| Clone Name | rbags20o24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY336990.1| Oryza sativa (japonica cultivar-group) CUL1 mRNA, complete cds Length = 2478 Score = 327 bits (165), Expect = 3e-86 Identities = 285/325 (87%) Strand = Plus / Minus Query: 355 atcaagccaagtatcggtagacgttcgggttctccttgtccctctccaggtaatccctgg 414 ||||||||||||||| ||| || || ||||| || || |||||||||| ||||||||| | Sbjct: 2320 atcaagccaagtatctgtacacatttgggttgtctttatccctctccaagtaatcccttg 2261 Query: 415 ttataagatcctcaatgcgcttctttattgctttgaagtcaggcttgaacatgcgaccaa 474 | |||||||||||||| |||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 2260 tgataagatcctcaattcgcttctttattgccttgaagtcaggcttaaacatgcgtccaa 2201 Query: 475 gctgctccacacactccattactagtgtctggtgacccaagactttgcggctcttcataa 534 ||||||||||||| ||||| || ||| ||| |||||||| |||||||| |||||||||| Sbjct: 2200 gctgctccacacattccatcacaagttgctgatgacccaatactttgcgactcttcataa 2141 Query: 535 tacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaacatcttcaacaacct 594 |||| |||||||||||||||||||||||||| |||||||| |||||||||||||| || | Sbjct: 2140 tacgcacaattgatgcatcaattgcgtatctgcgatccttatcaacatcttcaactactt 2081 Query: 595 tctttttctcatcaactggaggcagaggtatcttaattctcctcatcttgtcagtaaatt 654 |||| ||||||||||||||||| ||||||||||| | ||| | || |||||||||||| | Sbjct: 2080 tcttcttctcatcaactggaggaagaggtatctttaatcttcgcagcttgtcagtaaact 2021 Query: 655 ttgaattaaattcaaatacatcatt 679 |||| || || || || |||||||| Sbjct: 2020 ttgagttgaactcgaagacatcatt 1996
>dbj|AK104340.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G02, full insert sequence Length = 2950 Score = 327 bits (165), Expect = 3e-86 Identities = 285/325 (87%) Strand = Plus / Minus Query: 355 atcaagccaagtatcggtagacgttcgggttctccttgtccctctccaggtaatccctgg 414 ||||||||||||||| ||| || || ||||| || || |||||||||| ||||||||| | Sbjct: 2377 atcaagccaagtatctgtacacatttgggttgtctttatccctctccaagtaatcccttg 2318 Query: 415 ttataagatcctcaatgcgcttctttattgctttgaagtcaggcttgaacatgcgaccaa 474 | |||||||||||||| |||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 2317 tgataagatcctcaattcgcttctttattgccttgaagtcaggcttaaacatgcgtccaa 2258 Query: 475 gctgctccacacactccattactagtgtctggtgacccaagactttgcggctcttcataa 534 ||||||||||||| ||||| || ||| ||| |||||||| |||||||| |||||||||| Sbjct: 2257 gctgctccacacattccatcacaagttgctgatgacccaatactttgcgactcttcataa 2198 Query: 535 tacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaacatcttcaacaacct 594 |||| |||||||||||||||||||||||||| |||||||| |||||||||||||| || | Sbjct: 2197 tacgcacaattgatgcatcaattgcgtatctgcgatccttatcaacatcttcaactactt 2138 Query: 595 tctttttctcatcaactggaggcagaggtatcttaattctcctcatcttgtcagtaaatt 654 |||| ||||||||||||||||| ||||||||||| | ||| | || |||||||||||| | Sbjct: 2137 tcttcttctcatcaactggaggaagaggtatctttaatcttcgcagcttgtcagtaaact 2078 Query: 655 ttgaattaaattcaaatacatcatt 679 |||| || || || || |||||||| Sbjct: 2077 ttgagttgaactcgaagacatcatt 2053
>dbj|AK064940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P07, full insert sequence Length = 3029 Score = 327 bits (165), Expect = 3e-86 Identities = 285/325 (87%) Strand = Plus / Minus Query: 355 atcaagccaagtatcggtagacgttcgggttctccttgtccctctccaggtaatccctgg 414 ||||||||||||||| ||| || || ||||| || || |||||||||| ||||||||| | Sbjct: 2429 atcaagccaagtatctgtacacatttgggttgtctttatccctctccaagtaatcccttg 2370 Query: 415 ttataagatcctcaatgcgcttctttattgctttgaagtcaggcttgaacatgcgaccaa 474 | |||||||||||||| |||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 2369 tgataagatcctcaattcgcttctttattgccttgaagtcaggcttaaacatgcgtccaa 2310 Query: 475 gctgctccacacactccattactagtgtctggtgacccaagactttgcggctcttcataa 534 ||||||||||||| ||||| || ||| ||| |||||||| |||||||| |||||||||| Sbjct: 2309 gctgctccacacattccatcacaagttgctgatgacccaatactttgcgactcttcataa 2250 Query: 535 tacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaacatcttcaacaacct 594 |||| |||||||||||||||||||||||||| |||||||| |||||||||||||| || | Sbjct: 2249 tacgcacaattgatgcatcaattgcgtatctgcgatccttatcaacatcttcaactactt 2190 Query: 595 tctttttctcatcaactggaggcagaggtatcttaattctcctcatcttgtcagtaaatt 654 |||| ||||||||||||||||| ||||||||||| | ||| | || |||||||||||| | Sbjct: 2189 tcttcttctcatcaactggaggaagaggtatctttaatcttcgcagcttgtcagtaaact 2130 Query: 655 ttgaattaaattcaaatacatcatt 679 |||| || || || || |||||||| Sbjct: 2129 ttgagttgaactcgaagacatcatt 2105
>ref|NM_193822.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2199 Score = 325 bits (164), Expect = 1e-85 Identities = 284/324 (87%) Strand = Plus / Minus Query: 356 tcaagccaagtatcggtagacgttcgggttctccttgtccctctccaggtaatccctggt 415 |||||||||||||| ||| || || ||||| || || |||||||||| ||||||||| || Sbjct: 2199 tcaagccaagtatctgtacacatttgggttgtctttatccctctccaagtaatcccttgt 2140 Query: 416 tataagatcctcaatgcgcttctttattgctttgaagtcaggcttgaacatgcgaccaag 475 |||||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 2139 gataagatcctcaattcgcttctttattgccttgaagtcaggcttaaacatgcgtccaag 2080 Query: 476 ctgctccacacactccattactagtgtctggtgacccaagactttgcggctcttcataat 535 |||||||||||| ||||| || ||| ||| |||||||| |||||||| ||||||||||| Sbjct: 2079 ctgctccacacattccatcacaagttgctgatgacccaatactttgcgactcttcataat 2020 Query: 536 acgaacaattgatgcatcaattgcgtatcttcgatccttgtcaacatcttcaacaacctt 595 ||| |||||||||||||||||||||||||| |||||||| |||||||||||||| || || Sbjct: 2019 acgcacaattgatgcatcaattgcgtatctgcgatccttatcaacatcttcaactacttt 1960 Query: 596 ctttttctcatcaactggaggcagaggtatcttaattctcctcatcttgtcagtaaattt 655 ||| ||||||||||||||||| ||||||||||| | ||| | || |||||||||||| || Sbjct: 1959 cttcttctcatcaactggaggaagaggtatctttaatcttcgcagcttgtcagtaaactt 1900 Query: 656 tgaattaaattcaaatacatcatt 679 ||| || || || || |||||||| Sbjct: 1899 tgagttgaactcgaagacatcatt 1876
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 462 aacatgcgaccaagctgctccacacactccattactagtgtctggtgacccaagactttg 521 |||||||| ||||||||||||||||| ||||| || ||| ||| |||||||| |||||| Sbjct: 130006 aacatgcgtccaagctgctccacacattccatcacaagttgctgatgacccaatactttg 130065 Query: 522 cggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaaca 581 || |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct: 130066 cgactcttcataatacgcacaattgatgcatcaattgcgtatctgcgatccttatcaaca 130125 Query: 582 tcttcaacaaccttctttttctcatcaactggaggcagaggtatct 627 |||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 130126 tcttcaactactttcttcttctcatcaactggaggaagaggtatct 130171 Score = 113 bits (57), Expect = 8e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 355 atcaagccaagtatcggtagacgttcgggttctccttgtccctctccaggtaatccctgg 414 ||||||||||||||| ||| || || ||||| || || |||||||||| ||||||||| | Sbjct: 129530 atcaagccaagtatctgtacacatttgggttgtctttatccctctccaagtaatcccttg 129589 Query: 415 ttataagatcctcaatgcgcttctttattgctttgaagtcaggct 459 | |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 129590 tgataagatcctcaattcgcttctttattgccttgaagtcaggct 129634 Score = 48.1 bits (24), Expect = 0.038 Identities = 75/92 (81%) Strand = Plus / Minus Query: 516 actttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttg 575 ||||||||||| ||||| || || |||| ||||||||||||||| | || | |||||| Sbjct: 149689 actttgcggcttttcatgatgcgcacaagagatgcatcaattgcgaacctcctgtccttg 149630 Query: 576 tcaacatcttcaacaaccttctttttctcatc 607 | ||||| || |||||||| || |||||||| Sbjct: 149629 ttgacatcatcgacaacctttttcttctcatc 149598
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 462 aacatgcgaccaagctgctccacacactccattactagtgtctggtgacccaagactttg 521 |||||||| ||||||||||||||||| ||||| || ||| ||| |||||||| |||||| Sbjct: 67615 aacatgcgtccaagctgctccacacattccatcacaagttgctgatgacccaatactttg 67674 Query: 522 cggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaaca 581 || |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct: 67675 cgactcttcataatacgcacaattgatgcatcaattgcgtatctgcgatccttatcaaca 67734 Query: 582 tcttcaacaaccttctttttctcatcaactggaggcagaggtatct 627 |||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 67735 tcttcaactactttcttcttctcatcaactggaggaagaggtatct 67780 Score = 113 bits (57), Expect = 8e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 355 atcaagccaagtatcggtagacgttcgggttctccttgtccctctccaggtaatccctgg 414 ||||||||||||||| ||| || || ||||| || || |||||||||| ||||||||| | Sbjct: 67139 atcaagccaagtatctgtacacatttgggttgtctttatccctctccaagtaatcccttg 67198 Query: 415 ttataagatcctcaatgcgcttctttattgctttgaagtcaggct 459 | |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 67199 tgataagatcctcaattcgcttctttattgccttgaagtcaggct 67243 Score = 48.1 bits (24), Expect = 0.038 Identities = 75/92 (81%) Strand = Plus / Minus Query: 516 actttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttg 575 ||||||||||| ||||| || || |||| ||||||||||||||| | || | |||||| Sbjct: 87299 actttgcggcttttcatgatgcgcacaagagatgcatcaattgcgaacctcctgtccttg 87240 Query: 576 tcaacatcttcaacaaccttctttttctcatc 607 | ||||| || |||||||| || |||||||| Sbjct: 87239 ttgacatcatcgacaacctttttcttctcatc 87208
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 462 aacatgcgaccaagctgctccacacactccattactagtgtctggtgacccaagactttg 521 |||||||| ||||||||||||||||| ||||| || ||| ||| |||||||| |||||| Sbjct: 15113954 aacatgcgtccaagctgctccacacattccatcacaagttgctgatgacccaatactttg 15114013 Query: 522 cggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaaca 581 || |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct: 15114014 cgactcttcataatacgcacaattgatgcatcaattgcgtatctgcgatccttatcaaca 15114073 Query: 582 tcttcaacaaccttctttttctcatcaactggaggcagaggtatct 627 |||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 15114074 tcttcaactactttcttcttctcatcaactggaggaagaggtatct 15114119 Score = 113 bits (57), Expect = 8e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 355 atcaagccaagtatcggtagacgttcgggttctccttgtccctctccaggtaatccctgg 414 ||||||||||||||| ||| || || ||||| || || |||||||||| ||||||||| | Sbjct: 15113478 atcaagccaagtatctgtacacatttgggttgtctttatccctctccaagtaatcccttg 15113537 Query: 415 ttataagatcctcaatgcgcttctttattgctttgaagtcaggct 459 | |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 15113538 tgataagatcctcaattcgcttctttattgccttgaagtcaggct 15113582 Score = 48.1 bits (24), Expect = 0.038 Identities = 75/92 (81%) Strand = Plus / Minus Query: 516 actttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttg 575 ||||||||||| ||||| || || |||| ||||||||||||||| | || | |||||| Sbjct: 15133637 actttgcggcttttcatgatgcgcacaagagatgcatcaattgcgaacctcctgtccttg 15133578 Query: 576 tcaacatcttcaacaaccttctttttctcatc 607 | ||||| || |||||||| || |||||||| Sbjct: 15133577 ttgacatcatcgacaacctttttcttctcatc 15133546 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 caacaaccttctttttctcat 606 ||||||||||||||||||||| Sbjct: 12275012 caacaaccttctttttctcat 12275032
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1329D01 Length = 141938 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 462 aacatgcgaccaagctgctccacacactccattactagtgtctggtgacccaagactttg 521 |||||||| ||||||||||||||||| ||||| || ||| ||| |||||||| |||||| Sbjct: 140201 aacatgcgtccaagctgctccacacattccatcacaagttgctgatgacccaatactttg 140260 Query: 522 cggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaaca 581 || |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct: 140261 cgactcttcataatacgcacaattgatgcatcaattgcgtatctgcgatccttatcaaca 140320 Query: 582 tcttcaacaaccttctttttctcatcaactggaggcagaggtatct 627 |||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 140321 tcttcaactactttcttcttctcatcaactggaggaagaggtatct 140366 Score = 113 bits (57), Expect = 8e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 355 atcaagccaagtatcggtagacgttcgggttctccttgtccctctccaggtaatccctgg 414 ||||||||||||||| ||| || || ||||| || || |||||||||| ||||||||| | Sbjct: 139725 atcaagccaagtatctgtacacatttgggttgtctttatccctctccaagtaatcccttg 139784 Query: 415 ttataagatcctcaatgcgcttctttattgctttgaagtcaggct 459 | |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 139785 tgataagatcctcaattcgcttctttattgccttgaagtcaggct 139829
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 462 aacatgcgaccaagctgctccacacactccattactagtgtctggtgacccaagactttg 521 |||||||| ||||||||||||||||| ||||| || ||| ||| |||||||| |||||| Sbjct: 85920 aacatgcgtccaagctgctccacacattccatcacaagttgctgatgacccaatactttg 85979 Query: 522 cggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaaca 581 || |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct: 85980 cgactcttcataatacgcacaattgatgcatcaattgcgtatctgcgatccttatcaaca 86039 Query: 582 tcttcaacaaccttctttttctcatcaactggaggcagaggtatct 627 |||||||| || ||||| ||||||||||||||||| |||||||||| Sbjct: 86040 tcttcaactactttcttcttctcatcaactggaggaagaggtatct 86085 Score = 113 bits (57), Expect = 8e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 355 atcaagccaagtatcggtagacgttcgggttctccttgtccctctccaggtaatccctgg 414 ||||||||||||||| ||| || || ||||| || || |||||||||| ||||||||| | Sbjct: 85444 atcaagccaagtatctgtacacatttgggttgtctttatccctctccaagtaatcccttg 85503 Query: 415 ttataagatcctcaatgcgcttctttattgctttgaagtcaggct 459 | |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 85504 tgataagatcctcaattcgcttctttattgccttgaagtcaggct 85548 Score = 48.1 bits (24), Expect = 0.038 Identities = 75/92 (81%) Strand = Plus / Minus Query: 516 actttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttg 575 ||||||||||| ||||| || || |||| ||||||||||||||| | || | |||||| Sbjct: 105603 actttgcggcttttcatgatgcgcacaagagatgcatcaattgcgaacctcctgtccttg 105544 Query: 576 tcaacatcttcaacaaccttctttttctcatc 607 | ||||| || |||||||| || |||||||| Sbjct: 105543 ttgacatcatcgacaacctttttcttctcatc 105512
>gb|AY106256.1| Zea mays PCO138766 mRNA sequence Length = 1503 Score = 202 bits (102), Expect = 1e-48 Identities = 248/294 (84%), Gaps = 2/294 (0%) Strand = Plus / Minus Query: 387 tccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttattgct 446 |||||||| | ||||| || ||||| || || ||||||||||| | ||||||||| ||| Sbjct: 1073 tccttgtcgcgctccaaatagtcccttgtgatgagatcctcaatcctcttctttatggct 1014 Query: 447 ttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattactag-tgtctg 505 |||||||| ||||| |||||||| | ||||||||| ||||| || || || ||| || Sbjct: 1013 ttgaagtccggcttaaacatgcggctaagctgctcaacacattcagcaaccagctgt-tg 955 Query: 506 gtgacccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtatct 565 ||||||| |||||||||||||||||||| || |||||||||||||||||||| || || Sbjct: 954 atgacccataactttgcggctcttcataatgcgcacaattgatgcatcaattgcatacct 895 Query: 566 tcgatccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggtat 625 | || ||||||||||||||||||||||| || ||||||||||| |||||||| || || Sbjct: 894 cctgtctttgtcaacatcttcaacaacctttttcttctcatcaacgggaggcagtggaat 835 Query: 626 cttaattctcctcatcttgtcagtaaattttgaattaaattcaaatacatcatt 679 ||||||||| ||||| ||||||||||||||||||| || ||||| |||||||| Sbjct: 834 cttaattcttctcattctgtcagtaaattttgaattgaactcaaaaacatcatt 781
>dbj|AK073947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073A13, full insert sequence Length = 2869 Score = 194 bits (98), Expect = 3e-46 Identities = 233/278 (83%) Strand = Plus / Minus Query: 399 tccaggtaatccctggttataagatcctcaatgcgcttctttattgctttgaagtcaggc 458 |||||||||||||| || || || ||||| || |||||||| || ||||||||||||||| Sbjct: 2418 tccaggtaatcccttgtgatgaggtcctcgattcgcttcttgatggctttgaagtcaggc 2359 Query: 459 ttgaacatgcgaccaagctgctccacacactccattactagtgtctggtgacccaagact 518 ||||||||||| | |||||||||||||| ||| ||||| ||| || |||| ||| Sbjct: 2358 ttgaacatgcggctgagctgctccacacattccgcaactagctgctgatggcccataact 2299 Query: 519 ttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtca 578 ||||| ||||||||||| || ||||| |||||||||||||| || | | ||||||||| Sbjct: 2298 ttgcgactcttcataatgcgcacaatcgatgcatcaattgcataccgcctgtccttgtca 2239 Query: 579 acatcttcaacaaccttctttttctcatcaactggaggcagaggtatcttaattctcctc 638 |||||||| |||||||| || || |||||||| ||||| || |||||||||||||| ||| Sbjct: 2238 acatcttcgacaacctttttcttttcatcaacaggaggtaggggtatcttaattcttctc 2179 Query: 639 atcttgtcagtaaattttgaattaaattcaaatacatc 676 ||| ||||||| ||||||||||| || ||||| ||||| Sbjct: 2178 atcctgtcagtgaattttgaattgaactcaaaaacatc 2141
>dbj|AK061409.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-B07, full insert sequence Length = 1189 Score = 194 bits (98), Expect = 3e-46 Identities = 233/278 (83%) Strand = Plus / Minus Query: 399 tccaggtaatccctggttataagatcctcaatgcgcttctttattgctttgaagtcaggc 458 |||||||||||||| || || || ||||| || |||||||| || ||||||||||||||| Sbjct: 738 tccaggtaatcccttgtgatgaggtcctcgattcgcttcttgatggctttgaagtcaggc 679 Query: 459 ttgaacatgcgaccaagctgctccacacactccattactagtgtctggtgacccaagact 518 ||||||||||| | |||||||||||||| ||| ||||| ||| || |||| ||| Sbjct: 678 ttgaacatgcggctgagctgctccacacattccgcaactagctgctgatggcccataact 619 Query: 519 ttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtca 578 ||||| ||||||||||| || ||||| |||||||||||||| || | | ||||||||| Sbjct: 618 ttgcgactcttcataatgcgcacaatcgatgcatcaattgcataccgcctgtccttgtca 559 Query: 579 acatcttcaacaaccttctttttctcatcaactggaggcagaggtatcttaattctcctc 638 |||||||| |||||||| || || |||||||| ||||| || |||||||||||||| ||| Sbjct: 558 acatcttcgacaacctttttcttttcatcaacaggaggtaggggtatcttaattcttctc 499 Query: 639 atcttgtcagtaaattttgaattaaattcaaatacatc 676 ||| ||||||| ||||||||||| || ||||| ||||| Sbjct: 498 atcctgtcagtgaattttgaattgaactcaaaaacatc 461
>gb|BT013673.1| Lycopersicon esculentum clone 132492F, mRNA sequence Length = 2887 Score = 174 bits (88), Expect = 2e-40 Identities = 238/288 (82%) Strand = Plus / Minus Query: 390 ttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttattgctttg 449 ||||||||||| |||||||| || ||||| | ||| || || | |||||| || |||||| Sbjct: 2376 ttgtccctctctaggtaatctctagttatcaaatcttcgattctcttcttgatagctttg 2317 Query: 450 aagtcaggcttgaacatgcgaccaagctgctccacacactccattactagtgtctggtga 509 | ||||||||||||||||| || | |||||| || |||||||| |||||| ||||| Sbjct: 2316 acatcaggcttgaacatgcgccccaactgctcaacgcactccatgactagttgctggtag 2257 Query: 510 cccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcga 569 ||||| ||||| ||||||||||||||||| |||||||| ||||| || || || | | | Sbjct: 2256 cccaatactttacggctcttcataatacgcacaattgaagcatctatagcataccgccta 2197 Query: 570 tccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggtatctta 629 ||||||||||| ||||||| ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 2196 tccttgtcaacgtcttcaattacctttttcttctcatcaacaggagggagaggtatcttg 2137 Query: 630 attctcctcatcttgtcagtaaattttgaattaaattcaaatacatca 677 || |||||||| |||||||| || ||||| || || ||||| |||||| Sbjct: 2136 atcctcctcattttgtcagtgaactttgagttgaactcaaagacatca 2089
>emb|AJ344535.1|NTA344535 Nicotiana tabacum partial mRNA for cullin 1C (cul1C gene) Length = 1833 Score = 167 bits (84), Expect = 6e-38 Identities = 225/272 (82%) Strand = Plus / Minus Query: 377 gttcgggttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgctt 436 ||||||||| || ||||| ||||| |||||||| || ||||| | ||| ||||| | ||| Sbjct: 1325 gttcgggttatctttgtctctctctaggtaatctctagttatcaaatcttcaattctctt 1266 Query: 437 ctttattgctttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattac 496 ||| || ||||||| |||||||||||||||||| || | |||||| ||||||||||| || Sbjct: 1265 cttgatagctttgacgtcaggcttgaacatgcgtcccaactgctcaacacactccatgac 1206 Query: 497 tagtgtctggtgacccaagactttgcggctcttcataatacgaacaattgatgcatcaat 556 |||| ||||| ||||| ||||| || |||||||||||||| |||||||| ||||| || Sbjct: 1205 tagttgctggtagcccaatactttacgactcttcataatacgcacaattgaagcatctat 1146 Query: 557 tgcgtatcttcgatccttgtcaacatcttcaacaaccttctttttctcatcaactggagg 616 || || | | |||||||||||||||||||| ||||| || |||||||| | || || Sbjct: 1145 agcataccgcctatccttgtcaacatcttcaattacctttttcttctcatcctcaggcgg 1086 Query: 617 cagaggtatcttaattctcctcatcttgtcag 648 ||||||||||| || |||||||| ||||||| Sbjct: 1085 gagaggtatcttgatcctcctcattttgtcag 1054
>dbj|AB080190.1| Pisum sativum cul1 mRNA for cullin-like protein1, complete cds Length = 2724 Score = 155 bits (78), Expect = 2e-34 Identities = 206/246 (83%), Gaps = 2/246 (0%) Strand = Plus / Minus Query: 426 tcaatgcgcttctttattgctttgaagtcaggcttgaacatgcgaccaagctgctccaca 485 ||||| |||||||| ||||| |||| || ||||| |||||||| || | ||||||||| Sbjct: 2387 tcaatacgcttcttaattgccttgacatcgggcttaaacatgcggcctaactgctccacg 2328 Query: 486 cactccattactag-tgtctggtgacccaagactttgcggctcttcataatacgaacaat 544 |||||||| |||| ||| |||| || ||| ||||| || |||||||||||||||||||| Sbjct: 2327 cactccataactaactgt-tggtaactcaaaactttccgactcttcataatacgaacaat 2269 Query: 545 tgatgcatcaattgcgtatcttcgatccttgtcaacatcttcaacaaccttctttttctc 604 ||| |||||||| || ||||||| |||||||||||||| |||| || || || ||||| Sbjct: 2268 tgaggcatcaatagcatatcttctgtccttgtcaacatcctcaattacttttttcttctc 2209 Query: 605 atcaactggaggcagaggtatcttaattctcctcatcttgtcagtaaattttgaattaaa 664 ||| || ||||| ||||| ||||| || |||||||| ||||| |||||||| |||||||| Sbjct: 2208 atccacaggaggaagaggaatcttgatcctcctcattttgtctgtaaatttggaattaaa 2149 Query: 665 ttcaaa 670 |||||| Sbjct: 2148 ttcaaa 2143
>ref|NM_116491.2| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.1 mRNA, complete cds Length = 2747 Score = 93.7 bits (47), Expect = 7e-16 Identities = 200/251 (79%) Strand = Plus / Minus Query: 384 ttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttatt 443 ||||||||||||||||||| ||||| |||||||| | |||||| || |||||||| || Sbjct: 2458 ttctccttgtccctctccaaataatctctggttattaaatcctccatacgcttcttgatc 2399 Query: 444 gctttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattactagtgtc 503 ||||||| |||||||||||||| || | ||| ||||| |||||||| || ||| Sbjct: 2398 gctttgatatcaggcttgaacattcggctaagttgctcaacacactcagaaacaagttgt 2339 Query: 504 tggtgacccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtat 563 || || ||||| ||||| | ||||||||| || | ||||| | ||||||||||| ||| Sbjct: 2338 tgatgtcccaatactttcctgctcttcatgatcctgacaatggcagcatcaattgcatat 2279 Query: 564 cttcgatccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggt 623 |||| || || || ||||||||||| || ||||| | ||||||||||| || ||||| Sbjct: 2278 cttctgtctttatcgacatcttcaacgactttcttcctttcatcaactgggggaagaggg 2219 Query: 624 atcttaattct 634 ||||| ||||| Sbjct: 2218 atcttgattct 2208
>ref|NM_001036498.1| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.2 mRNA, complete cds Length = 2655 Score = 93.7 bits (47), Expect = 7e-16 Identities = 200/251 (79%) Strand = Plus / Minus Query: 384 ttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttatt 443 ||||||||||||||||||| ||||| |||||||| | |||||| || |||||||| || Sbjct: 2366 ttctccttgtccctctccaaataatctctggttattaaatcctccatacgcttcttgatc 2307 Query: 444 gctttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattactagtgtc 503 ||||||| |||||||||||||| || | ||| ||||| |||||||| || ||| Sbjct: 2306 gctttgatatcaggcttgaacattcggctaagttgctcaacacactcagaaacaagttgt 2247 Query: 504 tggtgacccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtat 563 || || ||||| ||||| | ||||||||| || | ||||| | ||||||||||| ||| Sbjct: 2246 tgatgtcccaatactttcctgctcttcatgatcctgacaatggcagcatcaattgcatat 2187 Query: 564 cttcgatccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggt 623 |||| || || || ||||||||||| || ||||| | ||||||||||| || ||||| Sbjct: 2186 cttctgtctttatcgacatcttcaacgactttcttcctttcatcaactgggggaagaggg 2127 Query: 624 atcttaattct 634 ||||| ||||| Sbjct: 2126 atcttgattct 2116
>ref|NM_001036499.1| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.3 mRNA, complete cds Length = 2653 Score = 93.7 bits (47), Expect = 7e-16 Identities = 200/251 (79%) Strand = Plus / Minus Query: 384 ttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttatt 443 ||||||||||||||||||| ||||| |||||||| | |||||| || |||||||| || Sbjct: 2364 ttctccttgtccctctccaaataatctctggttattaaatcctccatacgcttcttgatc 2305 Query: 444 gctttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattactagtgtc 503 ||||||| |||||||||||||| || | ||| ||||| |||||||| || ||| Sbjct: 2304 gctttgatatcaggcttgaacattcggctaagttgctcaacacactcagaaacaagttgt 2245 Query: 504 tggtgacccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtat 563 || || ||||| ||||| | ||||||||| || | ||||| | ||||||||||| ||| Sbjct: 2244 tgatgtcccaatactttcctgctcttcatgatcctgacaatggcagcatcaattgcatat 2185 Query: 564 cttcgatccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggt 623 |||| || || || ||||||||||| || ||||| | ||||||||||| || ||||| Sbjct: 2184 cttctgtctttatcgacatcttcaacgactttcttcctttcatcaactgggggaagaggg 2125 Query: 624 atcttaattct 634 ||||| ||||| Sbjct: 2124 atcttgattct 2114
>gb|AY133878.1| Arabidopsis thaliana clone U09998 putative cullin 1 protein (AT4g02570) mRNA, complete cds Length = 2248 Score = 93.7 bits (47), Expect = 7e-16 Identities = 200/251 (79%) Strand = Plus / Minus Query: 384 ttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttatt 443 ||||||||||||||||||| ||||| |||||||| | |||||| || |||||||| || Sbjct: 2189 ttctccttgtccctctccaaataatctctggttattaaatcctccatacgcttcttgatc 2130 Query: 444 gctttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattactagtgtc 503 ||||||| |||||||||||||| || | ||| ||||| |||||||| || ||| Sbjct: 2129 gctttgatatcaggcttgaacattcggctaagttgctcaacacactcagaaacaagttgt 2070 Query: 504 tggtgacccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtat 563 || || ||||| ||||| | ||||||||| || | ||||| | ||||||||||| ||| Sbjct: 2069 tgatgtcccaatactttcctgctcttcatgatcctgacaatggcagcatcaattgcatat 2010 Query: 564 cttcgatccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggt 623 |||| || || || ||||||||||| || ||||| | ||||||||||| || ||||| Sbjct: 2009 cttctgtctttatcgacatcttcaacgactttcttcctttcatcaactgggggaagaggg 1950 Query: 624 atcttaattct 634 ||||| ||||| Sbjct: 1949 atcttgattct 1939
>gb|AY046030.1| Arabidopsis thaliana putative cullin 1 protein (At4g02570) mRNA, complete cds Length = 2748 Score = 93.7 bits (47), Expect = 7e-16 Identities = 200/251 (79%) Strand = Plus / Minus Query: 384 ttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttatt 443 ||||||||||||||||||| ||||| |||||||| | |||||| || |||||||| || Sbjct: 2445 ttctccttgtccctctccaaataatctctggttattaaatcctccatacgcttcttgatc 2386 Query: 444 gctttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattactagtgtc 503 ||||||| |||||||||||||| || | ||| ||||| |||||||| || ||| Sbjct: 2385 gctttgatatcaggcttgaacattcggctaagttgctcaacacactcagaaacaagttgt 2326 Query: 504 tggtgacccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtat 563 || || ||||| ||||| | ||||||||| || | ||||| | ||||||||||| ||| Sbjct: 2325 tgatgtcccaatactttcctgctcttcatgatcctgacaatggcagcatcaattgcatat 2266 Query: 564 cttcgatccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggt 623 |||| || || || ||||||||||| || ||||| | ||||||||||| || ||||| Sbjct: 2265 cttctgtctttatcgacatcttcaacgactttcttcctttcatcaactgggggaagaggg 2206 Query: 624 atcttaattct 634 ||||| ||||| Sbjct: 2205 atcttgattct 2195
>emb|AJ318017.1|ATH318017 Arabidopsis thaliana mRNA for cullin 1 (cul1 gene) Length = 2456 Score = 93.7 bits (47), Expect = 7e-16 Identities = 200/251 (79%) Strand = Plus / Minus Query: 384 ttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttatt 443 ||||||||||||||||||| ||||| |||||||| | |||||| || |||||||| || Sbjct: 2223 ttctccttgtccctctccaaataatctctggttattaaatcctccatacgcttcttgatc 2164 Query: 444 gctttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattactagtgtc 503 ||||||| |||||||||||||| || | ||| ||||| |||||||| || ||| Sbjct: 2163 gctttgatatcaggcttgaacattcggctaagttgctcaacacactcagaaacaagttgt 2104 Query: 504 tggtgacccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtat 563 || || ||||| ||||| | ||||||||| || | ||||| | ||||||||||| ||| Sbjct: 2103 tgatgtcccaatactttcctgctcttcatgatcctgacaatggcagcatcaattgcatat 2044 Query: 564 cttcgatccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggt 623 |||| || || || ||||||||||| || ||||| | ||||||||||| || ||||| Sbjct: 2043 cttctgtctttatcgacatcttcaacgactttcttcctttcatcaactgggggaagaggg 1984 Query: 624 atcttaattct 634 ||||| ||||| Sbjct: 1983 atcttgattct 1973
>dbj|AK222216.1| Arabidopsis thaliana mRNA for putative cullin-like 1 protein, partial cds, clone: RAFL25-25-H19 Length = 979 Score = 93.7 bits (47), Expect = 7e-16 Identities = 200/251 (79%) Strand = Plus / Minus Query: 384 ttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttatt 443 ||||||||||||||||||| ||||| |||||||| | |||||| || |||||||| || Sbjct: 721 ttctccttgtccctctccaaataatctctggttattaaatcctccatacgcttcttgatc 662 Query: 444 gctttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattactagtgtc 503 ||||||| |||||||||||||| || | ||| ||||| |||||||| || ||| Sbjct: 661 gctttgatatcaggcttgaacattcggctaagttgctcaacacactcagaaacaagttgt 602 Query: 504 tggtgacccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtat 563 || || ||||| ||||| | ||||||||| || | ||||| | ||||||||||| ||| Sbjct: 601 tgatgtcccaatactttcctgctcttcatgatcctgacaatggcagcatcaattgcatat 542 Query: 564 cttcgatccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggt 623 |||| || || || ||||||||||| || ||||| | ||||||||||| || ||||| Sbjct: 541 cttctgtctttatcgacatcttcaacgactttcttcctttcatcaactgggggaagaggg 482 Query: 624 atcttaattct 634 ||||| ||||| Sbjct: 481 atcttgattct 471
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 91.7 bits (46), Expect = 3e-15 Identities = 139/170 (81%) Strand = Plus / Plus Query: 458 cttgaacatgcgaccaagctgctccacacactccattactagtgtctggtgacccaagac 517 |||||||||||| | |||||||||||||| ||| ||||| ||| || |||| || Sbjct: 52934 cttgaacatgcggctgagctgctccacacattccgcaactagctgctgatggcccataac 52993 Query: 518 tttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtc 577 |||||| ||||||||||| || ||||| |||||||||||||| || | | |||||||| Sbjct: 52994 tttgcgactcttcataatgcgcacaatcgatgcatcaattgcataccgcctgtccttgtc 53053 Query: 578 aacatcttcaacaaccttctttttctcatcaactggaggcagaggtatct 627 ||||||||| |||||||| || || |||||||| ||||| || ||||||| Sbjct: 53054 aacatcttcgacaacctttttcttttcatcaacaggaggtaggggtatct 53103 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 399 tccaggtaatccctggttataagatcctcaatgcgcttctttattgctttgaagtcaggc 458 |||||||||||||| || || || ||||| || |||||||| || ||||||||||||||| Sbjct: 52586 tccaggtaatcccttgtgatgaggtcctcgattcgcttcttgatggctttgaagtcaggc 52645 Query: 459 t 459 | Sbjct: 52646 t 52646 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 626 cttaattctcctcatcttgtcagtaaattttgaattaaattcaaatacatc 676 ||||||||| |||||| ||||||| ||||||||||| || ||||| ||||| Sbjct: 53198 cttaattcttctcatcctgtcagtgaattttgaattgaactcaaaaacatc 53248
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 91.7 bits (46), Expect = 3e-15 Identities = 139/170 (81%) Strand = Plus / Minus Query: 458 cttgaacatgcgaccaagctgctccacacactccattactagtgtctggtgacccaagac 517 |||||||||||| | |||||||||||||| ||| ||||| ||| || |||| || Sbjct: 92964 cttgaacatgcggctgagctgctccacacattccgcaactagctgctgatggcccataac 92905 Query: 518 tttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtc 577 |||||| ||||||||||| || ||||| |||||||||||||| || | | |||||||| Sbjct: 92904 tttgcgactcttcataatgcgcacaatcgatgcatcaattgcataccgcctgtccttgtc 92845 Query: 578 aacatcttcaacaaccttctttttctcatcaactggaggcagaggtatct 627 ||||||||| |||||||| || || |||||||| ||||| || ||||||| Sbjct: 92844 aacatcttcgacaacctttttcttttcatcaacaggaggtaggggtatct 92795 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 399 tccaggtaatccctggttataagatcctcaatgcgcttctttattgctttgaagtcaggc 458 |||||||||||||| || || || ||||| || |||||||| || ||||||||||||||| Sbjct: 93312 tccaggtaatcccttgtgatgaggtcctcgattcgcttcttgatggctttgaagtcaggc 93253 Query: 459 t 459 | Sbjct: 93252 t 93252 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 626 cttaattctcctcatcttgtcagtaaattttgaattaaattcaaatacatc 676 ||||||||| |||||| ||||||| ||||||||||| || ||||| ||||| Sbjct: 92700 cttaattcttctcatcctgtcagtgaattttgaattgaactcaaaaacatc 92650
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 91.7 bits (46), Expect = 3e-15 Identities = 139/170 (81%) Strand = Plus / Plus Query: 458 cttgaacatgcgaccaagctgctccacacactccattactagtgtctggtgacccaagac 517 |||||||||||| | |||||||||||||| ||| ||||| ||| || |||| || Sbjct: 2774608 cttgaacatgcggctgagctgctccacacattccgcaactagctgctgatggcccataac 2774667 Query: 518 tttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtc 577 |||||| ||||||||||| || ||||| |||||||||||||| || | | |||||||| Sbjct: 2774668 tttgcgactcttcataatgcgcacaatcgatgcatcaattgcataccgcctgtccttgtc 2774727 Query: 578 aacatcttcaacaaccttctttttctcatcaactggaggcagaggtatct 627 ||||||||| |||||||| || || |||||||| ||||| || ||||||| Sbjct: 2774728 aacatcttcgacaacctttttcttttcatcaacaggaggtaggggtatct 2774777 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 399 tccaggtaatccctggttataagatcctcaatgcgcttctttattgctttgaagtcaggc 458 |||||||||||||| || || || ||||| || |||||||| || ||||||||||||||| Sbjct: 2774260 tccaggtaatcccttgtgatgaggtcctcgattcgcttcttgatggctttgaagtcaggc 2774319 Query: 459 t 459 | Sbjct: 2774320 t 2774320 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 626 cttaattctcctcatcttgtcagtaaattttgaattaaattcaaatacatc 676 ||||||||| |||||| ||||||| ||||||||||| || ||||| ||||| Sbjct: 2774872 cttaattcttctcatcctgtcagtgaattttgaattgaactcaaaaacatc 2774922
>emb|AJ344533.1|NTA344533 Nicotiana tabacum mRNA for cullin 1A (cul1A gene) Length = 2693 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 381 gggttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttcttt 440 |||||||| |||||||| |||| ||| |||| ||| |||||||| ||||| ||||| || Sbjct: 2342 gggttctctttgtccctttccaagtagtcccgggtgataagatcttcaatccgctttttg 2283 Query: 441 attgctttgaagtcaggcttgaacatgcg 469 ||||||||||| |||||||| |||||||| Sbjct: 2282 attgctttgaaatcaggcttaaacatgcg 2254 Score = 50.1 bits (25), Expect = 0.010 Identities = 118/149 (79%) Strand = Plus / Minus Query: 522 cggctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaaca 581 ||||||||||| || || ||||| | ||||||||||| || | || |||||||||||| Sbjct: 2201 cggctcttcattatgcgcacaatacaagcatcaattgcataacgtctgtccttgtcaaca 2142 Query: 582 tcttcaacaaccttctttttctcatcaactggaggcagaggtatcttaattctcctcatc 641 || || || || || || | ||||| || ||||||| ||| ||| |||| |||||||| Sbjct: 2141 tcctcgaccacttttttcctttcatctacaggaggcaaagggatcctaatcctcctcatt 2082 Query: 642 ttgtcagtaaattttgaattaaattcaaa 670 |||||||||| || || || |||||||| Sbjct: 2081 ctgtcagtaaacttggagttgaattcaaa 2053
>emb|AJ344534.1|NTA344534 Nicotiana tabacum mRNA for cullin 1B (cul1B gene) Length = 2758 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 377 gttcgggttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgctt 436 |||||||||||| ||||| || |||| |||||||| || |||||||| ||||| ||||| Sbjct: 2433 gttcgggttctctttgtctctttccaagtaatcccgagtgataagatcttcaattcgctt 2374 Query: 437 ctttattgctttgaagtcaggcttgaacatgcgaccaagctgctccacacactcca 492 || ||||||||||| |||||||| ||||| || | | |||||| |||||||||| Sbjct: 2373 tttgattgctttgaaatcaggcttaaacattcggctcaactgctcaacacactcca 2318
>gb|AC146552.16| Medicago truncatula clone mth2-9d1, complete sequence Length = 113088 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 510 cccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtatcttcga 569 ||||| ||||| || ||||||||||| || |||||||| |||||||| || ||||||| Sbjct: 78799 cccaaaactttccgactcttcataatgcgtacaattgaggcatcaatggcatatcttctg 78858 Query: 570 tccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggtatct 627 |||||||||||||| |||| || || || |||||||| || ||||| ||||| |||| Sbjct: 78859 tccttgtcaacatcctcaattacttttttcttctcatccacaggaggtagaggaatct 78916 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Plus Query: 633 ctcctcatcttgtcagtaaattttgaattaaattcaaa 670 |||||||| |||||||| || |||| |||||||||||| Sbjct: 79039 ctcctcattttgtcagtgaactttgcattaaattcaaa 79076
>ref|NM_100179.2| Arabidopsis thaliana CUL2 AT1G02980 (CUL2) mRNA, complete cds Length = 2229 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 525 ctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaacatct 584 |||||||| || ||||||| | |||||||||||| || | || ||| || ||||||||| Sbjct: 2060 ctcttcatgatccgaacaagagctgcatcaattgcatagcgtctatctttatcaacatct 2001 Query: 585 tcaacaaccttctttttctcatcaactggaggcagaggtatcttaattctcctcatctt 643 ||||||| ||||| ||||||| | ||||||||||| | | |||||||||||||||| Sbjct: 2000 tcaacaattttcttcctctcatccatcggaggcagaggcaccctaattctcctcatctt 1942
>gb|BT006231.1| Arabidopsis thaliana At1g02980 gene, complete cds Length = 807 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 525 ctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaacatct 584 |||||||| || ||||||| | |||||||||||| || | || ||| || ||||||||| Sbjct: 638 ctcttcatgatccgaacaagagctgcatcaattgcatagcgtctatctttatcaacatct 579 Query: 585 tcaacaaccttctttttctcatcaactggaggcagaggtatcttaattctcctcatctt 643 ||||||| ||||| ||||||| | ||||||||||| | | |||||||||||||||| Sbjct: 578 tcaacaattttcttcctctcatccatcggaggcagaggcaccctaattctcctcatctt 520
>dbj|AK117909.1| Arabidopsis thaliana At1g02980 mRNA for unknown protein, complete cds, clone: RAFL19-09-D14 Length = 1081 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 525 ctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaacatct 584 |||||||| || ||||||| | |||||||||||| || | || ||| || ||||||||| Sbjct: 814 ctcttcatgatccgaacaagagctgcatcaattgcatagcgtctatctttatcaacatct 755 Query: 585 tcaacaaccttctttttctcatcaactggaggcagaggtatcttaattctcctcatctt 643 ||||||| ||||| ||||||| | ||||||||||| | | |||||||||||||||| Sbjct: 754 tcaacaattttcttcctctcatccatcggaggcagaggcaccctaattctcctcatctt 696
>ref|NM_193824.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2241 Score = 63.9 bits (32), Expect = 6e-07 Identities = 176/224 (78%) Strand = Plus / Minus Query: 447 ttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattactagtgtctgg 506 |||| ||||||||| |||||||| | ||||||||||| || ||| ||| ||| ||| Sbjct: 2150 ttgatgtcaggcttaaacatgcggctgagctgctccacgcattccgctacaagttgctga 2091 Query: 507 tgacccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtatctt 566 || |||| ||||||||||| ||||| || || |||| ||||||||||||||| | || Sbjct: 2090 tggcccagaactttgcggcttttcatgatgcgcacaagagatgcatcaattgcgaacctc 2031 Query: 567 cgatccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggtatc 626 | ||||||| ||||| || |||||||| || |||||||| | | |||| || |||| | Sbjct: 2030 ctgtccttgttgacatcatcgacaacctttttcttctcatcgatttgaggaagtggtacc 1971 Query: 627 ttaattctcctcatcttgtcagtaaattttgaattaaattcaaa 670 ||||| || | |||| | || |||||||| ||||| || ||||| Sbjct: 1970 ttaatccttcgcatcctatcggtaaatttggaattgaactcaaa 1927
>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM, complete sequence Length = 113566 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 384 ttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttatt 443 ||||||||||||||||||| ||||| |||||||| | |||||| || |||||||| || Sbjct: 77687 ttctccttgtccctctccaaataatctctggttattaaatcctccatacgcttcttgatc 77746 Query: 444 gctttgaagtcaggct 459 ||||||| ||||||| Sbjct: 77747 gctttgatatcaggct 77762 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Plus Query: 549 gcatcaattgcgtatcttcgatccttgtcaacatcttcaacaaccttctttttctcatca 608 ||||||||||| ||||||| || || || ||||||||||| || ||||| | |||||| Sbjct: 77941 gcatcaattgcatatcttctgtctttatcgacatcttcaacgactttcttcctttcatca 78000 Query: 609 actggaggcagaggtatct 627 ||||| || ||||| |||| Sbjct: 78001 actgggggaagagggatct 78019
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6 Length = 194892 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 384 ttctccttgtccctctccaggtaatccctggttataagatcctcaatgcgcttctttatt 443 ||||||||||||||||||| ||||| |||||||| | |||||| || |||||||| || Sbjct: 169058 ttctccttgtccctctccaaataatctctggttattaaatcctccatacgcttcttgatc 168999 Query: 444 gctttgaagtcaggct 459 ||||||| ||||||| Sbjct: 168998 gctttgatatcaggct 168983 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 549 gcatcaattgcgtatcttcgatccttgtcaacatcttcaacaaccttctttttctcatca 608 ||||||||||| ||||||| || || || ||||||||||| || ||||| | |||||| Sbjct: 168804 gcatcaattgcatatcttctgtctttatcgacatcttcaacgactttcttcctttcatca 168745 Query: 609 actggaggcagaggtatct 627 ||||| || ||||| |||| Sbjct: 168744 actgggggaagagggatct 168726
>dbj|AK073477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045D14, full insert sequence Length = 2634 Score = 63.9 bits (32), Expect = 6e-07 Identities = 176/224 (78%) Strand = Plus / Minus Query: 447 ttgaagtcaggcttgaacatgcgaccaagctgctccacacactccattactagtgtctgg 506 |||| ||||||||| |||||||| | ||||||||||| || ||| ||| ||| ||| Sbjct: 2258 ttgatgtcaggcttaaacatgcggctgagctgctccacgcattccgctacaagttgctga 2199 Query: 507 tgacccaagactttgcggctcttcataatacgaacaattgatgcatcaattgcgtatctt 566 || |||| ||||||||||| ||||| || || |||| ||||||||||||||| | || Sbjct: 2198 tggcccagaactttgcggcttttcatgatgcgcacaagagatgcatcaattgcgaacctc 2139 Query: 567 cgatccttgtcaacatcttcaacaaccttctttttctcatcaactggaggcagaggtatc 626 | ||||||| ||||| || |||||||| || |||||||| | | |||| || |||| | Sbjct: 2138 ctgtccttgttgacatcatcgacaacctttttcttctcatcgatttgaggaagtggtacc 2079 Query: 627 ttaattctcctcatcttgtcagtaaattttgaattaaattcaaa 670 ||||| || | |||| | || |||||||| ||||| || ||||| Sbjct: 2078 ttaatccttcgcatcctatcggtaaatttggaattgaactcaaa 2035
>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete sequence Length = 100239 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 525 ctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaacatct 584 |||||||| || ||||||| | |||||||||||| || | || ||| || ||||||||| Sbjct: 11519 ctcttcatgatccgaacaagagctgcatcaattgcatagcgtctatctttatcaacatct 11578 Query: 585 tcaacaaccttctttttctcatcaactggaggcagagg 622 ||||||| ||||| ||||||| | ||||||||||| Sbjct: 11579 tcaacaattttcttcctctcatccatcggaggcagagg 11616
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0784G04 Length = 157458 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 355 atcaagccaagtatcggtagacgttcgggttctccttgtccctctccaggtaatccct 412 ||||||||||||||| ||| || || ||||| || || |||||||||| ||||||||| Sbjct: 157393 atcaagccaagtatctgtacacatttgggttgtctttatccctctccaagtaatccct 157450
>ref|NM_113297.2| Arabidopsis thaliana beta-amylase AT3G23920 mRNA, complete cds Length = 2131 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 gatccttgtcaacatcttcaacaacc 593 ||||||||||||| |||||||||||| Sbjct: 790 gatccttgtcaacctcttcaacaacc 765
>gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromosome 1, near 59 cM, complete sequence Length = 129271 Score = 44.1 bits (22), Expect = 0.60 Identities = 76/94 (80%) Strand = Plus / Minus Query: 525 ctcttcataatacgaacaattgatgcatcaattgcgtatcttcgatccttgtcaacatct 584 |||||||| || ||||||| | |||||| ||||| || | || ||| || ||||||||| Sbjct: 7851 ctcttcatgatccgaacaagagctgcatctattgcatagcgtctatctttatcaacatct 7792 Query: 585 tcaacaaccttctttttctcatcaactggaggca 618 ||||| || ||||| ||||||| | |||||||| Sbjct: 7791 tcaactactttcttcctctcatccattggaggca 7758
>gb|AC092191.2| Drosophila melanogaster clone BACR05O07, complete sequence Length = 80919 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 648 gtaaattttgaattaaattcaa 669 |||||||||||||||||||||| Sbjct: 7001 gtaaattttgaattaaattcaa 7022
>gb|AY096517.1| Arabidopsis thaliana putative beta-amylase (At3g23920) mRNA, complete cds Length = 1759 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 gatccttgtcaacatcttcaacaacc 593 ||||||||||||| |||||||||||| Sbjct: 637 gatccttgtcaacctcttcaacaacc 612
>gb|AY074393.1| Arabidopsis thaliana putative beta-amylase (At3g23920) mRNA, complete cds Length = 2081 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 gatccttgtcaacatcttcaacaacc 593 ||||||||||||| |||||||||||| Sbjct: 737 gatccttgtcaacctcttcaacaacc 712
>gb|AY078046.1| Arabidopsis thaliana AT3g23920/F14O13_11 mRNA, complete cds Length = 1728 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 gatccttgtcaacatcttcaacaacc 593 ||||||||||||| |||||||||||| Sbjct: 637 gatccttgtcaacctcttcaacaacc 612
>gb|AF319168.1|AF319168 Brassica napus putative chloroplast-targeted beta-amylase (bmy) mRNA, complete cds Length = 1980 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 gatccttgtcaacatcttcaacaacc 593 ||||||||||||| |||||||||||| Sbjct: 711 gatccttgtcaacctcttcaacaacc 686
>gb|AF367293.1|AF367293 Arabidopsis thaliana AT3g23920/F14O13_11 mRNA, complete cds Length = 1902 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 gatccttgtcaacatcttcaacaacc 593 ||||||||||||| |||||||||||| Sbjct: 737 gatccttgtcaacctcttcaacaacc 712
>emb|BX823311.1|CNS0A4RM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZG02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1875 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 gatccttgtcaacatcttcaacaacc 593 ||||||||||||| |||||||||||| Sbjct: 741 gatccttgtcaacctcttcaacaacc 716
>dbj|AP001297.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F14O13 Length = 106203 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 gatccttgtcaacatcttcaacaacc 593 ||||||||||||| |||||||||||| Sbjct: 45739 gatccttgtcaacctcttcaacaacc 45714
>emb|Z82270.1|CEF53H2 Caenorhabditis elegans Cosmid F53H2, complete sequence Length = 37766 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 650 aaattttgaattaaattcaaat 671 |||||||||||||||||||||| Sbjct: 17405 aaattttgaattaaattcaaat 17384
>gb|AE003573.4| Drosophila melanogaster chromosome X, section 74 of 74 of the complete sequence Length = 313035 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 648 gtaaattttgaattaaattcaa 669 |||||||||||||||||||||| Sbjct: 131696 gtaaattttgaattaaattcaa 131675
>dbj|AP006417.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT05D12, TM0303, complete sequence Length = 123806 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 647 agtaaattttgaattaaattcaaata 672 |||||||||||||| ||||||||||| Sbjct: 94121 agtaaattttgaatgaaattcaaata 94146
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 atagcatccttaaatagcagt 300 ||||||||||||||||||||| Sbjct: 562242 atagcatccttaaatagcagt 562262
>ref|NM_183784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 813 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 caacaaccttctttttctcat 606 ||||||||||||||||||||| Sbjct: 157 caacaaccttctttttctcat 137
>emb|AL450107.11| Human DNA sequence from clone RP11-495K23 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 50886 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 643 tgtcagtaaattttgaattaa 663 ||||||||||||||||||||| Sbjct: 30006 tgtcagtaaattttgaattaa 30026
>gb|AC110719.7| Homo sapiens 3 BAC RP11-709N4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153748 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gcatccttaaatagcagtagc 303 ||||||||||||||||||||| Sbjct: 103017 gcatccttaaatagcagtagc 102997
>gb|AC083790.7| Homo sapiens chromosome 8, clone RP11-46B18, complete sequence Length = 98300 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 655 ttgaattaaattcaaatacat 675 ||||||||||||||||||||| Sbjct: 86919 ttgaattaaattcaaatacat 86899
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 660 ttaaattcaaatacatcatta 680 ||||||||||||||||||||| Sbjct: 83484 ttaaattcaaatacatcatta 83464
>gb|AC104582.3| Homo sapiens chromosome 8, clone RP11-1101K5, complete sequence Length = 186127 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 655 ttgaattaaattcaaatacat 675 ||||||||||||||||||||| Sbjct: 2700 ttgaattaaattcaaatacat 2720
>gb|AC022724.8| Homo sapiens chromosome 18, clone RP11-275K5, complete sequence Length = 163978 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gcatccttaaatagcagtagc 303 ||||||||||||||||||||| Sbjct: 39059 gcatccttaaatagcagtagc 39039
>gb|AC020692.5|AC020692 Homo sapiens chromosome 8, clone RP11-544H16, complete sequence Length = 168242 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 655 ttgaattaaattcaaatacat 675 ||||||||||||||||||||| Sbjct: 120607 ttgaattaaattcaaatacat 120627
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 gcggtgtgcagtgtgccatgg 271 ||||||||||||||||||||| Sbjct: 20912881 gcggtgtgcagtgtgccatgg 20912901
>emb|BX323804.9| Zebrafish DNA sequence from clone DKEY-270K22 in linkage group 2, complete sequence Length = 121116 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 644 gtcagtaaattttgaattaaa 664 ||||||||||||||||||||| Sbjct: 82741 gtcagtaaattttgaattaaa 82721
>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0426D06 Length = 162173 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 caacaaccttctttttctcat 606 ||||||||||||||||||||| Sbjct: 99638 caacaaccttctttttctcat 99658
>gb|AC153877.5| Mus musculus 6 BAC RP23-258E21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232977 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 tgaaccaccagttttacctgg 122 ||||||||||||||||||||| Sbjct: 15794 tgaaccaccagttttacctgg 15774
>gb|AC154011.3| Mus musculus 6 BAC RP24-261O15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 146781 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 tgaaccaccagttttacctgg 122 ||||||||||||||||||||| Sbjct: 119717 tgaaccaccagttttacctgg 119697
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 gcggtgtgcagtgtgccatgg 271 ||||||||||||||||||||| Sbjct: 20839095 gcggtgtgcagtgtgccatgg 20839115
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 gcggtgtgcagtgtgccatgg 271 ||||||||||||||||||||| Sbjct: 46114 gcggtgtgcagtgtgccatgg 46094
>ref|NM_123990.2| Arabidopsis thaliana CUL4 AT5G46210 (CUL4) mRNA, complete cds Length = 2687 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 526 tcttcataatacgaacaattgatgcatc 553 ||||||||||||||||||| | |||||| Sbjct: 2372 tcttcataatacgaacaatggctgcatc 2345
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 649 taaattttgaattaaattcaaata 672 |||||||||| ||||||||||||| Sbjct: 1434449 taaattttgacttaaattcaaata 1434426
>gb|AF203642.1| Myotis myotis microsatellite B8 sequence Length = 438 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 620 aggtatcttaattctcctcatctt 643 |||||| ||||||||||||||||| Sbjct: 26 aggtattttaattctcctcatctt 3
>gb|AC107698.8| Mus musculus chromosome 1, clone RP24-496A5, complete sequence Length = 159888 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tccaggtaatccctggttat 418 |||||||||||||||||||| Sbjct: 149404 tccaggtaatccctggttat 149423
>gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence Length = 314335 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tcatcaactggaggcagagg 622 |||||||||||||||||||| Sbjct: 254274 tcatcaactggaggcagagg 254293
>gb|AC117258.2| Mus musculus BAC clone RP24-491P21 from X, complete sequence Length = 161458 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 647 agtaaattttgaattaaatt 666 |||||||||||||||||||| Sbjct: 122055 agtaaattttgaattaaatt 122036
>gb|AY091113.1| Arabidopsis thaliana putative cullin (At5g46210) mRNA, complete cds Length = 2678 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 526 tcttcataatacgaacaattgatgcatc 553 ||||||||||||||||||| | |||||| Sbjct: 2372 tcttcataatacgaacaatggctgcatc 2345
>gb|AF274858.3| Homo sapiens chromosome X clone RP11-54I20, RP11-66N11 map q28, complete sequence Length = 191983 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctccttgtccctctccaggt 405 |||||||||||||||||||| Sbjct: 130886 ctccttgtccctctccaggt 130905
>ref|NM_001011142.1| Xenopus tropicalis UDP-N-acetylglucosamine pyrophosphorylase 1 (uap1), mRNA Length = 2077 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 gctgctccacacactccatt 494 |||||||||||||||||||| Sbjct: 1416 gctgctccacacactccatt 1397
>emb|AJ318018.1|ATH318018 Arabidopsis thaliana mRNA for cullin 4 (cul4 gene) Length = 2547 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 526 tcttcataatacgaacaattgatgcatc 553 ||||||||||||||||||| | |||||| Sbjct: 2236 tcttcataatacgaacaatggctgcatc 2209
>gb|AC105749.2| Homo sapiens chromosome 3 clone RP11-640L9, complete sequence Length = 200450 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 ggtgtgcagtgtgccatggcacaa 276 |||||||||||||||||| ||||| Sbjct: 122954 ggtgtgcagtgtgccatgccacaa 122931
>gb|AC097360.2| Homo sapiens chromosome 3 clone RP11-344C13, complete sequence Length = 166349 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 ggtgtgcagtgtgccatggcacaa 276 |||||||||||||||||| ||||| Sbjct: 65367 ggtgtgcagtgtgccatgccacaa 65344
>gb|AE004731.1| Pseudomonas aeruginosa PAO1, section 292 of 529 of the complete genome Length = 18765 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 cgacagcggcaccagggtat 232 |||||||||||||||||||| Sbjct: 12612 cgacagcggcaccagggtat 12593
>gb|AY084267.1| Arabidopsis thaliana clone 101723 mRNA, complete sequence Length = 2518 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 526 tcttcataatacgaacaattgatgcatc 553 ||||||||||||||||||| | |||||| Sbjct: 2236 tcttcataatacgaacaatggctgcatc 2209
>gb|AC117792.6| Mus musculus chromosome 8, clone RP24-549A13, complete sequence Length = 174210 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tacctgggcagttctaccat 135 |||||||||||||||||||| Sbjct: 100742 tacctgggcagttctaccat 100761
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cctggttataagatcctcaa 429 |||||||||||||||||||| Sbjct: 159160 cctggttataagatcctcaa 159141
>dbj|AB025620.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDE13 Length = 14139 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 tcttcataatacgaacaattgatgcatc 553 ||||||||||||||||||| | |||||| Sbjct: 5090 tcttcataatacgaacaatggctgcatc 5117
>emb|CR848106.2| Xenopus tropicalis finished cDNA, clone TGas117b20 Length = 2026 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 gctgctccacacactccatt 494 |||||||||||||||||||| Sbjct: 1412 gctgctccacacactccatt 1393
>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence Length = 178509 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 tccaggtaatccctggttat 418 |||||||||||||||||||| Sbjct: 175101 tccaggtaatccctggttat 175082
>gb|BC084497.1| Xenopus tropicalis UDP-N-acetylglucosamine pyrophosphorylase 1, mRNA (cDNA clone MGC:89532 IMAGE:6993149), complete cds Length = 2077 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 gctgctccacacactccatt 494 |||||||||||||||||||| Sbjct: 1416 gctgctccacacactccatt 1397
>emb|AL663068.12| Mouse DNA sequence from clone RP23-30J5 on chromosome X, complete sequence Length = 225435 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 tgtcaacatcttcaacaaccttct 597 |||||| ||||||||||||||||| Sbjct: 218335 tgtcaaaatcttcaacaaccttct 218312 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,699,710 Number of Sequences: 3902068 Number of extensions: 6699710 Number of successful extensions: 138039 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137598 Number of HSP's gapped (non-prelim): 432 length of query: 683 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 660 effective length of database: 17,143,297,704 effective search space: 11314576484640 effective search space used: 11314576484640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)