ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21d17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111198.1| Zea mays CL35705_1 mRNA sequence 76 2e-10
2gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome... 74 7e-10
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
4dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
5dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
6gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome... 44 0.60
7gb|AC132370.9| Mus musculus BAC clone RP23-471F3 from chromosome... 44 0.60
8gb|AC153572.13| Mus musculus 10 BAC RP23-187O15 (Roswell Park Ca... 42 2.4
9ref|XM_728389.1| Plasmodium chabaudi chabaudi helicase (PC300957... 42 2.4
10ref|XM_738663.1| Plasmodium chabaudi chabaudi RNA helicase-1 (PC... 42 2.4
11gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete s... 42 2.4
12gb|AC159325.13| Mus musculus 10 BAC RP23-382A21 (Roswell Park Ca... 42 2.4
13gb|BC025295.1| Homo sapiens sorbitol dehydrogenase, mRNA (cDNA c... 40 9.4
14gb|BC021085.2| Homo sapiens sorbitol dehydrogenase, mRNA (cDNA c... 40 9.4
15gb|AC146504.2| Danio rerio clone CH211-86L16, complete sequence 40 9.4
16emb|CT009583.3| Pan troglodytes chromosome X BAC RP43-045P06, co... 40 9.4
17gb|AC066590.5| Homo sapiens chromosome 3 clone RP11-324K11 map 3... 40 9.4
18gb|AC124460.5| Mus musculus BAC clone RP24-142P7 from chromosome... 40 9.4
19emb|CR954286.2|RP43001A02 Pan troglodytes chromosome X BAC RP43-... 40 9.4
20gb|AC087828.6| Homo sapiens chromosome 15, clone RP11-292P13, co... 40 9.4
21emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 9.4
22emb|AJ418041.1|PPA418041 Physcomitrella patens mRNA for 20S prot... 40 9.4
23gb|AC122108.2| Homo sapiens chromosome 15 clone CTD-2008A1 map 1... 40 9.4
24gb|AC120778.2| Homo sapiens chromosome 15 clone CTD-2163N2 map 1... 40 9.4
25emb|CR524481.5| Zebrafish DNA sequence from clone CH211-81C11 in... 40 9.4
26emb|CR616486.1| full-length cDNA clone CS0DM007YB23 of Fetal liv... 40 9.4
27gb|AC010650.9| Homo sapiens chromosome 16 clone RP11-281J9, comp... 40 9.4
28emb|CR601547.1| full-length cDNA clone CS0DC016YN19 of Neuroblas... 40 9.4
29gb|AC117838.1| Caenorhabditis briggsae cosmid CB005E21, complete... 40 9.4
30gb|AC022539.13| Homo sapiens chromosome 10 clone RP11-456A18, co... 40 9.4
31gb|AC079864.22| Homo sapiens Xp BAC RP11-662G16 (Roswell Park Ca... 40 9.4
32ref|NM_003104.3| Homo sapiens sorbitol dehydrogenase (SORD), mRNA 40 9.4
33gb|AC091117.5| Homo sapiens chromosome 15 clone RP11-109D20 map ... 40 9.4
34gb|AC091245.2| Homo sapiens chromosome 15 clone RP11-456H13 map ... 40 9.4
35gb|AC018901.8| Homo sapiens chromosome 15 clone RP11-292P13 map ... 40 9.4
36gb|AC092134.4| Homo sapiens chromosome 16 clone RP11-264M12, com... 40 9.4
37gb|AC074090.7| Homo sapiens BAC clone RP11-132H23 from 2, comple... 40 9.4
38gb|U67252.1|HSPSORD7 Homo sapiens sorbitol dehydrogenase (SORD) ... 40 9.4
39gb|AC142263.3| Mus musculus BAC clone RP24-449M10 from 12, compl... 40 9.4
40gb|U67243.1|HSSORD08 Homo sapiens sorbitol dehydrogenase (SORD) ... 40 9.4
41gb|L29254.1|HUMLI2D06 Human (clone D21-1) L-iditol-2 dehydrogena... 40 9.4
42gb|L29008.1|HUMLI2D Human L-iditol-2 dehydrogenase mRNA, complet... 40 9.4
43gb|U05000.1|CBU05000 Caenorhabditis briggsae CbMyoD (Cbhlh-1) ge... 40 9.4
44gb|U07361.1|HSU07361 Homo sapiens sorbitol dehydrogenase gene, c... 40 9.4
45gb|AC087857.3| Homo sapiens chromosome 3 clone RP11-149E15 map 3... 40 9.4 
>gb|AY111198.1| Zea mays CL35705_1 mRNA sequence
          Length = 989

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 89/106 (83%)
 Strand = Plus / Plus

                                                                       
Query: 576 ccagtcatcaccttccgctagaaccctcagtttatgaatacctccattccatacagaaac 635
           |||||| |||||||| |||| || ||| |||||||||| ||  ||||||||| ||||| |
Sbjct: 358 ccagtcttcaccttctgctaaaagccttagtttatgaaaactcccattccatgcagaagc 417

                                                         
Query: 636 catgcacatgattggattcctcaatgttgagtctgatacttcaaaa 681
           ||  ||||| | || ||||||||||| ||||| |||||||||||||
Sbjct: 418 cacacacataagtgaattcctcaatgctgagtgtgatacttcaaaa 463



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 435 gtcaatctcatcctcacattgttcgtagacaatgaagacaatgaacaaggatgc 488
           |||||| || ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 217 gtcaatttcttcctcgcattgttcatagacaatgaagacaatgaacaaggatgc 270
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>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0028C22, complete sequence
          Length = 154228

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                          
Query: 576    ccagtcatcaccttccgctagaaccctcagtttatgaatacctccattccatacagaaac 635
              ||||||||| ||||| |||| |||||||| ||||| ||| ||||||||||||| |||| |
Sbjct: 150948 ccagtcatcgccttctgctaaaaccctcaatttataaatgcctccattccatatagaagc 151007

                                                                   
Query: 636    catgcacatgattggattcctcaatgttgagtctgatacttcaaaacaatcag 688
              ||| ||||  | || |||| ||||||||   | ||||||||||||| ||||||
Sbjct: 151008 catccacacaagtgtattcttcaatgtttcttgtgatacttcaaaataatcag 151060



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                          
Query: 392    ccactagggatttgattttgacagatgccatagctactaaagcgtcaatctcatcctcac 451
              ||||||||||||||| |||||| || || | ||||||||||  ||| || || ||||| |
Sbjct: 150139 ccactagggatttgactttgacggaagcaaaagctactaaactgtctatttcctcctcgc 150198

                                            
Query: 452    attgttcgtagacaatgaagacaatgaaca 481
              |||| || ||||||||||| |||| |||||
Sbjct: 150199 attgctcatagacaatgaaaacaacgaaca 150228
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                            
Query: 576      ccagtcatcaccttccgctagaaccctcagtttatgaatacctccattccatacagaaac 635
                ||||||||| ||||| |||| |||||||| ||||| ||| ||||||||||||| |||| |
Sbjct: 19823681 ccagtcatcgccttctgctaaaaccctcaatttataaatgcctccattccatatagaagc 19823740

                                                                     
Query: 636      catgcacatgattggattcctcaatgttgagtctgatacttcaaaacaatcag 688
                ||| ||||  | || |||| ||||||||   | ||||||||||||| ||||||
Sbjct: 19823741 catccacacaagtgtattcttcaatgtttcttgtgatacttcaaaataatcag 19823793



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                            
Query: 392      ccactagggatttgattttgacagatgccatagctactaaagcgtcaatctcatcctcac 451
                ||||||||||||||| |||||| || || | ||||||||||  ||| || || ||||| |
Sbjct: 19822872 ccactagggatttgactttgacggaagcaaaagctactaaactgtctatttcctcctcgc 19822931

                                              
Query: 452      attgttcgtagacaatgaagacaatgaaca 481
                |||| || ||||||||||| |||| |||||
Sbjct: 19822932 attgctcatagacaatgaaaacaacgaaca 19822961
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>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                         
Query: 576   ccagtcatcaccttccgctagaaccctcagtttatgaatacctccattccatacagaaac 635
             ||||||||| ||||| |||| |||||||| ||||| ||| ||||||||||||| |||| |
Sbjct: 48121 ccagtcatcgccttctgctaaaaccctcaatttataaatgcctccattccatatagaagc 48180

                                                                  
Query: 636   catgcacatgattggattcctcaatgttgagtctgatacttcaaaacaatcag 688
             ||| ||||  | || |||| ||||||||   | ||||||||||||| ||||||
Sbjct: 48181 catccacacaagtgtattcttcaatgtttcttgtgatacttcaaaataatcag 48233



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                         
Query: 392   ccactagggatttgattttgacagatgccatagctactaaagcgtcaatctcatcctcac 451
             ||||||||||||||| |||||| || || | ||||||||||  ||| || || ||||| |
Sbjct: 47312 ccactagggatttgactttgacggaagcaaaagctactaaactgtctatttcctcctcgc 47371

                                           
Query: 452   attgttcgtagacaatgaagacaatgaaca 481
             |||| || ||||||||||| |||| |||||
Sbjct: 47372 attgctcatagacaatgaaaacaacgaaca 47401
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>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0450E05
          Length = 176553

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                          
Query: 576    ccagtcatcaccttccgctagaaccctcagtttatgaatacctccattccatacagaaac 635
              ||||||||| ||||| |||| |||||||| ||||| ||| ||||||||||||| |||| |
Sbjct: 169367 ccagtcatcgccttctgctaaaaccctcaatttataaatgcctccattccatatagaagc 169426

                                                                   
Query: 636    catgcacatgattggattcctcaatgttgagtctgatacttcaaaacaatcag 688
              ||| ||||  | || |||| ||||||||   | ||||||||||||| ||||||
Sbjct: 169427 catccacacaagtgtattcttcaatgtttcttgtgatacttcaaaataatcag 169479



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                          
Query: 392    ccactagggatttgattttgacagatgccatagctactaaagcgtcaatctcatcctcac 451
              ||||||||||||||| |||||| || || | ||||||||||  ||| || || ||||| |
Sbjct: 168558 ccactagggatttgactttgacggaagcaaaagctactaaactgtctatttcctcctcgc 168617

                                            
Query: 452    attgttcgtagacaatgaagacaatgaaca 481
              |||| || ||||||||||| |||| |||||
Sbjct: 168618 attgctcatagacaatgaaaacaacgaaca 168647
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>gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome 14, complete sequence
          Length = 208443

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 114    ttgaatgaaaacgttagataca 135
              ||||||||||||||||||||||
Sbjct: 190606 ttgaatgaaaacgttagataca 190627
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>gb|AC132370.9| Mus musculus BAC clone RP23-471F3 from chromosome 14, complete sequence
          Length = 169022

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 114    ttgaatgaaaacgttagataca 135
              ||||||||||||||||||||||
Sbjct: 145560 ttgaatgaaaacgttagataca 145539
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>gb|AC153572.13| Mus musculus 10 BAC RP23-187O15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 210950

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 481   aaggatgctagcgcaagacca 501
             |||||||||||||||||||||
Sbjct: 27447 aaggatgctagcgcaagacca 27427
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>ref|XM_728389.1| Plasmodium chabaudi chabaudi helicase (PC300957.00.0) partial mRNA
          Length = 615

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 465 aatgaagacaatgaacaagga 485
           |||||||||||||||||||||
Sbjct: 109 aatgaagacaatgaacaagga 129
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>ref|XM_738663.1| Plasmodium chabaudi chabaudi RNA helicase-1 (PC000883.01.0) partial
           mRNA
          Length = 1902

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 465 aatgaagacaatgaacaagga 485
           |||||||||||||||||||||
Sbjct: 121 aatgaagacaatgaacaagga 141
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>gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete sequence
          Length = 113373

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   agatacacactacacacattg 149
             |||||||||||||||||||||
Sbjct: 25658 agatacacactacacacattg 25638
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>gb|AC159325.13| Mus musculus 10 BAC RP23-382A21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 201815

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 481   aaggatgctagcgcaagacca 501
             |||||||||||||||||||||
Sbjct: 54374 aaggatgctagcgcaagacca 54394
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>gb|BC025295.1| Homo sapiens sorbitol dehydrogenase, mRNA (cDNA clone MGC:39247
            IMAGE:5428022), complete cds
          Length = 2487

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 506  gcgttctaaactggaagtgc 525
            ||||||||||||||||||||
Sbjct: 1631 gcgttctaaactggaagtgc 1612
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>gb|BC021085.2| Homo sapiens sorbitol dehydrogenase, mRNA (cDNA clone MGC:1612
            IMAGE:2989137), complete cds
          Length = 2628

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 506  gcgttctaaactggaagtgc 525
            ||||||||||||||||||||
Sbjct: 1683 gcgttctaaactggaagtgc 1664
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>gb|AC146504.2| Danio rerio clone CH211-86L16, complete sequence
          Length = 181948

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 604    agtttatgaatacctccatt 623
              ||||||||||||||||||||
Sbjct: 126342 agtttatgaatacctccatt 126323
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>emb|CT009583.3| Pan troglodytes chromosome X BAC RP43-045P06, complete sequence
          Length = 175371

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     acaactaagcagggagatgg 108
              ||||||||||||||||||||
Sbjct: 157942 acaactaagcagggagatgg 157961
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>gb|AC066590.5| Homo sapiens chromosome 3 clone RP11-324K11 map 3p, complete sequence
          Length = 185895

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 667   tctgatacttcaaaacaatc 686
             ||||||||||||||||||||
Sbjct: 86936 tctgatacttcaaaacaatc 86917
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>gb|AC124460.5| Mus musculus BAC clone RP24-142P7 from chromosome 13, complete sequence
          Length = 184155

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     aagcagggagatggagttct 114
              ||||||||||||||||||||
Sbjct: 137548 aagcagggagatggagttct 137529
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>emb|CR954286.2|RP43001A02 Pan troglodytes chromosome X BAC RP43-001A02, complete sequence
          Length = 186572

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     acaactaagcagggagatgg 108
              ||||||||||||||||||||
Sbjct: 140050 acaactaagcagggagatgg 140031
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>gb|AC087828.6| Homo sapiens chromosome 15, clone RP11-292P13, complete sequence
          Length = 185324

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    gcgttctaaactggaagtgc 525
              ||||||||||||||||||||
Sbjct: 136745 gcgttctaaactggaagtgc 136764
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>emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              5/8
          Length = 348408

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 273    gagcatgctgcagcccacaaagcg 296
              ||||| ||||||||||||||||||
Sbjct: 183713 gagcaagctgcagcccacaaagcg 183690
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>emb|AJ418041.1|PPA418041 Physcomitrella patens mRNA for 20S proteasome subunit alpha V (zeta
           gene)
          Length = 952

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 143 cacattgccaaaatgttcca 162
           ||||||||||||||||||||
Sbjct: 570 cacattgccaaaatgttcca 551
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>gb|AC122108.2| Homo sapiens chromosome 15 clone CTD-2008A1 map 15q21.1, complete
              sequence
          Length = 141944

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    gcgttctaaactggaagtgc 525
              ||||||||||||||||||||
Sbjct: 119476 gcgttctaaactggaagtgc 119495
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>gb|AC120778.2| Homo sapiens chromosome 15 clone CTD-2163N2 map 15q21.1, complete
             sequence
          Length = 113282

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 506   gcgttctaaactggaagtgc 525
             ||||||||||||||||||||
Sbjct: 26808 gcgttctaaactggaagtgc 26827
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>emb|CR524481.5| Zebrafish DNA sequence from clone CH211-81C11 in linkage group 22,
              complete sequence
          Length = 191642

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 604    agtttatgaatacctccatt 623
              ||||||||||||||||||||
Sbjct: 126280 agtttatgaatacctccatt 126261
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>emb|CR616486.1| full-length cDNA clone CS0DM007YB23 of Fetal liver of Homo sapiens
           (human)
          Length = 1038

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 506 gcgttctaaactggaagtgc 525
           ||||||||||||||||||||
Sbjct: 206 gcgttctaaactggaagtgc 187
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>gb|AC010650.9| Homo sapiens chromosome 16 clone RP11-281J9, complete sequence
          Length = 172334

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     ttaagtactgagtaaggagc 87
              ||||||||||||||||||||
Sbjct: 158649 ttaagtactgagtaaggagc 158668
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>emb|CR601547.1| full-length cDNA clone CS0DC016YN19 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1689

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 506  gcgttctaaactggaagtgc 525
            ||||||||||||||||||||
Sbjct: 1650 gcgttctaaactggaagtgc 1631
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>gb|AC117838.1| Caenorhabditis briggsae cosmid CB005E21, complete sequence
          Length = 109299

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   gttctctaaccactctctcc 393
             ||||||||||||||||||||
Sbjct: 56375 gttctctaaccactctctcc 56356
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>gb|AC022539.13| Homo sapiens chromosome 10 clone RP11-456A18, complete sequence
          Length = 96512

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   acattatctgtaaaatataa 333
             ||||||||||||||||||||
Sbjct: 35232 acattatctgtaaaatataa 35213
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>gb|AC079864.22| Homo sapiens Xp BAC RP11-662G16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161874

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    acaactaagcagggagatgg 108
             ||||||||||||||||||||
Sbjct: 84435 acaactaagcagggagatgg 84416
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>ref|NM_003104.3| Homo sapiens sorbitol dehydrogenase (SORD), mRNA
          Length = 2628

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 506  gcgttctaaactggaagtgc 525
            ||||||||||||||||||||
Sbjct: 1683 gcgttctaaactggaagtgc 1664
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>gb|AC091117.5| Homo sapiens chromosome 15 clone RP11-109D20 map 15q15, complete sequence
          Length = 181312

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 506    gcgttctaaactggaagtgc 525
              ||||||||||||||||||||
Sbjct: 124677 gcgttctaaactggaagtgc 124658
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>gb|AC091245.2| Homo sapiens chromosome 15 clone RP11-456H13 map 15q15, complete
             sequence
          Length = 194311

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 506   gcgttctaaactggaagtgc 525
             ||||||||||||||||||||
Sbjct: 91582 gcgttctaaactggaagtgc 91601
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>gb|AC018901.8| Homo sapiens chromosome 15 clone RP11-292P13 map 15q15, complete sequence
          Length = 199503

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    gcgttctaaactggaagtgc 525
              ||||||||||||||||||||
Sbjct: 150897 gcgttctaaactggaagtgc 150916
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>gb|AC092134.4| Homo sapiens chromosome 16 clone RP11-264M12, complete sequence
          Length = 159925

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 68 ttaagtactgagtaaggagc 87
          ||||||||||||||||||||
Sbjct: 43 ttaagtactgagtaaggagc 62
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>gb|AC074090.7| Homo sapiens BAC clone RP11-132H23 from 2, complete sequence
          Length = 130369

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    atgaagacaatgaacaagga 485
              ||||||||||||||||||||
Sbjct: 117107 atgaagacaatgaacaagga 117126
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>gb|U67252.1|HSPSORD7 Homo sapiens sorbitol dehydrogenase (SORD) pseudogene, exons 8 and 9
          Length = 3394

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 506  gcgttctaaactggaagtgc 525
            ||||||||||||||||||||
Sbjct: 2560 gcgttctaaactggaagtgc 2541
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>gb|AC142263.3| Mus musculus BAC clone RP24-449M10 from 12, complete sequence
          Length = 182060

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 459   gtagacaatgaagacaatgaacaa 482
             |||||||| |||||||||||||||
Sbjct: 75972 gtagacaaagaagacaatgaacaa 75949
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>gb|U67243.1|HSSORD08 Homo sapiens sorbitol dehydrogenase (SORD) gene, exons 8 and 9, and
            complete cds
          Length = 2613

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 506  gcgttctaaactggaagtgc 525
            ||||||||||||||||||||
Sbjct: 1779 gcgttctaaactggaagtgc 1760
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>gb|L29254.1|HUMLI2D06 Human (clone D21-1) L-iditol-2 dehydrogenase gene, exon 9 and
           complete cds
          Length = 1766

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 506 gcgttctaaactggaagtgc 525
           ||||||||||||||||||||
Sbjct: 820 gcgttctaaactggaagtgc 801
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>gb|L29008.1|HUMLI2D Human L-iditol-2 dehydrogenase mRNA, complete cds
          Length = 2519

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 506  gcgttctaaactggaagtgc 525
            ||||||||||||||||||||
Sbjct: 1688 gcgttctaaactggaagtgc 1669
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>gb|U05000.1|CBU05000 Caenorhabditis briggsae CbMyoD (Cbhlh-1) gene, complete cds
          Length = 7692

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 374  gttctctaaccactctctcc 393
            ||||||||||||||||||||
Sbjct: 5029 gttctctaaccactctctcc 5010
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>gb|U07361.1|HSU07361 Homo sapiens sorbitol dehydrogenase gene, complete cds
          Length = 1808

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 506  gcgttctaaactggaagtgc 525
            ||||||||||||||||||||
Sbjct: 1692 gcgttctaaactggaagtgc 1673
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>gb|AC087857.3| Homo sapiens chromosome 3 clone RP11-149E15 map 3p, complete sequence
          Length = 173606

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 667    tctgatacttcaaaacaatc 686
              ||||||||||||||||||||
Sbjct: 155091 tctgatacttcaaaacaatc 155072


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,626,016
Number of Sequences: 3902068
Number of extensions: 5626016
Number of successful extensions: 104228
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104108
Number of HSP's gapped (non-prelim): 120
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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