>2DMA_HUMAN (P28067) HLA class II histocompatibility antigen, DM alpha chain|
           precursor (MHC class II antigen DMA)
          Length = 261

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 306 PEAADIYKHAGDSPALLAGKEICKCDPERIG 398
           PE AD  +  GD+PA+L  KE C+   ++IG
Sbjct: 83  PEFADWAQEQGDAPAILFDKEFCEWMIQQIG 113

>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3703

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +2

Query: 17   TIQTSLENATQLACTITPHSQTRNQSDLTHSYKMEHLHKLYNSLIQLRELQYNADRRAAP 196
            T++  L+ +    CT+   S T+    L H   + HLHKL       R LQ +A  +  P
Sbjct: 1534 TMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKL------KRALQESATGQPEP 1587

Query: 197  VSRSRN 214
             S   N
Sbjct: 1588 TSSPDN 1593

>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +2

Query: 17   TIQTSLENATQLACTITPHSQTRNQSDLTHSYKMEHLHKLYNSLIQLRELQYNADRRAAP 196
            T++  L+ +    CT+   S T+    L H   + HLHKL       R LQ +A  +  P
Sbjct: 1544 TMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKL------KRALQESATGQPEP 1597

Query: 197  VSRSRN 214
             S   N
Sbjct: 1598 TSSPDN 1603

>KPC1_CANAL (P43057) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1)|
          Length = 1097

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 129 CKCSILYEWVKSD*LRVCECGVMVQANC 46
           C C  +  W K +  +  ECGVM  A C
Sbjct: 495 CHCGYILPWGKKNVRKCTECGVMCHAQC 522

>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor|
          Length = 4007

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 215  CSAISTPVQLSCLRYIVAHVVVLGCCI-TCVSVPFYMSGLNPTD 87
            CSA S P++  CL+ +  +V+  G C+  C+S  +  SGL   D
Sbjct: 962  CSACSGPLKTDCLQCMDGYVLQDGACVEQCLSSFYQDSGLCKCD 1005

>HDA4_CAEBR (Q613L4) Histone deacetylase 4|
          Length = 892

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = +2

Query: 20  IQTSLENATQLACTITPHSQTRNQSDLTHSYKMEHLHKLYNSLIQLRELQYNADR 184
           +QT L+   Q    +  H Q R Q +L+    ++H+H LY +L Q ++LQ   +R
Sbjct: 59  LQTQLQEYRQKQMDLIGHFQ-RAQQELS----VQHMHNLYTALQQQQQLQSLQER 108

>O10S1_HUMAN (Q8NGN2) Olfactory receptor 10S1|
          Length = 322

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
 Frame = -3

Query: 230 GNKLWCSAISTPVQLSCLRY-IVAHVVVLGCCITCVSVPFYMSGLNPTD-----YEFVSV 69
           GN L    + +   LS   Y  + H+  L  C++ V+VP  M+GL   D     +E  +V
Sbjct: 45  GNLLILLTVGSDSHLSLPMYHFLGHLSFLDACLSTVTVPKVMAGLLTLDGKVISFEGCAV 104

Query: 68  VLWC 57
            L+C
Sbjct: 105 QLYC 108

>2ACA_HUMAN (Q06190) Serine/threonine-protein phosphatase 2A 72/130 kDa|
            regulatory subunit B (PP2A, subunit B, B''-PR72/PR130)
            (PP2A, subunit B, B72/B130 isoforms) (PP2A, subunit B,
            PR72/PR130 isoforms) (PP2A, subunit B, R3 isoform)
          Length = 1150

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = -3

Query: 494  YLEMCTRKWIEGGNYELCIEDVRDEIWDMVKPADPLRIALADLLSCKQGGTIASMLIDVR 315
            Y E C R    G    L   D+  ++ D+VKPA   +I L DL  C+          ++ 
Sbjct: 1001 YEEQCERMEAMGIE-PLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLE 1059

Query: 314  GFWAHDNR 291
             +  H+ R
Sbjct: 1060 KYLDHEQR 1067


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,091,599
Number of Sequences: 219361
Number of extensions: 1338353
Number of successful extensions: 3344
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3344
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)