18dbj|AK109343.2| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
19dbj|AK101015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
20dbj|AK066926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
21dbj|AK061777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
22gb|AC010659.5| Drosophila melanogaster 3L BAC RP98-13C22 (Roswel... 44 0.53
23gb|AY111394.1| Zea mays CL65062_1 mRNA sequence 44 0.53
24gb|AY106707.1| Zea mays PCO115444 mRNA sequence 44 0.53
25gb|AE003539.3| Drosophila melanogaster chromosome 3L, section 46... 44 0.53
26gb|AC130715.3| Mus musculus BAC clone RP23-460L16 from chromosom... 42 2.1
27emb|AL157397.14| Human DNA sequence from clone RP11-438P12 on ch... 42 2.1
28emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in... 42 2.1
29emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chr... 42 2.1
30gb|AC145557.3| Mus musculus BAC clone RP23-313I19 from chromosom... 40 8.3
31gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complet... 40 8.3
32gb|AC125114.3| Mus musculus BAC clone RP24-254M13 from chromosom... 40 8.3
33gb|AC126026.4| Mus musculus BAC clone RP24-486A17 from chromosom... 40 8.3
34gb|AC105407.5| Mus musculus BAC clone RP24-196J17 from 13, compl... 40 8.3
35emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on ch... 40 8.3
36emb|AL442643.2| Human DNA sequence from clone RP11-564H19 on chr... 40 8.3
37gb|AC182768.3| Pan troglodytes BAC clone CH251-178I17 from chrom... 40 8.3
38gb|AC114941.2| Homo sapiens chromosome 5 clone CTD-2287M17, comp... 40 8.3
39gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromoso... 40 8.3
40ref|XM_226546.3| PREDICTED: Rattus norvegicus similar to Galacto... 40 8.3
41gb|AF211184.1|AF211184 Hylobates sp. growth hormone receptor (GH... 40 8.3
42gb|AF210633.1|AF210633 Homo sapiens growth hormone receptor (GHR... 40 8.3
43gb|AF211185.1|AF211185 Pongo pygmaeus growth hormone receptor (G... 40 8.3
44gb|AF209082.1|AF209082 Pan troglodytes growth hormone receptor (... 40 8.3
45gb|AF155912.1|AF155912 Homo sapiens growth hormone receptor (GHR... 40 8.3
46dbj|BS000029.1| Pan troglodytes chromosome 22 clone:RP43-172K02,... 40 8.3
47emb|AL163213.2|HS21C013 Homo sapiens chromosome 21 segment HS21C013 40 8.3
48gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone ... 40 8.3
49tpe|BN000741.1| TPA: TPA_inf: Rattus norvegicus mRNA for galacto... 40 8.3
50emb|Z68756.1|HSL191F1 Human DNA sequence from clone LA04NC01-191... 40 8.3
51gb|AC092145.2| Homo sapiens chromosome 16 clone RP11-61F12, comp... 40 8.3
52dbj|AP000473.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 8.3 
>ref|XM_465156.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1556

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 85   atacagtcaactataagggactatatctcgcaccaatattaacacccac 133
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1463 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1416



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1053 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1007
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>ref|XM_507470.1| PREDICTED Oryza sativa (japonica cultivar-group), P0543C11.17-3 mRNA
          Length = 1696

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 85   atacagtcaactataagggactatatctcgcaccaatattaacacccac 133
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1506 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1459



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1096 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1050
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>ref|XM_465155.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1603

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 85   atacagtcaactataagggactatatctcgcaccaatattaacacccac 133
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1510 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1463



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1100 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1054
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>ref|XM_507469.1| PREDICTED Oryza sativa (japonica cultivar-group), P0543C11.17-3 mRNA
          Length = 1611

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 85   atacagtcaactataagggactatatctcgcaccaatattaacacccac 133
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1513 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1466



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1103 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1057
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>ref|XM_506781.2| PREDICTED Oryza sativa (japonica cultivar-group), P0543C11.17-3 mRNA
          Length = 1637

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 85   atacagtcaactataagggactatatctcgcaccaatattaacacccac 133
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1544 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1497



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1134 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1088
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                                 
Query: 85       atacagtcaactataagggactatatctcgcaccaatattaacacccac 133
                ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 11966873 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 11966826



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 564      ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
                |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 11966463 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 11966417
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>dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0543C11
          Length = 159075

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                              
Query: 85    atacagtcaactataagggactatatctcgcaccaatattaacacccac 133
             ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 64151 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 64104



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 564   ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
             |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 63741 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 63695
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>dbj|AK099254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163I06, full
            insert sequence
          Length = 1696

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 85   atacagtcaactataagggactatatctcgcaccaatattaacacccac 133
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1506 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1459



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1096 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1050
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>dbj|AK072860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143I03, full
            insert sequence
          Length = 1636

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 85   atacagtcaactataagggactatatctcgcaccaatattaacacccac 133
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1543 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1496



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1133 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1087
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>ref|XM_507600.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.23 mRNA
          Length = 1696

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 106  tatatctcgcaccaatattaacacccac 133
            ||||||||||||||||||||||||||||
Sbjct: 1486 tatatctcgcaccaatattaacacccac 1459



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1096 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1050
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>ref|XM_483517.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1603

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 106  tatatctcgcaccaatattaacacccac 133
            ||||||||||||||||||||||||||||
Sbjct: 1490 tatatctcgcaccaatattaacacccac 1463



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1100 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1054
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>ref|XM_507599.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.23 mRNA
          Length = 1642

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 106  tatatctcgcaccaatattaacacccac 133
            ||||||||||||||||||||||||||||
Sbjct: 1528 tatatctcgcaccaatattaacacccac 1501



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1138 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1092
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>ref|XM_507307.2| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.23 mRNA
          Length = 1645

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 106  tatatctcgcaccaatattaacacccac 133
            ||||||||||||||||||||||||||||
Sbjct: 1532 tatatctcgcaccaatattaacacccac 1505



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1142 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1096
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>ref|XM_483511.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1679

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 106  tatatctcgcaccaatattaacacccac 133
            ||||||||||||||||||||||||||||
Sbjct: 1566 tatatctcgcaccaatattaacacccac 1539



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1176 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1130
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 106      tatatctcgcaccaatattaacacccac 133
                ||||||||||||||||||||||||||||
Sbjct: 26686748 tatatctcgcaccaatattaacacccac 26686721



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 106      tatatctcgcaccaatattaacacccac 133
                ||||||||||||||||||||||||||||
Sbjct: 26648429 tatatctcgcaccaatattaacacccac 26648402



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 564      ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
                |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 26686358 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 26686312



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 564      ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
                |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 26648039 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 26647993
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>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702C09
          Length = 138203

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 106   tatatctcgcaccaatattaacacccac 133
             ||||||||||||||||||||||||||||
Sbjct: 98275 tatatctcgcaccaatattaacacccac 98248



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 106   tatatctcgcaccaatattaacacccac 133
             ||||||||||||||||||||||||||||
Sbjct: 59956 tatatctcgcaccaatattaacacccac 59929



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 564   ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
             |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 97885 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 97839



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 564   ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
             |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 59566 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 59520
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>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0033D24
          Length = 186132

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 106   tatatctcgcaccaatattaacacccac 133
             ||||||||||||||||||||||||||||
Sbjct: 30090 tatatctcgcaccaatattaacacccac 30063



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 564   ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
             |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 29700 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 29654
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>dbj|AK109343.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G11, full
            insert sequence
          Length = 1603

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 106  tatatctcgcaccaatattaacacccac 133
            ||||||||||||||||||||||||||||
Sbjct: 1490 tatatctcgcaccaatattaacacccac 1463



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1100 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1054
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>dbj|AK101015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149C09, full
            insert sequence
          Length = 1679

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 106  tatatctcgcaccaatattaacacccac 133
            ||||||||||||||||||||||||||||
Sbjct: 1566 tatatctcgcaccaatattaacacccac 1539



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1176 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1130
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>dbj|AK066926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091O05, full
            insert sequence
          Length = 1942

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 106  tatatctcgcaccaatattaacacccac 133
            ||||||||||||||||||||||||||||
Sbjct: 1829 tatatctcgcaccaatattaacacccac 1802



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1439 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1393
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>dbj|AK061777.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D08, full
            insert sequence
          Length = 1603

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 106  tatatctcgcaccaatattaacacccac 133
            ||||||||||||||||||||||||||||
Sbjct: 1490 tatatctcgcaccaatattaacacccac 1463



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 564  ttctcatataatgcttgtagctccaatgacaggttgcgcgcagcctc 610
            |||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct: 1100 ttctcatagaatgcttgtagctccaaagccagcttgcgagcagcctc 1054
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>gb|AC010659.5| Drosophila melanogaster 3L BAC RP98-13C22 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 162345

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 39    gaccaatcaatgccaaactgat 60
             ||||||||||||||||||||||
Sbjct: 41248 gaccaatcaatgccaaactgat 41269
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>gb|AY111394.1| Zea mays CL65062_1 mRNA sequence
          Length = 579

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 552 gaggcttgagtcttctcatataatgcttgtagctccaatgacaggttgcg 601
           ||||| |||| ||||||||||||| | ||||| |||| || |||||||||
Sbjct: 528 gaggcctgagacttctcatataatacctgtagttccagtgccaggttgcg 577



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 447 aggattgcttgtgcgtttaatgcagaaagcttagataggcagaaagcctccca 499
           ||||| ||||| ||| |||| ||||||||||| ||  | ||||||||||||||
Sbjct: 423 aggatggcttgggcgcttaaggcagaaagcttggactgacagaaagcctccca 475
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>gb|AY106707.1| Zea mays PCO115444 mRNA sequence
          Length = 1423

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 53/62 (85%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                        
Query: 70   tggaaccaaaggattatacagtcaactataagggac-tatatctcgcaccaatattaaca 128
            |||||||||| |||| ||||  ||||||||| |||  |||||| | ||||||||||||||
Sbjct: 1288 tggaaccaaatgattgtacaaccaactataatggatatatatcccacaccaatattaaca 1229

              
Query: 129  cc 130
            ||
Sbjct: 1228 cc 1227
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>gb|AE003539.3| Drosophila melanogaster chromosome 3L, section 46 of 83 of the complete
              sequence
          Length = 272016

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 39     gaccaatcaatgccaaactgat 60
              ||||||||||||||||||||||
Sbjct: 252624 gaccaatcaatgccaaactgat 252645
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>gb|AC130715.3| Mus musculus BAC clone RP23-460L16 from chromosome 2, complete sequence
          Length = 168935

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 503   ttcggcttccagtgaaatagcagat 527
             |||| ||||||||||||||||||||
Sbjct: 69395 ttcgtcttccagtgaaatagcagat 69371
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>emb|AL157397.14| Human DNA sequence from clone RP11-438P12 on chromosome 10, complete
             sequence
          Length = 142281

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 335   aacaacaacagagatgccaccttct 359
             |||||||| ||||||||||||||||
Sbjct: 37919 aacaacaagagagatgccaccttct 37895
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>emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in linkage group 4,
              complete sequence
          Length = 171708

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 356    ttctttcagggcagcagggac 376
              |||||||||||||||||||||
Sbjct: 141931 ttctttcagggcagcagggac 141951
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>emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chromosome 2, complete
              sequence
          Length = 212028

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 503    ttcggcttccagtgaaatagcagat 527
              |||| ||||||||||||||||||||
Sbjct: 167790 ttcgtcttccagtgaaatagcagat 167766
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>gb|AC145557.3| Mus musculus BAC clone RP23-313I19 from chromosome 19, complete sequence
          Length = 226099

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    ggggacacccacagtgacac 444
              ||||||||||||||||||||
Sbjct: 160926 ggggacacccacagtgacac 160945
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>gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complete sequence
          Length = 240379

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   acccaccccaggcctcaagc 147
             ||||||||||||||||||||
Sbjct: 32368 acccaccccaggcctcaagc 32349
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>gb|AC125114.3| Mus musculus BAC clone RP24-254M13 from chromosome 18, complete sequence
          Length = 158836

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    cctgaagaactgcagccaaa 166
              ||||||||||||||||||||
Sbjct: 113101 cctgaagaactgcagccaaa 113082
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>gb|AC126026.4| Mus musculus BAC clone RP24-486A17 from chromosome 18, complete
             sequence
          Length = 138242

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   cctgaagaactgcagccaaa 166
             ||||||||||||||||||||
Sbjct: 48933 cctgaagaactgcagccaaa 48914
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>gb|AC105407.5| Mus musculus BAC clone RP24-196J17 from 13, complete sequence
          Length = 175889

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    tacagtcaactataagggac 105
             ||||||||||||||||||||
Sbjct: 38723 tacagtcaactataagggac 38742
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>emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on chromosome 4, complete
              sequence
          Length = 200379

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    gcagcaccttcttttgtagc 307
              ||||||||||||||||||||
Sbjct: 184081 gcagcaccttcttttgtagc 184062
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>emb|AL442643.2| Human DNA sequence from clone RP11-564H19 on chromosome 13, complete
              sequence
          Length = 167477

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    ttcttttgtagcaactggga 315
              ||||||||||||||||||||
Sbjct: 109075 ttcttttgtagcaactggga 109056
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>gb|AC182768.3| Pan troglodytes BAC clone CH251-178I17 from chromosome 7, complete
              sequence
          Length = 186886

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    acccaccccaggcctcaagc 147
              ||||||||||||||||||||
Sbjct: 121967 acccaccccaggcctcaagc 121986
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>gb|AC114941.2| Homo sapiens chromosome 5 clone CTD-2287M17, complete sequence
          Length = 159281

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 140    cctcaagcctgaagaactgcagcc 163
              ||||||||||||||| ||||||||
Sbjct: 141712 cctcaagcctgaagacctgcagcc 141689



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 140    cctcaagcctgaagaactgcagcc 163
              ||||||||||||||| ||||||||
Sbjct: 139033 cctcaagcctgaagacctgcagcc 139010
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>gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromosome 7, complete
           sequence
          Length = 217260

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 128 acccaccccaggcctcaagc 147
           ||||||||||||||||||||
Sbjct: 874 acccaccccaggcctcaagc 855
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>ref|XM_226546.3| PREDICTED: Rattus norvegicus similar to Galactosamine
           (N-acetyl)-6-sulfate sulfatase (LOC292073), mRNA
          Length = 2587

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 tgccaccttctttgggagca 422
           ||||||||||||||||||||
Sbjct: 984 tgccaccttctttgggagca 965
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>gb|AF211184.1|AF211184 Hylobates sp. growth hormone receptor (GHR) gene, partial cds
          Length = 2448

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 140 cctcaagcctgaagaactgcagcc 163
           ||||||||||||||| ||||||||
Sbjct: 884 cctcaagcctgaagacctgcagcc 861
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>gb|AF210633.1|AF210633 Homo sapiens growth hormone receptor (GHR) gene, GHR-d3 allele,
            partial sequence
          Length = 1474

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  cctcaagcctgaagaactgcagcc 163
            ||||||||||||||| ||||||||
Sbjct: 1021 cctcaagcctgaagacctgcagcc 998
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>gb|AF211185.1|AF211185 Pongo pygmaeus growth hormone receptor (GHR) gene, partial cds
          Length = 2480

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 140 cctcaagcctgaagaactgcagcc 163
           ||||||||||||||| ||||||||
Sbjct: 919 cctcaagcctgaagacctgcagcc 896
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>gb|AF209082.1|AF209082 Pan troglodytes growth hormone receptor (GHR) gene, partial cds
          Length = 3876

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  cctcaagcctgaagaactgcagcc 163
            ||||||||||||||| ||||||||
Sbjct: 3500 cctcaagcctgaagacctgcagcc 3477



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 140 cctcaagcctgaagaactgcagcc 163
           ||||||||||||||| ||||||||
Sbjct: 823 cctcaagcctgaagacctgcagcc 800
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>gb|AF155912.1|AF155912 Homo sapiens growth hormone receptor (GHR) gene, exon 3 and partial
            cds
          Length = 6789

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  cctcaagcctgaagaactgcagcc 163
            ||||||||||||||| ||||||||
Sbjct: 6159 cctcaagcctgaagacctgcagcc 6136



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  cctcaagcctgaagaactgcagcc 163
            ||||||||||||||| ||||||||
Sbjct: 3443 cctcaagcctgaagacctgcagcc 3420
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>dbj|BS000029.1| Pan troglodytes chromosome 22 clone:RP43-172K02, map 22, complete
              sequences
          Length = 173573

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    agcaacaacaacagagatgc 351
              ||||||||||||||||||||
Sbjct: 140844 agcaacaacaacagagatgc 140863
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>emb|AL163213.2|HS21C013 Homo sapiens chromosome 21 segment HS21C013
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   agcaacaacaacagagatgc 351
             ||||||||||||||||||||
Sbjct: 50217 agcaacaacaacagagatgc 50236
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>gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone 399e10 containing Huntington's
              Disease gene; exons 1-67, complete sequence
          Length = 200348

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    gcagcaccttcttttgtagc 307
              ||||||||||||||||||||
Sbjct: 184050 gcagcaccttcttttgtagc 184031
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>tpe|BN000741.1| TPA: TPA_inf: Rattus norvegicus mRNA for galactosamine
           (N-acetyl)-6-sulfate sulfatase (galns gene)
          Length = 1575

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 tgccaccttctttgggagca 422
           ||||||||||||||||||||
Sbjct: 910 tgccaccttctttgggagca 891
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>emb|Z68756.1|HSL191F1 Human DNA sequence from clone LA04NC01-191F1 on chromosome 4,
            complete sequence
          Length = 40592

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  gcagcaccttcttttgtagc 307
            ||||||||||||||||||||
Sbjct: 1217 gcagcaccttcttttgtagc 1198
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>gb|AC092145.2| Homo sapiens chromosome 16 clone RP11-61F12, complete sequence
          Length = 113176

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   caatattaacacccacccca 137
             ||||||||||||||||||||
Sbjct: 86421 caatattaacacccacccca 86402
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>dbj|AP000473.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B291N6,
              LL56-APP region, complete sequence
          Length = 155448

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    agcaacaacaacagagatgc 351
              ||||||||||||||||||||
Sbjct: 135722 agcaacaacaacagagatgc 135741


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,817,755
Number of Sequences: 3902068
Number of extensions: 5817755
Number of successful extensions: 109116
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 108932
Number of HSP's gapped (non-prelim): 176
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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