>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 67.9 bits (34), Expect = 5e-09
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                                 
Query: 33      aaagctcatttctttctcccaccacgctccctca 66
               ||||||||||||||||||||||||||||||||||
Sbjct: 8198655 aaagctcatttctttctcccaccacgctccctca 8198622

>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1134_F06
          Length = 130968

 Score = 67.9 bits (34), Expect = 5e-09
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                               
Query: 33    aaagctcatttctttctcccaccacgctccctca 66
             ||||||||||||||||||||||||||||||||||
Sbjct: 30801 aaagctcatttctttctcccaccacgctccctca 30768

>dbj|AK119770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F01, full
            insert sequence
          Length = 2370

 Score = 67.9 bits (34), Expect = 5e-09
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                              
Query: 33   aaagctcatttctttctcccaccacgctccctca 66
            ||||||||||||||||||||||||||||||||||
Sbjct: 2208 aaagctcatttctttctcccaccacgctccctca 2175

>dbj|AK119874.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-E06, full
            insert sequence
          Length = 2578

 Score = 67.9 bits (34), Expect = 5e-09
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                              
Query: 33   aaagctcatttctttctcccaccacgctccctca 66
            ||||||||||||||||||||||||||||||||||
Sbjct: 2408 aaagctcatttctttctcccaccacgctccctca 2375

>gb|AY105256.1| Zea mays PCO065087 mRNA sequence
          Length = 613

 Score = 56.0 bits (28), Expect = 2e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 37  ctcatttctttctcccaccacgctccct 64
           ||||||||||||||||||||||||||||
Sbjct: 608 ctcatttctttctcccaccacgctccct 581

>emb|AL023775.1|HS497J21 Human DNA sequence from clone RP3-497J21 on chromosome 6q26-27
            Contains part of a variant of the RPS6KA2 gene for
            ribosomal protein S6 kinase, 90kD, polypeptide 2 (RSK3)
            and a IGF-II mRNA-binding protein 3 (KOC1) pseudogene,
            complete sequence
          Length = 129432

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 35   agctcatttctttctcccaccac 57
            |||||||||||||||||||||||
Sbjct: 7362 agctcatttctttctcccaccac 7384

>gb|AF019664.1|AF019664 Homo sapiens cosmids 52b3, 189g5, ICRFc109N244QD2, P1 255h6, and PAC
             pDJ84g15 from chromosome 6q27 encompassing markers D6S193
             and D6S297, complete sequence
          Length = 68940

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 35    agctcatttctttctcccaccac 57
             |||||||||||||||||||||||
Sbjct: 12388 agctcatttctttctcccaccac 12366

>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete
             sequence
          Length = 192473

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    catttctttctcccaccacgc 59
             |||||||||||||||||||||
Sbjct: 20305 catttctttctcccaccacgc 20285

>gb|DQ397875.1| Cenarchaeum symbiosum clone C07F02, complete sequence
          Length = 41724

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 36   gctcatttctttctcccaccacgct 60
            ||||| |||||||||||||||||||
Sbjct: 5341 gctcagttctttctcccaccacgct 5317

>ref|NM_101332.3| Arabidopsis thaliana RNA binding AT1G14650 mRNA, complete cds
          Length = 2789

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 43   tctttctcccaccacgctccctca 66
            |||||||||||||||| |||||||
Sbjct: 2512 tctttctcccaccacgttccctca 2489

>ref|XM_677012.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8835.2), mRNA
          Length = 3930

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   tttctttctcccaccacgct 60
            ||||||||||||||||||||
Sbjct: 2635 tttctttctcccaccacgct 2654

>gb|AC018664.11| Homo sapiens chromosome 7 clone RP11-109E9, complete sequence
          Length = 114848

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ctcatttctttctcccacca 56
             ||||||||||||||||||||
Sbjct: 29044 ctcatttctttctcccacca 29025

>gb|AY081293.1| Arabidopsis thaliana splicing factor, putative (At1g14650) mRNA,
            complete cds
          Length = 2740

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 43   tctttctcccaccacgctccctca 66
            |||||||||||||||| |||||||
Sbjct: 2477 tctttctcccaccacgttccctca 2454

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 42      ttctttctcccaccacgctc 61
               ||||||||||||||||||||
Sbjct: 3605106 ttctttctcccaccacgctc 3605125

>gb|AC010657.3|AC010657 Genomic sequence for Arabidopsis thaliana BAC T5E21 from chromosome I,
             complete sequence
          Length = 83351

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 43    tctttctcccaccacgctccctca 66
             |||||||||||||||| |||||||
Sbjct: 67987 tctttctcccaccacgttccctca 67964

>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1641_C04
          Length = 134367

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    ttctttctcccaccacgctc 61
             ||||||||||||||||||||
Sbjct: 74423 ttctttctcccaccacgctc 74442

>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0039H02
          Length = 169162

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     ttctttctcccaccacgctc 61
              ||||||||||||||||||||
Sbjct: 143056 ttctttctcccaccacgctc 143075

>gb|AC124503.2| Mus musculus BAC clone RP23-417F2 from chromosome 10, complete sequence
          Length = 206343

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    aaaagctcatttctttctc 50
             |||||||||||||||||||
Sbjct: 56473 aaaagctcatttctttctc 56491

>gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complete sequence
          Length = 180155

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    aagaaaagctcatttcttt 47
             |||||||||||||||||||
Sbjct: 56564 aagaaaagctcatttcttt 56546

>emb|CR715591.2|CNS0GF3N Tetraodon nigroviridis full-length cDNA
          Length = 1467

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 37   ctcatttctttctcccacc 55
            |||||||||||||||||||
Sbjct: 1243 ctcatttctttctcccacc 1261

>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence
          Length = 107448

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 36    gctcatttctttctcccaccacgctccctca 66
             |||||| ||||||| ||||||||||| ||||
Sbjct: 26504 gctcatctctttctaccaccacgctctctca 26534

>emb|BX957247.4| Zebrafish DNA sequence from clone DKEYP-117H10 in linkage group 23,
              complete sequence
          Length = 166306

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 21     actgagataagaaaagctcatttcttt 47
              ||||| ||||||||| |||||||||||
Sbjct: 150990 actgaaataagaaaacctcatttcttt 150964

>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence
          Length = 99712

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 36    gctcatttctttctcccaccacgctccctca 66
             |||||| ||||||| ||||||||||| ||||
Sbjct: 16021 gctcatctctttctaccaccacgctctctca 16051

>dbj|AK149982.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:G530112E22 product:unclassifiable, full
            insert sequence
          Length = 5140

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 25   agataagaaaagctcattt 43
            |||||||||||||||||||
Sbjct: 4974 agataagaaaagctcattt 4956

>emb|BX322612.8| Zebrafish DNA sequence from clone RP71-80O10 in linkage group 23,
             complete sequence
          Length = 158403

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    agataagaaaagctcattt 43
             |||||||||||||||||||
Sbjct: 18103 agataagaaaagctcattt 18121

>dbj|AK047075.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930016N07 product:inferred:
            mab-21-like 1 (C. elegans) / cell fate-determining
            protein homolog {Homo sapiens}, full insert sequence
          Length = 2824

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 29   aagaaaagctcatttcttt 47
            |||||||||||||||||||
Sbjct: 1160 aagaaaagctcatttcttt 1142

>gb|AC157591.2| Mus musculus BAC clone RP23-311C13 from chromosome 9, complete sequence
          Length = 213461

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     agataagaaaagctcattt 43
              |||||||||||||||||||
Sbjct: 208591 agataagaaaagctcattt 208609

>dbj|AK035928.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630018K02 product:mab-21-like 1
            (C. elegans), full insert sequence
          Length = 3861

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 29   aagaaaagctcatttcttt 47
            |||||||||||||||||||
Sbjct: 2099 aagaaaagctcatttcttt 2081

>dbj|AK029239.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
            library, clone:4831436L24 product:neurobeachin, full
            insert sequence
          Length = 4514

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 29   aagaaaagctcatttcttt 47
            |||||||||||||||||||
Sbjct: 2047 aagaaaagctcatttcttt 2029

>emb|BX323804.9| Zebrafish DNA sequence from clone DKEY-270K22 in linkage group 2,
             complete sequence
          Length = 121116

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    agaaaagctcatttctttc 48
             |||||||||||||||||||
Sbjct: 81708 agaaaagctcatttctttc 81726

>gb|AC097372.3| Homo sapiens BAC clone RP11-6L6 from 4, complete sequence
          Length = 163823

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     aagaaaagctcatttcttt 47
              |||||||||||||||||||
Sbjct: 134309 aagaaaagctcatttcttt 134291

>emb|CT010507.11| Mouse DNA sequence from clone RP23-259G10 on chromosome 9, complete
              sequence
          Length = 213433

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     agataagaaaagctcattt 43
              |||||||||||||||||||
Sbjct: 118401 agataagaaaagctcattt 118419

>gb|AC087541.23| Mus musculus strain C57BL/6J chromosome 16 clone rp23-230d17, complete
              sequence
          Length = 204316

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     agaaaagctcatttctttc 48
              |||||||||||||||||||
Sbjct: 123893 agaaaagctcatttctttc 123911

>emb|AL928728.9| Zebrafish DNA sequence from clone CH211-212E24, complete sequence
          Length = 206513

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 21     actgagataagaaaagctcatttcttt 47
              ||||| ||||||||| |||||||||||
Sbjct: 186300 actgaaataagaaaacctcatttcttt 186274


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 767,819
Number of Sequences: 3902068
Number of extensions: 767819
Number of successful extensions: 53186
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53116
Number of HSP's gapped (non-prelim): 70
length of query: 102
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 81
effective length of database: 17,151,101,840
effective search space: 1389239249040
effective search space used: 1389239249040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)